pre-miRNA Information
pre-miRNA hsa-mir-4436b-1   
Genomic Coordinates chr2: 110086433 - 110086523
Description Homo sapiens miR-4436b-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-4436b-2   
Genomic Coordinates chr2: 110284853 - 110284943
Description Homo sapiens miR-4436b-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4436b-3p
Sequence 60| CAGGGCAGGAAGAAGUGGACAA |81
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs760150076 9 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF185   
Synonyms SCELL
Description zinc finger protein 185 with LIM domain
Transcript NM_001178106   
Other Transcripts NM_001178107 , NM_001178108 , NM_001178109 , NM_001178110 , NM_001178113 , NM_001178115 , NM_007150   
Expression
Putative miRNA Targets on ZNF185
3'UTR of ZNF185
(miRNA target sites are highlighted)
>ZNF185|NM_001178106|3'UTR
   1 CGACCCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTTGCT
  81 GTCTCCCCTTCCCTCACCTCCTCCCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATACATC
 161 CAATATCGTATCTTAATGATGCTATGATAATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATG
 241 ATGTCATTTCAGGCTCAACCAAAGAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAAGACAGATTGGCTTTCTAATGA
 321 GTTTAAGTGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA
 401 TGATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAGCTTGTCTATTTGCCATAT
 481 CTATTTTTTTTAAATTTCCATACACTTGTAAAAGTAGTTAGTTGCTTTTGATTGAGTTATATAGCAGTTTTTCATTTGGT
 561 CTTCCACTCACCTTTCACTATATTTGAGTGTTCCCTTACAGGTATGTTGGCATGTGTTGGAAAATTTACACAATTAGGTT
 641 TAAATTCAGTAGGATGTGATTTTAGGATGCTACTGATCAAAGTGATATCTGTGTCTGTTGGAATCTTGATAGCTGATTAA
 721 TTTGCCCTCAATTCTGCTCCCTGAACTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGTGTATAGATCCCAGCAGGAT
 801 TAAGGAGGTGGAAAAGCAGCTAACATTTCTTGAGGCTCTACCACATAGCAGGCACTGTCACAGAGTAATGGCATTAATCC
 881 CCATAATAATCCTGTGAAGGTGATATTCTCATCCCATCTTAGACATGAGGATATTGGAACTCAGAGAGGTGGCTATTGCA
 961 TTGCGCAGAACGCTACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGCTCAGTGTGT
1041 GCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA
1121 AAGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAATTATCCCCCCCCCCATGAAGTACTTC
1201 AAGGGCCAAGCTGCCCCTTTCCCTCCTCTCCGCCCATGAAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATT
1281 TGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGGAAAAGCTCCAGGGGGCTAGCTGATCTGAGCAGAGAGCTT
1361 TCAGTGACCCATTTTCCTGTCTAGACTCTGCCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAA
1441 CTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTCAGGTTCAGCTGGACTCTGCCAT
1521 CTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCTTAGAGTATTTCTGATACAAAATGAGGGCCTC
1601 TGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCCAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCT
1681 TCCTGCCAAATGATCAGAGAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACACTAAATAC
1761 CAACTGCTCTTCCTCAGCTGTAGTCCCCAACATCAGACTTGGCACGTGGTGGACACTAACACACAGGCACTCAATGAATG
1841 AGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAGGTGCTATCCCTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAA
1921 GGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTTTAAGGGAGTTTTAGAACCAACATGCA
2001 AGACATTGAAAGAAATCTTGCAAGAGCCATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAA
2081 TTTTGCAGATCTGAGGAAGAGGGATGCATTACCTTTTTGCTTCTTTTCAATTGCTTAGTGTTTCTAATCATACTTAATCC
2161 ACACTAATGTGCGCAATTATAATAAATGGTAAGATATCACATGTGTCAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaCAGG-UGAAGAAG------GACGGGAc 5'
            ||:: |:||||||      :|||||| 
Target 5' ctGTTTGATTTCTTCATGCTTTTGCCCTt 3'
109 - 137 146.00 -17.40
2
miRNA  3' aacaGGUGAA--GA-AG------GACGGGAc 5'
              |||:||  || ||      |||||:| 
Target 5' tgacCCATTTTCCTGTCTAGACTCTGCCTTa 3'
1365 - 1395 134.00 -15.50
3
miRNA  3' aaCAGGUGAAGAAGGACGGgac 5'
            | |:  |||||||||||   
Target 5' tgGGCTTGTTCTTCCTGCCaaa 3'
1669 - 1690 132.00 -19.02
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs782139289 5 dbSNP
rs782696269 6 dbSNP
rs1225454484 8 dbSNP
rs781844329 13 dbSNP
rs782645501 22 dbSNP
rs782785210 27 dbSNP
rs990891859 32 dbSNP
rs781857471 38 dbSNP
rs782030104 41 dbSNP
rs782553640 51 dbSNP
rs1440840314 53 dbSNP
rs1369413229 57 dbSNP
rs1023212798 63 dbSNP
rs1323388303 71 dbSNP
rs186930017 73 dbSNP
rs973527953 79 dbSNP
rs1166990077 85 dbSNP
rs1460091284 88 dbSNP
rs1379165154 89 dbSNP
rs558958211 100 dbSNP
rs1453788970 102 dbSNP
rs1251027728 111 dbSNP
rs1180642253 118 dbSNP
rs145477931 120 dbSNP
rs782206050 122 dbSNP
rs191495714 140 dbSNP
rs1194302767 143 dbSNP
rs782040819 149 dbSNP
rs1347326766 165 dbSNP
rs782251617 169 dbSNP
rs1234016492 183 dbSNP
rs1346396578 185 dbSNP
rs1312073939 200 dbSNP
rs782393227 201 dbSNP
rs184059305 210 dbSNP
rs1335869777 219 dbSNP
rs782542231 228 dbSNP
rs900404860 243 dbSNP
rs946641065 245 dbSNP
rs782668562 250 dbSNP
rs1313299561 256 dbSNP
rs1433842100 271 dbSNP
rs1392982735 272 dbSNP
rs147268028 275 dbSNP
rs902317873 276 dbSNP
rs782691369 278 dbSNP
rs1444416364 279 dbSNP
rs1258451551 281 dbSNP
rs782292505 281 dbSNP
rs782017161 300 dbSNP
rs1210684200 310 dbSNP
rs782166162 320 dbSNP
rs999367308 362 dbSNP
rs188697254 365 dbSNP
rs1288554414 374 dbSNP
rs1224834502 387 dbSNP
rs1350571281 397 dbSNP
rs1278509206 400 dbSNP
rs1236208987 406 dbSNP
rs781867871 414 dbSNP
rs782468329 415 dbSNP
rs1413742715 417 dbSNP
rs1373396435 418 dbSNP
rs1299750147 429 dbSNP
rs192827243 443 dbSNP
rs1156939546 445 dbSNP
rs1473807467 453 dbSNP
rs1011904637 465 dbSNP
rs1187542864 470 dbSNP
rs781783537 474 dbSNP
rs1265865995 476 dbSNP
rs782169285 483 dbSNP
rs782458125 488 dbSNP
rs1216946597 509 dbSNP
rs970315487 510 dbSNP
rs1446969381 522 dbSNP
rs1282738552 534 dbSNP
rs1212102782 535 dbSNP
rs782664593 538 dbSNP
rs973598337 539 dbSNP
rs1273193155 540 dbSNP
rs1232313919 552 dbSNP
rs1271785587 554 dbSNP
rs1431156481 555 dbSNP
rs1325834616 559 dbSNP
rs1316165338 585 dbSNP
rs1406981868 595 dbSNP
rs1395322268 597 dbSNP
rs1164233843 611 dbSNP
rs1460131567 617 dbSNP
rs1027871832 620 dbSNP
rs782302064 621 dbSNP
rs111563134 625 dbSNP
rs1187517031 626 dbSNP
rs1475304462 629 dbSNP
rs1240680876 630 dbSNP
rs1201650498 656 dbSNP
rs1469255930 661 dbSNP
rs1273334461 690 dbSNP
rs1212517412 696 dbSNP
rs1332278918 725 dbSNP
rs1274650686 734 dbSNP
rs1214749914 735 dbSNP
rs1338544868 736 dbSNP
rs1268132495 737 dbSNP
rs185460124 745 dbSNP
rs911973900 746 dbSNP
rs1325349763 749 dbSNP
rs1438773025 772 dbSNP
rs140936785 773 dbSNP
rs1171432858 780 dbSNP
rs974754488 783 dbSNP
rs868976517 786 dbSNP
rs1409535291 788 dbSNP
rs41304972 795 dbSNP
rs1174662554 804 dbSNP
rs1455137573 805 dbSNP
rs782251722 821 dbSNP
rs1252888319 832 dbSNP
rs782395387 841 dbSNP
rs923855973 856 dbSNP
rs1192518251 858 dbSNP
rs1466767895 868 dbSNP
rs1234078415 900 dbSNP
rs1204788685 901 dbSNP
rs1436808816 908 dbSNP
rs1270697418 913 dbSNP
rs1236180126 916 dbSNP
rs782356202 927 dbSNP
rs1302607488 937 dbSNP
rs1231940703 942 dbSNP
rs782021662 946 dbSNP
rs1298760117 949 dbSNP
rs1441827197 956 dbSNP
rs1352976527 959 dbSNP
rs182488031 960 dbSNP
rs1435704398 971 dbSNP
rs1394806900 989 dbSNP
rs1172354913 1010 dbSNP
rs1442021217 1012 dbSNP
rs896222458 1030 dbSNP
rs11798516 1047 dbSNP
rs1177263953 1048 dbSNP
rs1480127802 1072 dbSNP
rs1012432037 1076 dbSNP
rs1212510413 1092 dbSNP
rs1485892406 1114 dbSNP
rs1279255792 1127 dbSNP
rs1208657352 1132 dbSNP
rs1318639369 1139 dbSNP
rs1307878519 1143 dbSNP
rs1223265117 1150 dbSNP
rs185010255 1182 dbSNP
rs1295372860 1188 dbSNP
rs1415584364 1200 dbSNP
rs1375231231 1204 dbSNP
rs1311384753 1205 dbSNP
rs782307347 1208 dbSNP
rs1159254680 1216 dbSNP
rs1346307083 1216 dbSNP
rs1418019591 1216 dbSNP
rs782273636 1224 dbSNP
rs73633266 1225 dbSNP
rs1475297480 1226 dbSNP
rs1256612281 1235 dbSNP
rs1185524295 1246 dbSNP
rs1486830627 1247 dbSNP
rs1261219900 1259 dbSNP
rs1214926850 1271 dbSNP
rs1315234504 1274 dbSNP
rs1275062098 1278 dbSNP
rs951002635 1287 dbSNP
rs3827418 1298 dbSNP
rs782130535 1313 dbSNP
rs966257033 1346 dbSNP
rs1288824055 1363 dbSNP
rs782080853 1365 dbSNP
rs1385820981 1366 dbSNP
rs1166448825 1382 dbSNP
rs782725636 1394 dbSNP
rs781967982 1401 dbSNP
rs1416672476 1405 dbSNP
rs9969872 1407 dbSNP
rs922047519 1415 dbSNP
rs1262118423 1424 dbSNP
rs1185863911 1426 dbSNP
rs968000590 1432 dbSNP
rs979467108 1436 dbSNP
rs923844306 1438 dbSNP
rs1214395508 1442 dbSNP
rs935262395 1457 dbSNP
rs1056279546 1464 dbSNP
rs1229831824 1472 dbSNP
rs917717914 1473 dbSNP
rs1308447376 1496 dbSNP
rs1295228282 1504 dbSNP
rs1381077688 1513 dbSNP
rs947921509 1514 dbSNP
rs782700177 1522 dbSNP
rs781895515 1524 dbSNP
rs1045175882 1541 dbSNP
rs1440977728 1544 dbSNP
rs1393038593 1550 dbSNP
rs781851529 1557 dbSNP
rs1463139427 1561 dbSNP
rs1373449675 1571 dbSNP
rs1169475550 1578 dbSNP
rs995127921 1590 dbSNP
rs1396780815 1601 dbSNP
rs1194127404 1603 dbSNP
rs1468114206 1604 dbSNP
rs140582632 1618 dbSNP
rs782783431 1619 dbSNP
rs1197786401 1636 dbSNP
rs1481074022 1639 dbSNP
rs1251169795 1649 dbSNP
rs1225660869 1651 dbSNP
rs1350741861 1655 dbSNP
rs886674580 1667 dbSNP
rs1234151203 1669 dbSNP
rs1369620326 1675 dbSNP
rs879999955 1675 dbSNP
rs1320950149 1680 dbSNP
rs1392833880 1688 dbSNP
rs1005523266 1689 dbSNP
rs1396766711 1695 dbSNP
rs1297436971 1697 dbSNP
rs16996777 1698 dbSNP
rs116032256 1702 dbSNP
rs1453659704 1704 dbSNP
rs5924780 1705 dbSNP
rs73641519 1708 dbSNP
rs968156600 1714 dbSNP
rs1203227011 1722 dbSNP
rs1486876249 1735 dbSNP
rs782424889 1737 dbSNP
rs1343482200 1751 dbSNP
rs1272643377 1758 dbSNP
rs1240531450 1761 dbSNP
rs1336038103 1764 dbSNP
rs782465745 1804 dbSNP
rs1407538660 1818 dbSNP
rs1377058707 1821 dbSNP
rs1313244970 1823 dbSNP
rs1434097628 1828 dbSNP
rs7474161 1833 dbSNP
rs1399940043 1835 dbSNP
rs1160419405 1838 dbSNP
rs1454392592 1841 dbSNP
rs923960327 1861 dbSNP
rs1180297659 1864 dbSNP
rs956708094 1878 dbSNP
rs1258727756 1880 dbSNP
rs992453183 1889 dbSNP
rs781843042 1894 dbSNP
rs1286934970 1910 dbSNP
rs782240963 1911 dbSNP
rs782673636 1911 dbSNP
rs947880033 1912 dbSNP
rs1356968074 1913 dbSNP
rs202187034 1914 dbSNP
rs1338431696 1916 dbSNP
rs919664361 1917 dbSNP
rs1157017648 1918 dbSNP
rs782381572 1918 dbSNP
rs782511607 1919 dbSNP
rs1046817914 1920 dbSNP
rs188007335 1921 dbSNP
rs372513464 1921 dbSNP
rs1273450345 1923 dbSNP
rs1227344350 1930 dbSNP
rs782227791 1964 dbSNP
rs1271658493 1965 dbSNP
rs1431468774 1970 dbSNP
rs1364368037 1991 dbSNP
rs1318670842 2024 dbSNP
rs1443171008 2049 dbSNP
rs1395253729 2066 dbSNP
rs1325520628 2069 dbSNP
rs73633269 2072 dbSNP
rs781929909 2074 dbSNP
rs902132101 2076 dbSNP
rs1475396004 2086 dbSNP
rs1388831872 2096 dbSNP
rs1195992817 2108 dbSNP
rs1469443699 2117 dbSNP
rs1253008983 2118 dbSNP
rs1220392173 2153 dbSNP
rs1449502836 2158 dbSNP
rs996741048 2162 dbSNP
rs1274936492 2177 dbSNP
rs1214911963 2178 dbSNP
rs1341430485 2179 dbSNP
rs1295350343 2183 dbSNP
rs1029191747 2194 dbSNP
rs1236360513 2199 dbSNP
rs1371831095 2200 dbSNP
rs782136187 2202 dbSNP
rs1434664724 2208 dbSNP
rs1356463419 2209 dbSNP
rs12846133 2222 dbSNP
rs1000926081 2223 dbSNP
rs1369054166 2224 dbSNP
rs1031104151 2231 dbSNP
rs956654707 2234 dbSNP
rs782284982 2245 dbSNP
rs1455043093 2251 dbSNP
rs1395223105 2252 dbSNP
rs1190119387 2264 dbSNP
rs1025305439 2268 dbSNP
rs1476861381 2270 dbSNP
rs1234237187 2273 dbSNP
rs1204722833 2279 dbSNP
rs1482626582 2282 dbSNP
rs1272135997 2283 dbSNP
rs1213003270 2287 dbSNP
rs1348496058 2309 dbSNP
rs969364277 2315 dbSNP
rs180922058 2330 dbSNP
rs1217523770 2336 dbSNP
rs1045138 2338 dbSNP
rs1375559642 2347 dbSNP
rs1280389990 2348 dbSNP
rs1409367405 2358 dbSNP
rs919737910 2362 dbSNP
rs1315165422 2369 dbSNP
rs1435961986 2376 dbSNP
rs1359066187 2387 dbSNP
rs1174808432 2400 dbSNP
rs931162490 2401 dbSNP
rs13839 2405 dbSNP
rs1177432796 2420 dbSNP
rs908300690 2423 dbSNP
rs1472050438 2425 dbSNP
rs943697399 2441 dbSNP
rs1249428814 2449 dbSNP
rs11582 2455 dbSNP
rs1485985223 2464 dbSNP
rs1255361063 2467 dbSNP
rs902080185 2471 dbSNP
rs1207883398 2473 dbSNP
rs932274788 2481 dbSNP
rs1284976845 2488 dbSNP
rs1050683190 2496 dbSNP
rs1295544430 2500 dbSNP
rs903992738 2509 dbSNP
rs1001038796 2513 dbSNP
rs1031090933 2523 dbSNP
rs892586142 2525 dbSNP
rs185276465 2531 dbSNP
rs1378841033 2538 dbSNP
rs782053082 2539 dbSNP
rs782715777 2540 dbSNP
rs969814450 2556 dbSNP
rs980629457 2563 dbSNP
rs1159248542 2567 dbSNP
rs556605101 2573 dbSNP
rs952507680 2575 dbSNP
rs782340271 2594 dbSNP
rs1166583492 2596 dbSNP
rs113022437 2597 dbSNP
rs781968972 2599 dbSNP
rs976805844 2606 dbSNP
rs1180058731 2607 dbSNP
rs1486799312 2612 dbSNP
rs1242842903 2618 dbSNP
rs920916107 2620 dbSNP
rs191455028 2630 dbSNP
rs1275310658 2631 dbSNP
rs1234091407 2638 dbSNP
rs1321504938 2639 dbSNP
rs781817973 2645 dbSNP
rs1310960297 2661 dbSNP
rs1216893307 2663 dbSNP
rs1363230815 2677 dbSNP
rs782493120 2686 dbSNP
rs1050631525 2687 dbSNP
rs1385753760 2693 dbSNP
rs1327505027 2700 dbSNP
rs1458043728 2705 dbSNP
rs1367737179 2708 dbSNP
rs1162428455 2717 dbSNP
rs1430279849 2718 dbSNP
rs1390689900 2723 dbSNP
rs925566284 2737 dbSNP
rs1463627379 2738 dbSNP
rs1254899201 2748 dbSNP
rs782116363 2765 dbSNP
rs1488273772 2783 dbSNP
rs1264090433 2788 dbSNP
rs1207035307 2789 dbSNP
rs1052633898 2794 dbSNP
rs1297549134 2797 dbSNP
rs1226746351 2799 dbSNP
rs1362416290 2827 dbSNP
rs1304973528 2839 dbSNP
rs1387061568 2841 dbSNP
rs1389529143 2852 dbSNP
rs1291620546 2853 dbSNP
rs1463354012 2855 dbSNP
rs181694423 2863 dbSNP
rs1013650788 2887 dbSNP
rs1397034524 2889 dbSNP
rs1199673893 2899 dbSNP
rs782193332 2905 dbSNP
rs1265555468 2906 dbSNP
rs201013165 2908 dbSNP
rs1046932752 2912 dbSNP
rs1483605766 2913 dbSNP
rs1274308584 2933 dbSNP
rs1203697752 2934 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aacaggugaagaAGGACGGgac 5'
                      |||||||   
Target 5' ------------UCCUGCCaaa 3'
1 - 10
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000535861.1 | 3UTR | UCCUGCCAAAUGAUCAGAGAGGAACAUUCCAUUUAUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
87 hsa-miR-4436b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066957 ATXN7L3B ataxin 7 like 3B 2 8
MIRT119284 NABP1 nucleic acid binding protein 1 2 6
MIRT128915 KMT2A lysine methyltransferase 2A 2 2
MIRT150116 MIDN midnolin 2 2
MIRT173040 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT253117 BCL2L12 BCL2 like 12 2 2
MIRT256997 RGMB repulsive guidance molecule family member b 2 2
MIRT259746 SNX12 sorting nexin 12 2 2
MIRT267278 TMEM109 transmembrane protein 109 2 2
MIRT441934 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT443625 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT445757 AGO1 argonaute 1, RISC catalytic component 2 2
MIRT447835 CTIF cap binding complex dependent translation initiation factor 2 2
MIRT451230 ZNF444 zinc finger protein 444 2 2
MIRT451966 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT453127 HOXC4 homeobox C4 2 2
MIRT454604 RPL13A ribosomal protein L13a 2 2
MIRT455176 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455547 GJB1 gap junction protein beta 1 2 2
MIRT458197 ATP6V0A2 ATPase H+ transporting V0 subunit a2 2 2
MIRT458356 NOC2L NOC2 like nucleolar associated transcriptional repressor 2 2
MIRT458923 DNM2 dynamin 2 2 2
MIRT461013 SYT7 synaptotagmin 7 2 2
MIRT461643 ZSWIM4 zinc finger SWIM-type containing 4 2 2
MIRT461997 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT462367 BCL7B BCL tumor suppressor 7B 2 2
MIRT464915 TXNIP thioredoxin interacting protein 2 2
MIRT466311 TIMM22 translocase of inner mitochondrial membrane 22 2 2
MIRT466591 TBC1D2B TBC1 domain family member 2B 2 2
MIRT467045 SRSF1 serine and arginine rich splicing factor 1 2 2
MIRT468750 SDC2 syndecan 2 2 2
MIRT468943 RPS24 ribosomal protein S24 2 2
MIRT469474 REEP5 receptor accessory protein 5 2 2
MIRT469913 PTRF caveolae associated protein 1 2 2
MIRT473325 MEX3A mex-3 RNA binding family member A 2 2
MIRT473643 MARK2 microtubule affinity regulating kinase 2 2 2
MIRT474064 LMNB2 lamin B2 2 2
MIRT474357 KMT2D lysine methyltransferase 2D 2 2
MIRT475394 ICMT isoprenylcysteine carboxyl methyltransferase 2 4
MIRT476335 GLTSCR1L BRD4 interacting chromatin remodeling complex associated protein like 2 2
MIRT478651 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT479585 CDC42SE1 CDC42 small effector 1 2 2
MIRT479943 CBX5 chromobox 5 2 2
MIRT482001 AMOTL2 angiomotin like 2 2 2
MIRT482043 AMER1 APC membrane recruitment protein 1 2 2
MIRT483070 EXT2 exostosin glycosyltransferase 2 2 6
MIRT484323 KCNH1 potassium voltage-gated channel subfamily H member 1 2 4
MIRT487528 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT489636 ALS2CL ALS2 C-terminal like 2 2
MIRT490693 SSTR1 somatostatin receptor 1 2 2
MIRT490871 UPK2 uroplakin 2 2 2
MIRT492582 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT492945 NEUROD2 neuronal differentiation 2 2 2
MIRT498675 SOD2 superoxide dismutase 2 2 4
MIRT499349 RAB25 RAB25, member RAS oncogene family 2 2
MIRT502338 GIGYF1 GRB10 interacting GYF protein 1 2 4
MIRT502976 CCNL1 cyclin L1 2 8
MIRT503706 NUP62 nucleoporin 62 2 2
MIRT505567 SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 2 2
MIRT507808 CDKN1B cyclin dependent kinase inhibitor 1B 2 2
MIRT513242 FBXO41 F-box protein 41 2 6
MIRT513586 EVX1 even-skipped homeobox 1 2 2
MIRT525036 FRK fyn related Src family tyrosine kinase 2 2
MIRT531035 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT531939 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT534912 PUM2 pumilio RNA binding family member 2 2 2
MIRT535717 N4BP1 NEDD4 binding protein 1 2 2
MIRT540498 ZMAT4 zinc finger matrin-type 4 2 4
MIRT541465 AURKA aurora kinase A 2 2
MIRT554328 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT561572 SLC6A9 solute carrier family 6 member 9 2 2
MIRT564715 ZNF322P1 zinc finger protein 322 pseudogene 1 2 2
MIRT576176 Hmox1 heme oxygenase 1 2 2
MIRT629712 XKR4 XK related 4 2 2
MIRT636182 THBD thrombomodulin 2 2
MIRT646315 MPHOSPH8 M-phase phosphoprotein 8 2 2
MIRT649174 IQSEC1 IQ motif and Sec7 domain 1 2 2
MIRT666945 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT684057 FOLR1 folate receptor 1 2 2
MIRT687585 MAU2 MAU2 sister chromatid cohesion factor 2 2
MIRT689953 ZNF185 zinc finger protein 185 with LIM domain 2 2
MIRT704071 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT704327 DCUN1D5 defective in cullin neddylation 1 domain containing 5 2 2
MIRT705406 ATP1B3 ATPase Na+/K+ transporting subunit beta 3 2 2
MIRT710488 CDH5 cadherin 5 2 2
MIRT718241 LCE1A late cornified envelope 1A 2 2
MIRT723182 CDCA4 cell division cycle associated 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4436b-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-4436b-3p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)

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