pre-miRNA Information
pre-miRNA hsa-mir-3192   
Genomic Coordinates chr20: 18470615 - 18470691
Description Homo sapiens miR-3192 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3192-5p
Sequence 10| UCUGGGAGGUUGUAGCAGUGGAA |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906254403 3 dbSNP
rs554130490 4 dbSNP
rs773140898 6 dbSNP
rs376614009 11 dbSNP
rs899297329 12 dbSNP
rs1330418015 18 dbSNP
rs1402597660 21 dbSNP
rs995052311 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF681   
Synonyms -
Description zinc finger protein 681
Transcript NM_138286   
Expression
Putative miRNA Targets on ZNF681
3'UTR of ZNF681
(miRNA target sites are highlighted)
>ZNF681|NM_138286|3'UTR
   1 AAATGTGAAGAATGTAACAAAACCTTTAAAAGTTGTCACACTTGATTGTGCATAAGATAATTCATACTAAAAAAAAACCT
  81 ACAAGTGTGAAGAATGTGGCAAAACTTTTAACCAATGCTCACACCTTATTGCACAGGAAAGCATTTGTACTAGAAAAAAA
 161 TTTCAAATATACAGAATGTGAAAAAGCCATTAATATCTGTTCACATCTTACTCAACATCAGAGATTTCATACTTAATAAA
 241 AGCATTATACATGCAATTACTGTCAAAAATCTTTCAGAAAATATAAGCCTCTAAAGTGAAGAGTATTCATTTTGAAGACA
 321 CACATTATGAACATAAGGAGGGTTGTGGTACCTTTACTTGTATCACAGATCTCATTGTACACATTTTGTGCTAGAGGAAA
 401 ACCATGGAGCAGTTGCTTAAACTTTGTGCAACATAAGGAAATTTATATTGGAGAAAAACCCTGCAAATGTAATAAATTTG
 481 GGAAAACATTTTTTCAAAAACGACAGCTTAGAAAACACTAGAGGGTTCATACTAAAATCTATTTTTGCAGATGCAGTAAA
 561 TATGAAAAAATATTTAATCCAAAATTCTATGTAAATATCAGATAATTCACAGTAGAAATAGTTAAGGCACTGACACTTCA
 641 GGCATTACACTAAATCAGATTGCTGAGTATAGAAAAGAATCTAAAACTAAAGTTGGTAAATGAATTATTTGTATATAACA
 721 TTATAAGAAGTAGAAAATTTTTGCAGAGTTGTAACTACATTCAAACTATCCTTTGAAAAAAATTAGGTTTTATGAAAAGT
 801 GAATAATGTCATTTAACTCAAGTTATGCTCTTCATTCCTATTGTATTCACATGTGAAAGCATGTGACTTAATTGTTGCTG
 881 CATCAAAGATGAGAGATTCTTTGTTATTAGGTGTGCATTATTTACGACCTTTTTTAGTGAAAGAGTTAAGGACATTAAAA
 961 TGTAAGATGCAAGATGAAAATGTAAGTGGAGAGGCTCTTTCTGGTTAATTTATAATATTGACTGATGCATGAGGTAGGAG
1041 TTCAGATAAATATCCTGTGTTATATTGAGAAAAAAAATTTTCTGGTATATCATTTTACTAATTGTACTTTTTTTTTTTTT
1121 GAGACAGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGTGATCTTGGCTCACCAAAACCTCCACCTCCCAGGT
1201 TCAAGGGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCATGCCCGGCTAATTTTGTATTT
1281 TTAATAGAGATGGGGTTTCTCTATGTTGGTCAGGCTGGTCTCAAACTCCCGACCTCGGGTGATCCACCCACCTCGGCCTC
1361 CCAAAGTGCTGGGATTACAGGCGCGAGTCACCATGCCTGGCCAATTGTACTTTTATGTAATAAAATGTAGTACATTTTAA
1441 AATTTTTAGATAATGTGTGAACTTATTAATCAGGCTTTTTAAAAAACATGTTAAGACCATCGTGCATTCAATGAAGCATT
1521 ATTATGCCATTAAATTTAACTTATCCCATCTTACTCAAGGGTATAGGTAAATGATGGTAACTATACACTATTTAATAAGA
1601 TAATGGACTAACATTTCTAGTAATCTGTTTTGCCAGTGGCTTTAAATTGCAAATAAGTCAGAGAATATTATTCCTGTAGG
1681 TTGAATTATTACTCATTTTTTCTTATTTAAACTTATTTTTCTTAATTTTTGTGGGTACATAGTATGTGTAAATATGGCAT
1761 ATATGGCATATTTTGATACAGGTATATAATATGTAATAATTACATATGGGTAAATGAAATATTCATTACCTGCAGCATTT
1841 ATTGTTTGTATTTGTTTGTATTATAAACTAATTCTGCACTTTTCGGTTTTTTTTTGAGACGAGTCTCACTATGTCACCCA
1921 GGCTGTGCACGCCTGGGTGCATTGGCGTGGTCTCAGCTCACTGCAACCTCCGCCTACTGGGTTCAAGTGATTCTTCCGCC
2001 TCAGCCTCCTGAGTAGTTGGGACTACAGGCGCATGCCACCACACTCAGCTAATTTTTGTATTTTTAGTAGAAACAGTTTC
2081 ACTACGTTGGCCAGGTTTGTCTTGAACTCCTGACCCCATGATTAGCCCCCTCGGCCTCCCAAAGTGCTGGGATTACAGGT
2161 GGGAGCCACCACACCCAGCCACTTTTAGTTGTTTTCAAATGTACATTAAATTGTTGTTGGCTACAGGGTCTCTTTTATGG
2241 TCATAAGAAAACAATATAAACAAAATGCATACATTTCTGAGACCTGAATTAACATTAAAAAATTGTTATATATTTTTCTT
2321 CAAACATGTTGCCTCTCTGCCTGCAAGCACATACAGACTATTAGTTTTGATTTACACAGAGTTAAATATATACATATATT
2401 ACTTTAAAGATAAAGCTTGGGTTTAAAAAAATTATGGAGTAAATAAATGCCTTCTTTGCGAGTATGAGTTTCTACCTAGT
2481 TTCAGAAGAGCAATATTGAAACAAATCAAATTATTTTAATTAGATGATGACTGCAAAACTAAAAAAACTTAAAAATGCTG
2561 AAAACAAATCCATACTCTCTGCTTTGTATTGAATTGATTACTGTAAAATTGTATGGCTTATAATTCAGAATCTCCCTATG
2641 CAAATTTTTGTTTTTACTTGCCTGATTCTTAGGCTAGACCCATAATTTTCTTGTGTCTTACATTTTTTTCTCTTATTTTA
2721 TATAAGATGCTATGTGAGCTGGTCAGAGATTATAAAAATAATTTTTATAAAATTAGTGCAAAAAATTTAGATTTAATTTC
2801 AAAATTAGTGTATTGTTATATTTTATGTTGTTAGAATATTTTATTTTGTTCTTTTAATTGGAGAACGCTGTATAAGCCTA
2881 CTTTTTTTAGTTTTTGTTCCTTTCAGTTTTTATAATGAAAATAAGTAAATATTGATTGAGCCCATTTATTTAGGTGAGTA
2961 CTAGGGGGGCTTCCTAAATCATGAGGATGTTTTTATATATAAATATAGCAAACAAACATGACAGTGCTTTCTGTGTCACA
3041 GATGCTTTATAATAAGCCATAAATATTCCTGTTGGAGTTAGTTTGTAACTTCAAGACAGAGATGGAACATATCAATTGTG
3121 AGAAATAACATTGATTTTTTATGTGGAGAGGACATTTATTTTCAGGCTGCAAAGCTCAGTTTTGCTGAATTAAAAAATTG
3201 TGCTTCTTTTATTTCCTAATTGTCTTAGTTTTGTTTGTCTTATTATGTGTATTTCAGCTGTGTATGCATCACAGCCCTCC
3281 TTTTTGCTGTGCTGTGGCTACAGTTTTCTCACTGTTCTCTTCACACCATGTCATTTCACATGGTATATTGTAGGTTTTGA
3361 TGAGAAATCGGTATTTTTAATGCACTGCAAGATTGGTTTTAACTGGAGATTTTGCATATCAATATAATTTTCTGATCAGT
3441 TAAATTAAAACAAAAAGCATACAGTGTCCACAGATGAAAGGATTAAATCATTTAGCGTTGTTTTTCTCTGTTTGTTAAAG
3521 AATAATCTTATTAAATTCTTACACAAAGTGTGGCAAATATAAAATTTGCTTGAAAATATATCTTAGAAATTAAACTTTTA
3601 ATTTAATTTTCTACAGTATACTTATGCCACAATGTACGTTTCCATGCAAAATCTTCTATTTGTAAGTGTGAACATTAAAC
3681 ATTGCAAAATAGTAAAATGACCTCTGTGATTTTGAAACCTGGAGTAATATTTCTTTTCCATATTCATATTACAATTTGAA
3761 GAAATTTTCTCAGTTTTATATGTTTTTTTAGTGGGTGAAGTTCAGTCTACAGTTTTTACATTTAGTCACCTAACTCTAGC
3841 CAACTTCTTGGTCATATTCTCTGGAAAACATTCGAAGATCATGGCAGCTTTTAGATAAAAACATTTTCTATTATTTTGCG
3921 TGCAAACTTGTTTACTGTGTTCACAGAGTGGCCAGTCATGAGACCATAAGAAACAGCTGCCCTTTTAGTGTCTTTCATAC
4001 CGTCTGTAATATATAAATTGTGCATTTATTCTGTGAAGCATGACATTTTGAAGTATATACACATTGTCAAATGCTTCATT
4081 CTAGGTAATTAATGCTTTACCTAACATAGTTAACATTTTTGTGGTAAGAGCACATGACAATGTTTTAGCATTTTTCAGAA
4161 ATACAAATACATTGTTATGAACTATAGGCACCATGCAGTACAAAAGCTTTTTTGAACTTATTTCTCCTATTCAACTGTAA
4241 TTATGTATTTGACTGACATCTTTCTAAACCCCTCTTTTTTCCAAATATGTTGGCATCTGGTGGTCACCATTTTATTCTCC
4321 ACTTCAGTTAGATTAATTTTTCTAGAATCATGTAAGTGAAATAATTTGGTTAATCTATGTAATTGAAAATAATAAATTTT
4401 TTTATTTTAAAGATGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaGGUGACGAUGUUGGAGGGUCu 5'
            |||   |  | ||||||||| 
Target 5' caCCAAAACCTCCACCTCCCAGg 3'
1177 - 1199 157.00 -22.40
2
miRNA  3' aaGGUGACGAUGUUGGAGGGUcu 5'
            ||||  || |::|||||||  
Target 5' acCCAC--CT-CGGCCTCCCAaa 3'
1346 - 1365 144.00 -21.10
3
miRNA  3' aaGGUGACGAUGUUGGAGGG-UCu 5'
            |: ||||  ||:|||||| || 
Target 5' ttCTCCTGCCTCAGCCTCCCGAGt 3'
1209 - 1232 141.00 -25.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30528034 47 COSMIC
COSN22776138 68 COSMIC
COSN28844040 69 COSMIC
COSN28218215 120 COSMIC
COSN31514611 171 COSMIC
COSN30160258 180 COSMIC
COSN1764073 194 COSMIC
COSN1213434 266 COSMIC
COSN1764072 289 COSMIC
COSN21764850 541 COSMIC
COSN22892864 564 COSMIC
COSN20115672 868 COSMIC
COSN23269294 893 COSMIC
COSN29450460 1383 COSMIC
COSN1213433 1702 COSMIC
COSN30437043 1797 COSMIC
COSN9847734 1805 COSMIC
COSN26870861 1816 COSMIC
COSN394575 2086 COSMIC
COSN28201733 2202 COSMIC
COSN16860117 2248 COSMIC
COSN24266692 2279 COSMIC
COSN29378032 2298 COSMIC
COSN9351837 2337 COSMIC
COSN17372155 2352 COSMIC
COSN15796280 2514 COSMIC
COSN16950838 2731 COSMIC
COSN7052312 2881 COSMIC
COSN20115671 2963 COSMIC
COSN7119766 2999 COSMIC
COSN1764071 3167 COSMIC
COSN29376262 3479 COSMIC
COSN22847804 3505 COSMIC
COSN25443294 4187 COSMIC
COSN17844585 4208 COSMIC
COSN24749768 4220 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1406031721 1 dbSNP
rs760910414 2 dbSNP
rs932268449 13 dbSNP
rs200005657 14 dbSNP
rs1321595450 16 dbSNP
rs1335510530 23 dbSNP
rs772333406 33 dbSNP
rs199778359 35 dbSNP
rs1157170663 48 dbSNP
rs745550172 52 dbSNP
rs532475751 61 dbSNP
rs1228386220 63 dbSNP
rs1378767098 63 dbSNP
rs1314728376 70 dbSNP
rs1207744461 72 dbSNP
rs1041169831 76 dbSNP
rs1236826533 78 dbSNP
rs368732075 78 dbSNP
rs370414878 78 dbSNP
rs540409062 78 dbSNP
rs544617326 78 dbSNP
rs1473174622 79 dbSNP
rs550418355 81 dbSNP
rs10405811 82 dbSNP
rs1160201320 83 dbSNP
rs1484679912 83 dbSNP
rs1265046303 86 dbSNP
rs1468564713 91 dbSNP
rs1217154060 92 dbSNP
rs371843005 94 dbSNP
rs982945809 98 dbSNP
rs1283461089 99 dbSNP
rs951205359 100 dbSNP
rs1370563345 110 dbSNP
rs1227332151 120 dbSNP
rs1288589318 135 dbSNP
rs931328424 137 dbSNP
rs920543551 141 dbSNP
rs1442893519 147 dbSNP
rs1037563142 149 dbSNP
rs564982448 161 dbSNP
rs940545968 167 dbSNP
rs907683792 178 dbSNP
rs1183076229 181 dbSNP
rs1299180723 181 dbSNP
rs540414389 186 dbSNP
rs572838742 187 dbSNP
rs1172330760 189 dbSNP
rs1426347186 193 dbSNP
rs756808339 196 dbSNP
rs992542541 196 dbSNP
rs1358794471 210 dbSNP
rs1325798413 215 dbSNP
rs1405985185 216 dbSNP
rs969323188 224 dbSNP
rs182621814 238 dbSNP
rs1023625427 250 dbSNP
rs1230657174 254 dbSNP
rs1013571793 263 dbSNP
rs1273979167 270 dbSNP
rs980208039 270 dbSNP
rs753440933 284 dbSNP
rs896503124 287 dbSNP
rs10405351 289 dbSNP
rs189692256 303 dbSNP
rs1205932864 307 dbSNP
rs1254128068 309 dbSNP
rs78494527 327 dbSNP
rs1000055536 329 dbSNP
rs1489910570 329 dbSNP
rs1247593316 333 dbSNP
rs1479210607 335 dbSNP
rs10404926 347 dbSNP
rs1431001039 355 dbSNP
rs1168635449 360 dbSNP
rs1371894188 365 dbSNP
rs1044311150 380 dbSNP
rs1322482123 392 dbSNP
rs1239967384 393 dbSNP
rs956207951 394 dbSNP
rs1019761203 409 dbSNP
rs756064947 411 dbSNP
rs1295196100 418 dbSNP
rs1341339328 425 dbSNP
rs1229098521 432 dbSNP
rs1223275916 435 dbSNP
rs1008319936 439 dbSNP
rs867653865 444 dbSNP
rs8102553 447 dbSNP
rs995935903 448 dbSNP
rs1247840875 454 dbSNP
rs922163823 461 dbSNP
rs1288507839 468 dbSNP
rs898472724 472 dbSNP
rs1037594042 473 dbSNP
rs1191070821 480 dbSNP
rs79218870 482 dbSNP
rs1211347330 501 dbSNP
rs1040616843 502 dbSNP
rs940577006 512 dbSNP
rs1162191442 521 dbSNP
rs943671904 524 dbSNP
rs912215278 525 dbSNP
rs1279404213 526 dbSNP
rs1318255786 535 dbSNP
rs1218350518 536 dbSNP
rs752479645 541 dbSNP
rs767220169 545 dbSNP
rs867168833 553 dbSNP
rs982550951 556 dbSNP
rs951240408 564 dbSNP
rs1437443736 571 dbSNP
rs919757188 588 dbSNP
rs1358697810 591 dbSNP
rs927062584 602 dbSNP
rs973926312 613 dbSNP
rs979860450 621 dbSNP
rs1211046172 625 dbSNP
rs375150816 632 dbSNP
rs1321598063 637 dbSNP
rs947062086 638 dbSNP
rs1407779112 639 dbSNP
rs969231506 640 dbSNP
rs544384131 642 dbSNP
rs1473549756 649 dbSNP
rs577264674 658 dbSNP
rs1465079012 659 dbSNP
rs1417103199 661 dbSNP
rs1192762326 667 dbSNP
rs558924968 669 dbSNP
rs1322361884 674 dbSNP
rs956237737 679 dbSNP
rs1313481164 683 dbSNP
rs372072344 686 dbSNP
rs1031452926 689 dbSNP
rs1226730271 692 dbSNP
rs1287959032 695 dbSNP
rs534375697 708 dbSNP
rs567198380 716 dbSNP
rs1458731156 720 dbSNP
rs1254672211 722 dbSNP
rs1483188269 723 dbSNP
rs1201557571 725 dbSNP
rs1259222435 725 dbSNP
rs1198536032 739 dbSNP
rs1256177394 744 dbSNP
rs1486367300 747 dbSNP
rs1179469617 749 dbSNP
rs9305009 755 dbSNP
rs1472740881 758 dbSNP
rs1161065638 759 dbSNP
rs1375749897 764 dbSNP
rs536909959 766 dbSNP
rs1465440210 768 dbSNP
rs1043833711 769 dbSNP
rs1220181891 770 dbSNP
rs1404352086 770 dbSNP
rs1028843375 782 dbSNP
rs1351309038 783 dbSNP
rs1367102092 783 dbSNP
rs1273324155 784 dbSNP
rs73528115 786 dbSNP
rs1311991882 787 dbSNP
rs900687114 789 dbSNP
rs186789699 792 dbSNP
rs183089550 799 dbSNP
rs1040563277 801 dbSNP
rs1340734549 806 dbSNP
rs1330826391 817 dbSNP
rs532149957 822 dbSNP
rs1250478837 827 dbSNP
rs944997925 829 dbSNP
rs912223145 833 dbSNP
rs1047198771 836 dbSNP
rs1352757324 841 dbSNP
rs929724060 843 dbSNP
rs919647017 848 dbSNP
rs763946445 850 dbSNP
rs1264931384 866 dbSNP
rs78763184 868 dbSNP
rs71165889 870 dbSNP
rs1414835394 874 dbSNP
rs1176599163 888 dbSNP
rs886389764 891 dbSNP
rs969178661 895 dbSNP
rs372256998 897 dbSNP
rs938539912 898 dbSNP
rs765489847 910 dbSNP
rs1371272848 912 dbSNP
rs748819243 913 dbSNP
rs1411842360 923 dbSNP
rs1292011001 925 dbSNP
rs916422038 926 dbSNP
rs992066826 929 dbSNP
rs571307024 936 dbSNP
rs1479908004 946 dbSNP
rs777698059 946 dbSNP
rs546508011 951 dbSNP
rs914243977 954 dbSNP
rs1239737110 956 dbSNP
rs1030981503 960 dbSNP
rs978471668 962 dbSNP
rs1260504642 963 dbSNP
rs968089137 988 dbSNP
rs1022302819 994 dbSNP
rs1278694052 1010 dbSNP
rs113912009 1011 dbSNP
rs1187871052 1020 dbSNP
rs374633562 1022 dbSNP
rs370295287 1034 dbSNP
rs1308616427 1036 dbSNP
rs912847649 1039 dbSNP
rs542524392 1044 dbSNP
rs1349491562 1053 dbSNP
rs1458638490 1059 dbSNP
rs987045991 1066 dbSNP
rs1448431138 1069 dbSNP
rs10153523 1077 dbSNP
rs1310895082 1078 dbSNP
rs1310008893 1080 dbSNP
rs1965573 1082 dbSNP
rs1221882697 1083 dbSNP
rs1397164199 1085 dbSNP
rs1463383875 1090 dbSNP
rs112362590 1099 dbSNP
rs577300713 1100 dbSNP
rs1476377353 1103 dbSNP
rs1180157768 1106 dbSNP
rs1413202814 1113 dbSNP
rs79578872 1119 dbSNP
rs79137907 1120 dbSNP
rs1167387039 1121 dbSNP
rs1386824755 1121 dbSNP
rs879813024 1121 dbSNP
rs1157470647 1135 dbSNP
rs1321702493 1137 dbSNP
rs1965574 1147 dbSNP
rs1446499821 1154 dbSNP
rs1300514779 1160 dbSNP
rs1416543136 1165 dbSNP
rs1377821583 1168 dbSNP
rs1965575 1170 dbSNP
rs1326713863 1174 dbSNP
rs960674776 1186 dbSNP
rs1035591065 1191 dbSNP
rs1002766121 1208 dbSNP
rs1207966003 1213 dbSNP
rs573488851 1215 dbSNP
rs1483623048 1216 dbSNP
rs1190236826 1219 dbSNP
rs1255837049 1221 dbSNP
rs905702354 1223 dbSNP
rs775887282 1224 dbSNP
rs1488700668 1226 dbSNP
rs1413203145 1228 dbSNP
rs1285590393 1229 dbSNP
rs898170336 1236 dbSNP
rs1414846241 1240 dbSNP
rs555158893 1244 dbSNP
rs1314231555 1245 dbSNP
rs1348209989 1248 dbSNP
rs1408877157 1249 dbSNP
rs1236907310 1255 dbSNP
rs1352591210 1261 dbSNP
rs536946545 1264 dbSNP
rs569527104 1265 dbSNP
rs916402655 1266 dbSNP
rs1249753505 1272 dbSNP
rs1354804126 1275 dbSNP
rs992014547 1283 dbSNP
rs939214893 1284 dbSNP
rs556718491 1294 dbSNP
rs1360713509 1295 dbSNP
rs923823722 1303 dbSNP
rs1477240146 1318 dbSNP
rs978042137 1322 dbSNP
rs1451232272 1328 dbSNP
rs7508574 1330 dbSNP
rs1022290013 1333 dbSNP
rs1164936954 1349 dbSNP
rs1423743100 1351 dbSNP
rs1416336651 1352 dbSNP
rs1368192202 1354 dbSNP
rs974790109 1355 dbSNP
rs964795358 1356 dbSNP
rs1337233103 1363 dbSNP
rs1434012568 1364 dbSNP
rs912201536 1367 dbSNP
rs1371589427 1375 dbSNP
rs1051790256 1382 dbSNP
rs1262691097 1383 dbSNP
rs1019053724 1384 dbSNP
rs140773122 1385 dbSNP
rs1450131664 1387 dbSNP
rs886623924 1396 dbSNP
rs1026951422 1399 dbSNP
rs974300480 1401 dbSNP
rs563822054 1408 dbSNP
rs1266093724 1415 dbSNP
rs1198564321 1417 dbSNP
rs898154911 1420 dbSNP
rs1247692639 1430 dbSNP
rs962837009 1433 dbSNP
rs1187245812 1439 dbSNP
rs1038070476 1450 dbSNP
rs982807911 1454 dbSNP
rs947765657 1455 dbSNP
rs1398158343 1466 dbSNP
rs1452626218 1469 dbSNP
rs894870902 1472 dbSNP
rs1322591329 1474 dbSNP
rs370997320 1479 dbSNP
rs1442926081 1488 dbSNP
rs181782092 1489 dbSNP
rs1294652567 1494 dbSNP
rs1364440610 1499 dbSNP
rs538660664 1500 dbSNP
rs1272043192 1501 dbSNP
rs548764974 1502 dbSNP
rs1209496789 1510 dbSNP
rs1290967712 1511 dbSNP
rs946688703 1518 dbSNP
rs1293532256 1520 dbSNP
rs191702256 1522 dbSNP
rs1450693369 1525 dbSNP
rs748819773 1533 dbSNP
rs970040390 1545 dbSNP
rs1392852309 1554 dbSNP
rs1173488811 1558 dbSNP
rs915230037 1566 dbSNP
rs1418206022 1572 dbSNP
rs1023296071 1574 dbSNP
rs1318346711 1575 dbSNP
rs1387772113 1587 dbSNP
rs1382744263 1600 dbSNP
rs777162511 1604 dbSNP
rs1466639015 1607 dbSNP
rs563581975 1610 dbSNP
rs542459910 1616 dbSNP
rs57971486 1627 dbSNP
rs1435122486 1632 dbSNP
rs1052867644 1646 dbSNP
rs964699916 1652 dbSNP
rs911949625 1653 dbSNP
rs890798311 1663 dbSNP
rs1486451258 1665 dbSNP
rs1050821357 1680 dbSNP
rs1263137145 1688 dbSNP
rs1440190395 1690 dbSNP
rs1186295634 1691 dbSNP
rs1257749386 1710 dbSNP
rs987584013 1711 dbSNP
rs950911512 1712 dbSNP
rs1156640474 1717 dbSNP
rs1410992952 1724 dbSNP
rs1268336954 1739 dbSNP
rs1160233919 1745 dbSNP
rs1400064663 1748 dbSNP
rs1026523885 1752 dbSNP
rs1313612672 1758 dbSNP
rs62118593 1759 dbSNP
rs963645531 1761 dbSNP
rs1288053812 1765 dbSNP
rs767293060 1770 dbSNP
rs754742690 1771 dbSNP
rs908688961 1772 dbSNP
rs1344981007 1779 dbSNP
rs1209484448 1780 dbSNP
rs1257636319 1781 dbSNP
rs370172759 1782 dbSNP
rs796536256 1791 dbSNP
rs1011887414 1792 dbSNP
rs1249477765 1799 dbSNP
rs1419452696 1804 dbSNP
rs894818525 1807 dbSNP
rs1318597469 1809 dbSNP
rs1465518600 1810 dbSNP
rs1056576806 1814 dbSNP
rs1250548647 1823 dbSNP
rs1377367686 1828 dbSNP
rs185693216 1830 dbSNP
rs902335517 1844 dbSNP
rs1301566827 1848 dbSNP
rs1374405156 1856 dbSNP
rs1439463623 1863 dbSNP
rs1299691002 1874 dbSNP
rs1042251610 1876 dbSNP
rs1330987575 1883 dbSNP
rs147251484 1884 dbSNP
rs561509997 1885 dbSNP
rs1038941400 1887 dbSNP
rs1022905537 1890 dbSNP
rs1250401392 1892 dbSNP
rs990044198 1894 dbSNP
rs556402755 1896 dbSNP
rs60050183 1896 dbSNP
rs957198883 1896 dbSNP
rs372648860 1897 dbSNP
rs1453663044 1898 dbSNP
rs1194192017 1900 dbSNP
rs58743241 1901 dbSNP
rs1214799360 1904 dbSNP
rs1447716784 1917 dbSNP
rs987961110 1924 dbSNP
rs1965577 1931 dbSNP
rs1463746321 1933 dbSNP
rs890912683 1936 dbSNP
rs138966861 1940 dbSNP
rs1173215672 1942 dbSNP
rs577576238 1947 dbSNP
rs751843918 1950 dbSNP
rs1363723496 1956 dbSNP
rs143174822 1960 dbSNP
rs1038631432 1961 dbSNP
rs1965578 1966 dbSNP
rs1023186075 1971 dbSNP
rs567012122 1972 dbSNP
rs939514143 1976 dbSNP
rs1214156295 1979 dbSNP
rs959024090 1980 dbSNP
rs1463518636 1990 dbSNP
rs548798543 1996 dbSNP
rs866317539 1997 dbSNP
rs1034724967 1998 dbSNP
rs1162958653 2011 dbSNP
rs367580101 2014 dbSNP
rs1003690432 2021 dbSNP
rs181411596 2026 dbSNP
rs1462285453 2028 dbSNP
rs1345367145 2029 dbSNP
rs138030670 2030 dbSNP
rs551667692 2031 dbSNP
rs1287732953 2032 dbSNP
rs990068655 2033 dbSNP
rs1335636177 2034 dbSNP
rs1215884022 2035 dbSNP
rs957312935 2042 dbSNP
rs1010666104 2048 dbSNP
rs369890742 2072 dbSNP
rs149476952 2074 dbSNP
rs66491165 2076 dbSNP
rs10645381 2077 dbSNP
rs200496597 2077 dbSNP
rs4020523 2077 dbSNP
rs1274846586 2083 dbSNP
rs1403331423 2085 dbSNP
rs533034412 2086 dbSNP
rs1312718983 2087 dbSNP
rs1038890182 2089 dbSNP
rs943331472 2098 dbSNP
rs911886062 2103 dbSNP
rs1051802816 2109 dbSNP
rs1382410654 2112 dbSNP
rs929314426 2114 dbSNP
rs1159271307 2125 dbSNP
rs1257052479 2130 dbSNP
rs1475681739 2131 dbSNP
rs919318370 2132 dbSNP
rs1469708888 2133 dbSNP
rs973902189 2140 dbSNP
rs761199709 2142 dbSNP
rs376557922 2143 dbSNP
rs1347521631 2149 dbSNP
rs1363115292 2150 dbSNP
rs1029430947 2152 dbSNP
rs567838079 2165 dbSNP
rs1415038111 2166 dbSNP
rs942134941 2170 dbSNP
rs113856461 2171 dbSNP
rs1473842789 2173 dbSNP
rs899507867 2179 dbSNP
rs1284859383 2185 dbSNP
rs1318713773 2188 dbSNP
rs1257948262 2196 dbSNP
rs188131542 2199 dbSNP
rs1005175281 2205 dbSNP
rs960305965 2216 dbSNP
rs1249971540 2220 dbSNP
rs887396635 2220 dbSNP
rs1178189230 2223 dbSNP
rs775840846 2226 dbSNP
rs1035079318 2228 dbSNP
rs1047290764 2243 dbSNP
rs528633917 2248 dbSNP
rs1349295601 2249 dbSNP
rs906671792 2258 dbSNP
rs1247613011 2268 dbSNP
rs1314329706 2271 dbSNP
rs966793020 2276 dbSNP
rs1020668894 2279 dbSNP
rs1010615126 2281 dbSNP
rs1341663138 2293 dbSNP
rs1279967607 2297 dbSNP
rs1375392424 2304 dbSNP
rs1217427751 2305 dbSNP
rs561348212 2309 dbSNP
rs7254453 2321 dbSNP
rs1213182971 2325 dbSNP
rs1272725062 2326 dbSNP
rs1437504019 2326 dbSNP
rs1205614140 2332 dbSNP
rs1234981970 2335 dbSNP
rs1007419509 2337 dbSNP
rs924544298 2338 dbSNP
rs890352991 2341 dbSNP
rs1175032452 2347 dbSNP
rs1393839309 2358 dbSNP
rs1409042611 2363 dbSNP
rs1329241259 2376 dbSNP
rs1400382731 2379 dbSNP
rs1356077608 2391 dbSNP
rs1438541649 2403 dbSNP
rs1302568789 2415 dbSNP
rs1371699225 2425 dbSNP
rs955246511 2432 dbSNP
rs1338923314 2435 dbSNP
rs922396374 2445 dbSNP
rs368942900 2449 dbSNP
rs1275470228 2460 dbSNP
rs1450229700 2462 dbSNP
rs10500221 2465 dbSNP
rs563690374 2466 dbSNP
rs964176979 2474 dbSNP
rs929287179 2475 dbSNP
rs897820589 2477 dbSNP
rs1474844053 2478 dbSNP
rs1168143220 2485 dbSNP
rs1005204647 2490 dbSNP
rs1037786463 2492 dbSNP
rs942126454 2495 dbSNP
rs545687649 2506 dbSNP
rs1395076834 2515 dbSNP
rs951033709 2516 dbSNP
rs534873820 2528 dbSNP
rs1325931894 2541 dbSNP
rs1004176276 2548 dbSNP
rs991680076 2548 dbSNP
rs140292409 2551 dbSNP
rs1274236185 2554 dbSNP
rs1337522034 2555 dbSNP
rs1207404045 2557 dbSNP
rs928874658 2564 dbSNP
rs552591434 2572 dbSNP
rs1012408436 2577 dbSNP
rs893924219 2581 dbSNP
rs1446128521 2586 dbSNP
rs1243457499 2588 dbSNP
rs1474039203 2594 dbSNP
rs1163879327 2596 dbSNP
rs1418319424 2603 dbSNP
rs113841642 2611 dbSNP
rs1462884725 2614 dbSNP
rs17713071 2616 dbSNP
rs1021080831 2619 dbSNP
rs935335947 2622 dbSNP
rs1357605092 2627 dbSNP
rs1273136660 2635 dbSNP
rs989183423 2636 dbSNP
rs879851205 2638 dbSNP
rs573429283 2639 dbSNP
rs565979447 2654 dbSNP
rs1007316397 2660 dbSNP
rs762253212 2661 dbSNP
rs922544097 2662 dbSNP
rs555065302 2664 dbSNP
rs1030207678 2666 dbSNP
rs1325531468 2674 dbSNP
rs1352084110 2682 dbSNP
rs1205162471 2689 dbSNP
rs963902014 2693 dbSNP
rs993859486 2695 dbSNP
rs1484452262 2696 dbSNP
rs909658691 2697 dbSNP
rs536713329 2699 dbSNP
rs1257866540 2703 dbSNP
rs983812366 2710 dbSNP
rs1179453925 2719 dbSNP
rs569839134 2722 dbSNP
rs551238949 2732 dbSNP
rs897816910 2740 dbSNP
rs146686240 2741 dbSNP
rs1037733897 2745 dbSNP
rs35574084 2749 dbSNP
rs1025231611 2762 dbSNP
rs1003207312 2763 dbSNP
rs777032682 2768 dbSNP
rs1377566967 2774 dbSNP
rs185319288 2779 dbSNP
rs1474840623 2786 dbSNP
rs547046814 2788 dbSNP
rs1241825205 2789 dbSNP
rs114780416 2790 dbSNP
rs893952285 2791 dbSNP
rs181832155 2801 dbSNP
rs1251876067 2806 dbSNP
rs1212338531 2808 dbSNP
rs1320688600 2813 dbSNP
rs928799701 2815 dbSNP
rs1053883804 2817 dbSNP
rs1041971055 2818 dbSNP
rs1249587713 2818 dbSNP
rs1274142498 2820 dbSNP
rs759259976 2824 dbSNP
rs1419547140 2842 dbSNP
rs1214353478 2851 dbSNP
rs532849115 2857 dbSNP
rs774207014 2864 dbSNP
rs902516736 2866 dbSNP
rs913558129 2867 dbSNP
rs1397073217 2868 dbSNP
rs1460677399 2870 dbSNP
rs1324037173 2872 dbSNP
rs552848251 2877 dbSNP
rs1052239318 2881 dbSNP
rs989132500 2882 dbSNP
rs933330369 2884 dbSNP
rs1324451612 2889 dbSNP
rs35219653 2889 dbSNP
rs1370967094 2892 dbSNP
rs1232884634 2907 dbSNP
rs1303548054 2914 dbSNP
rs1313539199 2929 dbSNP
rs957720661 2935 dbSNP
rs1170814606 2943 dbSNP
rs2049578 2948 dbSNP
rs1200368405 2957 dbSNP
rs1251038214 2962 dbSNP
rs199776626 2970 dbSNP
rs530862174 2974 dbSNP
rs1454478393 2983 dbSNP
rs1251817839 2989 dbSNP
rs1426893567 2994 dbSNP
rs1169998983 2996 dbSNP
rs1191276777 2997 dbSNP
rs909691265 3006 dbSNP
rs747742090 3008 dbSNP
rs1442316186 3012 dbSNP
rs929766184 3019 dbSNP
rs983844914 3019 dbSNP
rs1380094804 3026 dbSNP
rs1294392339 3027 dbSNP
rs1307765661 3036 dbSNP
rs1220208597 3048 dbSNP
rs1459428551 3057 dbSNP
rs954564061 3059 dbSNP
rs1333997002 3062 dbSNP
rs34694861 3070 dbSNP
rs563954768 3072 dbSNP
rs1204206539 3074 dbSNP
rs1030612997 3076 dbSNP
rs1186050467 3078 dbSNP
rs993413792 3083 dbSNP
rs962293214 3085 dbSNP
rs1281228707 3090 dbSNP
rs991056231 3092 dbSNP
rs958199375 3093 dbSNP
rs748791201 3101 dbSNP
rs1347516434 3102 dbSNP
rs1032470809 3103 dbSNP
rs1301259526 3105 dbSNP
rs1016206930 3107 dbSNP
rs1006198085 3108 dbSNP
rs1378962787 3112 dbSNP
rs1298714287 3122 dbSNP
rs894488356 3128 dbSNP
rs1287825490 3131 dbSNP
rs1055849984 3134 dbSNP
rs1362159170 3139 dbSNP
rs1441435942 3154 dbSNP
rs1352519469 3158 dbSNP
rs1354576839 3162 dbSNP
rs1335996760 3163 dbSNP
rs1434940530 3169 dbSNP
rs1003409688 3172 dbSNP
rs902636001 3178 dbSNP
rs1315095862 3182 dbSNP
rs1215107282 3196 dbSNP
rs907362527 3197 dbSNP
rs1489361102 3199 dbSNP
rs575996223 3205 dbSNP
rs1257162697 3209 dbSNP
rs946304239 3215 dbSNP
rs1171135010 3220 dbSNP
rs533714190 3223 dbSNP
rs997951391 3227 dbSNP
rs563863432 3233 dbSNP
rs1184015741 3235 dbSNP
rs1441026272 3242 dbSNP
rs900476962 3243 dbSNP
rs1157660324 3246 dbSNP
rs1040040150 3247 dbSNP
rs1421058056 3250 dbSNP
rs1177113935 3260 dbSNP
rs1374525588 3264 dbSNP
rs1415136534 3275 dbSNP
rs559595934 3277 dbSNP
rs550168607 3279 dbSNP
rs377739760 3292 dbSNP
rs1285763282 3297 dbSNP
rs541296782 3301 dbSNP
rs1223161062 3308 dbSNP
rs914805026 3312 dbSNP
rs1355943967 3327 dbSNP
rs1469107850 3328 dbSNP
rs1239575736 3333 dbSNP
rs942587749 3334 dbSNP
rs1279859472 3338 dbSNP
rs1486146803 3340 dbSNP
rs1212052185 3344 dbSNP
rs1212639917 3345 dbSNP
rs888283193 3361 dbSNP
rs530180706 3370 dbSNP
rs1278489076 3372 dbSNP
rs1382758850 3377 dbSNP
rs7249699 3378 dbSNP
rs1171243398 3379 dbSNP
rs1317564922 3384 dbSNP
rs1394059544 3387 dbSNP
rs1414703894 3387 dbSNP
rs561350288 3393 dbSNP
rs1352550294 3409 dbSNP
rs751338717 3411 dbSNP
rs1331941551 3415 dbSNP
rs985888981 3421 dbSNP
rs375374315 3422 dbSNP
rs554899516 3424 dbSNP
rs1302813566 3443 dbSNP
rs1348813376 3445 dbSNP
rs190688807 3446 dbSNP
rs761378707 3450 dbSNP
rs916212795 3453 dbSNP
rs1205716306 3457 dbSNP
rs991071240 3458 dbSNP
rs923110435 3459 dbSNP
rs972284695 3462 dbSNP
rs1478114490 3464 dbSNP
rs1374422306 3474 dbSNP
rs1417022227 3477 dbSNP
rs576051224 3494 dbSNP
rs112824111 3495 dbSNP
rs1016155591 3496 dbSNP
rs112062624 3497 dbSNP
rs1402325204 3503 dbSNP
rs1438656151 3504 dbSNP
rs1325225619 3506 dbSNP
rs1157819933 3510 dbSNP
rs1417784406 3517 dbSNP
rs1268611826 3523 dbSNP
rs1339025095 3524 dbSNP
rs1219588185 3525 dbSNP
rs1260419918 3527 dbSNP
rs1333253498 3543 dbSNP
rs1416610266 3548 dbSNP
rs1213624284 3551 dbSNP
rs1189036547 3554 dbSNP
rs1274423341 3573 dbSNP
rs1451663572 3577 dbSNP
rs1200433353 3582 dbSNP
rs1239976768 3583 dbSNP
rs1474897832 3598 dbSNP
rs539237196 3609 dbSNP
rs185678286 3612 dbSNP
rs1425526485 3613 dbSNP
rs966851630 3614 dbSNP
rs1030850251 3620 dbSNP
rs1034385578 3627 dbSNP
rs1196093472 3637 dbSNP
rs554127643 3638 dbSNP
rs1260212544 3639 dbSNP
rs1400854542 3656 dbSNP
rs7250297 3658 dbSNP
rs1017566700 3661 dbSNP
rs1211073255 3662 dbSNP
rs1359126237 3662 dbSNP
rs1281558253 3663 dbSNP
rs556263056 3665 dbSNP
rs1264952921 3668 dbSNP
rs140782275 3674 dbSNP
rs570037350 3691 dbSNP
rs893306671 3692 dbSNP
rs551977503 3697 dbSNP
rs1048280890 3700 dbSNP
rs1384351381 3701 dbSNP
rs1420458501 3703 dbSNP
rs755668934 3705 dbSNP
rs1300266183 3709 dbSNP
rs533369470 3718 dbSNP
rs1362233507 3719 dbSNP
rs1313927841 3726 dbSNP
rs528294841 3734 dbSNP
rs559541088 3739 dbSNP
rs1237544532 3746 dbSNP
rs1046578184 3752 dbSNP
rs1352311333 3765 dbSNP
rs888768161 3769 dbSNP
rs1240299836 3779 dbSNP
rs1287675259 3782 dbSNP
rs1397278361 3786 dbSNP
rs1166250311 3790 dbSNP
rs1050537309 3796 dbSNP
rs1461427022 3803 dbSNP
rs949123746 3805 dbSNP
rs916312503 3818 dbSNP
rs1179566564 3819 dbSNP
rs1363215024 3828 dbSNP
rs1440374121 3829 dbSNP
rs112524841 3830 dbSNP
rs1393460667 3831 dbSNP
rs1429269981 3832 dbSNP
rs1303734875 3852 dbSNP
rs1404809567 3857 dbSNP
rs760642960 3863 dbSNP
rs752890573 3864 dbSNP
rs1489523411 3867 dbSNP
rs768126821 3873 dbSNP
rs978318293 3880 dbSNP
rs370975359 3884 dbSNP
rs1256292261 3896 dbSNP
rs971848490 3901 dbSNP
rs1346845600 3904 dbSNP
rs529494945 3905 dbSNP
rs909085678 3906 dbSNP
rs1237461705 3907 dbSNP
rs1458184238 3913 dbSNP
rs1180538058 3914 dbSNP
rs1251237850 3915 dbSNP
rs984699360 3919 dbSNP
rs577071740 3920 dbSNP
rs1034337728 3925 dbSNP
rs981828590 3926 dbSNP
rs1401596559 3927 dbSNP
rs1307671352 3931 dbSNP
rs1449666814 3931 dbSNP
rs1294448330 3932 dbSNP
rs1332716149 3933 dbSNP
rs1380212777 3942 dbSNP
rs1385788151 3946 dbSNP
rs1018091647 3953 dbSNP
rs1332505355 3956 dbSNP
rs1372516092 3957 dbSNP
rs561390306 3958 dbSNP
rs1257214546 3959 dbSNP
rs952022986 3966 dbSNP
rs1020746897 3971 dbSNP
rs1200464650 3973 dbSNP
rs1271271734 3974 dbSNP
rs376439065 3977 dbSNP
rs1440809140 3979 dbSNP
rs1191885003 3982 dbSNP
rs893296837 3987 dbSNP
rs896924951 3987 dbSNP
rs1392922456 4000 dbSNP
rs780957422 4001 dbSNP
rs543039252 4002 dbSNP
rs1046265272 4005 dbSNP
rs1462832492 4009 dbSNP
rs1013828640 4012 dbSNP
rs760133686 4014 dbSNP
rs1033168209 4028 dbSNP
rs894925874 4033 dbSNP
rs1392371823 4044 dbSNP
rs1054863993 4045 dbSNP
rs1168561605 4051 dbSNP
rs1277265761 4051 dbSNP
rs1340894844 4057 dbSNP
rs556657252 4061 dbSNP
rs1007077426 4062 dbSNP
rs1042672700 4063 dbSNP
rs746821655 4070 dbSNP
rs1267314109 4075 dbSNP
rs1484977223 4078 dbSNP
rs1216158891 4086 dbSNP
rs115802649 4087 dbSNP
rs1478993890 4089 dbSNP
rs1051364344 4090 dbSNP
rs111765643 4094 dbSNP
rs1413658744 4114 dbSNP
rs367985889 4121 dbSNP
rs923517875 4121 dbSNP
rs1164799411 4131 dbSNP
rs976304431 4133 dbSNP
rs932946851 4150 dbSNP
rs1297189456 4151 dbSNP
rs965223123 4161 dbSNP
rs1401571780 4162 dbSNP
rs910653109 4163 dbSNP
rs1197295338 4166 dbSNP
rs375075661 4171 dbSNP
rs1314847472 4172 dbSNP
rs952055400 4177 dbSNP
rs1239579309 4178 dbSNP
rs1286972087 4180 dbSNP
rs193065427 4184 dbSNP
rs1209117778 4203 dbSNP
rs1349678917 4211 dbSNP
rs1483828457 4213 dbSNP
rs1026232346 4214 dbSNP
rs1303409097 4235 dbSNP
rs993902126 4237 dbSNP
rs901512212 4239 dbSNP
rs1380474416 4242 dbSNP
rs1331500584 4243 dbSNP
rs545851212 4244 dbSNP
rs1358355260 4245 dbSNP
rs1448554681 4255 dbSNP
rs1304490314 4260 dbSNP
rs1371144443 4268 dbSNP
rs1013444708 4271 dbSNP
rs144214196 4276 dbSNP
rs60750746 4276 dbSNP
rs1356053998 4277 dbSNP
rs370687730 4283 dbSNP
rs1232378509 4297 dbSNP
rs1278271355 4298 dbSNP
rs1054895189 4300 dbSNP
rs1231643035 4303 dbSNP
rs1457726780 4305 dbSNP
rs1177403731 4306 dbSNP
rs142972798 4307 dbSNP
rs1238252602 4315 dbSNP
rs940456799 4317 dbSNP
rs1296868215 4331 dbSNP
rs1170430281 4336 dbSNP
rs1424089346 4336 dbSNP
rs1000586136 4337 dbSNP
rs909033384 4351 dbSNP
rs984648555 4370 dbSNP
rs1042117301 4373 dbSNP
rs1452691703 4376 dbSNP
rs1363121294 4382 dbSNP
rs148570462 4383 dbSNP
rs902114319 4385 dbSNP
rs117805167 4386 dbSNP
rs1183870523 4389 dbSNP
rs1274468475 4395 dbSNP
rs73023850 4396 dbSNP
rs1221241707 4397 dbSNP
rs1249547228 4404 dbSNP
rs572648694 4416 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aaGGUGACGAUGUUGGAGGG-UCu 5'
            |: ||||  ||:|||||| || 
Target 5' uuCUCCUGCCUCAGCCUCCCGAGu 3'
13 - 36
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000402377.3 | 3UTR | AGGUUCAAGGGAUUCUCCUGCCUCAGCCUCCCGAGUAGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC 0.998 0.02 1.000 0.5 3 Click to see details
HNSC 0.998 0.02 1.000 0.5 3 Click to see details
HNSC 0.998 0.02 1.000 0.5 3 Click to see details
HNSC 0.998 0.02 1.000 0.5 3 Click to see details
HNSC 0.998 0.02 1.000 0.5 3 Click to see details
HNSC 0.998 0.02 1.000 0.5 3 Click to see details
HNSC 0.998 0.02 1.000 0.5 3 Click to see details
HNSC 0.998 0.02 1.000 0.5 3 Click to see details
HNSC 0.998 0.02 1.000 0.5 3 Click to see details
167 hsa-miR-3192-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058548 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT139892 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT207395 MAT2A methionine adenosyltransferase 2A 2 6
MIRT294640 ZNF548 zinc finger protein 548 2 2
MIRT324251 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT441475 BEST3 bestrophin 3 2 2
MIRT445233 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT446763 ZNF491 zinc finger protein 491 2 2
MIRT451003 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 2
MIRT452436 QDPR quinoid dihydropteridine reductase 2 2
MIRT452582 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452950 DISC1 disrupted in schizophrenia 1 2 2
MIRT453309 ZNF394 zinc finger protein 394 2 2
MIRT453810 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT454101 TMEM209 transmembrane protein 209 2 2
MIRT456228 LIX1L limb and CNS expressed 1 like 2 4
MIRT456738 TMEM239 transmembrane protein 239 2 2
MIRT456806 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT457499 SLC35F6 solute carrier family 35 member F6 2 2
MIRT458037 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459041 ZNF490 zinc finger protein 490 2 2
MIRT459135 FADS6 fatty acid desaturase 6 2 2
MIRT460126 CXCL16 C-X-C motif chemokine ligand 16 2 2
MIRT460506 FAM105A family with sequence similarity 105 member A 2 6
MIRT460944 NOA1 nitric oxide associated 1 2 4
MIRT461101 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462641 PHF5A PHD finger protein 5A 2 2
MIRT463584 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466567 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467090 SRRD SRR1 domain containing 2 2
MIRT471093 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472596 NACC1 nucleus accumbens associated 1 2 2
MIRT473084 MORN4 MORN repeat containing 4 2 2
MIRT475977 GTPBP2 GTP binding protein 2 2 2
MIRT477054 FAM210A family with sequence similarity 210 member A 2 2
MIRT478303 DDX19A DEAD-box helicase 19A 2 4
MIRT478489 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478500 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT478858 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479096 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479180 CLSPN claspin 2 2
MIRT479215 CLCC1 chloride channel CLIC like 1 2 2
MIRT481176 AVL9 AVL9 cell migration associated 2 6
MIRT483032 KHSRP KH-type splicing regulatory protein 2 4
MIRT485150 RASL10B RAS like family 10 member B 2 2
MIRT486104 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486319 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT489443 IFNLR1 interferon lambda receptor 1 2 2
MIRT489585 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489702 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490184 TMEM63C transmembrane protein 63C 2 2
MIRT491211 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491276 DHX40 DEAH-box helicase 40 2 2
MIRT495162 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495222 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT496820 CHRNB2 cholinergic receptor nicotinic beta 2 subunit 2 2
MIRT498602 KRT8 keratin 8 2 2
MIRT500003 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT502065 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT508197 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508477 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT509635 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT511039 NRF1 nuclear respiratory factor 1 2 2
MIRT516684 ZNF860 zinc finger protein 860 2 4
MIRT518394 ZNF250 zinc finger protein 250 2 2
MIRT518907 CDC14B cell division cycle 14B 2 2
MIRT520502 TRAM2 translocation associated membrane protein 2 2 6
MIRT521459 RAD51 RAD51 recombinase 2 2
MIRT522354 NCKIPSD NCK interacting protein with SH3 domain 2 4
MIRT522594 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT523267 HIST1H2AE histone cluster 1 H2A family member e 2 2
MIRT523532 GLUL glutamate-ammonia ligase 2 4
MIRT524186 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT526842 PHC1 polyhomeotic homolog 1 2 2
MIRT528729 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT540695 BMP3 bone morphogenetic protein 3 2 2
MIRT544483 TRIM4 tripartite motif containing 4 2 2
MIRT551566 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT563619 ZNF277 zinc finger protein 277 2 2
MIRT564467 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565031 VAV2 vav guanine nucleotide exchange factor 2 2 2
MIRT570294 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT572932 VDAC2 voltage dependent anion channel 2 2 2
MIRT573501 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573675 HES6 hes family bHLH transcription factor 6 2 2
MIRT609619 TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein 2 2
MIRT611966 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT613930 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT617733 ATCAY ATCAY, caytaxin 2 4
MIRT618878 MBL2 mannose binding lectin 2 2 2
MIRT627590 SHROOM3 shroom family member 3 2 2
MIRT628516 ZNF878 zinc finger protein 878 2 2
MIRT633964 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT634530 NEGR1 neuronal growth regulator 1 2 2
MIRT635455 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT636412 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT639672 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642667 RGS6 regulator of G protein signaling 6 2 2
MIRT644080 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT647318 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647942 RNF152 ring finger protein 152 2 2
MIRT648687 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT648817 ZNF689 zinc finger protein 689 2 2
MIRT650347 TREM1 triggering receptor expressed on myeloid cells 1 2 2
MIRT650374 MOCS3 molybdenum cofactor synthesis 3 2 4
MIRT655935 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT663778 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT664297 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT665842 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT668929 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT669673 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669907 KIAA0754 KIAA0754 2 4
MIRT670248 TRIM13 tripartite motif containing 13 2 2
MIRT670368 ULBP3 UL16 binding protein 3 2 4
MIRT670642 BVES blood vessel epicardial substance 2 2
MIRT670749 HOOK3 hook microtubule tethering protein 3 2 2
MIRT671184 ZNF891 zinc finger protein 891 2 2
MIRT673946 ZNF500 zinc finger protein 500 2 2
MIRT674682 PLCE1 phospholipase C epsilon 1 2 2
MIRT677912 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678876 FAM118A family with sequence similarity 118 member A 2 2
MIRT679528 RAB36 RAB36, member RAS oncogene family 2 2
MIRT680589 ZNF573 zinc finger protein 573 2 2
MIRT680650 KIAA1456 KIAA1456 2 2
MIRT681149 INTS7 integrator complex subunit 7 2 2
MIRT681177 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681234 DUSP19 dual specificity phosphatase 19 2 2
MIRT681626 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681643 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT681926 KAT7 lysine acetyltransferase 7 2 2
MIRT682050 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT682156 SMS spermine synthase 2 2
MIRT683555 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684304 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT684458 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT685986 CCDC77 coiled-coil domain containing 77 2 2
MIRT686782 AZF1 azoospermia factor 1 2 2
MIRT687329 OSMR oncostatin M receptor 2 2
MIRT687629 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT688792 CCNB1 cyclin B1 2 2
MIRT689756 PRR13 proline rich 13 2 2
MIRT690823 SGSM2 small G protein signaling modulator 2 2 2
MIRT691310 ZNF681 zinc finger protein 681 2 2
MIRT692676 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT693508 MOB3A MOB kinase activator 3A 2 2
MIRT694657 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694889 ZNF417 zinc finger protein 417 2 2
MIRT695740 ZNF117 zinc finger protein 117 2 2
MIRT697101 GPKOW G-patch domain and KOW motifs 2 2
MIRT698968 SPAST spastin 2 2
MIRT700379 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT703930 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT706234 SYT15 synaptotagmin 15 2 2
MIRT706494 SEPT6 septin 6 2 2
MIRT710451 BTNL3 butyrophilin like 3 2 2
MIRT711684 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT711997 F9 coagulation factor IX 2 2
MIRT712727 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713111 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT713156 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT713440 AJAP1 adherens junctions associated protein 1 2 2
MIRT713830 NUP98 nucleoporin 98 2 2
MIRT714979 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717411 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT718433 ZNF85 zinc finger protein 85 2 2
MIRT720575 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT725098 TMEM120B transmembrane protein 120B 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3192 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3192 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3192 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3192-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3192-5p Platinum 23939 resistant tissue
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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