pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF708   
Synonyms KOX8, ZNF15, ZNF15L1
Description zinc finger protein 708
Transcript NM_021269   
Expression
Putative miRNA Targets on ZNF708
3'UTR of ZNF708
(miRNA target sites are highlighted)
>ZNF708|NM_021269|3'UTR
   1 TGTGTCAAATCCTTTAGTGTATTTTCAACTTTTATTAAAACACAAGATAATTCATACTGGAGAGAAATCCTACAAATGTG
  81 ATAAATGTGGCAAAGCCTTTAACTGGCTCTTAATCCTTATGAAACAAAAGATAATTCATACTAGAGAGAAACCCTACAAA
 161 TGTAAAGAATGTGGCAAAGCATTTAACTGGTCCCTAAATCTTACTAAACATAAAAAAACTTAAACTGGAGAGAAACTACA
 241 AAGCTGGAAGACATCACAGTAATTCTGACAACACCTCAAACTTTTCTAAACATAAAATAAATCATACTGGTGAGGAACTT
 321 TAAAAATGCGAAAAATGTGACAAAATCTTTAAATGATTGTCACACTTGATTGTAGGTAAGATAATTCTTACTAGAAAAAC
 401 TCTTACAAGTGTGAAGAATGTGGCAAAATTTTTAATGAATACTCACACCTTATTGCCAGGAAAGCATTTATACTTGAGAA
 481 AAATTGTACCAATATAAAGACTGTGAAAAAGCCATTAATGTCTGCTCACATCTTACTCAACATCAGAGAGTACTTAAAAA
 561 AAGTATTATAAATTTAATTACTGTCAAAAAGTATTTCAGAAAATATAAGCTTTTAAAGTATTTATTTTGAAGACAAACAT
 641 TACAAATAAAAGAGGATTGTAATACCTTTATTTGTATCACAGATCTTATTGTACACATTTTGTACTAGAGAAAACCCTGA
 721 AGCAGTTACTTAAACTTTGTTCAACATCAGGGAATTCAGATTGGAGAAAAACCCTGCAAATGTAATAAATTTGAAAAAAA
 801 AGTTTTCCAAAACTACAACTTAGACAACACCAGAGGGTTCATACTGAGATATATTTTTGCAGATGCAGTATATATTTAAA
 881 ACATTTAATCCAAAATAAGTCTATGTAAATATCAGAGAATTCACAGTGGAAATATCTAAGGTAGGGCCGGGCATGGTGGC
 961 TCACGCCTGTAATGCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCATGAGGTCAACAGATTGAGACCATCCTGGTCAAC
1041 ATGGTAAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGCGGCACGTGCCTGTAGTCTCAGCTACTTGGG
1121 ACGCTGAGGCAGGAAAATCCGTTGAACCCAGGAGGCAGAGGTTGTAGTGAGCCGAGATTGCACCACTGCACTCCAGCCGG
1201 GTGACAGAGTGAGACTCCATCTCAAAAACAAACAAACTAAGGTATGGATGCTTCAGACATTACACTATATCAAAGTGCTG
1281 ACTGTTAAAAATGATCCCAAACTAACGGTAGATAAATTTATTTGTACATAACTTTAAAAGGAGTAGAAGATTTTTTGGAA
1361 GTTTGTAATTACATTCAAAGTATACTTTTTTTGTTTGTTTGTTTTCCTTGAGACAGAGTCTCTCTCTGTCGTCCAGGCTG
1441 GAGTGCAGTGGCACAATCTCAGCTCGCTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTACTGAGT
1521 AGCTGAGATTACAGGTGCACACCACCACGTCCGGCTGACTTTTGTATTTTTAGTAGGGACGGGGTTTCACCATATTGGTC
1601 AGGGTAGTCTTGAACTCCTGACCTCATGCTCTGCCCAGCTTGGCTTCCCAAAGTGCTGTGATTACAGGCTTAAGCCACAG
1681 CGCCCGGCCCAAAGTGTTCTTTTTTCCTTGAAAAGAAGTACAGATTTTTTAAAAAGCTAATATTGCTGTGATTCAACTCT
1761 CTAGTTACTTGATGCTATTTCTTCATTTCTATTGTATTCACATGTGAAAGCATGTGATCAGTTGTCACGGCATCAAAGAT
1841 AGGAGAGTTTCTTTTTTTTTAGGTGGGCATTATTTATGACCTTTTCTTTGGAAGAGTAAGGACATTAAAATGTAACATGC
1921 ATGATGAAAATCTAAGTGGAGATGGTATTTGTGGTTAATTATGATATTGAGTGGTGCATGAGGTAGGTGTTTAGAGTAAT
2001 ATTCTTTTGCATTATAGTAAGAACATTTAAGTTTTGTTAAAATTAAAAAATTAGTACGTTATTTTACTATTTGTACTTTT
2081 ATGTAATAAAATGCAGTACATTTTTAAATTTTC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugacGUCGGAACUGGAGGGUc 5'
              ||| ||||:|:||||| 
Target 5' tgccCAG-CTTGGCTTCCCAa 3'
1632 - 1651 152.00 -20.80
2
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            |||| |||  :|||||:: 
Target 5' gcTGCAACCTCTGCCTCCTGg 3'
1466 - 1486 135.00 -25.50
3
miRNA  3' ugaCGUCGGAACUGGAGGGUc 5'
             |:||:||||| ||||:: 
Target 5' aggGTAGTCTTGAACTCCTGa 3'
1601 - 1621 118.00 -21.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN29461212 5 COSMIC
COSN31497833 13 COSMIC
COSN30498756 24 COSMIC
COSN30458245 69 COSMIC
COSN31581739 72 COSMIC
COSN30128956 75 COSMIC
COSN27006439 82 COSMIC
COSN27006438 83 COSMIC
COSN8257298 94 COSMIC
COSN30541835 115 COSMIC
COSN30527585 129 COSMIC
COSN8605327 130 COSMIC
COSN27006437 143 COSMIC
COSN31505441 155 COSMIC
COSN30114962 211 COSMIC
COSN30474632 212 COSMIC
COSN31521328 235 COSMIC
COSN28690895 282 COSMIC
COSN31996565 532 COSMIC
COSN1762779 581 COSMIC
COSN8552270 771 COSMIC
COSN27137712 964 COSMIC
COSN28357564 974 COSMIC
COSN24902808 1036 COSMIC
COSN7118169 1141 COSMIC
COSN16718294 1493 COSMIC
COSN16447642 1693 COSMIC
COSN15150858 1723 COSMIC
COSN29679511 1852 COSMIC
COSN20115630 2051 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1459107255 2 dbSNP
rs1296302462 5 dbSNP
rs1399288210 8 dbSNP
rs759200177 9 dbSNP
rs1304715616 10 dbSNP
rs1456126823 12 dbSNP
rs1019424636 19 dbSNP
rs181100343 26 dbSNP
rs374803496 28 dbSNP
rs746471956 31 dbSNP
rs778394299 32 dbSNP
rs1193642888 36 dbSNP
rs371204394 37 dbSNP
rs368086999 39 dbSNP
rs779133798 41 dbSNP
rs553780567 44 dbSNP
rs1348477869 46 dbSNP
rs780385540 47 dbSNP
rs533868517 50 dbSNP
rs994762612 60 dbSNP
rs79205479 62 dbSNP
rs189532403 72 dbSNP
rs1323355866 73 dbSNP
rs1248364176 77 dbSNP
rs1289881717 82 dbSNP
rs769317696 91 dbSNP
rs948790275 93 dbSNP
rs1205993843 103 dbSNP
rs1225190097 106 dbSNP
rs917436135 120 dbSNP
rs925263935 123 dbSNP
rs551582864 128 dbSNP
rs1228846162 132 dbSNP
rs143269680 134 dbSNP
rs775646551 135 dbSNP
rs1169915517 141 dbSNP
rs1352324522 142 dbSNP
rs772643384 143 dbSNP
rs1345762647 146 dbSNP
rs1380998078 151 dbSNP
rs1450211303 154 dbSNP
rs1230951926 155 dbSNP
rs924845768 162 dbSNP
rs375087864 164 dbSNP
rs978429446 171 dbSNP
rs975775364 172 dbSNP
rs947006852 174 dbSNP
rs1389695095 181 dbSNP
rs1204353256 183 dbSNP
rs1168247447 210 dbSNP
rs549016806 213 dbSNP
rs1182103068 219 dbSNP
rs1421373880 219 dbSNP
rs184160345 223 dbSNP
rs139345174 226 dbSNP
rs1269883728 228 dbSNP
rs975182593 248 dbSNP
rs986300494 254 dbSNP
rs781176955 260 dbSNP
rs115298258 271 dbSNP
rs1176642591 291 dbSNP
rs1360858034 295 dbSNP
rs1450053334 302 dbSNP
rs1335813298 303 dbSNP
rs1389178385 304 dbSNP
rs114881279 305 dbSNP
rs994160575 308 dbSNP
rs897803832 318 dbSNP
rs1302122498 321 dbSNP
rs192657519 324 dbSNP
rs1342169393 328 dbSNP
rs544370999 329 dbSNP
rs575762098 330 dbSNP
rs1465635653 336 dbSNP
rs1014336171 339 dbSNP
rs1240026705 340 dbSNP
rs1026874454 341 dbSNP
rs1474772764 342 dbSNP
rs894588297 346 dbSNP
rs1430852266 352 dbSNP
rs994819557 353 dbSNP
rs1433894836 354 dbSNP
rs2997224 362 dbSNP
rs1022910547 366 dbSNP
rs1412346189 368 dbSNP
rs542159870 371 dbSNP
rs1320476523 372 dbSNP
rs1343682165 388 dbSNP
rs895897175 391 dbSNP
rs1430342529 399 dbSNP
rs1294181880 400 dbSNP
rs1392914266 419 dbSNP
rs1222150749 422 dbSNP
rs868092865 429 dbSNP
rs779651113 436 dbSNP
rs903687451 436 dbSNP
rs575933247 449 dbSNP
rs1330522639 452 dbSNP
rs1225866445 455 dbSNP
rs1043626386 458 dbSNP
rs771042227 460 dbSNP
rs945298540 474 dbSNP
rs913553905 475 dbSNP
rs1430123181 476 dbSNP
rs749350613 483 dbSNP
rs903446032 488 dbSNP
rs1174368298 503 dbSNP
rs1252475927 506 dbSNP
rs1471014560 514 dbSNP
rs944454824 517 dbSNP
rs910333934 519 dbSNP
rs368133511 527 dbSNP
rs952210105 536 dbSNP
rs1028258630 547 dbSNP
rs972314934 550 dbSNP
rs1303035026 552 dbSNP
rs1288949590 555 dbSNP
rs1351610161 556 dbSNP
rs962638167 558 dbSNP
rs1278131370 563 dbSNP
rs1350493687 563 dbSNP
rs947599854 563 dbSNP
rs1024294392 567 dbSNP
rs1293505546 567 dbSNP
rs1377283447 571 dbSNP
rs920959528 574 dbSNP
rs1014304913 589 dbSNP
rs1182996949 591 dbSNP
rs894556890 595 dbSNP
rs1439481974 604 dbSNP
rs1179661449 606 dbSNP
rs1459327664 610 dbSNP
rs975074068 616 dbSNP
rs1184390404 618 dbSNP
rs1387350113 645 dbSNP
rs1423020914 649 dbSNP
rs1162986701 653 dbSNP
rs598959 656 dbSNP
rs1327440519 657 dbSNP
rs1335482609 659 dbSNP
rs537034763 674 dbSNP
rs912280226 683 dbSNP
rs553475653 689 dbSNP
rs775410342 698 dbSNP
rs1380078372 707 dbSNP
rs983035445 716 dbSNP
rs1274727825 737 dbSNP
rs1043980732 739 dbSNP
rs1193947967 739 dbSNP
rs951224911 743 dbSNP
rs1442748667 747 dbSNP
rs892420146 749 dbSNP
rs1040007550 761 dbSNP
rs1442994089 766 dbSNP
rs1781871 778 dbSNP
rs7246339 779 dbSNP
rs1279702508 786 dbSNP
rs557905957 788 dbSNP
rs1374318241 790 dbSNP
rs1330391283 794 dbSNP
rs1166609963 796 dbSNP
rs969270410 801 dbSNP
rs1050160855 802 dbSNP
rs930404647 802 dbSNP
rs780794548 806 dbSNP
rs1408193383 810 dbSNP
rs1295871636 816 dbSNP
rs1336322934 819 dbSNP
rs1224651146 829 dbSNP
rs754989868 831 dbSNP
rs1269120980 833 dbSNP
rs920761430 835 dbSNP
rs537998160 836 dbSNP
rs1261015299 837 dbSNP
rs1460707881 838 dbSNP
rs1203205677 840 dbSNP
rs1262718604 850 dbSNP
rs1412770648 853 dbSNP
rs1191070152 863 dbSNP
rs972666451 866 dbSNP
rs1022959664 872 dbSNP
rs1159318480 872 dbSNP
rs1441961339 873 dbSNP
rs1378894808 876 dbSNP
rs1481049296 880 dbSNP
rs751585867 886 dbSNP
rs568960802 888 dbSNP
rs1427571225 890 dbSNP
rs895893851 898 dbSNP
rs1289046362 899 dbSNP
rs917540292 900 dbSNP
rs1380221366 901 dbSNP
rs1317007238 903 dbSNP
rs1345666165 926 dbSNP
rs1225194272 932 dbSNP
rs1281311598 933 dbSNP
rs189427913 935 dbSNP
rs1228806762 936 dbSNP
rs184676776 943 dbSNP
rs1353081919 946 dbSNP
rs958656730 948 dbSNP
rs999448198 949 dbSNP
rs1490538978 952 dbSNP
rs1202168527 955 dbSNP
rs1267424437 956 dbSNP
rs566791876 964 dbSNP
rs192140993 965 dbSNP
rs1365973234 968 dbSNP
rs533176028 981 dbSNP
rs1451174453 983 dbSNP
rs1157637122 987 dbSNP
rs1365596424 990 dbSNP
rs903374968 1005 dbSNP
rs1406266970 1016 dbSNP
rs1301169127 1027 dbSNP
rs1043233735 1028 dbSNP
rs187221407 1029 dbSNP
rs1308337935 1040 dbSNP
rs878915331 1046 dbSNP
rs796083763 1052 dbSNP
rs550667355 1053 dbSNP
rs1040226608 1054 dbSNP
rs1285611068 1061 dbSNP
rs865843302 1067 dbSNP
rs1314990863 1068 dbSNP
rs1360211936 1068 dbSNP
rs1224778962 1069 dbSNP
rs1396899380 1076 dbSNP
rs1445943729 1076 dbSNP
rs1339908537 1085 dbSNP
rs900047776 1086 dbSNP
rs1253014690 1088 dbSNP
rs1417717555 1090 dbSNP
rs531084796 1091 dbSNP
rs566087555 1093 dbSNP
rs1358839893 1095 dbSNP
rs562136934 1096 dbSNP
rs1426202353 1097 dbSNP
rs1008790264 1107 dbSNP
rs1158488178 1109 dbSNP
rs888756510 1111 dbSNP
rs1364471283 1114 dbSNP
rs766395338 1122 dbSNP
rs1050545382 1123 dbSNP
rs1370848859 1124 dbSNP
rs1390640407 1127 dbSNP
rs943690137 1128 dbSNP
rs542447610 1130 dbSNP
rs1383771687 1140 dbSNP
rs1248519031 1141 dbSNP
rs28688205 1141 dbSNP
rs1046837128 1142 dbSNP
rs1036526141 1148 dbSNP
rs929704843 1155 dbSNP
rs1479839374 1156 dbSNP
rs749943898 1160 dbSNP
rs373113613 1163 dbSNP
rs919795426 1173 dbSNP
rs866785976 1174 dbSNP
rs2992091 1178 dbSNP
rs1446067499 1180 dbSNP
rs1195198784 1190 dbSNP
rs917425836 1193 dbSNP
rs1384019698 1195 dbSNP
rs764943955 1197 dbSNP
rs1428621576 1198 dbSNP
rs1284783191 1199 dbSNP
rs1352663647 1202 dbSNP
rs916462303 1204 dbSNP
rs1337135232 1215 dbSNP
rs991909987 1225 dbSNP
rs1408113735 1229 dbSNP
rs1454722378 1233 dbSNP
rs958972062 1238 dbSNP
rs761310989 1239 dbSNP
rs1215269630 1241 dbSNP
rs1297862166 1241 dbSNP
rs775942523 1241 dbSNP
rs750000083 1246 dbSNP
rs927259783 1252 dbSNP
rs145809204 1255 dbSNP
rs998976586 1265 dbSNP
rs967446361 1267 dbSNP
rs1486014027 1269 dbSNP
rs764854684 1271 dbSNP
rs1021805935 1272 dbSNP
rs968821997 1273 dbSNP
rs1278976427 1275 dbSNP
rs1401914489 1280 dbSNP
rs1427848734 1295 dbSNP
rs1011718913 1306 dbSNP
rs1455701409 1307 dbSNP
rs1010320627 1316 dbSNP
rs900098681 1318 dbSNP
rs1334918517 1328 dbSNP
rs577724511 1349 dbSNP
rs1431806931 1351 dbSNP
rs141944629 1360 dbSNP
rs1360036617 1361 dbSNP
rs767736969 1365 dbSNP
rs890828156 1372 dbSNP
rs1326052194 1373 dbSNP
rs1222032342 1376 dbSNP
rs1278421310 1377 dbSNP
rs1405357022 1384 dbSNP
rs1420844432 1389 dbSNP
rs1047164004 1392 dbSNP
rs1487685311 1393 dbSNP
rs1476523852 1395 dbSNP
rs1262053949 1403 dbSNP
rs1199648424 1405 dbSNP
rs1270997230 1407 dbSNP
rs1008757800 1412 dbSNP
rs929782996 1424 dbSNP
rs543970079 1426 dbSNP
rs1161558508 1428 dbSNP
rs144961826 1431 dbSNP
rs555254264 1432 dbSNP
rs898840520 1445 dbSNP
rs1347916264 1450 dbSNP
rs756952528 1457 dbSNP
rs940440401 1460 dbSNP
rs535666875 1461 dbSNP
rs566625490 1465 dbSNP
rs947859255 1466 dbSNP
rs183369901 1478 dbSNP
rs1057342513 1482 dbSNP
rs371217744 1486 dbSNP
rs12984321 1488 dbSNP
rs1293374568 1496 dbSNP
rs1308070586 1499 dbSNP
rs1233175572 1505 dbSNP
rs937572952 1514 dbSNP
rs927568033 1529 dbSNP
rs979044007 1535 dbSNP
rs1220556934 1548 dbSNP
rs992112198 1552 dbSNP
rs539404141 1553 dbSNP
rs928685396 1557 dbSNP
rs1323498320 1561 dbSNP
rs1355431707 1564 dbSNP
rs774890894 1564 dbSNP
rs1220073562 1566 dbSNP
rs1375661206 1568 dbSNP
rs1369987595 1574 dbSNP
rs1292218551 1580 dbSNP
rs967464192 1581 dbSNP
rs570513048 1596 dbSNP
rs1021689982 1602 dbSNP
rs1355639522 1618 dbSNP
rs1011771002 1623 dbSNP
rs771418559 1625 dbSNP
rs964230307 1633 dbSNP
rs1273654756 1639 dbSNP
rs965465675 1658 dbSNP
rs550605952 1661 dbSNP
rs1333901817 1662 dbSNP
rs1202157085 1668 dbSNP
rs530898624 1676 dbSNP
rs1439315367 1677 dbSNP
rs1184450318 1678 dbSNP
rs1387109709 1681 dbSNP
rs1422348731 1682 dbSNP
rs1176490641 1685 dbSNP
rs891370977 1686 dbSNP
rs8112775 1687 dbSNP
rs1329706530 1696 dbSNP
rs1400105654 1706 dbSNP
rs1452827336 1707 dbSNP
rs1190410217 1713 dbSNP
rs1379877187 1720 dbSNP
rs993758446 1723 dbSNP
rs150315400 1724 dbSNP
rs1341372397 1730 dbSNP
rs1212805337 1739 dbSNP
rs111651784 1749 dbSNP
rs994768435 1756 dbSNP
rs1196631353 1757 dbSNP
rs489845 1762 dbSNP
rs1245238326 1764 dbSNP
rs895012176 1767 dbSNP
rs1186901043 1768 dbSNP
rs1056692340 1772 dbSNP
rs192594092 1773 dbSNP
rs939321449 1774 dbSNP
rs923820672 1782 dbSNP
rs1476670270 1789 dbSNP
rs1234050794 1790 dbSNP
rs1014619952 1801 dbSNP
rs532903506 1805 dbSNP
rs946006985 1806 dbSNP
rs564062365 1824 dbSNP
rs1318401347 1828 dbSNP
rs2928190 1828 dbSNP
rs1428487671 1829 dbSNP
rs11542488 1839 dbSNP
rs767976992 1842 dbSNP
rs964120057 1845 dbSNP
rs1323944602 1846 dbSNP
rs188210297 1859 dbSNP
rs1343117198 1861 dbSNP
rs1400189065 1861 dbSNP
rs1043675483 1864 dbSNP
rs987336368 1881 dbSNP
rs947673976 1891 dbSNP
rs1302985176 1892 dbSNP
rs1467068376 1901 dbSNP
rs488125 1903 dbSNP
rs988799095 1904 dbSNP
rs1202027383 1918 dbSNP
rs1465174466 1929 dbSNP
rs377351660 1942 dbSNP
rs487991 1945 dbSNP
rs151184464 1963 dbSNP
rs1417357966 1971 dbSNP
rs1297090002 1977 dbSNP
rs898188401 1992 dbSNP
rs1346042871 1996 dbSNP
rs1016541405 1997 dbSNP
rs1011985728 1998 dbSNP
rs1439082219 1999 dbSNP
rs1261551440 2006 dbSNP
rs894884268 2016 dbSNP
rs953295367 2017 dbSNP
rs1243608888 2025 dbSNP
rs1056302243 2034 dbSNP
rs1028844221 2035 dbSNP
rs1285474370 2046 dbSNP
rs1484249680 2046 dbSNP
rs973700840 2047 dbSNP
rs1202232573 2048 dbSNP
rs1254520310 2049 dbSNP
rs200190623 2051 dbSNP
rs142936365 2054 dbSNP
rs138452031 2056 dbSNP
rs1157512213 2057 dbSNP
rs3051927 2057 dbSNP
rs79406182 2057 dbSNP
rs552799540 2058 dbSNP
rs939153992 2059 dbSNP
rs1291727238 2062 dbSNP
rs1288669411 2070 dbSNP
rs902447828 2072 dbSNP
rs1042351406 2073 dbSNP
rs1391789892 2075 dbSNP
rs1308928293 2092 dbSNP
rs1379367495 2096 dbSNP
rs1035399025 2099 dbSNP
rs111928703 2105 dbSNP
rs1001300529 2107 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugacGUCGGAACUGGAGGGuc 5'
              | |||| ||||||||  
Target 5' ccacCCGCCUCGACCUCCC-- 3'
5 - 23
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000356929.3 | 3UTR | UGACCCACCCGCCUCGACCUCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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