miRTarBase - #MIRT692969


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pre-miRNA Information
pre-miRNA hsa-mir-378f   
Genomic Coordinates chr1: 23929070 - 23929147
Description Homo sapiens miR-378f stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-378f
Sequence 52| ACUGGACUUGGAGCCAGAAG |71
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 18 1 + 23929138 29233923 MiREDiBase
A-to-I 19 1 + 23929139 29233923 MiREDiBase
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LGSN   
Synonyms GLULD1, LGS
Description lengsin, lens protein with glutamine synthetase domain
Transcript NM_001143940   
Other Transcripts NM_016571   
Expression
Putative miRNA Targets on LGSN
3'UTR of LGSN
(miRNA target sites are highlighted)		 
>LGSN|NM_001143940|3'UTR
   1 AGCACTCTGCTGCGCTCAGCTGCCTGATGGCGCCTTCTGTTAGCTGCCGAAAGCGTTATTCCAAGGACAGGAAAGACCTG
  81 AAGAAGAGTGTGCCTACAACATGGGGATACAATGACAACAGCTGTATATTTAATATCAAATGTCATGGAGAGAAAGGCAC
 161 CCGGATAGAAAATAAACTAGGCTCAGCAACAGCAAACCCTTACTTGGTGCTGGCTGCAACTGTTGCTGCCGGCTTAGATG
 241 GACTTCATAGCAGTAATGAGGTCTTGGCTGGTCCAGATGAGAGCACAGACTTTTACCAAGTGGAACCTTCTGAGATCCCT
 321 TTAAAACTAGAAGATGCCCTTGTGGCACTGGAAGAAGATCAATGCCTGAGACAGGCTCTAGGAGAAACCTTTATTCGATA
 401 TTTTGTTGCCATGAAGAAATATGAGTTGGAGAATGAAGAAATAGCTGCAGAGAGAAATAAATTCTTAGAGTATTTTATTT
 481 AGAATAGAGCTCACAACTACTCCTTTAGACATGTAATTGTTACTTAAAGCTAATCTACCAAAACAAAAAGACTGAACTTT
 561 TGTAATTAACAACAGCAACAATAACAAGATTACGAATGCTTTTGACTTTTTTTTTTGTCCATGGAATATTTGACAGATGA
 641 AGTAGGACTGCTGAGAAGATTCTGATAACAGAAACAAACAACAAAGTTGTGGTGAAGCTATAATATGCAAACTTACCAGA
 721 TCTTGTCAGTCATTTCCTATGTGTATGTTGACCTGGATAAGAATATCCAATTTTGGGTGGCAATAAATATATTCGCACAT
 801 TAAGAAAAAAAAGACTTAAGCATTAGAAAGCAAAATTTAAATGACTAAAAAAGAAAAAAAAGAAAAGGAGAAAAAATTTT
 881 AATGGTACACATAGGTTATGATTTCCAGGGAGACAAATATACTAATATAGTCTCGCTAATCAAATAATATTGTGAATCCA
 961 GGTTGTATGCACCATTATGGTCTTTCTAAACAAGTTAAATAAACTTTTGCCAAAATATAATGACAGGTAGGCAGTTTTCC
1041 CCTAAGTCTCTTCTCTTTTCACCCTTCTCCACTAGCTCCTGAAAAGCTTATGAACTTCAAGGTTATAATGTCCTCAAGAA
1121 ACAAATCCCTAAGGAATAGAATTGGAGCTGAGAACAACGAGGTCAGATTTTAAAAGTAGTTAAAGCCTTTCTTTTAACAA
1201 TGCCTCATATAGAAGTTCAATACACAAAGTATAGATAGAAAGATGTTTGTGTGTGAGGGTAGGTGGGCTCTGTCTACTCT
1281 GCTTCATTCTTTGAAACTAGATGTTCCTCTGAAACCTCTAGTGCTCTGTGGAGTGTGAGAACAACTGCCTGGCTAGCCAG
1361 GGCTATGTTTGGAGTTTAAGTTTGTTATTCAAATTACTGAATCTGCTGCTCACAGAGGTTGGTACCTCCCCAGAGAATAT
1441 TACCTGTTCCAGGCCTTTGTTTGAATGAGATAATATTGTAACTATCACAAAAGTTTAGCTGCTTTTGGGAAGAAGTCCAA
1521 AATCCACTTACTAGCAAATGAAACATTATTCTACTGCTTAGGATCAAACAGCAGATTTTATGTTCAATTAAAACTGACTG
1601 TAGTCTCAATTTAGATAGCAATTGCACAAGCAGAGGATTAGAATTTGGCTCAGATCCTCTTATTAAAATTCATATTACTC
1681 AGTAGCTTAAATAGTGAAAGTCAGTCTATCCTTCACTAATTACTCCCTTCTTTTTTCCTTTGAGCAGGAGAAGTGTGTTT
1761 GGATACATAAGAAGAAAGTTCCCAGCACTTTGGGAGGCCAAGGCAGGAGGATTGCTTGAGGCCAGGAGTTTGAGTCCAGC
1841 CTGGACCACATAGTGAGACCCCTGTTTCTACAAAAAAAAAAAAAAAAATGCCTCGCATGGTGGCACATGCCTGTAGTCCC
1921 AGCTACGTGGGAGGCTGAGAAGGGAGGATCGCTTGAGCCTGGGAGTTTCAGGCTGCAGTGAGCCATAATCACACCACTGC
2001 ACTCCAGCTTGGGTGACAGAGTGAGACACTGTCTTAAAAAAAAGAGAAGAATAAAATTCATGGATGCATATGGGGTAGAG
2081 AGAAAGATAGTGTAGGGTAGCTGGGGGAAGGAAGGGAACCTGTCCTGAAACCTCCAGAATGAAATCCCACACATTACATC
2161 ATGGGAGGGATAAGGAAGACTCTCATGCCAATTTTCTAGCTGTCTGCTAGAAAATTCCCCTCTGTTCATTTTCCCCTCTG
2241 TTCTCAGTAATAAAACCTCAATATGTTCTTTGAAAGCAATGAAAAATGAAATGATATTTCTGAGCCTTCATTAAGGTTGG
2321 ATGTGGTCATGTTATTAGGTTCAGTGCAAAGAGGTGAAAGTAGAAGTGTTGCATATAAGTTCTTTAGGACATTTTCTTTT
2401 CTTTTCTTGTATTTTTTTTTTTTTTCCGAGATGGAGTCTCGCTTTGTCACCCAGGCTGAAGTGCAATGTGGGGGGGTCTT
2481 GGCTCACTGCAACCTCTGCCCCCTGGGTTCAAGTAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATCCCAGGTGCCT
2561 GCTACCATGCCTGGCCTTTTAGTAGAGATGGGGTTTCACCATATTGGCCAGTCTGGTCTTGAACTCCTGAACTCAGGTGA
2641 TCAGCCTGCCTTGGCCTCCCAAAGTGCTAGGATTACAGGCATGAGCCACCATGCCCTACCACACTTTAGAACATTTTTTT
2721 AAATGACGGATGCTGTGTGCTCTGCCCTTTCTTTCTCTTGCTGCCTTCACCCTTCCTGCTGAGTGGCCTACAGATAATGT
2801 GGCTAGGATTATGTCCTTGGGAAGGGAGGTTTGCTCCACAGGGTACAGTAATAAGGTGGAATCTCTGCTTTGTAGAGCAG
2881 TTTGACTTGCCTACATCCAGATGTTTACCTGAGAGAGAACCAAACTTCTATCTTCTTTAAGCCACAATGATTTTGATTCT
2961 TTGTTAGTTGCAATGAAATTTATTTTCTCTTTTCCATGTGTGTGTTGTATGTGTGTTTGTGTGTGAGTGTGTGCATATGA
3041 GTGGGGAATTTGAGGGATTTGGGGATGAAAGAACAAAGGTATAAGAACCAGTGAAAGACGACTTCCTCAATATTCCCACT
3121 TCTAGAGAGGATAATCTGAGTTAATCAAAGGGATCCACACATCCAAAAAATGGGATTGGCTCTAACCCATCCCTATAAAG
3201 TGGCATATCCCTTTATAGTCCACGGGCCTTAATGAAACATGTCTAATGCATTGACTTCATTTTACCATAATGAGTAAAGA
3281 TGCTGTAAAAAGTCTGATAATCACAGTGTTTGAAGCCGTTTTTTCCCCTTTCGCATTATTAGCATAACTTAAAAACACAG
3361 TACTCAGGATGCCATGTGAAGGAATTATATAACTAGGAATATTATCTTCAGTATTAAGTGTACAGTCGTGAGTCAAAGAA
3441 AATATTCAGCCATAGATTACAAATCAGTTGATAACGTAAGTTGGTGTGGCAGTTTCCACCAAGATTTCAGTTAGGTGTGT
3521 GCTGATGTATATTCTTGTTCTTTAAGGCAACCCAAAAAGAGGCATTGGCCAGCAGAGTTCAGGGCCAAAGACAAATTGGG
3601 GTAGGTACATGTAAAAATCAGTTATCTATTTTTCTATTTCTTTCATCTGTTCATAGGCTTTCTATTGTTGAAAGGACTTT
3681 CTGCTGATGCTTCTACCTTCTTGGTCTGGGTTAAGAGGGTCAGACATTCATTCAGCAGCACTTATTGAGCACCATTTGTG
3761 TGCTAAGCCTTCAGCTGGGAGCCATCATACTAGGGGAGACCAAAACAAAGATGAGCAGACAATGAAAGAGTTTTGGATCT
3841 GTGTATCTTAAGCAGAACATAAATAATTTTTTTTGTAGACCTAATGCTGAAAAAAGCTATTTGGAAAGCTTCTTTATGGC
3921 TCGAAAAGGGTGCCTTATAAATAGCTTTACAAAAATTGCTTTCTTATTTTCATTTACTATAATTGTTCTAATCAAAGCTT
4001 AGGGGAAAAATGTGATTACTGAATTTAAAGTTGGTAATTAAATGAGTATACATAAGAAATGTAAATTAAAAGCGATAATA
4081 TTTTAAGACTAGAAATTAAAACATTAGTATTGTAGTAACAAGTTTCTATTTTCAAGGACATTCTATAATCTAAAATTTCA
4161 TTTTACAGTGTGTGAATAACAACAACGCTTGAAATGATTATTTGAAGGCAATGAAAGATCAAAAAACTTTAATCTGAATA
4241 AAAATTGAAAGCATACAGTGAAGTCTGAGCTTATCAGTAAAACAGAACAGTCTATTGACATATCTCCAGTCACCTGTTTG
4321 ACAAAATACACTCACCAATATGTTTATGATATAGGTATGACTGGACAATACCTTTAACCTTGGGTTTTCTATGACAGGGG
4401 TAAGAATTTGTGTCTTTAAACATTACCTATGTGCACAGTGCCTTCCCTGTTAAAGCTCTTCTCATGCTGCCTATAATTAG
4481 GGGTTTACATGATACTTCCTAATTGCTAATTAGGATGTGAATTCTCAGAATAAAAGGTACAGATCTTACTTA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaaGACC-GAGGUUCAGGUCa 5'
             | ||  |:::||||||| 
Target 5' ggcCAGGAGTTTGAGTCCAGc 3'
 1820 - 1840 149.00 -14.60
2 
miRNA  3' gaAG-ACCGAGGUUCAGGUCa 5'
            || |||||   :|||||| 
Target 5' ggTCTTGGCT---GGTCCAGa 3'
 260 - 277 139.00 -16.00
3 
miRNA  3' gaaGACCG--AGGUUCAGGUCa 5'
             :||||   | :|||:||| 
Target 5' gcaTTGGCCAGCAGAGTTCAGg 3'
 3562 - 3583 135.00 -14.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
783466 277 ClinVar
COSM5035807 9 COSMIC
COSM451709 10 COSMIC
COSM238558 13 COSMIC
COSM240484 13 COSMIC
COSM7307507 14 COSMIC
COSM5357233 15 COSMIC
COSM7970110 20 COSMIC
COSM743376 21 COSMIC
COSM2153177 23 COSMIC
COSM5474961 25 COSMIC
COSM321385 28 COSMIC
COSM8810549 28 COSMIC
COSM272887 32 COSMIC
COSM9347576 43 COSMIC
COSM7276890 45 COSMIC
COSM9746650 47 COSMIC
COSM3160168 48 COSMIC
COSM1080925 49 COSMIC
COSM4435285 54 COSMIC
COSM7211368 54 COSMIC
COSM7544217 55 COSMIC
COSM9645889 65 COSMIC
COSM3922056 66 COSMIC
COSM6881293 70 COSMIC
COSM8029554 71 COSMIC
COSM379731 78 COSMIC
COSM6174788 79 COSMIC
COSM234908 83 COSMIC
COSM7000271 86 COSMIC
COSM9389266 96 COSMIC
COSM124097 103 COSMIC
COSM3735711 103 COSMIC
COSM1672538 105 COSMIC
COSM743377 105 COSMIC
COSM3629162 106 COSMIC
COSM1131817 109 COSMIC
COSM8782512 114 COSMIC
COSM7805801 118 COSMIC
COSM9193936 118 COSMIC
COSM1080923 121 COSMIC
COSM360188 121 COSMIC
COSM8581668 125 COSMIC
COSM7479873 137 COSMIC
COSM8769337 141 COSMIC
COSM9443399 150 COSMIC
COSM3720517 156 COSMIC
COSM3160164 159 COSMIC
COSM5955902 166 COSMIC
COSM1724095 168 COSMIC
COSM3629161 169 COSMIC
COSM8207498 189 COSMIC
COSM9444491 198 COSMIC
COSM3629160 199 COSMIC
COSM7479621 199 COSMIC
COSM3629159 203 COSMIC
COSM3830919 207 COSMIC
COSM7463167 210 COSMIC
COSM9015814 219 COSMIC
COSM9625348 220 COSMIC
COSM7765263 224 COSMIC
COSM3941814 225 COSMIC
COSM451708 230 COSMIC
COSM1672537 231 COSMIC
COSM1445538 232 COSMIC
COSM8755511 240 COSMIC
COSM6845874 243 COSMIC
COSM3411237 244 COSMIC
COSM3629158 246 COSMIC
COSM6496806 248 COSMIC
COSM6514112 253 COSMIC
COSM3629157 263 COSMIC
COSM5632620 270 COSMIC
COSM5898309 273 COSMIC
COSM5596973 276 COSMIC
COSM8124588 283 COSMIC
COSM8001943 288 COSMIC
COSM4525758 303 COSMIC
COSM5654079 306 COSMIC
COSM4464849 307 COSMIC
COSM9793451 308 COSMIC
COSM5405692 317 COSMIC
COSM5562494 319 COSMIC
COSM9001282 319 COSMIC
COSM240483 326 COSMIC
COSM5583707 327 COSMIC
COSM7102301 330 COSMIC
COSM3629156 333 COSMIC
COSM360187 334 COSMIC
COSM9273064 336 COSMIC
COSM3629155 338 COSMIC
COSM3629154 351 COSMIC
COSM8868885 367 COSMIC
COSM9117471 368 COSMIC
COSM9021037 370 COSMIC
COSM7463451 371 COSMIC
COSM3629153 374 COSMIC
COSM6174789 374 COSMIC
COSM8230601 378 COSMIC
COSM1292354 389 COSMIC
COSM5667730 394 COSMIC
COSM3830918 396 COSMIC
COSM226164 397 COSMIC
COSM391830 409 COSMIC
COSM3381645 410 COSMIC
COSM9664062 413 COSMIC
COSM8475843 419 COSMIC
COSM3875074 428 COSMIC
COSM4435547 429 COSMIC
COSM8766482 433 COSMIC
COSM8044062 435 COSMIC
COSM8834993 438 COSMIC
COSM8942085 443 COSMIC
COSM451707 446 COSMIC
COSM3629152 452 COSMIC
COSM6700797 452 COSMIC
COSM1080921 454 COSMIC
COSM282407 460 COSMIC
COSM3949381 464 COSMIC
COSM8297982 464 COSMIC
COSM6174790 465 COSMIC
COSM9061172 475 COSMIC
COSN26982384 484 COSMIC
COSN8514592 490 COSMIC
COSN30517714 492 COSMIC
COSN28747124 502 COSMIC
COSN30462132 502 COSMIC
COSN31556512 534 COSMIC
COSN30185273 546 COSMIC
COSN30136734 550 COSMIC
COSN30178556 554 COSMIC
COSN28745157 561 COSMIC
COSN30102104 563 COSMIC
COSN30522833 573 COSMIC
COSN30491235 588 COSMIC
COSN30182809 590 COSMIC
COSN30514401 593 COSMIC
COSN30482811 594 COSMIC
COSN31580942 605 COSMIC
COSN28890877 607 COSMIC
COSN30490273 624 COSMIC
COSN30481237 645 COSMIC
COSN31841592 646 COSMIC
COSN26516331 672 COSMIC
COSN30121703 687 COSMIC
COSN31525400 718 COSMIC
COSN26242539 794 COSMIC
COSN30115229 813 COSMIC
COSN31590421 853 COSMIC
COSN23603550 987 COSMIC
COSN22114970 1002 COSMIC
COSN31972382 1081 COSMIC
COSN31972608 1092 COSMIC
COSN31967270 1113 COSMIC
COSN24337637 1128 COSMIC
COSN20704326 1390 COSMIC
COSN26125193 1405 COSMIC
COSN8352171 1442 COSMIC
COSN19225615 1528 COSMIC
COSN25743027 1630 COSMIC
COSN2169917 1694 COSMIC
COSN26348240 2115 COSMIC
COSN29577587 2469 COSMIC
COSN22786991 2475 COSMIC
COSN15954723 2533 COSMIC
COSN7890811 2550 COSMIC
COSN6326736 2696 COSMIC
COSN27791994 2700 COSMIC
COSN17078481 3099 COSMIC
COSN24962936 3220 COSMIC
COSN27071941 3388 COSMIC
COSN17814485 3447 COSMIC
COSN20102995 3484 COSMIC
COSN20091410 3923 COSMIC
COSN32056943 4006 COSMIC
COSN29858771 4028 COSMIC
COSN23872688 4073 COSMIC
COSN17182925 4143 COSMIC
COSN2169916 4305 COSMIC
COSN4920268 4365 COSMIC
COSN29254379 4469 COSMIC
COSN9801358 4536 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs144459161 9 dbSNP
rs973905064 10 dbSNP
rs904461912 11 dbSNP
rs545321243 12 dbSNP
rs149261817 13 dbSNP
rs138743031 14 dbSNP
rs1195278213 15 dbSNP
rs760167561 17 dbSNP
rs556357153 21 dbSNP
rs894483931 22 dbSNP
rs745545025 23 dbSNP
rs754238083 25 dbSNP
rs1057109766 28 dbSNP
rs754696624 30 dbSNP
rs770094043 31 dbSNP
rs61758980 32 dbSNP
rs755451131 37 dbSNP
rs747095303 41 dbSNP
rs143202391 44 dbSNP
rs1272318612 45 dbSNP
rs1329701342 48 dbSNP
rs139295115 49 dbSNP
rs1274058076 51 dbSNP
rs1405750053 53 dbSNP
rs750728334 54 dbSNP
rs765583125 55 dbSNP
rs777736688 59 dbSNP
rs1476058013 60 dbSNP
rs765990432 62 dbSNP
rs757079627 65 dbSNP
rs1420320865 69 dbSNP
rs1169520874 75 dbSNP
rs1477033054 77 dbSNP
rs753691249 78 dbSNP
rs1199353542 88 dbSNP
rs200451174 91 dbSNP
rs764036960 93 dbSNP
rs760589652 94 dbSNP
rs1416681649 96 dbSNP
rs1204039737 97 dbSNP
rs775032439 99 dbSNP
rs574022940 104 dbSNP
rs759108784 106 dbSNP
rs773951641 108 dbSNP
rs1274609182 109 dbSNP
rs1384052741 110 dbSNP
rs770572076 124 dbSNP
rs1345589771 125 dbSNP
rs1268350198 126 dbSNP
rs1429888978 126 dbSNP
rs748450415 128 dbSNP
rs777035496 133 dbSNP
rs1409458141 134 dbSNP
rs769198728 141 dbSNP
rs976085996 145 dbSNP
rs1359886830 146 dbSNP
rs747513021 154 dbSNP
rs780163823 157 dbSNP
rs1412654802 159 dbSNP
rs1401468597 161 dbSNP
rs146898925 162 dbSNP
rs199883532 163 dbSNP
rs141116378 164 dbSNP
rs753673176 166 dbSNP
rs996370606 172 dbSNP
rs763833723 179 dbSNP
rs900698323 197 dbSNP
rs1040530696 198 dbSNP
rs756054217 199 dbSNP
rs752528196 201 dbSNP
rs1278490533 205 dbSNP
rs1160966855 206 dbSNP
rs767520203 207 dbSNP
rs144270118 208 dbSNP
rs773859678 212 dbSNP
rs765999519 213 dbSNP
rs1228011198 216 dbSNP
rs752845847 217 dbSNP
rs777026495 218 dbSNP
rs1445849886 222 dbSNP
rs200745425 223 dbSNP
rs572903370 230 dbSNP
rs775824383 231 dbSNP
rs1470921513 232 dbSNP
rs977253727 237 dbSNP
rs968975103 238 dbSNP
rs1162824559 241 dbSNP
rs755999563 248 dbSNP
rs772637364 250 dbSNP
rs745887094 251 dbSNP
rs143668006 252 dbSNP
rs779193711 253 dbSNP
rs1416670023 255 dbSNP
rs148942590 257 dbSNP
rs778077271 260 dbSNP
rs1184738102 261 dbSNP
rs1463101742 263 dbSNP
rs1266591246 268 dbSNP
rs1208547734 269 dbSNP
rs755825048 270 dbSNP
rs1012795214 274 dbSNP
rs35039535 277 dbSNP
rs780929610 278 dbSNP
rs1378448143 283 dbSNP
rs754962353 284 dbSNP
rs751060903 285 dbSNP
rs1363009190 286 dbSNP
rs201490688 297 dbSNP
rs762574500 298 dbSNP
rs749998186 300 dbSNP
rs755201172 306 dbSNP
rs184204164 307 dbSNP
rs775938084 309 dbSNP
rs867851031 310 dbSNP
rs1164976956 312 dbSNP
rs3846795 314 dbSNP
rs760190481 316 dbSNP
rs1183824821 317 dbSNP
rs1186476734 318 dbSNP
rs373679612 331 dbSNP
rs144780462 332 dbSNP
rs749416344 333 dbSNP
rs1323378910 336 dbSNP
rs1219626148 337 dbSNP
rs777791544 340 dbSNP
rs942966169 341 dbSNP
rs770064379 342 dbSNP
rs531455070 343 dbSNP
rs781105812 348 dbSNP
rs1296700418 356 dbSNP
rs766931122 357 dbSNP
rs760630477 359 dbSNP
rs751549413 360 dbSNP
rs779992075 363 dbSNP
rs371753952 364 dbSNP
rs749958325 366 dbSNP
rs1304606138 372 dbSNP
rs764739060 373 dbSNP
rs1389013336 374 dbSNP
rs916438780 375 dbSNP
rs761586040 376 dbSNP
rs753000600 377 dbSNP
rs768036882 378 dbSNP
rs1490295810 379 dbSNP
rs759998827 381 dbSNP
rs1413072066 382 dbSNP
rs774957586 388 dbSNP
rs1397677250 389 dbSNP
rs766996333 392 dbSNP
rs762882830 394 dbSNP
rs371133744 396 dbSNP
rs748439660 397 dbSNP
rs1278097621 405 dbSNP
rs776385075 407 dbSNP
rs62414973 409 dbSNP
rs1345945959 410 dbSNP
rs1051452170 411 dbSNP
rs746841642 416 dbSNP
rs779903976 420 dbSNP
rs1369383680 425 dbSNP
rs146493551 426 dbSNP
rs1462914558 428 dbSNP
rs745357482 429 dbSNP
rs1181690453 432 dbSNP
rs778553536 442 dbSNP
rs1174614949 444 dbSNP
rs756831246 445 dbSNP
rs753479275 454 dbSNP
rs773380883 456 dbSNP
rs977577171 463 dbSNP
rs1249872798 464 dbSNP
rs376351902 466 dbSNP
rs1481670506 468 dbSNP
rs1254131329 477 dbSNP
rs977743643 477 dbSNP
rs755326874 479 dbSNP
rs751986002 484 dbSNP
rs766975664 492 dbSNP
rs1393262203 494 dbSNP
rs1226182300 495 dbSNP
rs1334841308 496 dbSNP
rs763580225 497 dbSNP
rs773130503 502 dbSNP
rs371895089 504 dbSNP
rs1376353881 508 dbSNP
rs765404518 509 dbSNP
rs1469791850 510 dbSNP
rs761823839 511 dbSNP
rs1179087040 513 dbSNP
rs367748800 514 dbSNP
rs549044914 519 dbSNP
rs1363389062 524 dbSNP
rs967657282 524 dbSNP
rs746752150 527 dbSNP
rs1021902306 529 dbSNP
rs775322493 530 dbSNP
rs149863924 532 dbSNP
rs1280794409 550 dbSNP
rs1369511470 561 dbSNP
rs112740986 563 dbSNP
rs1228953756 568 dbSNP
rs1403737246 569 dbSNP
rs1270210815 575 dbSNP
rs900249337 579 dbSNP
rs1193672543 584 dbSNP
rs1350579129 593 dbSNP
rs527322894 594 dbSNP
rs991364950 597 dbSNP
rs958639793 608 dbSNP
rs1035644355 609 dbSNP
rs79900249 616 dbSNP
rs1019568155 617 dbSNP
rs1193816966 617 dbSNP
rs1373678677 617 dbSNP
rs1394740114 620 dbSNP
rs1167762941 621 dbSNP
rs1166347715 642 dbSNP
rs1466989758 644 dbSNP
rs1009035444 646 dbSNP
rs886693431 675 dbSNP
rs560145317 682 dbSNP
rs951476498 686 dbSNP
rs1480127543 689 dbSNP
rs1412820697 692 dbSNP
rs77713411 719 dbSNP
rs1325332736 721 dbSNP
rs1436331374 730 dbSNP
rs1249554653 731 dbSNP
rs533231903 732 dbSNP
rs1224666489 736 dbSNP
rs996002858 744 dbSNP
rs1200882287 745 dbSNP
rs139988588 747 dbSNP
rs1335144640 751 dbSNP
rs1039933038 752 dbSNP
rs150681830 768 dbSNP
rs1486743681 770 dbSNP
rs891412311 773 dbSNP
rs573765918 787 dbSNP
rs948849846 794 dbSNP
rs543906328 795 dbSNP
rs368122849 796 dbSNP
rs1236421373 798 dbSNP
rs372448108 799 dbSNP
rs1334411564 800 dbSNP
rs1396905207 801 dbSNP
rs1408799852 802 dbSNP
rs1335255091 804 dbSNP
rs1420272084 812 dbSNP
rs1056700767 813 dbSNP
rs932962294 822 dbSNP
rs762167169 853 dbSNP
rs1455725233 855 dbSNP
rs1384960950 862 dbSNP
rs939172483 862 dbSNP
rs1160439213 864 dbSNP
rs1380016446 868 dbSNP
rs1468786038 868 dbSNP
rs1314120177 877 dbSNP
rs1355549300 878 dbSNP
rs1413746270 889 dbSNP
rs1291082070 892 dbSNP
rs923870986 894 dbSNP
rs1363381330 897 dbSNP
rs1188517233 902 dbSNP
rs775143428 907 dbSNP
rs879881227 912 dbSNP
rs111544740 914 dbSNP
rs1241066757 918 dbSNP
rs967922166 920 dbSNP
rs1260069458 921 dbSNP
rs1041459826 924 dbSNP
rs947165310 927 dbSNP
rs1259620425 928 dbSNP
rs372602018 931 dbSNP
rs759319525 934 dbSNP
rs937191137 935 dbSNP
rs879745200 936 dbSNP
rs1202790971 943 dbSNP
rs572904081 950 dbSNP
rs1018658186 953 dbSNP
rs1363600758 961 dbSNP
rs1009498600 968 dbSNP
rs981324371 973 dbSNP
rs951378233 974 dbSNP
rs1375470122 976 dbSNP
rs557689886 983 dbSNP
rs1433614413 991 dbSNP
rs1026472742 992 dbSNP
rs1349330910 996 dbSNP
rs1284382522 1001 dbSNP
rs1247745783 1005 dbSNP
rs1385406432 1009 dbSNP
rs995126303 1011 dbSNP
rs899406638 1026 dbSNP
rs1280980372 1028 dbSNP
rs1348651219 1029 dbSNP
rs1210346827 1032 dbSNP
rs1026097748 1034 dbSNP
rs1254183763 1038 dbSNP
rs1481708946 1043 dbSNP
rs539760829 1046 dbSNP
rs1178003598 1047 dbSNP
rs974181303 1048 dbSNP
rs1385602767 1054 dbSNP
rs1313488486 1060 dbSNP
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rs1396251636 1064 dbSNP
rs1012880088 1071 dbSNP
rs866937100 1081 dbSNP
rs1173413990 1083 dbSNP
rs963142603 1092 dbSNP
rs1018440098 1093 dbSNP
rs771899514 1101 dbSNP
rs192749724 1102 dbSNP
rs745860117 1109 dbSNP
rs1442889930 1111 dbSNP
rs1304068530 1112 dbSNP
rs1370235741 1126 dbSNP
rs112856872 1127 dbSNP
rs1206639948 1138 dbSNP
rs1000222044 1142 dbSNP
rs10943652 1144 dbSNP
rs1205429837 1145 dbSNP
rs1395848851 1149 dbSNP
rs568628804 1158 dbSNP
rs915127434 1159 dbSNP
rs946671829 1159 dbSNP
rs1454174108 1165 dbSNP
rs1189985753 1167 dbSNP
rs1420974207 1175 dbSNP
rs558110722 1187 dbSNP
rs536389397 1202 dbSNP
rs1169278500 1204 dbSNP
rs1421067294 1210 dbSNP
rs1462810248 1212 dbSNP
rs947145241 1215 dbSNP
rs892861653 1216 dbSNP
rs1438576105 1223 dbSNP
rs1449860099 1223 dbSNP
rs1243705695 1226 dbSNP
rs1190971016 1231 dbSNP
rs1055489198 1238 dbSNP
rs937134066 1249 dbSNP
rs545912977 1251 dbSNP
rs1235382774 1252 dbSNP
rs1274125215 1264 dbSNP
rs987268281 1268 dbSNP
rs1219942047 1270 dbSNP
rs1290027945 1282 dbSNP
rs371621160 1286 dbSNP
rs1485889038 1288 dbSNP
rs1185493167 1289 dbSNP
rs1420860761 1296 dbSNP
rs533833607 1306 dbSNP
rs1475947183 1316 dbSNP
rs1165236053 1318 dbSNP
rs1356914032 1320 dbSNP
rs1290028618 1326 dbSNP
rs74895223 1348 dbSNP
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rs141157663 1362 dbSNP
rs962717235 1365 dbSNP
rs111448726 1369 dbSNP
rs1297592406 1373 dbSNP
rs994970579 1375 dbSNP
rs1018333020 1392 dbSNP
rs532935694 1401 dbSNP
rs926410696 1405 dbSNP
rs955518433 1406 dbSNP
rs1029877010 1417 dbSNP
rs1227000761 1421 dbSNP
rs999766081 1426 dbSNP
rs902794676 1430 dbSNP
rs1023193290 1432 dbSNP
rs1317990470 1432 dbSNP
rs1022561644 1438 dbSNP
rs74646225 1444 dbSNP
rs895844037 1451 dbSNP
rs187016045 1455 dbSNP
rs529124521 1467 dbSNP
rs1057436717 1473 dbSNP
rs561872768 1478 dbSNP
rs1178787706 1480 dbSNP
rs1055434644 1484 dbSNP
rs1408457836 1487 dbSNP
rs1399970156 1488 dbSNP
rs1156807778 1498 dbSNP
rs77688905 1501 dbSNP
rs1163173996 1503 dbSNP
rs1436711133 1512 dbSNP
rs1313675946 1513 dbSNP
rs1340163160 1514 dbSNP
rs1042212899 1533 dbSNP
rs907040976 1534 dbSNP
rs1421417171 1538 dbSNP
rs572967240 1542 dbSNP
rs1374550718 1543 dbSNP
rs1240000241 1544 dbSNP
rs1284568477 1545 dbSNP
rs748015079 1551 dbSNP
rs571834877 1568 dbSNP
rs564161650 1571 dbSNP
rs1279146612 1578 dbSNP
rs1440282765 1581 dbSNP
rs79254644 1602 dbSNP
rs1246776653 1605 dbSNP
rs1201032216 1614 dbSNP
rs138623581 1618 dbSNP
rs1176674386 1621 dbSNP
rs557407103 1622 dbSNP
rs1455636345 1625 dbSNP
rs911259891 1627 dbSNP
rs987126360 1629 dbSNP
rs985540803 1636 dbSNP
rs955466386 1638 dbSNP
rs1412947938 1656 dbSNP
rs929047262 1657 dbSNP
rs1446564989 1674 dbSNP
rs922783816 1680 dbSNP
rs1307702704 1692 dbSNP
rs1308401657 1694 dbSNP
rs1373904831 1698 dbSNP
rs978638105 1699 dbSNP
rs1275615186 1704 dbSNP
rs765387068 1708 dbSNP
rs966924754 1711 dbSNP
rs973586487 1716 dbSNP
rs1342297152 1723 dbSNP
rs755041705 1730 dbSNP
rs1023539648 1731 dbSNP
rs1436981649 1732 dbSNP
rs1196594037 1737 dbSNP
rs1213297411 1754 dbSNP
rs1254797615 1754 dbSNP
rs1011119193 1755 dbSNP
rs868118635 1782 dbSNP
rs1192968783 1784 dbSNP
rs1377093550 1785 dbSNP
rs71551541 1788 dbSNP
rs1284495122 1796 dbSNP
rs1165110287 1802 dbSNP
rs536140874 1834 dbSNP
rs1343752196 1837 dbSNP
rs1420578202 1839 dbSNP
rs1465421771 1839 dbSNP
rs1302726625 1842 dbSNP
rs1443265946 1846 dbSNP
rs1397145486 1851 dbSNP
rs1442228978 1857 dbSNP
rs1323504335 1861 dbSNP
rs1356030646 1864 dbSNP
rs1326684095 1867 dbSNP
rs1409289574 1868 dbSNP
rs1429841324 1869 dbSNP
rs1270402491 1870 dbSNP
rs979392206 1871 dbSNP
rs1479148542 1872 dbSNP
rs1428019503 1873 dbSNP
rs74406329 1888 dbSNP
rs1209146904 1889 dbSNP
rs1242791311 1889 dbSNP
rs1335264553 1889 dbSNP
rs76865677 1889 dbSNP
rs769306526 1889 dbSNP
rs1477579399 1891 dbSNP
rs1035730231 1892 dbSNP
rs1034014931 1894 dbSNP
rs1234961303 1895 dbSNP
rs1001220868 1898 dbSNP
rs370433619 1900 dbSNP
rs946588668 1901 dbSNP
rs574945444 1910 dbSNP
rs759760504 1920 dbSNP
rs906988787 1926 dbSNP
rs374288689 1927 dbSNP
rs1318337547 1928 dbSNP
rs1437611081 1934 dbSNP
rs1010708384 1950 dbSNP
rs1397699036 1951 dbSNP
rs1294803416 1958 dbSNP
rs9443684 1971 dbSNP
rs1039261839 1982 dbSNP
rs1263596557 1992 dbSNP
rs1352682487 1994 dbSNP
rs1205651061 2003 dbSNP
rs943340281 2005 dbSNP
rs896995102 2010 dbSNP
rs1488015627 2012 dbSNP
rs751833613 2019 dbSNP
rs1259922334 2021 dbSNP
rs796719871 2023 dbSNP
rs1187350874 2028 dbSNP
rs1367098377 2029 dbSNP
rs1224536761 2030 dbSNP
rs367898201 2030 dbSNP
rs941298418 2043 dbSNP
rs1159680526 2044 dbSNP
rs1359329681 2044 dbSNP
rs1375873084 2044 dbSNP
rs1711932 2046 dbSNP
rs1355761669 2049 dbSNP
rs1395108141 2055 dbSNP
rs1049787378 2060 dbSNP
rs933994580 2063 dbSNP
rs1406586025 2070 dbSNP
rs1239617042 2075 dbSNP
rs1308509738 2079 dbSNP
rs758497230 2085 dbSNP
rs1338571399 2086 dbSNP
rs978207188 2090 dbSNP
rs967244114 2097 dbSNP
rs928932528 2105 dbSNP
rs1214624152 2106 dbSNP
rs1282718441 2115 dbSNP
rs1483667076 2116 dbSNP
rs1200093643 2119 dbSNP
rs750811106 2122 dbSNP
rs867875089 2125 dbSNP
rs989687420 2146 dbSNP
rs1179783594 2149 dbSNP
rs959638198 2152 dbSNP
rs551487258 2166 dbSNP
rs941755011 2171 dbSNP
rs1375528638 2179 dbSNP
rs1001127602 2182 dbSNP
rs562377556 2183 dbSNP
rs992060676 2187 dbSNP
rs1398335227 2188 dbSNP
rs1308439898 2190 dbSNP
rs1024435703 2191 dbSNP
rs184188703 2192 dbSNP
rs1159285558 2201 dbSNP
rs1312877492 2203 dbSNP
rs568832605 2213 dbSNP
rs550602513 2217 dbSNP
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rs192153199 2221 dbSNP
rs967322931 2224 dbSNP
rs1196090922 2225 dbSNP
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rs1173480285 2233 dbSNP
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rs1465931157 2246 dbSNP
rs754381846 2250 dbSNP
rs1176294594 2265 dbSNP
rs1049693679 2266 dbSNP
rs1244180109 2267 dbSNP
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rs1397850419 2270 dbSNP
rs1021569021 2280 dbSNP
rs1326557367 2289 dbSNP
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rs150586429 2296 dbSNP
rs370964290 2296 dbSNP
rs1711933 2300 dbSNP
rs901184720 2304 dbSNP
rs147174617 2316 dbSNP
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rs1316472438 2321 dbSNP
rs899914125 2328 dbSNP
rs1017444376 2332 dbSNP
rs1487870401 2337 dbSNP
rs1189008007 2338 dbSNP
rs1007765069 2343 dbSNP
rs915375221 2345 dbSNP
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rs989635099 2356 dbSNP
rs535600443 2366 dbSNP
rs1462858455 2370 dbSNP
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rs1383234152 2390 dbSNP
rs993399533 2392 dbSNP
rs897517239 2393 dbSNP
rs553025923 2396 dbSNP
rs1037367855 2401 dbSNP
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rs1364211203 2409 dbSNP
rs982332514 2409 dbSNP
rs3002704 2411 dbSNP
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rs2347257 2514 dbSNP
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rs542176144 2570 dbSNP
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rs1436659023 2610 dbSNP
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rs28710854 2644 dbSNP
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rs1453391640 2651 dbSNP
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rs1477142240 2659 dbSNP
rs1196146385 2666 dbSNP
rs1030149536 2670 dbSNP
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rs115582299 2685 dbSNP
rs1322227374 2687 dbSNP
rs1328875366 2693 dbSNP
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rs1368278533 2707 dbSNP
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rs1006262825 2714 dbSNP
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rs539474001 2863 dbSNP
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rs987313454 2994 dbSNP
rs1170604913 2995 dbSNP
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rs758647745 3211 dbSNP
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rs1277921808 3264 dbSNP
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rs1375102590 3402 dbSNP
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rs1334001713 3458 dbSNP
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rs71570637 3463 dbSNP
rs755698259 3475 dbSNP
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rs1277283945 3483 dbSNP
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rs5876850 3486 dbSNP
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rs969361882 3491 dbSNP
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rs1321214566 3503 dbSNP
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rs897988579 3540 dbSNP
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rs552894210 3565 dbSNP
rs1006468305 3569 dbSNP
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rs765742685 3585 dbSNP
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rs1278620202 3597 dbSNP
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rs570329674 3625 dbSNP
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rs1222583770 3627 dbSNP
rs530599328 3634 dbSNP
rs570166650 3636 dbSNP
rs941407926 3642 dbSNP
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rs1166715388 3652 dbSNP
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rs909081002 3669 dbSNP
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rs1320102 3673 dbSNP
rs1325662820 3674 dbSNP
rs765132674 3676 dbSNP
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rs530158638 3691 dbSNP
rs1358545496 3694 dbSNP
rs75872143 3695 dbSNP
rs980662200 3697 dbSNP
rs1291139403 3699 dbSNP
rs1489910382 3703 dbSNP
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rs1446830678 3713 dbSNP
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rs1340922771 3781 dbSNP
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rs1362080230 3797 dbSNP
rs1203696665 3800 dbSNP
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rs369287286 3813 dbSNP
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rs776358043 3822 dbSNP
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rs1051320171 3853 dbSNP
rs1237194421 3855 dbSNP
rs35794185 3864 dbSNP
rs1320449705 3866 dbSNP
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rs1360072711 3869 dbSNP
rs1261885272 3870 dbSNP
rs1177212646 3875 dbSNP
rs1249247545 3875 dbSNP
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rs1037033963 3877 dbSNP
rs546175434 3880 dbSNP
rs1480028185 3882 dbSNP
rs1174160852 3888 dbSNP
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rs2253430 3896 dbSNP
rs377439006 3897 dbSNP
rs1029216179 3908 dbSNP
rs1475737077 3917 dbSNP
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rs927104218 3920 dbSNP
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rs1006375204 3923 dbSNP
rs912934079 3924 dbSNP
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rs888055071 3931 dbSNP
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rs2253428 3934 dbSNP
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rs1288219473 3979 dbSNP
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rs1228249227 3993 dbSNP
rs1366355702 4005 dbSNP
rs1272771706 4014 dbSNP
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rs1340757552 4025 dbSNP
rs1272446972 4032 dbSNP
rs1007484137 4036 dbSNP
rs1216805694 4040 dbSNP
rs954267627 4044 dbSNP
rs943731048 4051 dbSNP
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rs1052136923 4065 dbSNP
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rs897406137 4091 dbSNP
rs1037045537 4103 dbSNP
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rs150058409 4107 dbSNP
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rs1165505495 4112 dbSNP
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rs925150931 4138 dbSNP
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rs1288674579 4169 dbSNP
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rs962089580 4186 dbSNP
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rs141240690 4200 dbSNP
rs146542404 4217 dbSNP
rs907914136 4221 dbSNP
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rs938074212 4227 dbSNP
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rs1343822773 4281 dbSNP
rs1471228702 4283 dbSNP
rs1338003625 4286 dbSNP
rs952183329 4288 dbSNP
rs1280798886 4291 dbSNP
rs913111124 4295 dbSNP
rs1222874796 4297 dbSNP
rs1281860544 4299 dbSNP
rs1313780286 4300 dbSNP
rs534626907 4309 dbSNP
rs1262499883 4313 dbSNP
rs144337386 4325 dbSNP
rs1201785746 4330 dbSNP
rs925598092 4337 dbSNP
rs1470605079 4340 dbSNP
rs1176885957 4341 dbSNP
rs966667447 4342 dbSNP
rs985251571 4351 dbSNP
rs1177766996 4355 dbSNP
rs953926974 4357 dbSNP
rs1019211031 4364 dbSNP
rs1330256404 4365 dbSNP
rs556304722 4366 dbSNP
rs1277481764 4370 dbSNP
rs892137843 4371 dbSNP
rs1029872370 4378 dbSNP
rs1052125655 4379 dbSNP
rs1317336540 4382 dbSNP
rs1200473949 4384 dbSNP
rs1000608037 4390 dbSNP
rs1284072572 4394 dbSNP
rs1438501856 4400 dbSNP
rs903676399 4403 dbSNP
rs1231450750 4422 dbSNP
rs558558149 4424 dbSNP
rs1365678280 4427 dbSNP
rs1015833143 4429 dbSNP
rs1479730842 4430 dbSNP
rs1170190965 4436 dbSNP
rs947928016 4438 dbSNP
rs1408924471 4443 dbSNP
rs1326299471 4445 dbSNP
rs1366982761 4446 dbSNP
rs1442604720 4447 dbSNP
rs1405216476 4466 dbSNP
rs537291646 4469 dbSNP
rs1329186230 4473 dbSNP
rs1034091635 4479 dbSNP
rs757514525 4483 dbSNP
rs866093046 4484 dbSNP
rs1340138110 4491 dbSNP
rs1213999120 4492 dbSNP
rs1272576955 4496 dbSNP
rs940655084 4499 dbSNP
rs1178049176 4505 dbSNP
rs1268585298 4514 dbSNP
rs1412263382 4517 dbSNP
rs1002324592 4518 dbSNP
rs569749761 4530 dbSNP
rs906592394 4533 dbSNP
rs1165607675 4538 dbSNP
rs749692489 4540 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gaagACCGAGGUUCAGGUCa 5'
              | ||| ::|| |||| 
Target 5' aggaUUGCU-UGAGGCCAGg 3'
 		21 - 39
2 
miRNA  3' gaAGACCGAGGUUCAGGUca 5'
            |:|||    :|| |||  
Target 5' -cUUUGG----GAGGCCAag 3'
 		1 - 15
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000370658.5 | 3UTR | CUUUGGGAGGCCAAGGCAGGAGGAUUGCUUGAGGCCAGGAGUUUGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
27 hsa-miR-378f Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT463100 ZNF609 zinc finger protein 609 2 2
MIRT469371 REST RE1 silencing transcription factor 2 6
MIRT495441 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT513606 VPS37B VPS37B, ESCRT-I subunit 2 2
MIRT520414 TXNL1 thioredoxin like 1 2 4
MIRT525111 PRKD2 protein kinase D2 2 2
MIRT525979 SPA17 sperm autoantigenic protein 17 2 2
MIRT527002 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT529215 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT529835 ARGFX arginine-fifty homeobox 2 2
MIRT532300 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT537577 ESYT2 extended synaptotagmin 2 2 2
MIRT543140 AKT1 AKT serine/threonine kinase 1 2 2
MIRT554924 RAP1B RAP1B, member of RAS oncogene family 2 2
MIRT564970 WTAP WT1 associated protein 2 2
MIRT570115 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT652734 TGFB2 transforming growth factor beta 2 2 2
MIRT655948 NDST1 N-deacetylase and N-sulfotransferase 1 2 2
MIRT655997 MYRF myelin regulatory factor 2 2
MIRT684875 P4HB prolyl 4-hydroxylase subunit beta 2 2
MIRT692969 LGSN lengsin, lens protein with glutamine synthetase domain 2 2
MIRT693737 ACACA acetyl-CoA carboxylase alpha 2 2
MIRT710991 PPARGC1B PPARG coactivator 1 beta 2 2
MIRT712247 RCC2 regulator of chromosome condensation 2 2 2
MIRT718602 DCTPP1 dCTP pyrophosphatase 1 2 2
MIRT723499 WDR33 WD repeat domain 33 2 2
MIRT725448 HIPK3 homeodomain interacting protein kinase 3 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-378f Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-miR-378f Fluorouracil 3385 NSC19893 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-miR-378f Doxorubicin 31703 NSC123127 approved sensitive High Triple-Negative Breast Cancer cell line (MDA-MB-231, MDA-MB-468)
hsa-miR-378f Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (SW480, HCT-116)
hsa-miR-378f Erlotinib 176870 NSC718781 approved resistant High Head And Neck Squamous Cell Carcinoma cell line (HN6)
hsa-mir-378f Androstenedione+Anastrozole sensitive cell line (MCF-7)
hsa-miR-378f Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-378f Doxorubicin 31703 NSC123127 approved sensitive cell line (BAS)
hsa-miR-378f Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-378f Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-378f Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)
hsa-miR-378f Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR3)

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