pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol RPF2   
Synonyms BXDC1, bA397G5.4
Description ribosome production factor 2 homolog
Transcript NM_032194   
Expression
Putative miRNA Targets on RPF2
3'UTR of RPF2
(miRNA target sites are highlighted)
>RPF2|NM_032194|3'UTR
   1 TGGAACTTAGCCAGCCACTACTGTTTCATTGTGTTCTACTTAAGAGAATTATCAAGCGTCAATCCATTCAGAGTTTCTTA
  81 TAAGATCTTATTATATATTTTTATAACATGATAATTTTACGATATATTATTATGAACAGTAATATACTAGTATTAAGTGT
 161 AAAGTAAGCCTTTTATTTGAGACATTACACCCTGGTGTGCCATTTTCTCTTGTGATATCCCCTGCCCTCCACAAATTCTT
 241 CTTTCTCATTGGGTGGATGGATGGGTGAGGAGGGATCTCCATAACCATTGGGATTTTTTTGAATTTCTGGCCTTAGCTAA
 321 AGAAAGCCACAGAAAGCCGGACCCGCAGGAGCTGTGTAAACAATCTCAGTATGAATTACCTGGAAAGTTAACCTCCTCTC
 401 CCAACATGGATCTACATTCTGATTTTTATTTTCTACTTTTATTTTGCCTGAAATCCTACTCGTTGACATTTGAGATTTTA
 481 AGCTTTGTGGCTGAAAATATATAGATCTCTGAGAGGGATGTCTGCTATCTGATTATTGATAAATTACACTACTGTTGATT
 561 GTTTTAAGAGACTCTACTACTAAGTAGAGCCCACCCCGCTTCTCTGAGACGAAACCTGTGTTTTTTGGTTGGTTTGTTTT
 641 TAAGAGATGGGGTCTTGTTCTGTCACCTAGGGTGGAGTGCAGTGGCACAATCACAGCTCACTGCAGCCCTGAACTCCTGG
 721 GCTCAAGTAATCCTCCTGCCTGAGCCTCTTACGTAGCTGGGATTACAGGCATGAGCCACTGAGCCCTACTTTTTTTTTTT
 801 AAAGCAATGAGGTCTTGCTGTGTTGCCCAGGCTGGACTCAAATTCCTGGGCTCAAGTGATCCTCCCACTTCACCTTCCTG
 881 AGCAGCCGGAACTACAGATGTTGGTCCACTGCACCTGGCAGAAAAGAAGTTTTGATAGGGGCAGAAATGAAAAAGGAGAA
 961 AACAGGTGAGTTTTAAGGTGCAGGGCACTTTAGGGTACTGGGTAGCCCTAGGTAGCTAAAGGTTGCATGAAGGCCCTGGG
1041 CGTTTGCAGATGGTGTAGAAGCCAGCCAAAGCCTAACTACTTGTTTTGAAAGTTTCTTGAAGACAGGCCTTGTGCCTAGG
1121 AAAACAGAAGCTTTCTTCTTCCTTCTACTAGTATTGCATACTTGTTTTTCTGGAATAGGGTGTTAAGTTCCTTGATTCAG
1201 TCCTTGACAAGGAATCTCCTTTATACAAGTGCCAGTAATGTTGTAAAGGTACAGACATACGCAAATCATAATTTGTTACA
1281 TGAAGTACCAGTGCTTTCTTTTTTGTTGTTTTTTGAGACAGAGTCTCGCTCTGTCGCTCAGGCTGGAGTGCAGTGGCGCG
1361 ATTTCAGTTCACTGCAACCTCCACCTCCCAGGTTCAAGCATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGC
1441 ACCCACCACCACGCCTGGCTGATTTTTTGTAGAGACAGGGTTTCACTTCAATTCCATGTTAGAGAGCTCCGTGCCTGTGT
1521 ATACATGCCTTTATGTAAGCTTGCTCAGCTACAGATCAACAATGCTGGCACTAAGCAAAAGTTCGAGCCTCAGCTTTACC
1601 TTCTACCCTTTCCCTTCTCTTTTGAATCCATTCCTTAGCTTTCCCTAGTCCTCTCCGGATAGCTGTTACTCTCCTCTTGC
1681 CAGAAAAATGAAGGAGCTGGTATCATTTATACTTTTTGTTTGATTATACGTTTAACCAAAGACCATACAGTCTCGTACCT
1761 GAATCAGACATTTGCACTTTATATCTAAATGAGAAGAAGGGGCTCAGATAAGTCGTTTGCTGCCATCTGGAGGTAGATGG
1841 ACAATAGCTGAGAAGGGGAGCCATGAAAAGAACATCAGGAGTGATGGACGCATAGTCCTTCCCCAAAGCCTCGCTCATCA
1921 CTGGTAGGAGGCAAAGCAGTGGGTCCTCCTCACCAGCCGCTTACGGGACCCTGCCATGCCTGGACCCCTCTATCAGGAAG
2001 ACCTACCCCAGCACTACTGGAAAATCAGCCAATCTTAACCCAAAGATGGCCATGATTTCTGTATGTGAGACGTCTTAAGG
2081 GTGTTTTTGTTTGTTTTAATCAGCCCTCTTGTTTGAGATTTGGCAATACATTTCTGTTTTCTAGGTAATTTCTGTGTCTG
2161 ATGGTAGAGGATCTAATAAGTATTGGAATGCTTCCTATTTGCTGATAGAAGTACCAAATAGTATTATTGAAGTCTAACAA
2241 AGACTTTTTGTTGAGAACACCTTGTAGTGTTGTACTATCTGGAACTCTTGAGCTGCCATTTATATCACTTTTTGTGGAGA
2321 GCACATCTTGATTTTCAGTTGTCCTTACTTTAGAATACAACACACATAAATTGGAGACTATGTATTCATTTCAATGGAGG
2401 TGGTAAATTGCCTGTTTTAAGTTTTACTTAATGTTGGGTTTTGGTAGATGAGGAAAGCATTTTGGTTATTTGTTTTGTTT
2481 TAAATACCAAATTTCTTATATTTTTTCTGGAATATTAATACTATTACCAAGCTATTATTTCATGGAATTTGGGTTTCTTT
2561 TTTTTTGTTTTTTTAAAATTAAGTGCTGTTTGTTTTCTTGGTTATTGAACATAATCCAAAGTAGAGATGTTATTACTCAA
2641 TTCAAGAAAAGAAAGGGCTAATAAAACTTAACTTCAAGTCAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gguAGAAG--GAAGUCGGAg 5'
             |||||  | ||||||| 
Target 5' catTCTTCTGCCTCAGCCTc 3'
1399 - 1418 157.00 -18.30
2
miRNA  3' gguagAAG---GAAGUCGGAg 5'
               |||   | |||||:| 
Target 5' aaaagTTCGAGCCTCAGCTTt 3'
1577 - 1597 129.00 -10.70
3
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||| ||||   | ||||| 
Target 5' taATCCTCCTGCCTGAGCCTc 3'
728 - 748 128.00 -17.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN28201772 9 COSMIC
COSN28755872 11 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs753984892 1 dbSNP
rs757332134 2 dbSNP
rs746641749 3 dbSNP
rs750665646 4 dbSNP
rs770520918 4 dbSNP
rs780508891 5 dbSNP
rs747316349 6 dbSNP
rs781764275 7 dbSNP
rs748602874 8 dbSNP
rs769446754 9 dbSNP
rs770464596 10 dbSNP
rs759245099 11 dbSNP
rs776032814 11 dbSNP
rs1197648306 15 dbSNP
rs370901999 16 dbSNP
rs775418739 17 dbSNP
rs1022399721 21 dbSNP
rs796239134 21 dbSNP
rs1044387 22 dbSNP
rs1044388 24 dbSNP
rs1324135208 26 dbSNP
rs750471844 29 dbSNP
rs1269245364 30 dbSNP
rs1031152618 32 dbSNP
rs758698420 33 dbSNP
rs759015128 37 dbSNP
rs1219455913 38 dbSNP
rs960943501 39 dbSNP
rs992404940 47 dbSNP
rs188461842 57 dbSNP
rs980230953 58 dbSNP
rs1044389 59 dbSNP
rs532316758 61 dbSNP
rs1285444506 63 dbSNP
rs1388245880 68 dbSNP
rs767631360 70 dbSNP
rs899824471 74 dbSNP
rs1297434620 80 dbSNP
rs1442811122 91 dbSNP
rs1047590216 92 dbSNP
rs1173632032 97 dbSNP
rs1468841554 102 dbSNP
rs1381798265 104 dbSNP
rs552403831 107 dbSNP
rs1159668248 108 dbSNP
rs944571127 109 dbSNP
rs1027417238 112 dbSNP
rs147058039 121 dbSNP
rs983299942 122 dbSNP
rs1459477361 127 dbSNP
rs1295816253 156 dbSNP
rs774882337 160 dbSNP
rs1461844788 162 dbSNP
rs1257940712 170 dbSNP
rs1237116867 172 dbSNP
rs537641746 176 dbSNP
rs1306010129 179 dbSNP
rs1044148217 185 dbSNP
rs960232480 187 dbSNP
rs1329538064 192 dbSNP
rs1334629551 195 dbSNP
rs1451221139 197 dbSNP
rs993069669 203 dbSNP
rs916129884 213 dbSNP
rs1406131553 219 dbSNP
rs903919753 223 dbSNP
rs948987202 224 dbSNP
rs1000058466 226 dbSNP
rs191536549 227 dbSNP
rs1160204994 236 dbSNP
rs1441943821 236 dbSNP
rs1251518785 243 dbSNP
rs373524862 244 dbSNP
rs980441647 249 dbSNP
rs1031121471 250 dbSNP
rs924955722 253 dbSNP
rs896667631 271 dbSNP
rs936423792 277 dbSNP
rs1023854892 280 dbSNP
rs979773585 290 dbSNP
rs1027770358 303 dbSNP
rs555097785 311 dbSNP
rs1052162334 319 dbSNP
rs1312695432 328 dbSNP
rs1246822592 339 dbSNP
rs138419581 340 dbSNP
rs183916421 345 dbSNP
rs576614022 346 dbSNP
rs397886707 348 dbSNP
rs1380030655 350 dbSNP
rs907668684 352 dbSNP
rs187106213 355 dbSNP
rs1421863918 358 dbSNP
rs61153470 362 dbSNP
rs975970920 369 dbSNP
rs1370770837 375 dbSNP
rs921860777 387 dbSNP
rs1191035093 393 dbSNP
rs1428013108 394 dbSNP
rs1262641661 395 dbSNP
rs1026972647 396 dbSNP
rs761579417 402 dbSNP
rs1004297757 407 dbSNP
rs76565923 410 dbSNP
rs1221552718 417 dbSNP
rs1356876691 418 dbSNP
rs1015718738 423 dbSNP
rs1167467076 434 dbSNP
rs397715841 436 dbSNP
rs60209136 436 dbSNP
rs71679115 437 dbSNP
rs1343318045 441 dbSNP
rs201298364 442 dbSNP
rs1405942322 461 dbSNP
rs935385787 462 dbSNP
rs960117989 463 dbSNP
rs559212692 466 dbSNP
rs1373690739 468 dbSNP
rs774402265 469 dbSNP
rs896629709 479 dbSNP
rs1268536735 488 dbSNP
rs1168704030 497 dbSNP
rs1452016509 500 dbSNP
rs970308707 502 dbSNP
rs1402714256 510 dbSNP
rs1447724112 521 dbSNP
rs759854900 522 dbSNP
rs979454681 524 dbSNP
rs1302493575 528 dbSNP
rs1376652056 545 dbSNP
rs1282302288 551 dbSNP
rs1437599640 555 dbSNP
rs1024247517 556 dbSNP
rs924956736 559 dbSNP
rs905439613 560 dbSNP
rs1401671139 562 dbSNP
rs957984880 569 dbSNP
rs1027286497 579 dbSNP
rs1216247062 580 dbSNP
rs1177474279 582 dbSNP
rs1479147183 584 dbSNP
rs559284372 598 dbSNP
rs767657618 599 dbSNP
rs987842563 601 dbSNP
rs1437091761 603 dbSNP
rs913620301 608 dbSNP
rs75831711 611 dbSNP
rs1040826551 612 dbSNP
rs1459625481 613 dbSNP
rs1262085789 621 dbSNP
rs1014697155 627 dbSNP
rs965816307 628 dbSNP
rs1278083051 629 dbSNP
rs1235405689 632 dbSNP
rs1426252212 633 dbSNP
rs760844967 636 dbSNP
rs1312162248 641 dbSNP
rs932566954 651 dbSNP
rs1450506770 653 dbSNP
rs1416754129 660 dbSNP
rs368819401 662 dbSNP
rs1048829874 663 dbSNP
rs1257478443 681 dbSNP
rs1477815278 691 dbSNP
rs1416325356 695 dbSNP
rs931910945 703 dbSNP
rs888443811 719 dbSNP
rs541343933 722 dbSNP
rs1425787826 726 dbSNP
rs3851221 738 dbSNP
rs935346481 739 dbSNP
rs374913238 753 dbSNP
rs1052413635 754 dbSNP
rs1241927639 762 dbSNP
rs917981776 766 dbSNP
rs949510952 768 dbSNP
rs1045226021 773 dbSNP
rs1204897608 779 dbSNP
rs1037035460 780 dbSNP
rs113875773 790 dbSNP
rs1244356620 790 dbSNP
rs397945985 790 dbSNP
rs895878568 792 dbSNP
rs1014362324 798 dbSNP
rs1357689644 801 dbSNP
rs1023122769 802 dbSNP
rs1450375579 803 dbSNP
rs1323721821 821 dbSNP
rs905365186 826 dbSNP
rs1317960432 839 dbSNP
rs1418829893 841 dbSNP
rs1360883502 842 dbSNP
rs1303278615 847 dbSNP
rs1339738423 851 dbSNP
rs1422602709 862 dbSNP
rs143989415 865 dbSNP
rs1181927958 873 dbSNP
rs1473522804 887 dbSNP
rs191261683 888 dbSNP
rs1033713741 889 dbSNP
rs1191977584 890 dbSNP
rs956299009 895 dbSNP
rs1288526596 896 dbSNP
rs1280021499 899 dbSNP
rs987728209 901 dbSNP
rs1220725660 904 dbSNP
rs995732466 904 dbSNP
rs754455090 912 dbSNP
rs1230077912 914 dbSNP
rs1337573490 915 dbSNP
rs1269701134 920 dbSNP
rs1049138960 921 dbSNP
rs1342620250 924 dbSNP
rs1340553557 932 dbSNP
rs1218182961 933 dbSNP
rs1299806361 934 dbSNP
rs1402937331 937 dbSNP
rs1349210112 949 dbSNP
rs1165449856 954 dbSNP
rs1276032414 955 dbSNP
rs1407045896 957 dbSNP
rs530150294 967 dbSNP
rs1004539744 975 dbSNP
rs184502850 979 dbSNP
rs1264966440 986 dbSNP
rs1281426344 987 dbSNP
rs965783562 992 dbSNP
rs545124488 993 dbSNP
rs1224373180 1002 dbSNP
rs1272302982 1003 dbSNP
rs1028793285 1006 dbSNP
rs1219403920 1006 dbSNP
rs1281673871 1007 dbSNP
rs1221435030 1012 dbSNP
rs1192083533 1018 dbSNP
rs1266007502 1024 dbSNP
rs1293919556 1030 dbSNP
rs976931319 1042 dbSNP
rs75844616 1043 dbSNP
rs3908911 1046 dbSNP
rs925178138 1067 dbSNP
rs750773052 1068 dbSNP
rs1173859014 1069 dbSNP
rs1432265185 1072 dbSNP
rs1426248455 1078 dbSNP
rs1435188261 1080 dbSNP
rs1479943702 1082 dbSNP
rs1238167217 1088 dbSNP
rs1199328319 1090 dbSNP
rs147310274 1092 dbSNP
rs1177070461 1093 dbSNP
rs190460044 1098 dbSNP
rs1417666221 1099 dbSNP
rs1203218122 1100 dbSNP
rs1299907656 1102 dbSNP
rs1313011049 1103 dbSNP
rs1301637071 1104 dbSNP
rs988098405 1108 dbSNP
rs917947555 1112 dbSNP
rs1361135232 1113 dbSNP
rs138897816 1123 dbSNP
rs1435124377 1126 dbSNP
rs1272632784 1127 dbSNP
rs1369121779 1134 dbSNP
rs909749686 1135 dbSNP
rs926786937 1137 dbSNP
rs1359382761 1143 dbSNP
rs1178676724 1148 dbSNP
rs931487759 1152 dbSNP
rs182219629 1158 dbSNP
rs1037004305 1160 dbSNP
rs1288749429 1170 dbSNP
rs1241291630 1171 dbSNP
rs371022111 1173 dbSNP
rs887341055 1174 dbSNP
rs1258046653 1181 dbSNP
rs115296898 1196 dbSNP
rs1014331238 1197 dbSNP
rs1036022630 1199 dbSNP
rs901518101 1200 dbSNP
rs1312190837 1213 dbSNP
rs1395007555 1214 dbSNP
rs185154744 1220 dbSNP
rs906026256 1223 dbSNP
rs1451221661 1226 dbSNP
rs373700377 1230 dbSNP
rs1191952433 1236 dbSNP
rs59695416 1238 dbSNP
rs778730654 1239 dbSNP
rs1437556115 1246 dbSNP
rs1160306089 1249 dbSNP
rs1186914305 1251 dbSNP
rs1424522699 1259 dbSNP
rs1258492395 1260 dbSNP
rs553827448 1261 dbSNP
rs376079976 1262 dbSNP
rs1262127688 1267 dbSNP
rs1321509237 1272 dbSNP
rs748121259 1273 dbSNP
rs1263667519 1281 dbSNP
rs74295741 1285 dbSNP
rs769456726 1291 dbSNP
rs1321756769 1292 dbSNP
rs539400457 1299 dbSNP
rs9400457 1300 dbSNP
rs917875461 1318 dbSNP
rs576027637 1321 dbSNP
rs772273877 1324 dbSNP
rs965053817 1328 dbSNP
rs976520345 1329 dbSNP
rs1028453594 1331 dbSNP
rs1168440552 1332 dbSNP
rs1477577747 1334 dbSNP
rs926689267 1336 dbSNP
rs544883378 1337 dbSNP
rs189018441 1338 dbSNP
rs1265043744 1340 dbSNP
rs909728280 1341 dbSNP
rs1209118495 1358 dbSNP
rs181693475 1359 dbSNP
rs149418822 1360 dbSNP
rs940222216 1361 dbSNP
rs185695566 1368 dbSNP
rs1278498710 1369 dbSNP
rs1214451834 1372 dbSNP
rs901485732 1374 dbSNP
rs1329669210 1376 dbSNP
rs1237795954 1377 dbSNP
rs1323334265 1379 dbSNP
rs1456654819 1380 dbSNP
rs1180756984 1382 dbSNP
rs950067031 1385 dbSNP
rs1233174302 1391 dbSNP
rs764090563 1396 dbSNP
rs117903329 1397 dbSNP
rs1465217244 1399 dbSNP
rs1424569509 1400 dbSNP
rs1173047502 1401 dbSNP
rs1415931520 1417 dbSNP
rs888857390 1419 dbSNP
rs905904699 1420 dbSNP
rs1197912981 1421 dbSNP
rs1405417301 1422 dbSNP
rs1269449080 1436 dbSNP
rs1196184183 1441 dbSNP
rs1169428161 1442 dbSNP
rs1258179507 1447 dbSNP
rs1397660599 1448 dbSNP
rs1448461633 1453 dbSNP
rs113591694 1454 dbSNP
rs545770600 1462 dbSNP
rs1055004753 1465 dbSNP
rs1032101401 1477 dbSNP
rs892302614 1478 dbSNP
rs1447792366 1480 dbSNP
rs1401066670 1488 dbSNP
rs1333465336 1490 dbSNP
rs1009414875 1492 dbSNP
rs1401850575 1492 dbSNP
rs1171770611 1502 dbSNP
rs764338034 1503 dbSNP
rs1010441717 1511 dbSNP
rs757114726 1512 dbSNP
rs562515991 1514 dbSNP
rs1233962921 1518 dbSNP
rs1257437183 1525 dbSNP
rs531517873 1527 dbSNP
rs1316147853 1528 dbSNP
rs1200714535 1534 dbSNP
rs1440328444 1536 dbSNP
rs1033726075 1541 dbSNP
rs1273996533 1550 dbSNP
rs1441605824 1552 dbSNP
rs1284356961 1555 dbSNP
rs548033931 1556 dbSNP
rs561780881 1560 dbSNP
rs1311551945 1561 dbSNP
rs1445984738 1563 dbSNP
rs984214576 1570 dbSNP
rs1416409872 1571 dbSNP
rs1376998033 1573 dbSNP
rs1156627736 1582 dbSNP
rs953898470 1585 dbSNP
rs908672999 1586 dbSNP
rs983914486 1590 dbSNP
rs1159914642 1601 dbSNP
rs1016760087 1608 dbSNP
rs1236421548 1611 dbSNP
rs961239627 1615 dbSNP
rs1443803924 1619 dbSNP
rs765691859 1620 dbSNP
rs976974793 1620 dbSNP
rs115701835 1625 dbSNP
rs1170888426 1630 dbSNP
rs1401116648 1633 dbSNP
rs1355035217 1644 dbSNP
rs369545270 1648 dbSNP
rs758703034 1651 dbSNP
rs570503183 1652 dbSNP
rs9400458 1653 dbSNP
rs980489483 1657 dbSNP
rs927331375 1658 dbSNP
rs1338718024 1660 dbSNP
rs1296108256 1661 dbSNP
rs1399225835 1665 dbSNP
rs936073251 1671 dbSNP
rs1342649334 1672 dbSNP
rs1403560950 1673 dbSNP
rs1053486160 1677 dbSNP
rs765999239 1685 dbSNP
rs375465373 1687 dbSNP
rs1054507859 1692 dbSNP
rs1009341406 1700 dbSNP
rs1421097515 1701 dbSNP
rs1193369847 1702 dbSNP
rs1278152064 1713 dbSNP
rs891953992 1717 dbSNP
rs1488846292 1721 dbSNP
rs1265835337 1726 dbSNP
rs1219942151 1730 dbSNP
rs148603510 1731 dbSNP
rs1024789524 1739 dbSNP
rs1040521945 1749 dbSNP
rs549816391 1750 dbSNP
rs996454304 1752 dbSNP
rs1316275471 1755 dbSNP
rs79935185 1756 dbSNP
rs570132628 1762 dbSNP
rs1005711593 1768 dbSNP
rs7773288 1770 dbSNP
rs574976303 1771 dbSNP
rs1434132533 1775 dbSNP
rs755818403 1776 dbSNP
rs961124711 1777 dbSNP
rs1323630819 1780 dbSNP
rs993964923 1786 dbSNP
rs1215760487 1791 dbSNP
rs1462606316 1792 dbSNP
rs1397638377 1796 dbSNP
rs1024165154 1797 dbSNP
rs1169468319 1798 dbSNP
rs971693778 1802 dbSNP
rs1477955522 1807 dbSNP
rs1422022447 1811 dbSNP
rs1189844041 1812 dbSNP
rs984183319 1815 dbSNP
rs534391937 1816 dbSNP
rs1215608644 1826 dbSNP
rs1456531954 1839 dbSNP
rs1257535761 1843 dbSNP
rs1199445592 1844 dbSNP
rs927282019 1845 dbSNP
rs961476036 1846 dbSNP
rs79839475 1848 dbSNP
rs1478504519 1851 dbSNP
rs976914182 1861 dbSNP
rs1443055876 1868 dbSNP
rs577290773 1879 dbSNP
rs559039642 1882 dbSNP
rs1465757482 1885 dbSNP
rs913277709 1886 dbSNP
rs954404360 1886 dbSNP
rs946153012 1890 dbSNP
rs1040490971 1891 dbSNP
rs923492107 1893 dbSNP
rs190410261 1902 dbSNP
rs1050739966 1913 dbSNP
rs936353861 1923 dbSNP
rs180703278 1924 dbSNP
rs1298097666 1926 dbSNP
rs562554064 1933 dbSNP
rs889442834 1943 dbSNP
rs1005185242 1945 dbSNP
rs1359225241 1947 dbSNP
rs1038044284 1952 dbSNP
rs748769119 1959 dbSNP
rs993933698 1960 dbSNP
rs1207721666 1961 dbSNP
rs913636618 1965 dbSNP
rs1279096381 1968 dbSNP
rs1236327263 1970 dbSNP
rs867583612 1972 dbSNP
rs1307890419 1973 dbSNP
rs1046207516 1976 dbSNP
rs1231257872 1977 dbSNP
rs576022337 1979 dbSNP
rs1276865322 1981 dbSNP
rs1001849143 1988 dbSNP
rs1446872113 1990 dbSNP
rs1360059171 1991 dbSNP
rs1348269071 1992 dbSNP
rs1239221407 1996 dbSNP
rs879430189 1997 dbSNP
rs1380290824 1999 dbSNP
rs1002493953 2007 dbSNP
rs1159310803 2008 dbSNP
rs541760968 2009 dbSNP
rs1283760869 2019 dbSNP
rs1254207755 2031 dbSNP
rs1034234713 2033 dbSNP
rs561997484 2043 dbSNP
rs1265973489 2055 dbSNP
rs1257880268 2059 dbSNP
rs1212839399 2065 dbSNP
rs1351401573 2072 dbSNP
rs888418033 2073 dbSNP
rs1239096068 2074 dbSNP
rs990086208 2078 dbSNP
rs1318153868 2082 dbSNP
rs1309979529 2084 dbSNP
rs913248290 2086 dbSNP
rs1227321266 2108 dbSNP
rs1200485738 2115 dbSNP
rs1379531911 2120 dbSNP
rs1395354832 2125 dbSNP
rs866223279 2131 dbSNP
rs1454955026 2136 dbSNP
rs1398597211 2141 dbSNP
rs1005543823 2142 dbSNP
rs777579247 2148 dbSNP
rs1299301716 2149 dbSNP
rs1455827311 2152 dbSNP
rs1408070687 2155 dbSNP
rs1366736640 2164 dbSNP
rs1164176482 2179 dbSNP
rs1424609339 2181 dbSNP
rs768206305 2182 dbSNP
rs1015640353 2184 dbSNP
rs967421347 2195 dbSNP
rs779376734 2198 dbSNP
rs923432759 2199 dbSNP
rs1263164496 2202 dbSNP
rs932204153 2203 dbSNP
rs1243508805 2208 dbSNP
rs1335054583 2212 dbSNP
rs146211586 2218 dbSNP
rs1216446778 2219 dbSNP
rs1340242017 2219 dbSNP
rs954254870 2224 dbSNP
rs986087140 2225 dbSNP
rs547590719 2226 dbSNP
rs909426820 2228 dbSNP
rs1293000758 2240 dbSNP
rs1458518968 2243 dbSNP
rs1396916976 2245 dbSNP
rs371362891 2245 dbSNP
rs540884861 2245 dbSNP
rs942280200 2259 dbSNP
rs374614274 2262 dbSNP
rs1038016080 2265 dbSNP
rs1306734342 2268 dbSNP
rs749057250 2271 dbSNP
rs1430228576 2278 dbSNP
rs929694008 2293 dbSNP
rs1045516721 2296 dbSNP
rs906953043 2297 dbSNP
rs139241167 2299 dbSNP
rs1034612992 2305 dbSNP
rs893024847 2315 dbSNP
rs1353614154 2318 dbSNP
rs1162676229 2319 dbSNP
rs913605371 2323 dbSNP
rs1196304525 2324 dbSNP
rs1316928137 2326 dbSNP
rs945094771 2328 dbSNP
rs1329832855 2348 dbSNP
rs1301229619 2356 dbSNP
rs1253230560 2359 dbSNP
rs1442323587 2364 dbSNP
rs1373223658 2365 dbSNP
rs1457084255 2370 dbSNP
rs1176413405 2371 dbSNP
rs1236664940 2373 dbSNP
rs1401375516 2379 dbSNP
rs1465234867 2379 dbSNP
rs758163410 2379 dbSNP
rs1011477022 2380 dbSNP
rs372539304 2382 dbSNP
rs1160408589 2397 dbSNP
rs1198028665 2404 dbSNP
rs1020222805 2411 dbSNP
rs553384011 2412 dbSNP
rs386704834 2413 dbSNP
rs78064710 2414 dbSNP
rs144045995 2415 dbSNP
rs1395478412 2426 dbSNP
rs1055398161 2435 dbSNP
rs1343258296 2448 dbSNP
rs1255793116 2449 dbSNP
rs535434134 2453 dbSNP
rs548635285 2458 dbSNP
rs1391806008 2459 dbSNP
rs376018141 2461 dbSNP
rs1446199630 2466 dbSNP
rs1331089389 2469 dbSNP
rs909386671 2469 dbSNP
rs1326834053 2473 dbSNP
rs942248908 2483 dbSNP
rs1394536231 2489 dbSNP
rs1311877710 2493 dbSNP
rs1399725264 2496 dbSNP
rs1172790884 2497 dbSNP
rs1036997907 2499 dbSNP
rs1156279528 2500 dbSNP
rs1232980049 2501 dbSNP
rs1438579378 2501 dbSNP
rs150971389 2531 dbSNP
rs1246332043 2532 dbSNP
rs1255827655 2533 dbSNP
rs918256023 2544 dbSNP
rs1273209832 2556 dbSNP
rs1240103115 2558 dbSNP
rs1284557277 2558 dbSNP
rs897158911 2558 dbSNP
rs929592592 2559 dbSNP
rs1281366390 2566 dbSNP
rs1242800872 2567 dbSNP
rs1312036255 2568 dbSNP
rs998247191 2568 dbSNP
rs534201714 2576 dbSNP
rs1045811254 2584 dbSNP
rs906925659 2587 dbSNP
rs937100249 2589 dbSNP
rs185968307 2599 dbSNP
rs1408002217 2601 dbSNP
rs1007038788 2607 dbSNP
rs1471602500 2608 dbSNP
rs1367585077 2610 dbSNP
rs1189058183 2614 dbSNP
rs1033636574 2620 dbSNP
rs892994803 2634 dbSNP
rs776810843 2635 dbSNP
rs1178182860 2637 dbSNP
rs1020193313 2639 dbSNP
rs1448091017 2652 dbSNP
rs1286427759 2655 dbSNP
rs1208200263 2657 dbSNP
rs1355877469 2663 dbSNP
rs1294175711 2665 dbSNP
rs10434875 2667 dbSNP
rs1357071015 2668 dbSNP
rs78862351 2677 dbSNP
rs1429858421 2682 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguAGAAG--GAAGUCGGAg 5'
             |||||  | ||||||| 
Target 5' cauUCUUCUGCCUCAGCCUc 3'
2 - 21
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000441448.2 | 3UTR | GCAUUCUUCUGCCUCAGCCUCCCGAGUAGCUGGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

Error report submission