pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol BPNT1   
Synonyms HEL20, PIP
Description 3'(2'), 5'-bisphosphate nucleotidase 1
Transcript NM_006085   
Expression
Putative miRNA Targets on BPNT1
3'UTR of BPNT1
(miRNA target sites are highlighted)
>BPNT1|NM_006085|3'UTR
   1 AGGAAAGTTTCATTTGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACT
  81 TGAGCTCAGGAGTTTGAGACCAGCCTGGGCAATATCGTGAGACCCCATCTCTACAAAAATACAAATTAACTGGGCATCCT
 161 GTCATGCGCCTGTCATCCCAGCTACTTGAGAGGCTGAAGCAGAAGAATCTCTTGAGCCCGGAAGGCAGAGGTTGCAGTGA
 241 GCTGAGATCGTGCCACTGCACTCCAGCCTGAGTGACAGGAGTTAAGCCCTGTCTCAGAAAAAAAAAAAACAAAAACCCAA
 321 AAAGTACTTAAAGTTTCATTTACTTAGCTAGGAGAAAGACTTGGTTCTCAAAATAATACATTTTAAGATTAATTGGGTAG
 401 AATTAGAGTTCCACCTTTATTCATTGTTGAGCAGTGATTTATATTTAGTTATTATATTTAGGAATAGAAAATAGAATTAA
 481 ATAATTTAACTTGATTAATCAACCAGACCAATTTTGACGTCTGGAGAACTTATAAACTCAATATGTTATATTTGTTTTCC
 561 TGTATTTAGGTGGAGAAATGAGAAAAAGCTTTAGTTCCAATTGACAGTTCAGGTCAATGTTCAATGAACATTCCTATCTT
 641 CTAAACCAGATTTCTCTTTTTTTTTCCTGAGACGGAGTCTCGCTCTGTAGCCTAGGCTAGAATGTAGTGGCGTGATCTCG
 721 GCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTGCAGGCACCGC
 801 CACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGAAGGTGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGA
 881 CATCGTGATCTGTCTGCCTCGGACTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCTGGCCTAAACCAGATTT
 961 CTTTAGGGCACAATTTTTTCTGGAATCTCACTCTTGTTTTTCACAGTAATTTTAAAAACGTTTCTACTCCAATTAAGAAT
1041 ATATATGATGTTATTATATATGCTTATGAAACAGATTTATGAGAAAAGTTTTTTTTAAATAAATTATTTAATCCTAGCTC
1121 TTTGTTATTCACCAGCTTTTTAAAAAAGTGTTTGAAAATTATACATTCTCGACTTTGGGGATTAGTTTATTCTTGTGGCA
1201 TCATTATAAGGCTTAATTGTGGAAAGCTAAGTACTTGCTTCTATTCCTTCCAATGAGAGATTATAACATAAACTATTAAA
1281 ATTATTCTGCTAATATACCTAGATTTTTATTTTTAGGTCTCTGTCCATTGCTTTTAATTAAAATTATCTGTTTTCAAATC
1361 AA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||: ||||   ||||||| 
Target 5' ccATTCTCCTGCCTCAGCCTc 3'
753 - 773 156.00 -21.90
2
miRNA  3' gguaGAAG-GAAGUCGGAg 5'
              || | || |||||| 
Target 5' gccaCTGCACTCCAGCCTg 3'
252 - 270 122.00 -14.90
3
miRNA  3' gguagaaggaaGUCGGAg 5'
                     |||||| 
Target 5' gagtttgagacCAGCCTg 3'
90 - 107 120.00 -7.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26968009 20 COSMIC
COSN2531805 24 COSMIC
COSN26968010 26 COSMIC
COSN30184707 26 COSMIC
COSN30188644 29 COSMIC
COSN2531804 35 COSMIC
COSN26968013 36 COSMIC
COSN28601868 42 COSMIC
COSN28600561 43 COSMIC
COSN30469703 62 COSMIC
COSN30187816 66 COSMIC
COSN30176412 68 COSMIC
COSN30176425 69 COSMIC
COSN30191799 73 COSMIC
COSN30147429 82 COSMIC
COSN32052803 85 COSMIC
COSN31495477 87 COSMIC
COSN30188302 109 COSMIC
COSN30121845 116 COSMIC
COSN30174810 127 COSMIC
COSN17589962 327 COSMIC
COSN31576829 501 COSMIC
COSN7985615 589 COSMIC
COSN31513410 611 COSMIC
COSN22531543 636 COSMIC
COSN31491214 656 COSMIC
COSN30544303 673 COSMIC
COSN30138156 681 COSMIC
COSN31608110 719 COSMIC
COSN23865864 720 COSMIC
COSN17882590 769 COSMIC
COSN31518846 798 COSMIC
COSN28851455 817 COSMIC
COSN31570351 818 COSMIC
COSN13517668 850 COSMIC
COSN8637523 877 COSMIC
COSN4901688 903 COSMIC
COSN28596744 911 COSMIC
COSN28592850 923 COSMIC
COSN30138393 934 COSMIC
COSN30133556 946 COSMIC
COSN30123700 961 COSMIC
COSN1079526 1005 COSMIC
COSN26856075 1005 COSMIC
COSN26640489 1027 COSMIC
COSN28015694 1056 COSMIC
COSN31588342 1088 COSMIC
COSN30669674 1089 COSMIC
COSN31578643 1096 COSMIC
COSN30748961 1097 COSMIC
COSN30526771 1166 COSMIC
COSN17076130 1267 COSMIC
COSN30003669 1294 COSMIC
SNPs in gene 3'UTRs
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Mutant ID Mutant Position Mutant Source
rs1472504110 2 dbSNP
rs1168620898 5 dbSNP
rs766583037 11 dbSNP
rs760935868 14 dbSNP
rs773243841 16 dbSNP
rs377756485 19 dbSNP
rs200261599 20 dbSNP
rs369302608 23 dbSNP
rs376028003 24 dbSNP
rs201182970 25 dbSNP
rs770688363 26 dbSNP
rs1431815979 34 dbSNP
rs1372238489 35 dbSNP
rs746702006 40 dbSNP
rs1478783523 41 dbSNP
rs3201546 42 dbSNP
rs1137752 43 dbSNP
rs1187379124 47 dbSNP
rs547687388 52 dbSNP
rs1227509864 54 dbSNP
rs1008921595 55 dbSNP
rs977032955 56 dbSNP
rs1198582401 57 dbSNP
rs1254315327 63 dbSNP
rs1442104148 64 dbSNP
rs892687669 84 dbSNP
rs965735232 87 dbSNP
rs1249927310 90 dbSNP
rs1019067280 91 dbSNP
rs1007230121 92 dbSNP
rs1052558134 98 dbSNP
rs1032736267 102 dbSNP
rs1171241264 104 dbSNP
rs999962720 105 dbSNP
rs139069201 108 dbSNP
rs1041602535 116 dbSNP
rs545586760 117 dbSNP
rs1045159805 120 dbSNP
rs948147707 121 dbSNP
rs151145168 124 dbSNP
rs895812975 129 dbSNP
rs1137753 133 dbSNP
rs917935310 143 dbSNP
rs1230756280 144 dbSNP
rs1255158061 151 dbSNP
rs1351163690 155 dbSNP
rs182803021 159 dbSNP
rs1270258011 165 dbSNP
rs909926178 167 dbSNP
rs563299997 168 dbSNP
rs907760252 170 dbSNP
rs562956835 173 dbSNP
rs1268640885 175 dbSNP
rs1435465384 179 dbSNP
rs866242005 183 dbSNP
rs1440661249 191 dbSNP
rs1345277897 194 dbSNP
rs1377374063 202 dbSNP
rs930117631 203 dbSNP
rs984625940 219 dbSNP
rs951899889 220 dbSNP
rs1456232454 225 dbSNP
rs3201549 227 dbSNP
rs142081812 230 dbSNP
rs577132448 247 dbSNP
rs965807043 249 dbSNP
rs1019037872 250 dbSNP
rs1166224482 273 dbSNP
rs1032704933 291 dbSNP
rs1436859257 295 dbSNP
rs1395895811 296 dbSNP
rs79215132 297 dbSNP
rs1452346260 298 dbSNP
rs75954249 298 dbSNP
rs879005460 299 dbSNP
rs892721419 300 dbSNP
rs540258049 304 dbSNP
rs1001063939 307 dbSNP
rs1489518339 308 dbSNP
rs574776601 309 dbSNP
rs1020112958 310 dbSNP
rs554882925 310 dbSNP
rs895686913 310 dbSNP
rs1437161076 311 dbSNP
rs1165071843 312 dbSNP
rs1369634330 313 dbSNP
rs568999203 319 dbSNP
rs948152990 327 dbSNP
rs1055726787 330 dbSNP
rs754749719 338 dbSNP
rs1247858621 350 dbSNP
rs937313449 352 dbSNP
rs1411404056 353 dbSNP
rs79236937 355 dbSNP
rs1056876318 357 dbSNP
rs1349682713 358 dbSNP
rs1227962279 360 dbSNP
rs1048504145 364 dbSNP
rs575759772 374 dbSNP