miRTarBase - #MIRT693768


—
pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF383   
Synonyms HSD17
Description zinc finger protein 383
Transcript NM_152604   
Expression
Putative miRNA Targets on ZNF383
3'UTR of ZNF383
(miRNA target sites are highlighted)		 
>ZNF383|NM_152604|3'UTR
   1 TAAAAATTAAAGCCCCTGTCACCTTCCTCATATTTTAAACCAAAAATCATGTCTAATAGTTACCCTCTTCCGTAGTTTTT
  81 TTTAAAACTTTGTATTTAAATTTTGTATCCAAATGTATTTCATTCCAGGTTATAAATTCGGAGTCTAAAGTGACATTCCC
 161 TCTCTCCCCCAGTCATATACCGATGCCAGCTGTTCTATAATTCTTTCATTCATTGTTTTGTTCTACTTTCTTGGTGACAC
 241 ATTATACTCATGTTTATATT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucGGUCGGUUGAGUGUCAC-GUcu 5'
            :|:|  |:: :| |||| ||  
Target 5' atTCGG--AGTCTAAAGTGACAtt 3'
 136 - 157 97.00 -7.89
2 
miRNA  3' ucgGUCGGUUGA-GU---GUCACGUCu 5'
             :| |||| | :|   || | ||| 
Target 5' ttgTATCCAAATGTATTTCATTCCAGg 3'
 103 - 129 92.00 -7.50
3 
miRNA  3' ucGGUCGGUUGAGUGUCAC-GUCu 5'
            ||||:||  |  |: || ||| 
Target 5' ccCCAGTCATATACCGATGCCAGc 3'
 167 - 190 89.00 -13.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30612419 14 COSMIC
COSN21847013 79 COSMIC
COSN23810908 290 COSMIC
COSN27173600 482 COSMIC
COSN29146332 603 COSMIC
COSN25992761 677 COSMIC
COSN7125988 783 COSMIC
COSN9356562 1007 COSMIC
COSN21449309 1008 COSMIC
COSN21794001 1032 COSMIC
COSN17857441 1347 COSMIC
COSN15212693 1429 COSMIC
COSN31651242 1621 COSMIC
COSN32012892 1647 COSMIC
COSN25472590 1803 COSMIC
COSN8260115 1823 COSMIC
COSN25961366 1824 COSMIC
COSN6143743 2126 COSMIC
COSN24570763 2250 COSMIC
COSN27109372 2290 COSMIC
COSN21261182 2713 COSMIC
COSN16390807 2826 COSMIC
COSN14586604 2908 COSMIC
COSN17292002 2929 COSMIC
COSN23585788 2961 COSMIC
COSN27804483 3103 COSMIC
COSN26733248 3636 COSMIC
COSN27087988 3641 COSMIC
COSN25359742 4085 COSMIC
COSN20666710 4469 COSMIC
COSN15104528 4525 COSMIC
COSN6143744 4539 COSMIC
COSN5437713 4679 COSMIC
COSN19513058 4829 COSMIC
COSN1767543 4885 COSMIC
rs1234256 323 GWAS
rs1657508 323 GWAS
rs320891 323 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1248936648 1 dbSNP
rs1449071460 7 dbSNP
rs903052904 8 dbSNP
rs889137671 12 dbSNP
rs1300565486 13 dbSNP
rs377141566 15 dbSNP
rs550712725 16 dbSNP
rs779506910 17 dbSNP
rs746310164 19 dbSNP
rs1163262098 22 dbSNP
rs369569035 24 dbSNP
rs776068823 25 dbSNP
rs1455271263 32 dbSNP
rs1319443075 33 dbSNP
rs1388971723 41 dbSNP
rs1383701983 42 dbSNP
rs763409310 45 dbSNP
rs764181938 47 dbSNP
rs774463265 49 dbSNP
rs370772163 51 dbSNP
rs965235661 53 dbSNP
rs998012833 60 dbSNP
rs1387262915 70 dbSNP
rs996820663 71 dbSNP
rs753648787 72 dbSNP
rs952833958 73 dbSNP
rs1161449054 76 dbSNP
rs1471026998 80 dbSNP
rs984645851 84 dbSNP
rs951107232 85 dbSNP
rs1316902614 90 dbSNP
rs531720486 93 dbSNP
rs1196418627 94 dbSNP
rs1266695722 95 dbSNP
rs1213772056 99 dbSNP
rs1488555629 101 dbSNP
rs908623616 111 dbSNP
rs569257083 118 dbSNP
rs1267195558 132 dbSNP
rs969089875 140 dbSNP
rs539896187 141 dbSNP
rs1239624345 145 dbSNP
rs1196268595 154 dbSNP
rs928235227 155 dbSNP
rs1305986180 162 dbSNP
rs550221808 167 dbSNP
rs191556458 169 dbSNP
rs1330647581 171 dbSNP
rs938222031 179 dbSNP
rs988294094 182 dbSNP
rs150462324 183 dbSNP
rs1157837676 187 dbSNP
rs1417402905 193 dbSNP
rs915529011 198 dbSNP
rs947066644 203 dbSNP
rs1043219728 204 dbSNP
rs1351846325 205 dbSNP
rs902918193 221 dbSNP
rs934505698 226 dbSNP
rs1453238727 227 dbSNP
rs1458412111 230 dbSNP
rs1040830846 239 dbSNP
rs181103611 241 dbSNP
rs879341675 248 dbSNP
rs1216340159 263 dbSNP
rs1352039575 279 dbSNP
rs1028232378 280 dbSNP
rs943384149 281 dbSNP
rs1298552048 312 dbSNP
rs888486115 313 dbSNP
rs772582135 318 dbSNP
rs1657508 323 dbSNP
rs998073556 324 dbSNP
rs1016123210 326 dbSNP
rs1326955903 331 dbSNP
rs1297571199 353 dbSNP
rs186042367 373 dbSNP
rs1321954601 379 dbSNP
rs1243383027 387 dbSNP
rs886945972 392 dbSNP
rs1413579161 398 dbSNP
rs778620053 413 dbSNP
rs544488214 416 dbSNP
rs1016631243 419 dbSNP
rs1243186737 430 dbSNP
rs969582100 438 dbSNP
rs1035150651 443 dbSNP
rs556670424 444 dbSNP
rs1416173847 452 dbSNP
rs991514623 453 dbSNP
rs1424634357 455 dbSNP
rs960957951 456 dbSNP
rs915476167 459 dbSNP
rs575265869 461 dbSNP
rs149642883 468 dbSNP
rs1421440528 477 dbSNP
rs924380568 481 dbSNP
rs563817376 482 dbSNP
rs1040864199 489 dbSNP
rs1446750902 490 dbSNP
rs901046583 491 dbSNP
rs1357069869 494 dbSNP
rs1330542050 495 dbSNP
rs1410019735 501 dbSNP
rs979638746 502 dbSNP
rs910621690 508 dbSNP
rs1304406492 513 dbSNP
rs1420400633 514 dbSNP
rs1182806616 522 dbSNP
rs932482922 523 dbSNP
rs1395133867 525 dbSNP
rs1312271722 528 dbSNP
rs1355299656 530 dbSNP
rs1050132086 531 dbSNP
rs1438430628 532 dbSNP
rs777408956 537 dbSNP
rs1240254737 541 dbSNP
rs1287283542 548 dbSNP
rs1196620599 552 dbSNP
rs528122564 556 dbSNP
rs1336867931 558 dbSNP
rs1005979655 565 dbSNP
rs976081872 566 dbSNP
rs1442524473 569 dbSNP
rs540223911 570 dbSNP
rs933871475 576 dbSNP
rs1464458840 583 dbSNP
rs1397314881 588 dbSNP
rs1166180883 594 dbSNP
rs371295657 601 dbSNP
rs1423573484 603 dbSNP
rs1412122054 607 dbSNP
rs1015572366 611 dbSNP
rs1239634416 612 dbSNP
rs1046974633 625 dbSNP
rs897249356 631 dbSNP
rs760540990 645 dbSNP
rs941194988 646 dbSNP
rs1003597611 651 dbSNP
rs58879592 655 dbSNP
rs1181565626 660 dbSNP
rs1241346120 662 dbSNP
rs539835444 666 dbSNP
rs1265939373 671 dbSNP
rs561658077 672 dbSNP
rs1319658293 677 dbSNP
rs529142104 679 dbSNP
rs1441561221 680 dbSNP
rs1375699005 683 dbSNP
rs1306708432 697 dbSNP
rs1035096875 700 dbSNP
rs1371151265 703 dbSNP
rs959568835 705 dbSNP
rs746585132 706 dbSNP
rs766399722 717 dbSNP
rs1263009615 719 dbSNP
rs1022981755 721 dbSNP
rs527922848 722 dbSNP
rs1420767831 729 dbSNP
rs547778470 736 dbSNP
rs1002374269 737 dbSNP
rs569002896 744 dbSNP
rs924246189 745 dbSNP
rs776002205 748 dbSNP
rs1487471569 757 dbSNP
rs1009786708 761 dbSNP
rs12975869 763 dbSNP
rs976509955 773 dbSNP
rs922338768 776 dbSNP
rs932507106 780 dbSNP
rs1352783378 781 dbSNP
rs112630324 783 dbSNP
rs909808724 784 dbSNP
rs1347915222 785 dbSNP
rs1300009537 788 dbSNP
rs554513935 789 dbSNP
rs1018204643 792 dbSNP
rs534224424 800 dbSNP
rs897195551 801 dbSNP
rs1003543801 806 dbSNP
rs1157041981 815 dbSNP
rs745555585 816 dbSNP
rs923264284 822 dbSNP
rs1175457948 826 dbSNP
rs1261424623 831 dbSNP
rs1421551584 832 dbSNP
rs1194358338 851 dbSNP
rs1487820362 859 dbSNP
rs1056588946 862 dbSNP
rs1212508729 865 dbSNP
rs895201402 867 dbSNP
rs908448771 869 dbSNP
rs770012117 875 dbSNP
rs1308800335 876 dbSNP
rs1280614228 881 dbSNP
rs1038177362 901 dbSNP
rs1340242152 903 dbSNP
rs775925709 904 dbSNP
rs905041772 905 dbSNP
rs1403175863 912 dbSNP
rs1302542227 913 dbSNP
rs937735251 916 dbSNP
rs968712239 917 dbSNP
rs999814632 921 dbSNP
rs1477464132 923 dbSNP
rs1174029603 925 dbSNP
rs1031209656 927 dbSNP
rs1424241388 929 dbSNP
rs1255021755 930 dbSNP
rs1198412890 933 dbSNP
rs1481306282 935 dbSNP
rs1258172093 936 dbSNP
rs1199754657 938 dbSNP
rs1317844195 939 dbSNP
rs190449465 943 dbSNP
rs1247424897 947 dbSNP
rs1341491815 949 dbSNP
rs1312236730 952 dbSNP
rs1394537931 956 dbSNP
rs1330058904 958 dbSNP
rs912496588 959 dbSNP
rs1332135990 962 dbSNP
rs904077539 963 dbSNP
rs769206109 967 dbSNP
rs567866463 971 dbSNP
rs1001544908 974 dbSNP
rs1017733290 975 dbSNP
rs922370049 979 dbSNP
rs953797584 981 dbSNP
rs1277064942 982 dbSNP
rs985700473 993 dbSNP
rs1184900182 994 dbSNP
rs182734635 995 dbSNP
rs752423637 996 dbSNP
rs1281797037 1000 dbSNP
rs1036991632 1003 dbSNP
rs918490683 1005 dbSNP
rs1320245475 1007 dbSNP
rs1199580037 1008 dbSNP
rs189078185 1011 dbSNP
rs774388223 1012 dbSNP
rs1223868501 1015 dbSNP
rs1247169467 1021 dbSNP
rs1379394391 1030 dbSNP
rs1477668699 1033 dbSNP
rs141984827 1035 dbSNP
rs115915920 1037 dbSNP
rs117930310 1050 dbSNP
rs773267856 1065 dbSNP
rs1387305078 1066 dbSNP
rs775109302 1075 dbSNP
rs1161246488 1076 dbSNP
rs909228802 1078 dbSNP
rs1380515097 1095 dbSNP
rs760957698 1101 dbSNP
rs1477943199 1108 dbSNP
rs1169598712 1111 dbSNP
rs191879069 1114 dbSNP
rs1437241292 1119 dbSNP
rs764560716 1122 dbSNP
rs752050379 1123 dbSNP
rs1350928963 1124 dbSNP
rs1404932898 1135 dbSNP
rs1301672459 1137 dbSNP
rs937832070 1145 dbSNP
rs1208421678 1146 dbSNP
rs1356356443 1151 dbSNP
rs574337692 1152 dbSNP
rs1056335984 1153 dbSNP
rs917661950 1154 dbSNP
rs1000083133 1157 dbSNP
rs1437027364 1158 dbSNP
rs1330444104 1159 dbSNP
rs1342838935 1164 dbSNP
rs1031243302 1165 dbSNP
rs1360974872 1169 dbSNP
rs1219647283 1172 dbSNP
rs1297152446 1174 dbSNP
rs539847807 1181 dbSNP
rs966239512 1194 dbSNP
rs997825187 1196 dbSNP
rs182919409 1199 dbSNP
rs903524977 1219 dbSNP
rs1477444607 1220 dbSNP
rs1001090729 1225 dbSNP
rs529193000 1229 dbSNP
rs1039688068 1233 dbSNP
rs900792701 1236 dbSNP
rs1216094272 1245 dbSNP
rs998074319 1251 dbSNP
rs764884115 1269 dbSNP
rs1344461848 1273 dbSNP
rs1490156161 1274 dbSNP
rs1220256321 1277 dbSNP
rs1265048203 1279 dbSNP
rs1272969823 1282 dbSNP
rs950773569 1301 dbSNP
rs985264530 1302 dbSNP
rs1017093626 1304 dbSNP
rs1277341574 1311 dbSNP
rs1488463919 1313 dbSNP
rs1397673209 1316 dbSNP
rs1360526251 1317 dbSNP
rs962599195 1328 dbSNP
rs1413381672 1330 dbSNP
rs752597432 1333 dbSNP
rs1399478899 1334 dbSNP
rs116264469 1347 dbSNP
rs758404964 1348 dbSNP
rs980158062 1351 dbSNP
rs1163312708 1353 dbSNP
rs959349593 1355 dbSNP
rs187554013 1356 dbSNP
rs562615645 1358 dbSNP
rs751090727 1361 dbSNP
rs945070660 1364 dbSNP
rs1162159418 1366 dbSNP
rs111776128 1367 dbSNP
rs191874917 1368 dbSNP
rs948045655 1373 dbSNP
rs780782993 1375 dbSNP
rs1324883363 1378 dbSNP
rs936331597 1379 dbSNP
rs146297542 1384 dbSNP
rs139634030 1386 dbSNP
rs997791868 1395 dbSNP
rs1338134389 1396 dbSNP
rs1332799163 1398 dbSNP
rs1052529261 1399 dbSNP
rs886610774 1400 dbSNP
rs1170652537 1401 dbSNP
rs902106961 1402 dbSNP
rs549418696 1403 dbSNP
rs567616241 1404 dbSNP
rs1287996713 1405 dbSNP
rs1354368049 1406 dbSNP
rs889501299 1407 dbSNP
rs1204277474 1411 dbSNP
rs1259458856 1412 dbSNP
rs12982790 1413 dbSNP
rs1196706995 1417 dbSNP
rs1187886766 1418 dbSNP
rs1016715532 1420 dbSNP
rs1442167973 1423 dbSNP
rs1180005209 1425 dbSNP
rs1382646218 1426 dbSNP
rs1034370308 1429 dbSNP
rs959530126 1434 dbSNP
rs962751077 1440 dbSNP
rs1446852360 1441 dbSNP
rs972561812 1441 dbSNP
rs1331212518 1444 dbSNP
rs1440671370 1446 dbSNP
rs1383338232 1454 dbSNP
rs1025446991 1455 dbSNP
rs977959998 1461 dbSNP
rs184161328 1468 dbSNP
rs1335037453 1469 dbSNP
rs992114332 1470 dbSNP
rs12983699 1471 dbSNP
rs368129716 1472 dbSNP
rs979813231 1473 dbSNP
rs1287676904 1474 dbSNP
rs1240459590 1478 dbSNP
rs925408905 1482 dbSNP
rs553902194 1484 dbSNP
rs933527949 1485 dbSNP
rs1051973043 1491 dbSNP
rs769132817 1492 dbSNP
rs371914216 1494 dbSNP
rs375172827 1495 dbSNP
rs1300222051 1496 dbSNP
rs1346787862 1503 dbSNP
rs533610685 1504 dbSNP
rs756204891 1504 dbSNP
rs187657538 1505 dbSNP
rs1459718568 1506 dbSNP
rs1199953919 1508 dbSNP
rs1050726599 1509 dbSNP
rs889356030 1513 dbSNP
rs59829701 1516 dbSNP
rs1190585458 1520 dbSNP
rs57759629 1526 dbSNP
rs1216807000 1533 dbSNP
rs898254460 1535 dbSNP
rs58346639 1536 dbSNP
rs369711788 1541 dbSNP
rs373479488 1543 dbSNP
rs1025396078 1544 dbSNP
rs1177646001 1548 dbSNP
rs58623736 1558 dbSNP
rs960552831 1560 dbSNP
rs376800794 1566 dbSNP
rs1333411900 1568 dbSNP
rs368953002 1571 dbSNP
rs543857798 1573 dbSNP
rs1390737762 1574 dbSNP
rs1304695738 1575 dbSNP
rs1332792108 1577 dbSNP
rs562838593 1579 dbSNP
rs57192536 1580 dbSNP
rs773357935 1585 dbSNP
rs113443143 1590 dbSNP
rs1259203121 1593 dbSNP
rs1183270412 1596 dbSNP
rs958003336 1597 dbSNP
rs974519972 1602 dbSNP
rs553344067 1603 dbSNP
rs1322034933 1606 dbSNP
rs932978796 1607 dbSNP
rs987136511 1610 dbSNP
rs34697668 1611 dbSNP
rs572045459 1611 dbSNP
rs925241589 1613 dbSNP
rs940973015 1618 dbSNP
rs1398025433 1621 dbSNP
rs766691958 1626 dbSNP
rs1379908176 1632 dbSNP
rs1302335184 1644 dbSNP
rs1037812783 1645 dbSNP
rs560360076 1678 dbSNP
rs956697864 1689 dbSNP
rs1248989479 1692 dbSNP
rs1464879415 1693 dbSNP
rs150562678 1700 dbSNP
rs923340923 1705 dbSNP
rs549533377 1725 dbSNP
rs1200574391 1742 dbSNP
rs1429074985 1744 dbSNP
rs1051005346 1748 dbSNP
rs910805208 1751 dbSNP
rs777416382 1752 dbSNP
rs1055877729 1764 dbSNP
rs1373861520 1770 dbSNP
rs1461508783 1777 dbSNP
rs1296545493 1781 dbSNP
rs1249984610 1788 dbSNP
rs762889488 1791 dbSNP
rs1247174869 1795 dbSNP
rs1322548891 1795 dbSNP
rs942240006 1799 dbSNP
rs1322489411 1800 dbSNP
rs1379259161 1803 dbSNP
rs1392764203 1803 dbSNP
rs1331899604 1806 dbSNP
rs1037947974 1807 dbSNP
rs1049193621 1811 dbSNP
rs895928194 1811 dbSNP
rs1014246009 1812 dbSNP
rs1458274912 1812 dbSNP
rs1041769743 1814 dbSNP
rs1161327731 1815 dbSNP
rs1211988396 1815 dbSNP
rs1249114861 1815 dbSNP
rs1380397861 1815 dbSNP
rs1437759621 1815 dbSNP
rs1489039109 1815 dbSNP
rs35896350 1815 dbSNP
rs374164904 1815 dbSNP
rs902403047 1818 dbSNP
rs851528 1819 dbSNP
rs376584870 1820 dbSNP
rs1220247312 1821 dbSNP
rs1238507214 1822 dbSNP
rs563963410 1823 dbSNP
rs957903950 1824 dbSNP
rs1046874587 1825 dbSNP
rs1300843850 1827 dbSNP
rs1266752648 1831 dbSNP
rs1359042602 1832 dbSNP
rs1223974484 1833 dbSNP
rs1380302333 1835 dbSNP
rs34845070 1839 dbSNP
rs397801600 1841 dbSNP
rs1362543387 1842 dbSNP
rs1489945755 1843 dbSNP
rs1028737666 1845 dbSNP
rs1434083061 1846 dbSNP
rs1262633381 1851 dbSNP
rs11671358 1855 dbSNP
rs1220453478 1860 dbSNP
rs1489391838 1861 dbSNP
rs987082629 1862 dbSNP
rs1370335727 1865 dbSNP
rs907566685 1874 dbSNP
rs1276504611 1876 dbSNP
rs1425204732 1883 dbSNP
rs962232493 1884 dbSNP
rs1344570536 1889 dbSNP
rs973691842 1895 dbSNP
rs1401681241 1898 dbSNP
rs543265344 1904 dbSNP
rs562974909 1905 dbSNP
rs1023850590 1907 dbSNP
rs969341450 1914 dbSNP
rs1001225507 1915 dbSNP
rs1174777462 1916 dbSNP
rs1032219555 1917 dbSNP
rs956730041 1924 dbSNP
rs1056390883 1932 dbSNP
rs1197696802 1937 dbSNP
rs988091571 1938 dbSNP
rs950127150 1940 dbSNP
rs1041715696 1941 dbSNP
rs1244622510 1943 dbSNP
rs903186776 1948 dbSNP
rs1200896029 1952 dbSNP
rs923373471 1956 dbSNP
rs999409752 1957 dbSNP
rs1219218017 1959 dbSNP
rs764000913 1960 dbSNP
rs751501499 1961 dbSNP
rs1485660503 1962 dbSNP
rs1269184526 1967 dbSNP
rs1053701646 1968 dbSNP
rs1258545478 1970 dbSNP
rs1341670575 1971 dbSNP
rs1445240735 1973 dbSNP
rs1334243359 1979 dbSNP
rs1468887544 1988 dbSNP
rs1183101882 1989 dbSNP
rs893752150 2000 dbSNP
rs1421495478 2001 dbSNP
rs1159528416 2003 dbSNP
rs757219467 2009 dbSNP
rs770744524 2010 dbSNP
rs1344457409 2011 dbSNP
rs531912594 2012 dbSNP
rs1451160913 2013 dbSNP
rs996002643 2019 dbSNP
rs562164082 2036 dbSNP
rs1304164170 2038 dbSNP
rs910743640 2045 dbSNP
rs1474550403 2046 dbSNP
rs1451215544 2053 dbSNP
rs766876873 2056 dbSNP
rs750003355 2057 dbSNP
rs1188313339 2058 dbSNP
rs755713083 2061 dbSNP
rs942207002 2062 dbSNP
rs1316638598 2065 dbSNP
rs1214093051 2067 dbSNP
rs1200486518 2069 dbSNP
rs1038381283 2073 dbSNP
rs1461958466 2075 dbSNP
rs1029269867 2076 dbSNP
rs919495010 2077 dbSNP
rs190697737 2078 dbSNP
rs1046740355 2080 dbSNP
rs1335262646 2087 dbSNP
rs1449671866 2089 dbSNP
rs896240088 2091 dbSNP
rs1328591539 2092 dbSNP
rs1441461659 2095 dbSNP
rs1013718801 2098 dbSNP
rs779734380 2100 dbSNP
rs1416197802 2103 dbSNP
rs182028639 2105 dbSNP
rs1226597 2106 dbSNP
rs1180368594 2107 dbSNP
rs1480916409 2109 dbSNP
rs184588651 2113 dbSNP
rs796764062 2114 dbSNP
rs1453154204 2115 dbSNP
rs748547216 2125 dbSNP
rs767426106 2129 dbSNP
rs959242210 2133 dbSNP
rs1009544055 2137 dbSNP
rs1030253704 2152 dbSNP
rs954722682 2154 dbSNP
rs991645307 2156 dbSNP
rs1442311042 2160 dbSNP
rs1440425885 2162 dbSNP
rs188134347 2164 dbSNP
rs1303933450 2165 dbSNP
rs1363719197 2166 dbSNP
rs1017668284 2174 dbSNP
rs772694317 2175 dbSNP
rs139546466 2179 dbSNP
rs926645162 2180 dbSNP
rs973566215 2188 dbSNP
rs1221194698 2190 dbSNP
rs936011978 2194 dbSNP
rs1054884834 2199 dbSNP
rs1216672590 2202 dbSNP
rs1315850643 2203 dbSNP
rs1285642423 2208 dbSNP
rs1324506211 2216 dbSNP
rs537855903 2226 dbSNP
rs929504280 2227 dbSNP
rs982452563 2240 dbSNP
rs1205317384 2243 dbSNP
rs555837300 2245 dbSNP
rs149716101 2246 dbSNP
rs1045242730 2258 dbSNP
rs545288220 2259 dbSNP
rs936516555 2271 dbSNP
rs1156772471 2276 dbSNP
rs890297253 2278 dbSNP
rs560461708 2279 dbSNP
rs181320619 2280 dbSNP
rs185495463 2281 dbSNP
rs566062840 2282 dbSNP
rs1440706689 2283 dbSNP
rs1485230958 2284 dbSNP
rs1305338450 2288 dbSNP
rs897603386 2291 dbSNP
rs1214189786 2311 dbSNP
rs1326273838 2315 dbSNP
rs147862515 2316 dbSNP
rs1223249557 2319 dbSNP
rs1344061541 2322 dbSNP
rs1280286053 2323 dbSNP
rs1383008077 2327 dbSNP
rs1404734574 2333 dbSNP
rs1287190800 2335 dbSNP
rs10418461 2336 dbSNP
rs958962489 2337 dbSNP
rs1175663768 2349 dbSNP
rs1467997994 2350 dbSNP
rs1425534947 2353 dbSNP
rs1170635427 2354 dbSNP
rs1007545200 2357 dbSNP
rs552072751 2358 dbSNP
rs1341775163 2360 dbSNP
rs992153708 2365 dbSNP
rs1215213750 2367 dbSNP
rs1018118076 2368 dbSNP
rs1244251412 2376 dbSNP
rs550172616 2379 dbSNP
rs1224703385 2381 dbSNP
rs1253454989 2383 dbSNP
rs774299387 2385 dbSNP
rs1228701525 2393 dbSNP
rs1307127845 2397 dbSNP
rs1293761374 2403 dbSNP
rs1248220122 2409 dbSNP
rs1383657480 2414 dbSNP
rs111679286 2421 dbSNP
rs1450373411 2422 dbSNP
rs1026451277 2431 dbSNP
rs1298528395 2439 dbSNP
rs1461345337 2441 dbSNP
rs1370955090 2456 dbSNP
rs532359583 2457 dbSNP
rs993120275 2460 dbSNP
rs1384088181 2462 dbSNP
rs767554669 2468 dbSNP
rs1183448860 2470 dbSNP
rs181615654 2472 dbSNP
rs990136775 2481 dbSNP
rs1475566941 2483 dbSNP
rs949103219 2494 dbSNP
rs1480531879 2496 dbSNP
rs1249793772 2498 dbSNP
rs10418729 2500 dbSNP
rs931886311 2507 dbSNP
rs1291269734 2509 dbSNP
rs1314469059 2511 dbSNP
rs1243956869 2512 dbSNP
rs1337449854 2513 dbSNP
rs1408704065 2526 dbSNP
rs1307666606 2527 dbSNP
rs1165958053 2530 dbSNP
rs1394098411 2541 dbSNP
rs186619152 2542 dbSNP
rs890413922 2546 dbSNP
rs1301707296 2553 dbSNP
rs936397679 2560 dbSNP
rs1161122723 2563 dbSNP
rs753425176 2573 dbSNP
rs1441059445 2575 dbSNP
rs892337168 2576 dbSNP
rs944526662 2577 dbSNP
rs868492380 2585 dbSNP
rs1036183004 2586 dbSNP
rs1418809971 2587 dbSNP
rs945191391 2590 dbSNP
rs1051658261 2591 dbSNP
rs1248873736 2593 dbSNP
rs1328391785 2593 dbSNP
rs1291387543 2594 dbSNP
rs1490573311 2594 dbSNP
rs1431835483 2599 dbSNP
rs897545169 2606 dbSNP
rs530267458 2608 dbSNP
rs890348136 2616 dbSNP
rs1261190223 2640 dbSNP
rs1238261334 2641 dbSNP
rs1333700744 2672 dbSNP
rs1284956774 2677 dbSNP
rs1405395566 2678 dbSNP
rs1359884385 2685 dbSNP
rs1344455722 2687 dbSNP
rs1007990634 2694 dbSNP
rs1027283402 2697 dbSNP
rs75613737 2699 dbSNP
rs567356448 2707 dbSNP
rs994956620 2708 dbSNP
rs1219951938 2712 dbSNP
rs1286137018 2721 dbSNP
rs1447214863 2723 dbSNP
rs539445755 2732 dbSNP
rs1362634509 2734 dbSNP
rs1192100964 2744 dbSNP
rs1202021999 2747 dbSNP
rs1480996687 2754 dbSNP
rs779237726 2757 dbSNP
rs950886049 2766 dbSNP
rs1445854490 2767 dbSNP
rs1183706430 2768 dbSNP
rs1386353614 2770 dbSNP
rs1424627199 2771 dbSNP
rs1014419526 2772 dbSNP
rs1024992202 2782 dbSNP
rs753172679 2806 dbSNP
rs537514212 2812 dbSNP
rs1264985792 2819 dbSNP
rs1223869496 2821 dbSNP
rs1322586510 2822 dbSNP
rs1162049974 2827 dbSNP
rs1280914616 2829 dbSNP
rs926340599 2833 dbSNP
rs376868198 2834 dbSNP
rs1317013663 2835 dbSNP
rs145061538 2836 dbSNP
rs1387063171 2837 dbSNP
rs1179258528 2845 dbSNP
rs1470479623 2846 dbSNP
rs913639723 2850 dbSNP
rs1429044892 2851 dbSNP
rs538616421 2851 dbSNP
rs945223929 2857 dbSNP
rs1476512131 2860 dbSNP
rs1343684074 2862 dbSNP
rs1192537252 2874 dbSNP
rs1445394434 2877 dbSNP
rs1051581405 2880 dbSNP
rs1204243081 2882 dbSNP
rs147553090 2883 dbSNP
rs535186694 2884 dbSNP
rs545219315 2892 dbSNP
rs1216176554 2897 dbSNP
rs1339641972 2903 dbSNP
rs1224571740 2905 dbSNP
rs1269280232 2905 dbSNP
rs1384391625 2906 dbSNP
rs957451233 2907 dbSNP
rs1453992050 2909 dbSNP
rs990649530 2910 dbSNP
rs921394008 2913 dbSNP
rs954185477 2918 dbSNP
rs77843890 2927 dbSNP
rs943266446 2928 dbSNP
rs1039355545 2934 dbSNP
rs553382633 2936 dbSNP
rs750970724 2937 dbSNP
rs1447677157 2941 dbSNP
rs1387173751 2943 dbSNP
rs368925901 2950 dbSNP
rs1047872845 2951 dbSNP
rs1243773855 2953 dbSNP
rs1241259702 2956 dbSNP
rs868242533 2956 dbSNP
rs911797627 2956 dbSNP
rs148515068 2957 dbSNP
rs1271802359 2959 dbSNP
rs886495430 2960 dbSNP
rs1014450687 2961 dbSNP
rs1315130475 2962 dbSNP
rs113749475 2963 dbSNP
rs970725996 2964 dbSNP
rs1462396277 2970 dbSNP
rs60065505 2981 dbSNP
rs1444760141 2986 dbSNP
rs1033659521 2998 dbSNP
rs1355498875 3006 dbSNP
rs778392184 3008 dbSNP
rs1444544985 3015 dbSNP
rs1367765041 3018 dbSNP
rs183792188 3020 dbSNP
rs989075540 3022 dbSNP
rs543588681 3029 dbSNP
rs913670951 3032 dbSNP
rs907421959 3036 dbSNP
rs1470694074 3042 dbSNP
rs966392704 3048 dbSNP
rs1470356849 3052 dbSNP
rs987717888 3053 dbSNP
rs911763003 3055 dbSNP
rs553668049 3066 dbSNP
rs1031803492 3069 dbSNP
rs1490733973 3071 dbSNP
rs1292111530 3106 dbSNP
rs943194937 3114 dbSNP
rs1356680137 3115 dbSNP
rs1406032689 3117 dbSNP
rs1038974915 3119 dbSNP
rs1471102852 3121 dbSNP
rs1279336991 3131 dbSNP
rs920498754 3132 dbSNP
rs1347598633 3138 dbSNP
rs930645890 3140 dbSNP
rs1047738397 3141 dbSNP
rs565020067 3145 dbSNP
rs573538167 3146 dbSNP
rs1161114584 3154 dbSNP
rs766346251 3171 dbSNP
rs1401212591 3173 dbSNP
rs954186056 3192 dbSNP
rs532419787 3194 dbSNP
rs1336313279 3199 dbSNP
rs541014204 3207 dbSNP
rs1481317073 3210 dbSNP
rs1046227392 3224 dbSNP
rs1198263095 3232 dbSNP
rs1243354290 3234 dbSNP
rs906052595 3234 dbSNP
rs1277608470 3235 dbSNP
rs1215974416 3244 dbSNP
rs1318036476 3258 dbSNP
rs1284240934 3267 dbSNP
rs971964361 3271 dbSNP
rs1326140788 3272 dbSNP
rs117214094 3274 dbSNP
rs320881 3285 dbSNP
rs1048909951 3286 dbSNP
rs1290693077 3295 dbSNP
rs1431635217 3307 dbSNP
rs893364212 3308 dbSNP
rs780120049 3310 dbSNP
rs1156892449 3312 dbSNP
rs1010530225 3313 dbSNP
rs1429746691 3318 dbSNP
rs1459533413 3322 dbSNP
rs948462518 3325 dbSNP
rs1045400584 3336 dbSNP
rs1197068144 3338 dbSNP
rs1186574475 3351 dbSNP
rs1020543222 3355 dbSNP
rs557590096 3361 dbSNP
rs906868916 3361 dbSNP
rs966342115 3369 dbSNP
rs548785112 3374 dbSNP
rs570114924 3376 dbSNP
rs1019092404 3380 dbSNP
rs771092848 3382 dbSNP
rs1053779201 3395 dbSNP
rs1310639683 3405 dbSNP
rs964605164 3410 dbSNP
rs893414367 3411 dbSNP
rs1012148914 3445 dbSNP
rs1318386875 3454 dbSNP
rs1481534824 3456 dbSNP
rs1177347796 3465 dbSNP
rs974953927 3467 dbSNP
rs920531296 3476 dbSNP
rs1464578411 3477 dbSNP
rs1355892583 3480 dbSNP
rs531117412 3482 dbSNP
rs1170748610 3493 dbSNP
rs377372328 3496 dbSNP
rs1008270353 3504 dbSNP
rs142069771 3505 dbSNP
rs907912889 3510 dbSNP
rs1244346621 3512 dbSNP
rs1200204034 3515 dbSNP
rs1482497640 3517 dbSNP
rs1253239685 3533 dbSNP
rs950072624 3535 dbSNP
rs1045841975 3541 dbSNP
rs1205501937 3547 dbSNP
rs571362644 3553 dbSNP
rs1326588664 3554 dbSNP
rs73627757 3556 dbSNP
rs961350206 3560 dbSNP
rs867087037 3571 dbSNP
rs553756413 3581 dbSNP
rs753975058 3586 dbSNP
rs1026630699 3588 dbSNP
rs1394030108 3589 dbSNP
rs937542039 3594 dbSNP
rs755190950 3597 dbSNP
rs1320997887 3605 dbSNP
rs952025646 3610 dbSNP
rs1164911708 3619 dbSNP
rs1424788343 3621 dbSNP
rs1251424011 3627 dbSNP
rs1340675081 3632 dbSNP
rs1054512952 3653 dbSNP
rs1195787964 3655 dbSNP
rs893396847 3660 dbSNP
rs188056463 3669 dbSNP
rs1253101637 3671 dbSNP
rs915762527 3672 dbSNP
rs1490923955 3678 dbSNP
rs1482846139 3682 dbSNP
rs948410171 3686 dbSNP
rs981195341 3690 dbSNP
rs1360301169 3691 dbSNP
rs1264744411 3694 dbSNP
rs536124617 3697 dbSNP
rs561721948 3698 dbSNP
rs554834713 3701 dbSNP
rs928409662 3709 dbSNP
rs576187753 3711 dbSNP
rs1307422527 3725 dbSNP
rs1409038499 3731 dbSNP
rs1348205265 3733 dbSNP
rs543602439 3733 dbSNP
rs746026334 3744 dbSNP
rs1304614063 3751 dbSNP
rs1195380534 3753 dbSNP
rs770195817 3764 dbSNP
rs1364420248 3769 dbSNP
rs1020491087 3775 dbSNP
rs746758532 3778 dbSNP
rs1456833723 3789 dbSNP
rs1366121208 3794 dbSNP
rs1461554327 3796 dbSNP
rs1166560688 3802 dbSNP
rs1052819883 3812 dbSNP
rs902211578 3825 dbSNP
rs1249844778 3833 dbSNP
rs1425007045 3842 dbSNP
rs1008967445 3845 dbSNP
rs1018710681 3849 dbSNP
rs558669721 3864 dbSNP
rs893352861 3879 dbSNP
rs1352725899 3881 dbSNP
rs1295659579 3884 dbSNP
rs964794687 3885 dbSNP
rs320882 3886 dbSNP
rs563218120 3888 dbSNP
rs1321655749 3893 dbSNP
rs1284739625 3894 dbSNP
rs541028214 3908 dbSNP
rs1223664720 3916 dbSNP
rs1291563310 3929 dbSNP
rs1320994139 3936 dbSNP
rs983408756 3942 dbSNP
rs1188444171 3943 dbSNP
rs189816274 3949 dbSNP
rs1008385229 3964 dbSNP
rs907788157 3966 dbSNP
rs79845946 3967 dbSNP
rs117799021 3969 dbSNP
rs927419969 3970 dbSNP
rs1386988899 3972 dbSNP
rs1445208257 3979 dbSNP
rs375089843 3981 dbSNP
rs1196807085 3985 dbSNP
rs984724959 3986 dbSNP
rs1022768839 3991 dbSNP
rs969878431 3994 dbSNP
rs531059202 4001 dbSNP
rs981297581 4003 dbSNP
rs1455166975 4005 dbSNP
rs1289020191 4007 dbSNP
rs928357394 4008 dbSNP
rs1223947293 4009 dbSNP
rs543235029 4009 dbSNP
rs934413353 4009 dbSNP
rs937395214 4013 dbSNP
rs988860057 4019 dbSNP
rs1432206370 4023 dbSNP
rs914246281 4027 dbSNP
rs773165516 4054 dbSNP
rs947593988 4058 dbSNP
rs1054457270 4064 dbSNP
rs1385580346 4069 dbSNP
rs1339092383 4073 dbSNP
rs1415442663 4078 dbSNP
rs760536673 4080 dbSNP
rs1171057407 4085 dbSNP
rs143057810 4090 dbSNP
rs944190908 4090 dbSNP
rs1373719408 4092 dbSNP
rs1188079098 4102 dbSNP
rs1447565218 4105 dbSNP
rs1019282277 4107 dbSNP
rs1244943350 4110 dbSNP
rs1041986259 4112 dbSNP
rs891338135 4113 dbSNP
rs1008565683 4114 dbSNP
rs1320219503 4126 dbSNP
rs1218418147 4146 dbSNP
rs1339398440 4150 dbSNP
rs1273281543 4152 dbSNP
rs765820891 4156 dbSNP
rs1261478591 4159 dbSNP
rs564975787 4176 dbSNP
rs1317812749 4192 dbSNP
rs1449145395 4198 dbSNP
rs532217501 4199 dbSNP
rs1268466795 4206 dbSNP
rs996355527 4207 dbSNP
rs373891095 4209 dbSNP
rs1371461152 4210 dbSNP
rs565712150 4211 dbSNP
rs1427955436 4214 dbSNP
rs536220405 4216 dbSNP
rs1004686779 4221 dbSNP
rs994278804 4242 dbSNP
rs1014853539 4243 dbSNP
rs548232396 4259 dbSNP
rs1027360021 4261 dbSNP
rs971698624 4262 dbSNP
rs1411543579 4263 dbSNP
rs1361000843 4274 dbSNP
rs1294513209 4275 dbSNP
rs1229398123 4284 dbSNP
rs1356338890 4286 dbSNP
rs769373557 4299 dbSNP
rs1282770543 4305 dbSNP
rs559805339 4308 dbSNP
rs1351303323 4315 dbSNP
rs927316183 4329 dbSNP
rs879744467 4330 dbSNP
rs368012234 4333 dbSNP
rs752981829 4334 dbSNP
rs1411611685 4344 dbSNP
rs969993564 4350 dbSNP
rs1472819501 4355 dbSNP
rs778027802 4357 dbSNP
rs946226355 4358 dbSNP
rs1451282643 4364 dbSNP
rs1490677976 4365 dbSNP
rs1246775236 4366 dbSNP
rs1041828794 4367 dbSNP
rs1302734710 4367 dbSNP
rs1377644590 4368 dbSNP
rs1288392585 4375 dbSNP
rs752036155 4376 dbSNP
rs1225805265 4379 dbSNP
rs1287905037 4380 dbSNP
rs912830439 4397 dbSNP
rs370671534 4398 dbSNP
rs1039941707 4400 dbSNP
rs1265245530 4409 dbSNP
rs1435914037 4413 dbSNP
rs796479694 4413 dbSNP
rs762588565 4414 dbSNP
rs375125118 4419 dbSNP
rs536865424 4420 dbSNP
rs1235618306 4425 dbSNP
rs1048852400 4427 dbSNP
rs914341543 4433 dbSNP
rs1425485282 4437 dbSNP
rs887488039 4444 dbSNP
rs1487235321 4445 dbSNP
rs968411477 4449 dbSNP
rs1481606654 4450 dbSNP
rs1465579629 4454 dbSNP
rs1267891659 4457 dbSNP
rs1207292332 4480 dbSNP
rs1004739095 4496 dbSNP
rs533329985 4505 dbSNP
rs1015144138 4508 dbSNP
rs1177542307 4514 dbSNP
rs1218682459 4516 dbSNP
rs971243188 4520 dbSNP
rs1003226855 4533 dbSNP
rs1249640957 4534 dbSNP
rs1271792120 4534 dbSNP
rs1471400025 4535 dbSNP
rs985552925 4545 dbSNP
rs771706785 4551 dbSNP
rs1429591559 4562 dbSNP
rs148217930 4563 dbSNP
rs1468784539 4564 dbSNP
rs182125198 4566 dbSNP
rs1174946505 4574 dbSNP
rs1430896558 4575 dbSNP
rs368457706 4580 dbSNP
rs1188721091 4582 dbSNP
rs1450625019 4583 dbSNP
rs911460671 4587 dbSNP
rs944306493 4608 dbSNP
rs1357897692 4609 dbSNP
rs1484461658 4617 dbSNP
rs1256750519 4623 dbSNP
rs1252591721 4624 dbSNP
rs1445074706 4626 dbSNP
rs1310733443 4635 dbSNP
rs958993256 4638 dbSNP
rs1299085922 4645 dbSNP
rs368286916 4647 dbSNP
rs990074997 4665 dbSNP
rs914661017 4669 dbSNP
rs1469608688 4670 dbSNP
rs757850221 4682 dbSNP
rs1276848209 4706 dbSNP
rs1229288939 4712 dbSNP
rs576948296 4728 dbSNP
rs1295353532 4735 dbSNP
rs1041172265 4742 dbSNP
rs1379643305 4749 dbSNP
rs1350191500 4763 dbSNP
rs187249779 4768 dbSNP
rs912749746 4775 dbSNP
rs191662333 4776 dbSNP
rs1168650806 4784 dbSNP
rs1324565188 4785 dbSNP
rs1218698593 4787 dbSNP
rs1048465275 4796 dbSNP
rs1390058317 4807 dbSNP
rs1187254074 4809 dbSNP
rs1425855628 4815 dbSNP
rs1257293743 4819 dbSNP
rs1181699168 4822 dbSNP
rs944199532 4829 dbSNP
rs1254288130 4836 dbSNP
rs1175435839 4837 dbSNP
rs888553265 4844 dbSNP
rs1341567823 4858 dbSNP
rs1272318977 4860 dbSNP
rs1246909207 4861 dbSNP
rs185417529 4865 dbSNP
rs1205209151 4871 dbSNP
rs1311732454 4873 dbSNP
rs1394123581 4875 dbSNP
rs1415823911 4881 dbSNP
rs1012238246 4882 dbSNP
rs552111209 4884 dbSNP
rs1481926051 4888 dbSNP
rs1201342150 4892 dbSNP
rs542205012 4903 dbSNP
rs563867118 4910 dbSNP
rs1459886141 4915 dbSNP
rs770105729 4916 dbSNP
rs1369598447 4917 dbSNP
rs320883 4933 dbSNP
rs1048737210 4938 dbSNP
rs1414396889 4943 dbSNP
rs375531385 4951 dbSNP
rs188285800 4952 dbSNP
rs1249712509 4954 dbSNP
rs1036095471 4957 dbSNP
rs907070758 4959 dbSNP
rs1264835643 4969 dbSNP
rs1242288423 4971 dbSNP
rs1002702281 4973 dbSNP
rs1034688278 4979 dbSNP
rs894357705 4981 dbSNP
rs1348302106 4984 dbSNP
rs1010525861 4989 dbSNP
rs1386879770 4989 dbSNP
rs1392027112 4993 dbSNP
rs565372766 4995 dbSNP
rs1456657773 4997 dbSNP
rs1391298783 5006 dbSNP
rs1160463080 5018 dbSNP
rs1428164603 5020 dbSNP
rs1305392335 5021 dbSNP
rs1472381552 5023 dbSNP
rs1346358983 5026 dbSNP
rs1436117071 5028 dbSNP
rs1273142043 5033 dbSNP
rs1410100685 5037 dbSNP
rs1201052583 5041 dbSNP
rs1021354635 5043 dbSNP
rs79702173 5049 dbSNP
rs73627762 5052 dbSNP
rs1466251215 5053 dbSNP
rs967337604 5058 dbSNP
rs1326605256 5068 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucggucGGUUGAGUGUCACGUCu 5'
                |||:  :: ||||||| 
Target 5' uguugcCCAGGCUGGAGUGCAGu 3'
 		1 - 23
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000352998.3 | 3UTR | UGUUGCCCAGGCUGGAGUGCAGUGGCGCAAUCUCGGCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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