pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF589   
Synonyms SZF1
Description zinc finger protein 589
Transcript NM_016089   
Expression
Putative miRNA Targets on ZNF589
3'UTR of ZNF589
(miRNA target sites are highlighted)
>ZNF589|NM_016089|3'UTR
   1 GGCCGAGGCTTTGTAAGGAGATCATGTCTCAACACACACCAGAGGATACATTCAGATGAGAAGCCTTTTGTTTGCAGAGA
  81 GTGTGGGCGAGGCTTTCGTGCTAAATCAACTCTCCTCCTACACCAGTGGACACATTCAGAGGTGAAACCTCACGTGTGTG
 161 AGGAGTGTGGGCATGGATTTAGCCAGAAGTCGTCGCTCAAATCACATCGGAGAACACACTCAGGGGAGAAGCCTTATGTG
 241 TGTGGGGAATGTGGGCGGGGATTTAGCCGGAGGATAGTCCTCAATGGACACTGGAGGACACACACGGGAGAGAAGCCTTA
 321 CACGTGCTTTGAGTGTGGGCGAAACTTTAGCCTCAAGTCCGCTCTTAGTGTACATCAGAGGATACACTCTGGGGAGAAGC
 401 CTTATGCATGCACGGAGTGTGGGCAAGGCTTTATCACGAAATCACAGCTCATCAGACACCAGAGGACACACACAGGAGAA
 481 AAGCCTTATGTCTGCGGAGAGTGTGGGCGAGGCTTTATAGCTCAGTCAACCCTCCACTACCACCGGAGTACACACTCCAA
 561 GGAAAAACCTTATGTGTGCAGCCAGTGTGGGCGAGGCTTTTGTGATAAATCAACTCTCCTCGCACACGAGCAGACACATT
 641 CAGGGGAGAAGCCTTATGTGTGTGGGGAATGTGGGCGGGGATTTGGCCGGAAGATACTCCTCAACAGACACTGGAGGACA
 721 CACACAGGAGAGAAACCTTACGCATGCATCGAGTGTGGGCGAAACTTTAGCCACAAGTCCACTCTCAGCTTACATCAGAG
 801 GATACACTCGGGGGAGAAGCCTTATGCATGCGTGGAGTGTGGGCAAAGCTTTAGGAGAAAGTCACAGCTCATCATACACC
 881 AGAAGATACACTCGGGGAAAAGCTTTAGAGGTGCAAGGAGTGAGGATGTGATTTTAGCAACAAGTCAGCCATCAGCCACA
 961 CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCATTACTTGTCACG
1041 TGTCAGAGGACACACTCGGGAGAAACCTTCATGGAGTGAGAGTAAGGTGTTGGCTGGAAGTGGCCCCTTAAGAGATACTT
1121 GGAGTCAAATCTATCCACTGTACGCCCACCCCACTCTTGTTCTAAGAGCTTTGGGGACAGTCTTTTGACCCCTTACATTC
1201 CTTTAGATGTGAAGATGACAGAGATCTAACTTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTTGGAGGAATGGTCTTT
1281 GCATCTGACTACTTCCTTCTGCAACTGTGTTCTTCCATTAGCTTCCATGACACTCTCCTGCTTTATTTTTTTCTACATCT
1361 CTAGCCTTTGCTGTTTCCTCTCCTACCCCACCTTTAGATTTTACTCAGAGTTCAGTCTCCAGCCCTACAATCTGAGGGAC
1441 ACCTTTACCAGGTCCCCTTCCTAACCCTCCAGTCCCAAATCCAAGATTCTTTAACCACACTCTAAAAGTTCTTCAGACTC
1521 AGGACTTAAACATAGCCACGCCACCTTGGCCTTCAATGACAGGGATCTAGCAATGCTGCATCATCAGCCTTCCAATACCA
1601 GGTTTAAGGGTATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAGCCATGCTCGGGTGGCT
1681 AAATTACATCCAGGAATGGTGCCAGGGCCTTTAGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCT
1761 GACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATACCCTGTGTCAATGAGTGTACCTTGGAGAGCTATC
1841 CACTCAGGCCCCAGTGCCTCTATTTGCTAAGGGACTCTGCCACAGAAAAGAAGGGGAGAGATGTTCATGTAACCTCAAAA
1921 TACTTAGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATGGCTGGTCCAGAGGCTTTTGTC
2001 CACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGGAATCCCCAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTG
2081 GAATGTAGGATCTCCCCCATGCCTGGCCTACCACCCTAATGTGTCTGGAATTGGTGGGTTCTTGGTCTTGCTGACTTCAA
2161 GAATGAAGCCGTGGACCCTCACGGTGAGTGTTACAATTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUA-GAAG--GAAGUCGGAg 5'
            || || |  | ||||||| 
Target 5' caATGCTGCATCATCAGCCTt 3'
1571 - 1591 146.00 -12.40
2
miRNA  3' gguAGAAGGAAGUCGGAg 5'
             |||||| |:|||:| 
Target 5' tgtTCTTCCATTAGCTTc 3'
1308 - 1325 135.00 -16.70
3
miRNA  3' gguagaagGAAGUCGGAg 5'
                  |||:||||| 
Target 5' gggcgaaaCTTTAGCCTc 3'
337 - 354 134.00 -15.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30527927 5 COSMIC
COSN24395393 23 COSMIC
COSN18728059 44 COSMIC
COSN30511172 45 COSMIC
COSN30628167 47 COSMIC
COSN17670028 80 COSMIC
COSN30147783 90 COSMIC
COSN30519878 106 COSMIC
COSN7699648 128 COSMIC
COSN30109226 145 COSMIC
COSN30147780 145 COSMIC
COSN30508840 193 COSMIC
COSN30100606 221 COSMIC
COSN23962684 266 COSMIC
COSN14068560 341 COSMIC
COSN31505649 410 COSMIC
COSN14068561 438 COSMIC
COSN28886005 448 COSMIC
COSN30482297 460 COSMIC
COSN30153260 463 COSMIC
COSN31598262 496 COSMIC
COSN14068563 503 COSMIC
COSN30148259 510 COSMIC
COSN30172642 510 COSMIC
COSN30148114 520 COSMIC
COSN7762699 539 COSMIC
COSN31594474 550 COSMIC
COSN31539747 559 COSMIC
COSN31592718 560 COSMIC
COSN30185916 563 COSMIC
COSN30109587 565 COSMIC
COSN30109554 568 COSMIC
COSN30494002 570 COSMIC
COSN30494086 591 COSMIC
COSN30107953 602 COSMIC
COSN30107952 606 COSMIC
COSN7762700 614 COSMIC
COSN30175914 678 COSMIC
COSN31577652 713 COSMIC
COSN31565449 727 COSMIC
COSN30100622 730 COSMIC
COSN31814682 742 COSMIC
COSN31538071 743 COSMIC
COSN31601666 752 COSMIC
COSN31595743 778 COSMIC
COSN31814683 811 COSMIC
COSN31610423 832 COSMIC
COSN31538351 868 COSMIC
COSN26642909 871 COSMIC
COSN30059319 940 COSMIC
COSN23506682 1103 COSMIC
COSN29771259 1202 COSMIC
COSN20074922 1259 COSMIC
COSN31550499 1306 COSMIC
COSN23998068 1336 COSMIC
COSN26584143 1346 COSMIC
COSN26647907 1346 COSMIC
COSN31579416 1389 COSMIC
COSN8489305 1407 COSMIC
COSN20043177 1421 COSMIC
COSN30144817 1466 COSMIC
COSN30690877 1486 COSMIC
COSN30695011 1582 COSMIC
COSN1277842 1699 COSMIC
COSN6769293 2114 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1305961152 4 dbSNP
rs1357241826 5 dbSNP
rs368376553 6 dbSNP
rs199610129 7 dbSNP
rs1051798188 13 dbSNP
rs376676891 15 dbSNP
rs779864197 16 dbSNP
rs751427868 17 dbSNP
rs1343152981 21 dbSNP
rs754922110 25 dbSNP
rs1272966521 30 dbSNP
rs890759313 31 dbSNP
rs781295151 35 dbSNP
rs369664495 36 dbSNP
rs1036695375 37 dbSNP
rs1278086930 40 dbSNP
rs777207693 48 dbSNP
rs748948923 52 dbSNP
rs769042854 56 dbSNP
rs1297697131 60 dbSNP
rs779346302 64 dbSNP
rs574541143 66 dbSNP
rs1311602663 69 dbSNP
rs1238176370 73 dbSNP
rs1335371524 75 dbSNP
rs541958088 76 dbSNP
rs761755408 76 dbSNP
rs1398149916 78 dbSNP
rs929295169 79 dbSNP
rs1312742964 80 dbSNP
rs1420842607 89 dbSNP
rs1046488967 90 dbSNP
rs898237511 99 dbSNP
rs1451047176 102 dbSNP
rs1362858624 104 dbSNP
rs563246406 106 dbSNP
rs1425278055 110 dbSNP
rs995687734 110 dbSNP
rs1255144836 111 dbSNP
rs1187092146 112 dbSNP
rs1033493844 116 dbSNP
rs750380839 118 dbSNP
rs906613801 119 dbSNP
rs1350128400 127 dbSNP
rs758036542 132 dbSNP
rs1247275049 138 dbSNP
rs1339004892 145 dbSNP
rs1054972676 147 dbSNP
rs893588757 153 dbSNP
rs1401091443 154 dbSNP
rs575262905 155 dbSNP
rs1020872635 157 dbSNP
rs1296960637 161 dbSNP
rs1325405687 163 dbSNP
rs375973003 167 dbSNP
rs1260333756 168 dbSNP
rs764996479 174 dbSNP
rs1163414645 179 dbSNP
rs1029860198 184 dbSNP
rs1484964319 189 dbSNP
rs1206999410 192 dbSNP
rs1163910844 193 dbSNP
rs1262465076 195 dbSNP
rs545502198 196 dbSNP
rs953829758 201 dbSNP
rs985575792 210 dbSNP
rs1431975393 222 dbSNP
rs1480964867 223 dbSNP
rs1176760312 244 dbSNP
rs1211820157 246 dbSNP
rs563715813 257 dbSNP
rs1017788950 258 dbSNP
rs1451127627 266 dbSNP
rs1290121500 269 dbSNP
rs373217134 270 dbSNP
rs1404322454 273 dbSNP
rs1024898712 274 dbSNP
rs528793117 276 dbSNP
rs1301214531 278 dbSNP
rs546880270 285 dbSNP
rs1223879114 286 dbSNP
rs1305969319 287 dbSNP
rs1425526518 298 dbSNP
rs977409539 298 dbSNP
rs924637325 299 dbSNP
rs919491023 301 dbSNP
rs189294004 304 dbSNP
rs140207935 306 dbSNP
rs1358799071 307 dbSNP
rs143613520 310 dbSNP
rs1252596107 314 dbSNP
rs1271641147 316 dbSNP
rs1490629581 317 dbSNP
rs1459317739 318 dbSNP
rs779720856 322 dbSNP
rs1248779450 323 dbSNP
rs569269392 324 dbSNP
rs539895952 325 dbSNP
rs921415372 326 dbSNP
rs1423425740 341 dbSNP
rs746448568 342 dbSNP
rs932821494 343 dbSNP
rs866612061 349 dbSNP
rs1161650173 354 dbSNP
rs987032802 361 dbSNP
rs1367401376 362 dbSNP
rs1405444425 367 dbSNP
rs1297395092 370 dbSNP
rs1370829968 371 dbSNP
rs915109735 375 dbSNP
rs1174304544 382 dbSNP
rs1452594026 389 dbSNP
rs1394560451 390 dbSNP
rs1393414554 391 dbSNP
rs762555062 401 dbSNP
rs1441798454 405 dbSNP
rs1231439500 406 dbSNP
rs978904720 407 dbSNP
rs1307970140 413 dbSNP
rs148051031 414 dbSNP
rs368584735 415 dbSNP
rs559778402 418 dbSNP
rs566858926 426 dbSNP
rs902424182 429 dbSNP
rs1420335263 434 dbSNP
rs1345036258 435 dbSNP
rs998068216 437 dbSNP
rs1050787353 438 dbSNP
rs1250039056 439 dbSNP
rs1375041313 445 dbSNP
rs750979397 449 dbSNP
rs1441190457 464 dbSNP
rs898185214 466 dbSNP
rs1006654009 474 dbSNP
rs1432816192 476 dbSNP
rs754525171 480 dbSNP
rs1159302267 489 dbSNP
rs1421635962 493 dbSNP
rs141778974 496 dbSNP
rs534960633 497 dbSNP
rs553304209 509 dbSNP
rs1239587590 510 dbSNP
rs1186378540 519 dbSNP
rs1055290495 521 dbSNP
rs963536955 525 dbSNP
rs568301158 530 dbSNP
rs773762503 530 dbSNP
rs1026555852 532 dbSNP
rs554982665 537 dbSNP
rs1013833692 542 dbSNP
rs116229073 543 dbSNP
rs982288475 545 dbSNP
rs928003508 546 dbSNP
rs1181253690 550 dbSNP
rs748655130 551 dbSNP
rs1386484944 557 dbSNP
rs1405892057 558 dbSNP
rs1412752951 561 dbSNP
rs1169636477 569 dbSNP
rs1352611217 571 dbSNP
rs1354702377 571 dbSNP
rs1298801412 574 dbSNP
rs1463302341 577 dbSNP
rs1343526819 586 dbSNP
rs1158574938 590 dbSNP
rs959624999 593 dbSNP
rs1382338112 594 dbSNP
rs140779902 607 dbSNP
rs902416079 609 dbSNP
rs753221711 614 dbSNP
rs999468923 616 dbSNP
rs1214571000 617 dbSNP
rs180824624 622 dbSNP
rs1309686196 623 dbSNP
rs756724431 628 dbSNP
rs150147797 629 dbSNP
rs1451796232 638 dbSNP
rs1274702665 639 dbSNP
rs1231219759 640 dbSNP
rs1333962567 652 dbSNP
rs550561069 653 dbSNP
rs923731509 655 dbSNP
rs1359911309 658 dbSNP
rs138826471 665 dbSNP
rs990216993 671 dbSNP
rs1437344610 674 dbSNP
rs562498914 677 dbSNP
rs1051423940 678 dbSNP
rs1442638450 680 dbSNP
rs1244503529 684 dbSNP
rs1472836934 686 dbSNP
rs557371241 689 dbSNP
rs780663814 690 dbSNP
rs1417267973 693 dbSNP
rs954194230 694 dbSNP
rs1424791761 697 dbSNP
rs572502684 697 dbSNP
rs760855306 697 dbSNP
rs1430185309 698 dbSNP
rs1171162143 703 dbSNP
rs539797256 705 dbSNP
rs761570977 706 dbSNP
rs1338942012 707 dbSNP
rs1038161268 710 dbSNP
rs1185397267 718 dbSNP
rs898240854 723 dbSNP
rs1468583149 740 dbSNP
rs7643198 742 dbSNP
rs940252914 743 dbSNP
rs746141877 749 dbSNP
rs972971043 752 dbSNP
rs919559133 761 dbSNP
rs930974641 762 dbSNP
rs1294821860 767 dbSNP
rs1219883097 769 dbSNP
rs1373363240 773 dbSNP
rs116781477 775 dbSNP
rs894877910 777 dbSNP
rs949191124 783 dbSNP
rs1283053265 787 dbSNP
rs1321832212 794 dbSNP
rs950860163 795 dbSNP
rs772177944 804 dbSNP
rs1003828985 805 dbSNP
rs1035664871 806 dbSNP
rs1396372337 810 dbSNP
rs368247033 810 dbSNP
rs544502724 810 dbSNP
rs556066092 810 dbSNP
rs7620492 811 dbSNP
rs533302003 815 dbSNP
rs1479574480 832 dbSNP
rs1250679230 833 dbSNP
rs902367085 836 dbSNP
rs1278309996 839 dbSNP
rs1233723764 856 dbSNP
rs1173403834 858 dbSNP
rs551898836 859 dbSNP
rs566921689 860 dbSNP
rs991222235 865 dbSNP
rs1022271564 866 dbSNP
rs1239821891 869 dbSNP
rs1309505585 872 dbSNP
rs1390013939 875 dbSNP
rs1373068045 876 dbSNP
rs1303872826 878 dbSNP
rs968128631 879 dbSNP
rs77657911 884 dbSNP
rs1376694183 887 dbSNP
rs549360854 890 dbSNP
rs762784772 891 dbSNP
rs763992604 894 dbSNP
rs1364017035 895 dbSNP
rs187661549 899 dbSNP
rs1032271355 907 dbSNP
rs1188508291 942 dbSNP
rs1469300652 957 dbSNP
rs73072384 958 dbSNP
rs1255367809 959 dbSNP
rs1210244359 962 dbSNP
rs143935093 966 dbSNP
rs556910634 967 dbSNP
rs1237155029 968 dbSNP
rs1400303444 976 dbSNP
rs12638476 978 dbSNP
rs954258659 985 dbSNP
rs868093407 990 dbSNP
rs751477058 994 dbSNP
rs34679552 997 dbSNP
rs1312876866 1003 dbSNP
rs911126580 1009 dbSNP
rs942414957 1013 dbSNP
rs1413615510 1018 dbSNP
rs1346984403 1019 dbSNP
rs1038450439 1020 dbSNP
rs1008283794 1041 dbSNP
rs1362909314 1057 dbSNP
rs1303069702 1059 dbSNP
rs1019711044 1067 dbSNP
rs898124878 1068 dbSNP
rs1344065020 1071 dbSNP
rs1407122100 1074 dbSNP
rs1263987127 1076 dbSNP
rs961531845 1077 dbSNP
rs929743522 1079 dbSNP
rs769754822 1083 dbSNP
rs1345316393 1084 dbSNP
rs1274088036 1085 dbSNP
rs147261578 1089 dbSNP
rs1293153415 1090 dbSNP
rs1333225751 1090 dbSNP
rs972920083 1101 dbSNP
rs886633574 1104 dbSNP
rs1319691912 1105 dbSNP
rs1380065286 1127 dbSNP
rs1004119120 1134 dbSNP
rs9824599 1135 dbSNP
rs1217299799 1144 dbSNP
rs1462764496 1145 dbSNP
rs1415394928 1148 dbSNP
rs528962417 1151 dbSNP
rs1164076184 1163 dbSNP
rs1475715079 1165 dbSNP
rs557434955 1175 dbSNP
rs190295412 1179 dbSNP
rs539858328 1192 dbSNP
rs1390334494 1194 dbSNP
rs1156518289 1195 dbSNP
rs1253853941 1197 dbSNP
rs1428742009 1198 dbSNP
rs1215806065 1199 dbSNP
rs546058764 1204 dbSNP
rs1467369250 1207 dbSNP
rs1272969140 1208 dbSNP
rs949094016 1209 dbSNP
rs767548701 1210 dbSNP
rs1269000733 1213 dbSNP
rs555316005 1213 dbSNP
rs574281303 1214 dbSNP
rs1414939085 1218 dbSNP
rs1333503897 1220 dbSNP
rs544876525 1225 dbSNP
rs1445836014 1234 dbSNP
rs1299922779 1235 dbSNP
rs1366144910 1242 dbSNP
rs1442685688 1244 dbSNP
rs775792533 1246 dbSNP
rs1272894398 1247 dbSNP
rs112154435 1248 dbSNP
rs1324950359 1248 dbSNP
rs1410367367 1251 dbSNP
rs562983098 1257 dbSNP
rs140717408 1258 dbSNP
rs761040240 1261 dbSNP
rs1441201330 1262 dbSNP
rs769083720 1271 dbSNP
rs1291040173 1272 dbSNP
rs978200254 1274 dbSNP
rs202108086 1278 dbSNP
rs1396018378 1282 dbSNP
rs893707976 1283 dbSNP
rs1271426294 1292 dbSNP
rs765883788 1292 dbSNP
rs762281976 1296 dbSNP
rs765335079 1301 dbSNP
rs1408013255 1303 dbSNP
rs1280443256 1306 dbSNP
rs560582176 1308 dbSNP
rs1235924011 1310 dbSNP
rs1171795522 1317 dbSNP
rs1399893194 1318 dbSNP
rs1402405253 1321 dbSNP
rs1273953963 1323 dbSNP
rs1442650650 1325 dbSNP
rs1337326501 1326 dbSNP
rs1322617263 1328 dbSNP
rs1389523716 1332 dbSNP
rs1326696857 1333 dbSNP
rs1434642764 1335 dbSNP
rs1409169888 1336 dbSNP
rs1295751585 1337 dbSNP
rs750506200 1338 dbSNP
rs1175563064 1339 dbSNP
rs1234343292 1340 dbSNP
rs772046590 1346 dbSNP
rs1343433981 1347 dbSNP
rs200557110 1353 dbSNP
rs766727215 1355 dbSNP
rs549135072 1357 dbSNP
rs1342599249 1358 dbSNP
rs942612980 1360 dbSNP
rs1206419191 1362 dbSNP
rs973935520 1363 dbSNP
rs1231557018 1364 dbSNP
rs1451825386 1365 dbSNP
rs994286270 1366 dbSNP
rs1486273931 1367 dbSNP
rs1375771592 1376 dbSNP
rs1473514994 1378 dbSNP
rs751346308 1385 dbSNP
rs754829195 1387 dbSNP
rs1456723901 1391 dbSNP
rs781203498 1392 dbSNP
rs1393099754 1393 dbSNP
rs953056664 1394 dbSNP
rs752669689 1408 dbSNP
rs866180363 1411 dbSNP
rs1352528238 1412 dbSNP
rs929627250 1415 dbSNP
rs1046838022 1417 dbSNP
rs916205772 1420 dbSNP
rs1314727916 1421 dbSNP
rs567476696 1428 dbSNP
rs1412213428 1433 dbSNP
rs970392546 1433 dbSNP
rs981821140 1436 dbSNP
rs1289586922 1437 dbSNP
rs1329091576 1440 dbSNP
rs923683904 1441 dbSNP
rs906955994 1444 dbSNP
rs1158325723 1448 dbSNP
rs1356547818 1456 dbSNP
rs1475778761 1458 dbSNP
rs1208913974 1461 dbSNP
rs1420642023 1462 dbSNP
rs1264996909 1464 dbSNP
rs1186443904 1465 dbSNP
rs1483947441 1467 dbSNP
rs1182649522 1470 dbSNP
rs1250905135 1471 dbSNP
rs1471589230 1473 dbSNP
rs756056910 1482 dbSNP
rs777308519 1485 dbSNP
rs1484366625 1488 dbSNP
rs938412898 1490 dbSNP
rs1236419195 1496 dbSNP
rs372877161 1496 dbSNP
rs1057036951 1498 dbSNP
rs1162954603 1503 dbSNP
rs1448338706 1505 dbSNP
rs915103333 1515 dbSNP
rs1227539961 1522 dbSNP
rs1357202482 1524 dbSNP
rs931862199 1525 dbSNP
rs1294976697 1534 dbSNP
rs1050371762 1537 dbSNP
rs889744880 1539 dbSNP
rs534497725 1540 dbSNP
rs1338116944 1541 dbSNP
rs1179972453 1542 dbSNP
rs1012927654 1543 dbSNP
rs181701722 1556 dbSNP
rs112290520 1557 dbSNP
rs1320213970 1561 dbSNP
rs1462244558 1565 dbSNP
rs1041057413 1568 dbSNP
rs759172949 1574 dbSNP
rs903878107 1590 dbSNP
rs897231006 1593 dbSNP
rs999522903 1595 dbSNP
rs767018983 1599 dbSNP
rs1476140686 1606 dbSNP
rs546912230 1609 dbSNP
rs9842769 1613 dbSNP
rs1468716993 1618 dbSNP
rs1274833029 1627 dbSNP
rs1211637132 1628 dbSNP
rs1012880890 1642 dbSNP
rs1296296851 1644 dbSNP
rs1427125978 1661 dbSNP
rs1216393385 1665 dbSNP
rs1359976651 1668 dbSNP
rs569009812 1673 dbSNP
rs879498879 1674 dbSNP
rs1441957728 1679 dbSNP
rs541429918 1681 dbSNP
rs1324279552 1684 dbSNP
rs1018540257 1688 dbSNP
rs963881444 1694 dbSNP
rs973987837 1695 dbSNP
rs1411090031 1696 dbSNP
rs539537056 1704 dbSNP
rs951087336 1713 dbSNP
rs1454428279 1718 dbSNP
rs1254535785 1725 dbSNP
rs956426114 1726 dbSNP
rs551494044 1728 dbSNP
rs989256724 1729 dbSNP
rs1446983074 1743 dbSNP
rs764709773 1747 dbSNP
rs1305798296 1759 dbSNP
rs754187470 1760 dbSNP
rs1274042293 1771 dbSNP
rs1313757403 1772 dbSNP
rs982423666 1773 dbSNP
rs928282656 1774 dbSNP
rs757690953 1781 dbSNP
rs1301594894 1784 dbSNP
rs6442111 1785 dbSNP
rs911800746 1790 dbSNP
rs1300374595 1791 dbSNP
rs944652534 1793 dbSNP
rs1370531228 1795 dbSNP
rs1167378323 1797 dbSNP
rs1434868671 1806 dbSNP
rs760359643 1806 dbSNP
rs1041004311 1807 dbSNP
rs534143389 1808 dbSNP
rs897178756 1810 dbSNP
rs1251017484 1818 dbSNP
rs1178830080 1820 dbSNP
rs555747778 1828 dbSNP
rs1482020311 1835 dbSNP
rs916764229 1844 dbSNP
rs948226216 1846 dbSNP
rs1350160322 1852 dbSNP
rs1278380358 1859 dbSNP
rs1317843142 1861 dbSNP
rs779645079 1861 dbSNP
rs1222461571 1869 dbSNP
rs1309571434 1869 dbSNP
rs1048482868 1870 dbSNP
rs1458386781 1871 dbSNP
rs1314087574 1874 dbSNP
rs1414807433 1875 dbSNP
rs1044040436 1876 dbSNP
rs888576202 1877 dbSNP
rs1465254660 1878 dbSNP
rs1364066187 1880 dbSNP
rs1160980821 1884 dbSNP
rs904096884 1886 dbSNP
rs1411063577 1889 dbSNP
rs1446488291 1896 dbSNP
rs1024257610 1897 dbSNP
rs999745165 1904 dbSNP
rs1003823266 1924 dbSNP
rs1030650044 1927 dbSNP
rs1052435917 1935 dbSNP
rs1199988506 1939 dbSNP
rs891102369 1942 dbSNP
rs956367150 1943 dbSNP
rs1465873141 1946 dbSNP
rs1262782034 1950 dbSNP
rs1207199874 1951 dbSNP
rs1045482 1954 dbSNP
rs1294375886 1955 dbSNP
rs190320310 1960 dbSNP
rs1309930525 1963 dbSNP
rs964261383 1963 dbSNP
rs1397242838 1964 dbSNP
rs1334188318 1966 dbSNP
rs1325813619 1969 dbSNP
rs1394987891 1973 dbSNP
rs1225061624 1983 dbSNP
rs1279871689 1985 dbSNP
rs995294451 1986 dbSNP
rs1026743692 1989 dbSNP
rs1290328081 1997 dbSNP
rs951305406 2001 dbSNP
rs1387672339 2010 dbSNP
rs982639824 2012 dbSNP
rs557005549 2020 dbSNP
rs1366684356 2022 dbSNP
rs577749566 2029 dbSNP
rs545105942 2031 dbSNP
rs953283728 2040 dbSNP
rs112248617 2047 dbSNP
rs985967236 2051 dbSNP
rs991671772 2062 dbSNP
rs1274227247 2068 dbSNP
rs911747088 2069 dbSNP
rs111775307 2074 dbSNP
rs948235196 2077 dbSNP
rs1243419170 2079 dbSNP
rs1043925437 2081 dbSNP
rs376557744 2088 dbSNP
rs918554873 2088 dbSNP
rs1432476787 2091 dbSNP
rs1445790335 2097 dbSNP
rs1326298449 2106 dbSNP
rs925402575 2111 dbSNP
rs1424876702 2114 dbSNP
rs929997691 2115 dbSNP
rs935584878 2117 dbSNP
rs3937 2127 dbSNP
rs891147028 2134 dbSNP
rs1186857417 2136 dbSNP
rs1426794981 2144 dbSNP
rs1467223618 2152 dbSNP
rs779241821 2156 dbSNP
rs56763535 2159 dbSNP
rs1450306061 2166 dbSNP
rs1267208091 2170 dbSNP
rs1040228953 2171 dbSNP
rs899924295 2172 dbSNP
rs1259269379 2176 dbSNP
rs182496436 2176 dbSNP
rs1276123581 2178 dbSNP
rs1299956685 2179 dbSNP
rs1045240423 2181 dbSNP
rs531630794 2183 dbSNP
rs549848105 2184 dbSNP
rs1329142357 2188 dbSNP
rs1052689131 2191 dbSNP
rs1391918792 2193 dbSNP
rs562527970 2197 dbSNP
rs1026796579 2201 dbSNP
rs886913466 2203 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguAGAAG--GAAGUCGGAg 5'
             |||||  | ||||||| 
Target 5' aauUCUUCUGCCUCAGCCUc 3'
2 - 21
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_016089 | 3UTR | AGCCACGCCACCUUGGCCUUCAAUGACAGGGAUCUAGCAAUGCUGCAUCAUCAGCCUUCCAAUACCAGGUUUAAGGGUAUUUUAAACACAGCUCCUCUUAAAUCCUCCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000427617.2 | 3UTR | CAAUUCUUCUGCCUCAGCCUCCCGAGUAGCUGGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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