Gene Symbol |
AKAP6
|
Synonyms |
ADAP100, ADAP6, AKAP100, PRKA6, mAKAP |
Description |
A-kinase anchoring protein 6 |
Transcript |
NM_004274
|
Expression |
|
Putative miRNA Targets on AKAP6 |
|
3'UTR of AKAP6 (miRNA target sites are highlighted) |
>AKAP6|NM_004274|3'UTR
1 AATGTACCCCCTCCCCAAGCATGAAAATCATCTCACTGAAAGATACGCCTGGCTGCAACTCAGGGGTGGCCTCATCCTCC
81 CGCCCTGGGCTGGCCTCTGGTTCCATCACGTTTGTCACTGCCGTTTATTACATTGACTTCTCCCAAGATGAATCTTCCTT
161 CCAAATGTGTTTTCTCCACACAAGCCTTGTGATCTGAATGTGTGCGCTGGTTCTCTTTAGGTGATCGTCTTTGAAGTTCA
241 GCAAA GCTGCTTGTTCTCCCATGGATTCCTGTCCCAAGCTACCTCTACCAACCCTCTCTCTCCAGCTAGACTTTTCTCTT
321 TGCCTCCTCCCTTCCCTTCCACTCTTTAAAGTTCTGCAGTTCACCAACTGGTAGTCCATTAAATTCTCCTGTCTAGAATG
401 ACCCCCCCACCAGTACTTGACCAATTTCATGTATCAATCTGGATTTTTTTTTAACGGTATAATGACTGTGTTTATTGAAA
481 GAGTTTTACCTAAAAAGCCAACATTTGAATTGGTTGCAGCATAGAGAAGAAACACTGGTCCTTCTTTCAAAATTAAGCAA
561 CTATTAAAAGCGCCATTTTATTTATTTCATTTAAAAAATAATCTATGCAGCATTTCAAGAAACAACCATATGGTGTTGTA
641 TATTATAAACTGGTGACATTCTACTATTGAATTATGTACAACATTTTCATTTTTTATGCTTCTTGAGGTGGTAATGAGAA
721 AAAAGTTTTTTAAAAAAGTGTGCCTTGCTGTATTTCTTATACCATTTATTAAAAAGCTGCTTTCACGGTAAAATTATGTT
801 GGTTTGAAAGGAGGAAATAGCAAGGTTAAGATGTGTGAATAATTTCTGTATATATGTATAACCAAGTACAAACATTGATG
881 TATAATGACAGTATAAAATGCTTTCATGTTTGTGATGTCTAGTGATGTGGAAAATATAAGCCTTAAATCCATTAGATTGC
961 ATGGTAATTAAAATTGGCATAATAAACACAGATTATTGGGGGAAAAGGAAAATTAGTGATCTCTTCTACTATGTTCTTTA
1041 CCAAATTGTTGCATCTGGTTCTGAAAAAGTATAGCATGTAGCAGCTTCCAAACATATTCATATTGCTTAAGAGGCTTAAC
1121 ATTACCTAAACTAGAGACTAGACGTAAAGCCTTCAGTTTTCAAAATCTTTCTGGTCACTATAAAGATCTTGGAACAGCAA
1201 ATGATTAAATGTCAGTTCCCCTAAACCAATAAACATTTATACTAGATTTTTTATTTCCACTTATCATTAATGATTTAATG
1281 TTGGATTTCAGGTACCTTGTATGTCTTAATTTATTTTAAATATTTATTTTGAATGAGTTTGATAGAAAGCTAGTAGAAAA
1361 GTACAGAAAATTTGACTATTATTTATAGATTTCAGGTATATTTATATGTGTAAAAGAAATTGACAAAGAAATATTTCATC
1441 TGGCCTTTACTGACTCCTGTTAAATGCAGTTTTAAATTTATATCGTAACACCTACTTAAGTGCCTGACACAGTAGGTATT
1521 CAATAAAAATTTACTGAATTAAAGGATTAAATTAGGTGACATGGTGACATCTATCCCTTTATTTTGACACTAAAACATGG
1601 ACACAACTAGAAAGAGGTACAATGCAATATAAAGTCACAATAGATAATATATATCAAATTTCTAAAAGGTAAAGAATGTT
1681 GTGGGTTCATGCAGTCACAGGAATGACAATCATTCAACAGATAGTTCAGAAACACTTTTTATCTGCAAGGCACTATTCTA
1761 GATCCAGAAGATGCAATGTTGAACAAACAGACAAAGCCCTGCCCTCAGAAGGCTGTCCTGCATTAGGAACAAGTGAACAC
1841 GCAAATGACATGAAGTATTTGTTGCAGAGCTGAGGAACAGAGCAAATGTAGTGATAGAAGCGCAATGAGAGAAGCAGCAG
1921 TGGGTACAAGGAGGAAGAAAAAGGGCTTGCAGAGAGTGGAAAGTTAGTGGAATATTCATGAAACTTCATTGCAGGGGTAA
2001 TAGAAGAAAAAGTAAATTGGGAGGACTTAATGGAAGGTCTTTTAAAAAGTTAACTTGGAGCTTCTGTATGTAAAATGCTA
2081 GGTAATAAGGACACTTTGTACAGGCTGTTTTGCACCTGATTTTATTTATCATTAGTGCCACGCCAAGATCATTTAGACGA
2161 TGCTTATCTGTAATTCTACCACTTTAATAACTATTTGTATTTTTATGCCCCTTCTGATCTTTTCCATATGTATTTCTAAA
2241 TGGATAAATTATTCTAGGCTTCTTAATAGGTAGTAATTTGTTCAAAAGCGGTTTTAGCCAGACATCTAGTTGCAGTGTTC
2321 AAGAGGATTATGGGGGAAAGAGATTAGAGATAATTGTCTAGTTAGGGGGCAGCTGGAGAAAATAAGCTAAGTTTGCAATA
2401 ACAGAGTACACAAGTATAGTGGCCCAGGATGTAGTGAAAGAACAAATCCTAGAGTCTTTGAAATTTCTAAGGGCATTCTA
2481 GACCTCTGTTGGGATATGGTATTATTTTACATACTGACACAACCTAAATTTTCTTTGGGTAGTAACTAATGTCAAGTCTA
2561 CATCGACTGGTAAAACATTCAAAGAACAAACTGACAATGATGTTCTACCTACTTGTTACATGCTCATGGAAGACCGTGCA
2641 GTATTGAAAGTATTTGTTAATTATCTGCTTAGTATTAACACTAAATTTGTAGAATGACTTTCAGGTTTGTTGAACAATGC
2721 CTTTTCAGGTTGGAAGAAGAAAAATAGCCTCAATCTCCCACCCCATGTAGGCACTACCTCCCCAATTACCCTTAGAAAAT
2801 GATCACACCAACTCTGCCTACACACTTCCAGTGATAGTGGCTCATTGTCTGTTAAGGCAAACTGTTCCACTGTTGGGCAT
2881 ATCTCTTTGTTAGAAAGTTCTTTCTTAGGTTGCTAAAATCTGCCTAGTACCCCGCTACCCTGTTCTGTCTTATGGAGCAG
2961 CCCAGATTATCTTTACTCCCTCTTTCTCATGGCAACCCTGAAGATAATCAAGGCCAGTTACTCATCATCTCCCAACCACT
3041 GTTTCCTCAACTGCCCTTCATATGTCATGGTTTTCAGATCCATTCCAACCTGACTGAATGTTAACAGACAGAATTCTTCA
3121 CATTAAGGAACTGTCTTCATCATCATACATGTAGAAAAGAATCTGAACATTTAAGTGCGAAGTTTTCTCTAGAAATATAT
3201 TCAAGATATGTTTATTCTATTATTGTAAATTTCAAACAATAAATAAATAAGAATCCAAAAAAAAAAAAAAAAAAAAAAAA
3281 A
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' gguagaaGGAAGUCGGAg 5'
|||||||::|
Target 5' cgtaaagCCTTCAGTTTt 3'
|
1143 - 1160
|
123.00 |
-13.80 |
2
|
miRNA 3' ggUAGAAG---GAAGUCGgag 5'
:||||: ||||||
Target 5' tcGTCTTTGAAGTTCAGCaaa 3'
|
225 - 245
|
112.00 |
-12.02 |
3
|
miRNA 3' ggUAGAAGGAAG-UCGGAg 5'
|| ||:| || :||||
Target 5' aaATATTTCATCTGGCCTt 3'
|
1429 - 1447
|
112.00 |
-8.90 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|