Gene Symbol |
BPNT1
|
Synonyms |
HEL20, PIP |
Description |
3'(2'), 5'-bisphosphate nucleotidase 1 |
Transcript |
NM_006085
|
Expression |
|
Putative miRNA Targets on BPNT1 |
|
3'UTR of BPNT1 (miRNA target sites are highlighted) |
>BPNT1|NM_006085|3'UTR
1 AGGAAAGTTTCATTTGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACT
81 TGAGCTCAGGAGTTTGAGACCAGCCTG GGCAATATCGTGAGACCCCATCTCTACAAAAATACAAATTAACTGGGCATCCT
161 GTCATGCGCCTGTCATCCCAGCTACTTGAGAGGCTGAAGCAGAAGAATCTCTTGAGCCCGGAAGGCAGAGGTTGCAGTGA
241 GCTGAGATCGTGCCACTGCACTCCAGCCTGAGTGACAGGAGTTAAGCCCTGTCTCAGAAAAAAAAAAAACAAAAACCCAA
321 AAAGTACTTAAAGTTTCATTTACTTAGCTAGGAGAAAGACTTGGTTCTCAAAATAATACATTTTAAGATTAATTGGGTAG
401 AATTAGAGTTCCACCTTTATTCATTGTTGAGCAGTGATTTATATTTAGTTATTATATTTAGGAATAGAAAATAGAATTAA
481 ATAATTTAACTTGATTAATCAACCAGACCAATTTTGACGTCTGGAGAACTTATAAACTCAATATGTTATATTTGTTTTCC
561 TGTATTTAGGTGGAGAAATGAGAAAAAGCTTTAGTTCCAATTGACAGTTCAGGTCAATGTTCAATGAACATTCCTATCTT
641 CTAAACCAGATTTCTCTTTTTTTTTCCTGAGACGGAGTCTCGCTCTGTAGCCTAGGCTAGAATGTAGTGGCGTGATCTCG
721 GCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTGCAGGCACCGC
801 CACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGAAGGTGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGA
881 CATCGTGATCTGTCTGCCTCGGACTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCTGGCCTAAACCAGATTT
961 CTTTAGGGCACAATTTTTTCTGGAATCTCACTCTTGTTTTTCACAGTAATTTTAAAAACGTTTCTACTCCAATTAAGAAT
1041 ATATATGATGTTATTATATATGCTTATGAAACAGATTTATGAGAAAAGTTTTTTTTAAATAAATTATTTAATCCTAGCTC
1121 TTTGTTATTCACCAGCTTTTTAAAAAAGTGTTTGAAAATTATACATTCTCGACTTTGGGGATTAGTTTATTCTTGTGGCA
1201 TCATTATAAGGCTTAATTGTGGAAAGCTAAGTACTTGCTTCTATTCCTTCCAATGAGAGATTATAACATAAACTATTAAA
1281 ATTATTCTGCTAATATACCTAGATTTTTATTTTTAGGTCTCTGTCCATTGCTTTTAATTAAAATTATCTGTTTTCAAATC
1361 AA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' ggUAGAAGGA---AGUCGGAg 5'
||: |||| |||||||
Target 5' ccATTCTCCTGCCTCAGCCTc 3'
|
753 - 773
|
156.00 |
-21.90 |
2
|
miRNA 3' gguaGAAG-GAAGUCGGAg 5'
|| | || ||||||
Target 5' gccaCTGCACTCCAGCCTg 3'
|
252 - 270
|
122.00 |
-14.90 |
3
|
miRNA 3' gguagaaggaaGUCGGAg 5'
||||||
Target 5' gagtttgagacCAGCCTg 3'
|
90 - 107
|
120.00 |
-7.80 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|