pre-miRNA Information
pre-miRNA hsa-mir-1303   
Genomic Coordinates chr5: 154685776 - 154685861
Synonyms MIRN1303, hsa-mir-1303, MIR1303
Description Homo sapiens miR-1303 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-1303
Sequence 52| UUUAGAGACGGGGUCUUGCUCU |73
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 5 + 154685830 23291724, 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs370437195 6 dbSNP
rs1195001383 7 dbSNP
rs546614687 8 dbSNP
rs762579883 9 dbSNP
rs766041486 10 dbSNP
rs751079975 12 dbSNP
rs888516744 13 dbSNP
rs566454487 14 dbSNP
rs766973220 15 dbSNP
rs1474274822 17 dbSNP
rs753222192 18 dbSNP
rs1230907999 19 dbSNP
rs756552638 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MAP4K2   
Synonyms BL44, GCK, RAB8IP
Description mitogen-activated protein kinase kinase kinase kinase 2
Transcript NM_004579   
Expression
Putative miRNA Targets on MAP4K2
3'UTR of MAP4K2
(miRNA target sites are highlighted)
>MAP4K2|NM_004579|3'UTR
   1 GAGCAGCGGGCCTGTCCAGGGGCTCCCCGCCCCACCCCACGCCTTAGCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCT
  81 AGACCAGAGGAGCCCAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCTGGGGAG
 161 GGAGGGGAGCCCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATCCCCGAGGCAGCCCAGT
 241 CCCTAGTGCCCAAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTTCTACTCTTTCTGCC
 321 AAGAGCCTGCCCCTGCATTTGTCCTGGGAAACACGGTATTTAAGAGAGAACTATATTGGTATTAAAGCTGGTTTGTTTTA
 401 GTCCTCTGGTCCCTCTGGGTAGGGGGAGTGAACCCAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucucGUUCUGGGGCAGAGAUuu 5'
              | | |:::| |:||||  
Target 5' tgttCCACATTTCCTTTCTAct 3'
290 - 311 118.00 -7.00
2
miRNA  3' ucUCGUUCUGGGGCAGAGAUUu 5'
            :|||  :||| ||| |||: 
Target 5' gaGGCA--GCCCAGTCCCTAGt 3'
228 - 247 116.00 -14.10
3
miRNA  3' ucuCGUUCUGGGGCAGAGAUUu 5'
             | :| || | || |:||| 
Target 5' cctGGGAAACACGGTATTTAAg 3'
343 - 364 111.00 -6.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31591473 10 COSMIC
COSN28851037 28 COSMIC
COSN30528532 53 COSMIC
COSN26345053 101 COSMIC
COSN31778855 174 COSMIC
COSN31488626 220 COSMIC
COSN31554869 264 COSMIC
COSN30164384 294 COSMIC
COSN16443882 448 COSMIC
COSN5263024 538 COSMIC
COSN8282653 878 COSMIC
COSN24974231 1680 COSMIC
COSN22824364 2139 COSMIC
COSN27144928 2286 COSMIC
COSN7016885 2323 COSMIC
COSN8687754 2510 COSMIC
COSN23902708 2623 COSMIC
COSN21237525 2960 COSMIC
COSN24551512 2964 COSMIC
COSN21209821 2997 COSMIC
COSN7016884 3000 COSMIC
COSN5828546 3340 COSMIC
COSN15789510 3383 COSMIC
COSN7016883 3385 COSMIC
COSN21408133 4307 COSMIC
COSN7016882 4308 COSMIC
COSN7016881 4405 COSMIC
rs117925626 892 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1344029800 2 dbSNP
rs751416356 7 dbSNP
rs777686791 8 dbSNP
rs758340406 10 dbSNP
rs752149077 12 dbSNP
rs1160630306 13 dbSNP
rs1463703502 14 dbSNP
rs370427980 18 dbSNP
rs1176019682 19 dbSNP
rs759188754 24 dbSNP
rs753402982 25 dbSNP
rs565546034 28 dbSNP
rs900750990 29 dbSNP
rs1247775529 30 dbSNP
rs1196979567 35 dbSNP
rs1480689150 36 dbSNP
rs1254979055 39 dbSNP
rs762069053 40 dbSNP
rs1208329573 41 dbSNP
rs545430774 41 dbSNP
rs769218032 44 dbSNP
rs1224628295 45 dbSNP
rs1335737945 48 dbSNP
rs943701945 54 dbSNP
rs912234591 55 dbSNP
rs1047220684 59 dbSNP
rs1415655869 63 dbSNP
rs929728164 66 dbSNP
rs963738214 69 dbSNP
rs1436283011 72 dbSNP
rs576550210 73 dbSNP
rs1458668143 78 dbSNP
rs1325223916 90 dbSNP
rs973887189 99 dbSNP
rs1007690214 103 dbSNP
rs2229721 109 dbSNP
rs1197524489 110 dbSNP
rs1052018396 111 dbSNP
rs536377951 114 dbSNP
rs1336201402 116 dbSNP
rs1330016559 119 dbSNP
rs916497259 120 dbSNP
rs992090908 125 dbSNP
rs1291633551 129 dbSNP
rs1249617110 130 dbSNP
rs1445242443 137 dbSNP
rs960956881 153 dbSNP
rs1031013571 164 dbSNP
rs1192434326 166 dbSNP
rs1247193836 168 dbSNP
rs1478759287 170 dbSNP
rs993772257 174 dbSNP
rs1354724275 175 dbSNP
rs1284052176 176 dbSNP
rs749172948 177 dbSNP
rs1241524193 178 dbSNP
rs1161859236 179 dbSNP
rs3180513 182 dbSNP
rs1379833177 186 dbSNP
rs770016357 187 dbSNP
rs1400465618 194 dbSNP
rs1037676639 197 dbSNP
rs1333329832 199 dbSNP
rs747776089 199 dbSNP
rs574054455 201 dbSNP
rs1282663111 202 dbSNP
rs1351366408 207 dbSNP
rs1230420522 209 dbSNP
rs554488240 211 dbSNP
rs942028399 215 dbSNP
rs1204320114 217 dbSNP
rs996294384 219 dbSNP
rs900720047 225 dbSNP
rs1040990215 227 dbSNP
rs1267508801 228 dbSNP
rs1472613229 235 dbSNP
rs1183957811 242 dbSNP
rs1361689929 254 dbSNP
rs1350661374 255 dbSNP
rs1164131376 266 dbSNP
rs868042219 268 dbSNP
rs890760822 275 dbSNP
rs1302671288 281 dbSNP
rs534781404 284 dbSNP
rs1411717457 304 dbSNP
rs1335397460 316 dbSNP
rs929654648 322 dbSNP
rs112747982 323 dbSNP
rs1284520683 324 dbSNP
rs898239524 329 dbSNP
rs565645345 331 dbSNP
rs1290917436 334 dbSNP
rs1061125 353 dbSNP
rs1483129751 354 dbSNP
rs1197029227 355 dbSNP
rs1441452623 359 dbSNP
rs1436808618 369 dbSNP
rs988059298 373 dbSNP
rs956652035 378 dbSNP
rs1177436394 385 dbSNP
rs925218812 387 dbSNP
rs947829345 393 dbSNP
rs545520413 403 dbSNP
rs1248051448 404 dbSNP
rs1396780037 406 dbSNP
rs552004831 414 dbSNP
rs1018014375 415 dbSNP
rs1384785518 417 dbSNP
rs1008430574 425 dbSNP
rs1342700789 426 dbSNP
rs1218928639 427 dbSNP
rs954881514 428 dbSNP
rs1338381929 437 dbSNP
rs1450171516 441 dbSNP
rs1200715235 446 dbSNP
rs1244579087 447 dbSNP
rs1289598640 448 dbSNP
rs538543560 448 dbSNP
rs1183365474 450 dbSNP
rs569353604 460 dbSNP
rs1030944903 464 dbSNP
rs549734452 468 dbSNP
rs747577766 469 dbSNP
rs113751176 471 dbSNP
rs1356428559 473 dbSNP
rs1307776916 474 dbSNP
rs898056340 479 dbSNP
rs1174592257 491 dbSNP
rs1037960632 495 dbSNP
rs1450186967 498 dbSNP
rs1335773891 500 dbSNP
rs1365870587 504 dbSNP
rs939301707 516 dbSNP
rs1383810722 522 dbSNP
rs923878392 525 dbSNP
rs529781497 536 dbSNP
rs978050799 543 dbSNP
rs1306468761 546 dbSNP
rs199655584 553 dbSNP
rs1006191749 556 dbSNP
rs1264694896 557 dbSNP
rs1368438821 560 dbSNP
rs905226389 565 dbSNP
rs1045153768 566 dbSNP
rs1487033960 570 dbSNP
rs1185332386 573 dbSNP
rs777795417 581 dbSNP
rs1433911056 588 dbSNP
rs1434598428 589 dbSNP
rs750159158 598 dbSNP
rs1427475051 603 dbSNP
rs781112274 604 dbSNP
rs968056750 614 dbSNP
rs576866409 619 dbSNP
rs925165755 624 dbSNP
rs979349085 639 dbSNP
rs1358524646 646 dbSNP
rs375708361 660 dbSNP
rs1158002847 663 dbSNP
rs963676955 665 dbSNP
rs1361183911 666 dbSNP
rs1386852843 670 dbSNP
rs910900858 680 dbSNP
rs986553079 683 dbSNP
rs752810493 686 dbSNP
rs964816881 690 dbSNP
rs1019127367 693 dbSNP
rs1009500491 706 dbSNP
rs1224849641 710 dbSNP
rs116564679 711 dbSNP
rs1480133178 725 dbSNP
rs191112937 730 dbSNP
rs993830579 733 dbSNP
rs1477488951 734 dbSNP
rs1016517985 736 dbSNP
rs1420727223 747 dbSNP
rs527848843 761 dbSNP
rs1156589996 764 dbSNP
rs1344551759 773 dbSNP
rs1425175042 775 dbSNP
rs898164591 782 dbSNP
rs1363218857 786 dbSNP
rs1038091820 788 dbSNP
rs1217777590 792 dbSNP
rs1403780067 796 dbSNP
rs1279839820 800 dbSNP
rs947798182 811 dbSNP
rs1222436051 815 dbSNP
rs565474424 823 dbSNP
rs1322888713 826 dbSNP
rs755796812 827 dbSNP
rs939211314 829 dbSNP
rs1490223875 830 dbSNP
rs1205956867 833 dbSNP
rs1216529022 847 dbSNP
rs1312790634 866 dbSNP
rs896521725 866 dbSNP
rs923874522 874 dbSNP
rs1280811582 877 dbSNP
rs1444992253 881 dbSNP
rs117925626 892 dbSNP
rs1383295893 899 dbSNP
rs1367137370 913 dbSNP
rs946681749 914 dbSNP
rs903722347 916 dbSNP
rs1434552013 928 dbSNP
rs1439522645 928 dbSNP
rs576790355 931 dbSNP
rs915252861 936 dbSNP
rs974772217 938 dbSNP
rs1297438778 945 dbSNP
rs1466472377 947 dbSNP
rs911149822 948 dbSNP
rs1173303793 949 dbSNP
rs986833225 959 dbSNP
rs1275150550 970 dbSNP
rs964804826 975 dbSNP
rs1204148671 982 dbSNP
rs1238251966 987 dbSNP
rs1413458598 988 dbSNP
rs1185130949 992 dbSNP
rs1423831408 993 dbSNP
rs1241212535 1001 dbSNP
rs1195440770 1009 dbSNP
rs9326434 1012 dbSNP
rs1261499254 1019 dbSNP
rs1193470488 1025 dbSNP
rs111762410 1031 dbSNP
rs1483865094 1038 dbSNP
rs1407693852 1046 dbSNP
rs1169379115 1050 dbSNP
rs542979386 1053 dbSNP
rs768390930 1053 dbSNP
rs950986878 1054 dbSNP
rs1026526990 1055 dbSNP
rs1432063934 1059 dbSNP
rs1423501303 1060 dbSNP
rs574066084 1063 dbSNP
rs1360022960 1073 dbSNP
rs554196869 1075 dbSNP
rs1214054755 1076 dbSNP
rs534519466 1077 dbSNP
rs898133554 1078 dbSNP
rs1311704894 1079 dbSNP
rs761812065 1080 dbSNP
rs1016480212 1083 dbSNP
rs985032699 1087 dbSNP
rs1011942996 1089 dbSNP
rs1193874650 1095 dbSNP
rs1243763143 1099 dbSNP
rs894881910 1103 dbSNP
rs571957698 1104 dbSNP
rs1277324377 1106 dbSNP
rs1429578498 1108 dbSNP
rs1396430645 1111 dbSNP
rs1023890198 1112 dbSNP
rs1381225384 1118 dbSNP
rs558322284 1131 dbSNP
rs902348617 1132 dbSNP
rs538582975 1137 dbSNP
rs1320924654 1138 dbSNP
rs1400398824 1143 dbSNP
rs946651633 1144 dbSNP
rs751598105 1145 dbSNP
rs569594070 1146 dbSNP
rs1170156696 1148 dbSNP
rs555910676 1150 dbSNP
rs536212802 1168 dbSNP
rs1043507922 1173 dbSNP
rs1180660468 1178 dbSNP
rs942552164 1179 dbSNP
rs1460880706 1184 dbSNP
rs9326433 1193 dbSNP
rs1445156852 1204 dbSNP
rs547424572 1206 dbSNP
rs1268932514 1216 dbSNP
rs987962669 1217 dbSNP
rs1196907902 1218 dbSNP
rs1428157509 1219 dbSNP
rs1051035001 1220 dbSNP
rs1200671853 1223 dbSNP
rs1456587077 1224 dbSNP
rs933638625 1226 dbSNP
rs1257720315 1229 dbSNP
rs1245183610 1231 dbSNP
rs1323315509 1232 dbSNP
rs1367583444 1233 dbSNP
rs1403169009 1237 dbSNP
rs1310408578 1238 dbSNP
rs1227686863 1239 dbSNP
rs918279233 1242 dbSNP
rs1377630664 1243 dbSNP
rs1332787750 1250 dbSNP
rs950878692 1256 dbSNP
rs919437898 1257 dbSNP
rs941122789 1258 dbSNP
rs1293776835 1259 dbSNP
rs1239390128 1263 dbSNP
rs1458699388 1266 dbSNP
rs973627485 1267 dbSNP
rs1219530223 1268 dbSNP
rs1163185859 1269 dbSNP
rs963604756 1272 dbSNP
rs1437997000 1279 dbSNP
rs527369447 1281 dbSNP
rs985322524 1283 dbSNP
rs1469926325 1284 dbSNP
rs1444553501 1285 dbSNP
rs1381515723 1289 dbSNP
rs1164843670 1293 dbSNP
rs1180563041 1299 dbSNP
rs1387627321 1303 dbSNP
rs1456518568 1311 dbSNP
rs969600317 1313 dbSNP
rs1397513775 1314 dbSNP
rs1393325395 1315 dbSNP
rs1179503703 1323 dbSNP
rs1445764705 1324 dbSNP
rs1023251101 1329 dbSNP
rs1250032847 1334 dbSNP
rs1361431046 1343 dbSNP
rs1011907776 1344 dbSNP
rs571902020 1345 dbSNP
rs959339239 1352 dbSNP
rs1263445183 1358 dbSNP
rs1457652399 1359 dbSNP
rs1220644340 1360 dbSNP
rs1354290972 1363 dbSNP
rs1245529082 1367 dbSNP
rs1311440333 1373 dbSNP
rs1443274308 1375 dbSNP
rs1034738002 1376 dbSNP
rs375130008 1385 dbSNP
rs1237267922 1386 dbSNP
rs1373763446 1400 dbSNP
rs960991570 1409 dbSNP
rs1375562486 1423 dbSNP
rs1003713543 1440 dbSNP
rs1301457579 1446 dbSNP
rs1395952920 1447 dbSNP
rs1388135134 1452 dbSNP
rs1470788301 1460 dbSNP
rs1388212272 1464 dbSNP
rs1337090867 1465 dbSNP
rs1384944345 1466 dbSNP
rs1030997393 1470 dbSNP
rs902317094 1471 dbSNP
rs1326563421 1475 dbSNP
rs1292112007 1479 dbSNP
rs999492067 1481 dbSNP
rs1042222909 1482 dbSNP
rs77450770 1487 dbSNP
rs374685482 1488 dbSNP
rs1437831796 1504 dbSNP
rs1363316715 1505 dbSNP
rs1007107737 1508 dbSNP
rs1263033182 1509 dbSNP
rs889656360 1510 dbSNP
rs1199748034 1515 dbSNP
rs368061946 1528 dbSNP
rs1423204144 1536 dbSNP
rs1038964532 1540 dbSNP
rs943343378 1546 dbSNP
rs1408086802 1548 dbSNP
rs1468025337 1549 dbSNP
rs911888334 1551 dbSNP
rs1051827055 1554 dbSNP
rs929399033 1556 dbSNP
rs1292762963 1558 dbSNP
rs1223793560 1560 dbSNP
rs1339480780 1560 dbSNP
rs1284785577 1561 dbSNP
rs1488509785 1563 dbSNP
rs1321931649 1564 dbSNP
rs919363854 1573 dbSNP
rs1261833130 1582 dbSNP
rs909607045 1591 dbSNP
rs774936506 1592 dbSNP
rs963574205 1600 dbSNP
rs1262616378 1603 dbSNP
rs1490527249 1605 dbSNP
rs187191961 1609 dbSNP
rs529239129 1627 dbSNP
rs1427455036 1635 dbSNP
rs1431235061 1645 dbSNP
rs1328972825 1646 dbSNP
rs948204025 1665 dbSNP
rs916164053 1668 dbSNP
rs1455248944 1672 dbSNP
rs1296239454 1678 dbSNP
rs769497039 1679 dbSNP
rs916796093 1688 dbSNP
rs1343187073 1693 dbSNP
rs1219026332 1697 dbSNP
rs1300191663 1699 dbSNP
rs959038196 1702 dbSNP
rs992813386 1705 dbSNP
rs373204335 1713 dbSNP
rs560282644 1719 dbSNP
rs960912447 1720 dbSNP
rs375376898 1724 dbSNP
rs140297619 1725 dbSNP
rs1003273066 1726 dbSNP
rs1300523610 1730 dbSNP
rs1490553218 1730 dbSNP
rs1224724792 1738 dbSNP
rs537461805 1747 dbSNP
rs1488251898 1748 dbSNP
rs1190439871 1749 dbSNP
rs968035360 1752 dbSNP
rs1020692296 1757 dbSNP
rs553806650 1758 dbSNP
rs1173203569 1759 dbSNP
rs1156844800 1767 dbSNP
rs1379614860 1774 dbSNP
rs1467692714 1778 dbSNP
rs1164878332 1786 dbSNP
rs1010690426 1789 dbSNP
rs1298369584 1791 dbSNP
rs1176023409 1796 dbSNP
rs1390025315 1797 dbSNP
rs558358866 1798 dbSNP
rs112277411 1799 dbSNP
rs1248290052 1806 dbSNP
rs1289634318 1812 dbSNP
rs1017514868 1815 dbSNP
rs1006997921 1822 dbSNP
rs1007918864 1823 dbSNP
rs954010125 1835 dbSNP
rs544777161 1836 dbSNP
rs1191316327 1838 dbSNP
rs779408303 1841 dbSNP
rs1446321639 1848 dbSNP
rs1029530724 1857 dbSNP
rs1256832363 1865 dbSNP
rs998434033 1866 dbSNP
rs1282036393 1869 dbSNP
rs576277095 1874 dbSNP
rs897033896 1875 dbSNP
rs1170787608 1877 dbSNP
rs1355851933 1884 dbSNP
rs1464404578 1886 dbSNP
rs556384472 1897 dbSNP
rs1331041320 1903 dbSNP
rs1384225051 1905 dbSNP
rs1036967156 1912 dbSNP
rs777053386 1916 dbSNP
rs890444560 1920 dbSNP
rs1052176216 1926 dbSNP
rs1215240319 1929 dbSNP
rs1262047921 1930 dbSNP
rs929336348 1931 dbSNP
rs182907263 1936 dbSNP
rs771328586 1937 dbSNP
rs567292701 1950 dbSNP
rs567398544 1951 dbSNP
rs916114910 1953 dbSNP
rs1280488737 1955 dbSNP
rs533658753 1962 dbSNP
rs114510091 1966 dbSNP
rs1326335733 1967 dbSNP
rs938953303 1974 dbSNP
rs1335478647 1980 dbSNP
rs372131314 1981 dbSNP
rs1472180838 1985 dbSNP
rs1186534446 1986 dbSNP
rs916995382 1996 dbSNP
rs982153198 1999 dbSNP
rs966353489 2000 dbSNP
rs1407364620 2001 dbSNP
rs1397823686 2003 dbSNP
rs1020661008 2017 dbSNP
rs1332848930 2022 dbSNP
rs989225740 2027 dbSNP
rs1431593570 2039 dbSNP
rs1175902657 2042 dbSNP
rs1271958503 2043 dbSNP
rs1338477126 2045 dbSNP
rs1056599035 2049 dbSNP
rs571333925 2050 dbSNP
rs886176136 2057 dbSNP
rs866063458 2061 dbSNP
rs978343143 2065 dbSNP
rs1368942644 2070 dbSNP
rs946701272 2071 dbSNP
rs1215926352 2081 dbSNP
rs1017879901 2084 dbSNP
rs915284736 2085 dbSNP
rs747495871 2089 dbSNP
rs1487010628 2103 dbSNP
rs1192564052 2104 dbSNP
rs1429552935 2117 dbSNP
rs1007411687 2123 dbSNP
rs985940336 2129 dbSNP
rs954120828 2137 dbSNP
rs370912287 2139 dbSNP
rs1425116978 2141 dbSNP
rs890341083 2143 dbSNP
rs1320820657 2144 dbSNP
rs1241972498 2145 dbSNP
rs1030256610 2146 dbSNP
rs552019296 2148 dbSNP
rs778278342 2151 dbSNP
rs897866898 2152 dbSNP
rs1005514154 2159 dbSNP
rs1272816774 2160 dbSNP
rs569904239 2161 dbSNP
rs1343993182 2178 dbSNP
rs531900329 2182 dbSNP
rs569452138 2190 dbSNP
rs942120149 2191 dbSNP
rs1350958314 2197 dbSNP
rs1022597633 2198 dbSNP
rs1013001445 2199 dbSNP
rs549695633 2202 dbSNP
rs1056341950 2214 dbSNP
rs529552319 2219 dbSNP
rs1160869731 2220 dbSNP
rs1378934234 2222 dbSNP
rs1419185896 2230 dbSNP
rs928843856 2235 dbSNP
rs1285237013 2245 dbSNP
rs977743195 2256 dbSNP
rs367549934 2257 dbSNP
rs1323117049 2260 dbSNP
rs560570529 2261 dbSNP
rs913600496 2262 dbSNP
rs1311382464 2265 dbSNP
rs1374500716 2266 dbSNP
rs1238825295 2272 dbSNP
rs1336124589 2273 dbSNP
rs1373996390 2273 dbSNP
rs1207756274 2274 dbSNP
rs1447671344 2276 dbSNP
rs1011479711 2277 dbSNP
rs1438756973 2278 dbSNP
rs1402661405 2282 dbSNP
rs989173361 2286 dbSNP
rs1439579014 2287 dbSNP
rs540211464 2292 dbSNP
rs1391202437 2294 dbSNP
rs1164840020 2298 dbSNP
rs1387214683 2301 dbSNP
rs192029758 2305 dbSNP
rs564210211 2306 dbSNP
rs957760793 2308 dbSNP
rs1178691137 2309 dbSNP
rs1397474815 2310 dbSNP
rs1410378931 2317 dbSNP
rs910316104 2318 dbSNP
rs1398069932 2325 dbSNP
rs1445987466 2334 dbSNP
rs772101280 2335 dbSNP
rs986334735 2340 dbSNP
rs1235938903 2343 dbSNP
rs1203384986 2344 dbSNP
rs1437552829 2351 dbSNP
rs1339634088 2357 dbSNP
rs1256594733 2358 dbSNP
rs796817461 2358 dbSNP
rs188444163 2359 dbSNP
rs1204878028 2361 dbSNP
rs748265969 2362 dbSNP
rs568083983 2367 dbSNP
rs1422203107 2369 dbSNP
rs1212045432 2370 dbSNP
rs1373901588 2376 dbSNP
rs1357894470 2382 dbSNP
rs1168737794 2383 dbSNP
rs1287603388 2385 dbSNP
rs1397869525 2390 dbSNP
rs1464851359 2393 dbSNP
rs1337389623 2404 dbSNP
rs146690705 2422 dbSNP
rs1240910031 2423 dbSNP
rs1379214755 2432 dbSNP
rs1277943347 2434 dbSNP
rs377685089 2446 dbSNP
rs962024229 2447 dbSNP
rs1326463700 2451 dbSNP
rs1016295049 2452 dbSNP
rs1275849528 2456 dbSNP
rs893032852 2457 dbSNP
rs1350753014 2468 dbSNP
rs1325247588 2469 dbSNP
rs1422570299 2475 dbSNP
rs1482548555 2484 dbSNP
rs183561180 2485 dbSNP
rs1361059019 2489 dbSNP
rs1420918620 2491 dbSNP
rs542940433 2492 dbSNP
rs72156300 2492 dbSNP
rs1477407620 2502 dbSNP
rs1491136381 2503 dbSNP
rs1171880862 2504 dbSNP
rs1357436285 2504 dbSNP
rs1385068093 2504 dbSNP
rs1491519958 2504 dbSNP
rs397745278 2504 dbSNP
rs56139846 2504 dbSNP
rs1478151430 2505 dbSNP
rs1006242322 2507 dbSNP
rs1303817385 2508 dbSNP
rs573830005 2508 dbSNP
rs1233182125 2511 dbSNP
rs1055889128 2512 dbSNP
rs1214525904 2514 dbSNP
rs1262803699 2514 dbSNP
rs1356032956 2514 dbSNP
rs553821830 2514 dbSNP
rs985438141 2514 dbSNP
rs191978141 2515 dbSNP
rs1175275978 2516 dbSNP
rs1380835913 2517 dbSNP
rs1041940590 2519 dbSNP
rs1156279593 2525 dbSNP
rs141164828 2525 dbSNP
rs1458120936 2525 dbSNP
rs922681106 2525 dbSNP
rs1365939647 2527 dbSNP
rs1386564080 2536 dbSNP
rs946326278 2537 dbSNP
rs1308413594 2541 dbSNP
rs577821036 2551 dbSNP
rs1379736729 2552 dbSNP
rs914844470 2555 dbSNP
rs1285441209 2557 dbSNP
rs1360195777 2558 dbSNP
rs1224067302 2570 dbSNP
rs1263835894 2570 dbSNP
rs1356537126 2574 dbSNP
rs1190395709 2581 dbSNP
rs961180233 2583 dbSNP
rs1441430849 2589 dbSNP
rs1015471981 2591 dbSNP
rs1379175603 2596 dbSNP
rs1053355923 2597 dbSNP
rs186305193 2598 dbSNP
rs1276854865 2604 dbSNP
rs1402831203 2608 dbSNP
rs1344646148 2610 dbSNP
rs1457763560 2614 dbSNP
rs1332426687 2615 dbSNP
rs550872751 2623 dbSNP
rs1012556148 2624 dbSNP
rs201528411 2624 dbSNP
rs985937743 2624 dbSNP
rs537935346 2630 dbSNP
rs1196684824 2637 dbSNP
rs1220600869 2637 dbSNP
rs1458884007 2637 dbSNP
rs5792334 2637 dbSNP
rs1237493849 2640 dbSNP
rs1472876240 2644 dbSNP
rs1035385057 2646 dbSNP
rs1343434473 2652 dbSNP
rs1411238048 2655 dbSNP
rs1422913620 2663 dbSNP
rs1170888513 2667 dbSNP
rs1426251707 2671 dbSNP
rs998601403 2685 dbSNP
rs574267535 2687 dbSNP
rs763158535 2690 dbSNP
rs954692752 2695 dbSNP
rs1414561849 2697 dbSNP
rs1301132044 2703 dbSNP
rs569475476 2705 dbSNP
rs1042499364 2706 dbSNP
rs1280270706 2712 dbSNP
rs923156514 2716 dbSNP
rs1479627232 2723 dbSNP
rs1257401239 2739 dbSNP
rs946887748 2741 dbSNP
rs549296436 2742 dbSNP
rs1050442886 2748 dbSNP
rs879478945 2761 dbSNP
rs922614947 2762 dbSNP
rs1194930790 2765 dbSNP
rs1407902750 2765 dbSNP
rs1016200410 2774 dbSNP
rs1006189876 2777 dbSNP
rs958775901 2779 dbSNP
rs181030821 2780 dbSNP
rs1416681167 2789 dbSNP
rs1002990545 2804 dbSNP
rs1280920934 2811 dbSNP
rs908632345 2815 dbSNP
rs983933062 2818 dbSNP
rs752865200 2819 dbSNP
rs1041847210 2827 dbSNP
rs754047856 2843 dbSNP
rs567025186 2844 dbSNP
rs1220887893 2845 dbSNP
rs1276336878 2847 dbSNP
rs546605138 2859 dbSNP
rs991838332 2860 dbSNP
rs959731313 2861 dbSNP
rs1487085260 2866 dbSNP
rs893355996 2868 dbSNP
rs1247676698 2870 dbSNP
rs868446629 2886 dbSNP
rs998485135 2891 dbSNP
rs1189982580 2903 dbSNP
rs1425071295 2904 dbSNP
rs533119422 2912 dbSNP
rs1420441755 2917 dbSNP
rs1054638357 2929 dbSNP
rs1324384249 2930 dbSNP
rs1358661620 2930 dbSNP
rs1448036394 2930 dbSNP
rs564245954 2934 dbSNP
rs1331478345 2942 dbSNP
rs1438342785 2944 dbSNP
rs189832606 2955 dbSNP
rs781111139 2956 dbSNP
rs1334187227 2959 dbSNP
rs1011044393 2964 dbSNP
rs893993687 2965 dbSNP
rs1049988671 2966 dbSNP
rs910252426 2967 dbSNP
rs1050585205 2969 dbSNP
rs1041029913 2970 dbSNP
rs1246683303 2972 dbSNP
rs940022835 2972 dbSNP
rs908601222 2981 dbSNP
rs1378564189 2994 dbSNP
rs1439093803 2994 dbSNP
rs933107612 2997 dbSNP
rs1171806123 2998 dbSNP
rs923030888 2999 dbSNP
rs757139009 3005 dbSNP
rs971860737 3006 dbSNP
rs1417945439 3012 dbSNP
rs915769375 3017 dbSNP
rs991414456 3018 dbSNP
rs374428057 3023 dbSNP
rs960194238 3030 dbSNP
rs879672534 3031 dbSNP
rs928558058 3034 dbSNP
rs1357995462 3035 dbSNP
rs1483587783 3037 dbSNP
rs1239274925 3038 dbSNP
rs562729095 3044 dbSNP
rs1461017221 3046 dbSNP
rs1236878178 3047 dbSNP
rs371287826 3051 dbSNP
rs1021315396 3054 dbSNP
rs984741954 3055 dbSNP
rs1471951024 3066 dbSNP
rs958226554 3069 dbSNP
rs752234436 3071 dbSNP
rs1034378828 3072 dbSNP
rs1333358004 3073 dbSNP
rs1398005555 3075 dbSNP
rs573891532 3079 dbSNP
rs1028941424 3087 dbSNP
rs1381330137 3089 dbSNP
rs981869422 3091 dbSNP
rs1242181823 3108 dbSNP
rs1312241106 3112 dbSNP
rs1292221318 3117 dbSNP
rs1319117280 3124 dbSNP
rs1451341561 3130 dbSNP
rs1220838531 3140 dbSNP
rs1256770266 3142 dbSNP
rs971477459 3144 dbSNP
rs1339267213 3151 dbSNP
rs1400513401 3154 dbSNP
rs1201485607 3159 dbSNP
rs901403582 3160 dbSNP
rs1440713113 3172 dbSNP
rs1332989727 3174 dbSNP
rs1020334050 3180 dbSNP
rs1010321023 3182 dbSNP
rs893344516 3184 dbSNP
rs1033215886 3187 dbSNP
rs560447719 3188 dbSNP
rs540235875 3190 dbSNP
rs1421159608 3192 dbSNP
rs1461443229 3200 dbSNP
rs1048471830 3201 dbSNP
rs532239045 3204 dbSNP
rs1393786997 3211 dbSNP
rs1311955041 3213 dbSNP
rs1340722397 3219 dbSNP
rs764716668 3226 dbSNP
rs1170264965 3228 dbSNP
rs932992794 3242 dbSNP
rs901557471 3248 dbSNP
rs1234621417 3257 dbSNP
rs1258212862 3257 dbSNP
rs894567597 3261 dbSNP
rs1210233812 3262 dbSNP
rs1287066191 3263 dbSNP
rs1424901753 3270 dbSNP
rs1036114683 3274 dbSNP
rs577759127 3277 dbSNP
rs1191720026 3280 dbSNP
rs1055996249 3291 dbSNP
rs1181809743 3297 dbSNP
rs1444113567 3299 dbSNP
rs1238945897 3300 dbSNP
rs938546102 3302 dbSNP
rs1379285087 3306 dbSNP
rs1258996426 3310 dbSNP
rs928525042 3338 dbSNP
rs1197787376 3342 dbSNP
rs185806485 3343 dbSNP
rs977335734 3346 dbSNP
rs1250545169 3349 dbSNP
rs759199519 3350 dbSNP
rs776318759 3354 dbSNP
rs1329831197 3358 dbSNP
rs1323408931 3363 dbSNP
rs1312859973 3383 dbSNP
rs537980711 3385 dbSNP
rs985095485 3387 dbSNP
rs1485455201 3399 dbSNP
rs1210192712 3402 dbSNP
rs953210130 3411 dbSNP
rs1310922788 3430 dbSNP
rs607389 3431 dbSNP
rs927216574 3441 dbSNP
rs1156571179 3444 dbSNP
rs1372250180 3451 dbSNP
rs1344220092 3458 dbSNP
rs965567453 3459 dbSNP
rs571190303 3462 dbSNP
rs555950250 3463 dbSNP
rs971806623 3468 dbSNP
rs1379301711 3473 dbSNP
rs1020324008 3487 dbSNP
rs988889323 3489 dbSNP
rs1424030414 3490 dbSNP
rs1380982996 3506 dbSNP
rs181219416 3510 dbSNP
rs1322525230 3517 dbSNP
rs1033163368 3520 dbSNP
rs1267016077 3525 dbSNP
rs1027368185 3526 dbSNP
rs1007487383 3533 dbSNP
rs1212996532 3542 dbSNP
rs144621665 3550 dbSNP
rs1238707299 3554 dbSNP
rs1458753427 3561 dbSNP
rs761060695 3562 dbSNP
rs890013441 3565 dbSNP
rs1030333280 3570 dbSNP
rs894528692 3574 dbSNP
rs1055895799 3577 dbSNP
rs1250138330 3580 dbSNP
rs938504805 3592 dbSNP
rs997150488 3596 dbSNP
rs189701467 3598 dbSNP
rs1403057631 3603 dbSNP
rs1440166201 3610 dbSNP
rs1490788708 3611 dbSNP
rs1036103396 3612 dbSNP
rs940446888 3629 dbSNP
rs1289422815 3635 dbSNP
rs914501087 3648 dbSNP
rs1310763704 3652 dbSNP
rs887546810 3661 dbSNP
rs1235336197 3662 dbSNP
rs1232438810 3667 dbSNP
rs1258684102 3668 dbSNP
rs1319868657 3672 dbSNP
rs1202304174 3674 dbSNP
rs1231830046 3677 dbSNP
rs1483253941 3678 dbSNP
rs606132 3691 dbSNP
rs1048859640 3698 dbSNP
rs140800418 3701 dbSNP
rs185248149 3707 dbSNP
rs59902882 3707 dbSNP
rs1019828821 3717 dbSNP
rs9666975 3727 dbSNP
rs982957363 3733 dbSNP
rs1359817776 3734 dbSNP
rs1236307208 3739 dbSNP
rs1046101269 3740 dbSNP
rs1467644158 3742 dbSNP
rs951569230 3749 dbSNP
rs561223 3751 dbSNP
rs950046880 3758 dbSNP
rs545741538 3759 dbSNP
rs1413979335 3768 dbSNP
rs1278638891 3782 dbSNP
rs373128628 3783 dbSNP
rs1363751040 3785 dbSNP
rs913263258 3786 dbSNP
rs550536613 3791 dbSNP
rs569097722 3793 dbSNP
rs1211596283 3794 dbSNP
rs957427739 3795 dbSNP
rs1485159150 3797 dbSNP
rs531053958 3802 dbSNP
rs985611403 3803 dbSNP
rs995885041 3819 dbSNP
rs1301742960 3834 dbSNP
rs1474592623 3854 dbSNP
rs1186512340 3864 dbSNP
rs1426467521 3869 dbSNP
rs1416286457 3881 dbSNP
rs954355758 3887 dbSNP
rs1374882595 3892 dbSNP
rs1420560410 3898 dbSNP
rs1300204020 3903 dbSNP
rs1346821452 3905 dbSNP
rs1361778919 3919 dbSNP
rs1029910178 3921 dbSNP
rs1160348208 3928 dbSNP
rs1451749324 3929 dbSNP
rs1363397886 3930 dbSNP
rs1034827261 3934 dbSNP
rs901929292 3935 dbSNP
rs1236356966 3938 dbSNP
rs562004142 3938 dbSNP
rs1346448018 3939 dbSNP
rs28622268 3940 dbSNP
rs1198510043 3943 dbSNP
rs659943 3948 dbSNP
rs1215490971 3949 dbSNP
rs1247840041 3949 dbSNP
rs1445693864 3949 dbSNP
rs72193917 3949 dbSNP
rs965685943 3951 dbSNP
rs1479306229 3953 dbSNP
rs1041496704 3957 dbSNP
rs529031615 3958 dbSNP
rs560384557 3961 dbSNP
rs559353 3962 dbSNP
rs1256160528 3978 dbSNP
rs1224949490 3982 dbSNP
rs893015985 3986 dbSNP
rs577986140 3987 dbSNP
rs1054409967 3989 dbSNP
rs1001373483 3990 dbSNP
rs905726424 3995 dbSNP
rs768667487 3999 dbSNP
rs1281736395 4001 dbSNP
rs949994488 4002 dbSNP
rs1223331394 4010 dbSNP
rs181604505 4011 dbSNP
rs1053019869 4017 dbSNP
rs776855800 4024 dbSNP
rs1291060254 4025 dbSNP
rs1320888484 4029 dbSNP
rs1252909722 4033 dbSNP
rs1458314387 4049 dbSNP
rs1180557664 4053 dbSNP
rs1231208425 4054 dbSNP
rs543833894 4055 dbSNP
rs10897525 4063 dbSNP
rs1462812488 4064 dbSNP
rs1384365178 4065 dbSNP
rs985985990 4075 dbSNP
rs368606890 4077 dbSNP
rs1471077195 4082 dbSNP
rs780452871 4093 dbSNP
rs1284353058 4123 dbSNP
rs976938618 4128 dbSNP
rs555544527 4135 dbSNP
rs1273156916 4137 dbSNP
rs1319257584 4157 dbSNP
rs961593880 4160 dbSNP
rs1015862780 4165 dbSNP
rs1190947670 4169 dbSNP
rs1004513471 4173 dbSNP
rs951731517 4192 dbSNP
rs1027398749 4195 dbSNP
rs1248529122 4197 dbSNP
rs1437249208 4198 dbSNP
rs1001719864 4201 dbSNP
rs905677052 4203 dbSNP
rs1256231259 4213 dbSNP
rs555129550 4216 dbSNP
rs974374209 4217 dbSNP
rs9666831 4222 dbSNP
rs1185486841 4223 dbSNP
rs1416846923 4224 dbSNP
rs1014054995 4226 dbSNP
rs1169518321 4227 dbSNP
rs1393695618 4232 dbSNP
rs1262142585 4235 dbSNP
rs1408851676 4236 dbSNP
rs1334459474 4239 dbSNP
rs891677815 4245 dbSNP
rs1340505405 4246 dbSNP
rs767772365 4249 dbSNP
rs1356942681 4259 dbSNP
rs1412494085 4265 dbSNP
rs1293091299 4273 dbSNP
rs1272375002 4274 dbSNP
rs1052967009 4275 dbSNP
rs1326428064 4277 dbSNP
rs116137216 4279 dbSNP
rs1454697374 4285 dbSNP
rs904553898 4287 dbSNP
rs1034386634 4288 dbSNP
rs1049820035 4300 dbSNP
rs1210377919 4304 dbSNP
rs932707059 4310 dbSNP
rs922724981 4311 dbSNP
rs548667556 4313 dbSNP
rs9666331 4313 dbSNP
rs971413174 4321 dbSNP
rs1172688104 4323 dbSNP
rs553143832 4329 dbSNP
rs1388345385 4331 dbSNP
rs940174932 4334 dbSNP
rs1376691201 4335 dbSNP
rs1020340621 4338 dbSNP
rs1311830727 4339 dbSNP
rs1361651363 4352 dbSNP
rs1384263438 4355 dbSNP
rs1010012905 4359 dbSNP
rs908793764 4360 dbSNP
rs1326321613 4361 dbSNP
rs142692894 4379 dbSNP
rs1305748251 4381 dbSNP
rs1054778508 4386 dbSNP
rs1210441898 4390 dbSNP
rs1475023830 4404 dbSNP
rs570778829 4407 dbSNP
rs1486101566 4416 dbSNP
rs148473896 4418 dbSNP
rs1184850614 4429 dbSNP
rs1259352947 4430 dbSNP
rs1442272584 4436 dbSNP
rs1446380938 4450 dbSNP
rs1242071613 4458 dbSNP
rs1194125355 4459 dbSNP
rs1396371476 4459 dbSNP
rs1027757619 4461 dbSNP
rs1178879990 4462 dbSNP
rs1439254363 4464 dbSNP
rs979811033 4474 dbSNP
rs1384635258 4480 dbSNP
rs970182053 4483 dbSNP
rs1275548315 4486 dbSNP
rs1328434771 4490 dbSNP
rs1368952728 4493 dbSNP
rs1233641097 4497 dbSNP
rs1310318994 4500 dbSNP
rs1040024800 4501 dbSNP
rs1194481631 4501 dbSNP
rs537002429 4515 dbSNP
rs777765915 4519 dbSNP
rs907595248 4525 dbSNP
rs1214322649 4528 dbSNP
rs1254804485 4532 dbSNP
rs1466791203 4534 dbSNP
rs1024015459 4537 dbSNP
rs1192425118 4551 dbSNP
rs1250565145 4559 dbSNP
rs774012446 4563 dbSNP
rs75461864 4569 dbSNP
rs1363588124 4573 dbSNP
rs1462289086 4577 dbSNP
rs116476958 4579 dbSNP
rs1380686244 4580 dbSNP
rs764785322 4581 dbSNP
rs528576767 4601 dbSNP
rs1298843147 4603 dbSNP
rs1375550726 4607 dbSNP
rs1389899102 4609 dbSNP
rs1306559877 4618 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000294066.2 | 3UTR | GGGGUUCGAGACCAGCCUGGCCAACAUGGUGAAACCCCGUCUCUACUAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla 0.754 1.5e-3 0.753 1.5e-3 13 Click to see details
GSE38226 Liver fibrosis -0.312 8.4e-2 -0.478 1.4e-2 21 Click to see details
GSE42095 Differentiated embryonic stem cells 0.233 1.4e-1 0.197 1.8e-1 23 Click to see details
GSE28544 Breast cancer -0.204 1.7e-1 -0.217 1.5e-1 24 Click to see details
GSE26953 Aortic valvular endothelial cells 0.125 2.8e-1 0.063 3.8e-1 24 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.082 3.5e-1 -0.035 4.3e-1 25 Click to see details
GSE32688 Pancreatic cancer -0.014 4.7e-1 -0.081 3.3e-1 32 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
186 hsa-miR-1303 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT035871 SOAT1 sterol O-acyltransferase 1 1 1
MIRT035872 FHOD3 formin homology 2 domain containing 3 1 1
MIRT035873 RPL7A ribosomal protein L7a 1 1
MIRT035874 NCAPD2 non-SMC condensin I complex subunit D2 1 1
MIRT035875 RPS8 ribosomal protein S8 1 1
MIRT035876 AHNAK AHNAK nucleoprotein 1 1
MIRT035877 ACTB actin beta 1 1
MIRT035878 DEF8 differentially expressed in FDCP 8 homolog 1 1
MIRT035879 MET MET proto-oncogene, receptor tyrosine kinase 1 1
MIRT035880 MED13 mediator complex subunit 13 1 1
MIRT035881 FAT3 FAT atypical cadherin 3 1 1
MIRT035882 HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 1 1
MIRT035883 RPS16 ribosomal protein S16 1 1
MIRT035884 CDK6 cyclin dependent kinase 6 1 1
MIRT035885 GEMIN5 gem nuclear organelle associated protein 5 1 1
MIRT035886 PITRM1 pitrilysin metallopeptidase 1 1 1
MIRT035887 PRRC2A proline rich coiled-coil 2A 1 1
MIRT035888 KIAA0226 RUN and cysteine rich domain containing beclin 1 interacting protein 1 1
MIRT035889 MLLT6 MLLT6, PHD finger containing 1 1
MIRT035890 EIF3I eukaryotic translation initiation factor 3 subunit I 1 1
MIRT035891 FASN fatty acid synthase 1 1
MIRT035892 LEPREL4 prolyl 3-hydroxylase family member 4 (non-enzymatic) 1 1
MIRT035893 HSCB HscB mitochondrial iron-sulfur cluster cochaperone 1 1
MIRT035894 PSME4 proteasome activator subunit 4 1 1
MIRT035895 FRS2 fibroblast growth factor receptor substrate 2 1 1
MIRT035896 ZNF264 zinc finger protein 264 1 1
MIRT035897 HYLS1 HYLS1, centriolar and ciliogenesis associated 1 1
MIRT035898 USP54 ubiquitin specific peptidase 54 1 1
MIRT035899 L1TD1 LINE1 type transposase domain containing 1 1 1
MIRT035900 OR51E2 olfactory receptor family 51 subfamily E member 2 1 1
MIRT053762 CLDN18 claudin 18 3 1
MIRT060730 RPS3 ribosomal protein S3 2 2
MIRT083986 RAB22A RAB22A, member RAS oncogene family 2 2
MIRT098550 TBPL1 TATA-box binding protein like 1 2 6
MIRT134983 TWF1 twinfilin actin binding protein 1 2 4
MIRT136956 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT222065 PURB purine rich element binding protein B 2 2
MIRT239574 UBN2 ubinuclein 2 2 4
MIRT261820 BUB3 BUB3, mitotic checkpoint protein 2 2
MIRT264698 C11ORF57 chromosome 11 open reading frame 57 2 4
MIRT308476 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT377481 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT442304 NEU3 neuraminidase 3 2 2
MIRT446083 SLC30A10 solute carrier family 30 member 10 2 2
MIRT449606 PRPF4 pre-mRNA processing factor 4 2 2
MIRT453767 NUCB1 nucleobindin 1 2 10
MIRT455603 SRSF3 serine and arginine rich splicing factor 3 2 2
MIRT455913 KIF2C kinesin family member 2C 2 2
MIRT460091 ZYG11B zyg-11 family member B, cell cycle regulator 2 4
MIRT460866 UBE2S ubiquitin conjugating enzyme E2 S 2 2
MIRT461339 NUP133 nucleoporin 133 2 2
MIRT463769 YOD1 YOD1 deubiquitinase 2 2
MIRT466368 THAP1 THAP domain containing 1 2 4
MIRT467168 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT468703 SDHD succinate dehydrogenase complex subunit D 2 2
MIRT469122 RNF126 ring finger protein 126 2 2
MIRT472426 NCBP2 nuclear cap binding protein subunit 2 2 4
MIRT479420 CDKN1B cyclin dependent kinase inhibitor 1B 2 8
MIRT484260 FAM177A1 family with sequence similarity 177 member A1 2 2
MIRT485468 IL6ST interleukin 6 signal transducer 2 10
MIRT490237 H2AFZ H2A histone family member Z 2 6
MIRT491002 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT492127 SUMO2 small ubiquitin-like modifier 2 2 2
MIRT499169 RBPJL recombination signal binding protein for immunoglobulin kappa J region like 2 2
MIRT499825 PCSK9 proprotein convertase subtilisin/kexin type 9 2 8
MIRT501794 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT503441 GINS4 GINS complex subunit 4 2 4
MIRT503688 MAVS mitochondrial antiviral signaling protein 2 5
MIRT506926 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT511430 HOXA10 homeobox A10 2 6
MIRT512415 LAYN layilin 2 4
MIRT513791 NIPAL3 NIPA like domain containing 3 2 4
MIRT516163 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 2 4
MIRT516513 PARK2 parkin RBR E3 ubiquitin protein ligase 2 2
MIRT516915 HINFP histone H4 transcription factor 2 2
MIRT517102 NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 2 2
MIRT517350 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT518019 ABHD15 abhydrolase domain containing 15 2 2
MIRT520945 SRSF10 serine and arginine rich splicing factor 10 2 2
MIRT525250 RNF213 ring finger protein 213 2 2
MIRT530634 PPIC peptidylprolyl isomerase C 2 4
MIRT530671 CHRNB1 cholinergic receptor nicotinic beta 1 subunit 2 4
MIRT531563 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT538205 CYR61 cysteine rich angiogenic inducer 61 2 2
MIRT538419 COLEC10 collectin subfamily member 10 2 2
MIRT541964 ZNF485 zinc finger protein 485 2 2
MIRT543088 KNSTRN kinetochore localized astrin/SPAG5 binding protein 2 2
MIRT543257 ZNF662 zinc finger protein 662 2 2
MIRT543589 KIAA1549 KIAA1549 2 2
MIRT543955 RNF20 ring finger protein 20 2 2
MIRT544043 C9orf64 chromosome 9 open reading frame 64 2 4
MIRT548064 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT548240 FBXW7 F-box and WD repeat domain containing 7 2 2
MIRT548442 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 2
MIRT548623 DAZAP1 DAZ associated protein 1 2 4
MIRT548770 COLEC12 collectin subfamily member 12 2 2
MIRT549506 HDDC2 HD domain containing 2 2 4
MIRT551924 AKAP8 A-kinase anchoring protein 8 2 4
MIRT555656 PGRMC1 progesterone receptor membrane component 1 2 2
MIRT556286 MAP3K5 mitogen-activated protein kinase kinase kinase 5 2 2
MIRT557012 HOXD13 homeobox D13 2 4
MIRT563907 CLSPN claspin 2 2
MIRT565527 SON SON DNA binding protein 2 2
MIRT568000 COMMD2 COMM domain containing 2 2 2
MIRT569831 PLA2G16 phospholipase A2 group XVI 2 4
MIRT573905 PARP1 poly(ADP-ribose) polymerase 1 2 2
MIRT616589 KLHL9 kelch like family member 9 2 2
MIRT617137 ZNF556 zinc finger protein 556 2 2
MIRT617400 API5 apoptosis inhibitor 5 2 2
MIRT617455 CCS copper chaperone for superoxide dismutase 2 2
MIRT617799 ZNF793 zinc finger protein 793 2 2
MIRT618190 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT618303 GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 2 2
MIRT618329 ZNF813 zinc finger protein 813 2 2
MIRT618820 PHF20 PHD finger protein 20 2 2
MIRT619153 PPDPF pancreatic progenitor cell differentiation and proliferation factor 2 2
MIRT619530 ZNF708 zinc finger protein 708 2 2
MIRT619849 KIR3DX1 killer cell immunoglobulin like receptor, three Ig domains X1 2 2
MIRT620806 SLC26A2 solute carrier family 26 member 2 2 2
MIRT621312 YIPF4 Yip1 domain family member 4 2 2
MIRT621358 GUCA1B guanylate cyclase activator 1B 2 2
MIRT621366 ART4 ADP-ribosyltransferase 4 (Dombrock blood group) 2 2
MIRT621547 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT621883 TAOK1 TAO kinase 1 2 2
MIRT622451 RNF19B ring finger protein 19B 2 2
MIRT623404 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT623587 IPO9 importin 9 2 2
MIRT623974 FAM63A MINDY lysine 48 deubiquitinase 1 2 2
MIRT624086 DPP8 dipeptidyl peptidase 8 2 2
MIRT624108 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT632486 RNF8 ring finger protein 8 2 2
MIRT634057 PLIN3 perilipin 3 2 2
MIRT634657 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT640682 MCUR1 mitochondrial calcium uniporter regulator 1 2 2
MIRT641242 CENPN centromere protein N 2 2
MIRT642260 ZNF677 zinc finger protein 677 2 2
MIRT642954 RELA RELA proto-oncogene, NF-kB subunit 2 2
MIRT644326 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT644632 ICA1L islet cell autoantigen 1 like 2 2
MIRT645721 POLR3A RNA polymerase III subunit A 2 2
MIRT647850 LYPLA1 lysophospholipase I 2 2
MIRT649281 NEK8 NIMA related kinase 8 2 2
MIRT650038 VHL von Hippel-Lindau tumor suppressor 2 2
MIRT650354 RRP36 ribosomal RNA processing 36 2 2
MIRT651144 ZNF384 zinc finger protein 384 2 2
MIRT651778 UTP6 UTP6, small subunit processome component 2 2
MIRT652576 TLCD2 TLC domain containing 2 2 2
MIRT654621 PTPRJ protein tyrosine phosphatase, receptor type J 2 2
MIRT656023 MYO5A myosin VA 2 2
MIRT656105 MSRB3 methionine sulfoxide reductase B3 2 2
MIRT657749 GMEB1 glucocorticoid modulatory element binding protein 1 2 2
MIRT657924 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT658848 DUSP19 dual specificity phosphatase 19 2 2
MIRT659100 DENND6A DENN domain containing 6A 2 2
MIRT659153 DCX doublecortin 2 2
MIRT660870 ADRBK2 G protein-coupled receptor kinase 3 2 2
MIRT661941 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT663577 C10orf32 BLOC-1 related complex subunit 7 2 2
MIRT664625 WDPCP WD repeat containing planar cell polarity effector 2 4
MIRT666562 RHOBTB3 Rho related BTB domain containing 3 2 2
MIRT669992 GPR156 G protein-coupled receptor 156 2 4
MIRT670445 RSBN1L round spermatid basic protein 1 like 2 2
MIRT670853 IFNAR1 interferon alpha and beta receptor subunit 1 2 4
MIRT671942 SPPL3 signal peptide peptidase like 3 2 2
MIRT674269 LMOD3 leiomodin 3 2 2
MIRT674424 MIOX myo-inositol oxygenase 2 4
MIRT674982 ATP5G1 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C1 (subunit 9) 2 2
MIRT675038 BACE2 beta-site APP-cleaving enzyme 2 2 4
MIRT675309 C2orf68 chromosome 2 open reading frame 68 2 2
MIRT675641 TTPAL alpha tocopherol transfer protein like 2 2
MIRT688688 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT689369 ZNF101 zinc finger protein 101 2 2
MIRT689605 AKAP6 A-kinase anchoring protein 6 2 2
MIRT691715 LARS leucyl-tRNA synthetase 2 2
MIRT695473 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT695530 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 2
MIRT695878 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT696586 ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 2 2
MIRT703007 HEATR5A HEAT repeat containing 5A 2 2
MIRT707942 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 2
MIRT709765 GPR183 G protein-coupled receptor 183 2 2
MIRT710332 ZNF669 zinc finger protein 669 2 2
MIRT713249 ZFP30 ZFP30 zinc finger protein 2 2
MIRT716613 RBM18 RNA binding motif protein 18 2 2
MIRT733414 BAG2 BCL2 associated athanogene 2 2 0
MIRT756135 THSD7A thrombospondin type 1 domain containing 7A 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-1 Anthocyanin NULL 145858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Caffeic acid NULL 689043 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Catechin approved 9064 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Curcumin NULL 969516 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Ferulic acid NULL 445858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Hesperidin NULL 10621 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Quercetin NULL 5280343 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Galactose NULL 6036 Quantitative real-time PCR lens 22736950 2012 up-regulated
miR-1 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Quantitative real-time PCR myocardial differentiation of mouse ES cells 19521018 2009 down-regulated
miR-1 Sulfonyl-hydrazone-1 (SHZ) NULL NULL Quantitative real-time PCR Murine broblast-derived Induced pluripotent stem cells 21445862 2011 up-regulated
miR-1 Cocaine NULL 446220 Next-generation sequencing ventral striatum 21708909 2011 up-regulated
miR-1 Atorvastatin approved 60823 Quantitative real-time PCR Cardiomyocyte 23860036 2013 down-regualted
miR-1 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-1 Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 Palmitic acid approved 985 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 17beta-estradiol (E2) approved 5757 Microarray MCF-7AKT breast cancer cells 19528081 2009 down-regulated
miR-1 Essential amino acids (EAA) NULL NULL Quantitative real-time PCR skeletal muscle of young adults 19828686 2009 up-regulated
miR-1 Hydrogen peroxide (H2O2) NULL 784 Quantitative real-time PCR Human umbilical vein endothelial cells 21527937 2011 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Microarray apoptosis-resistant breast cancer cells 21971930 2011 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR acute promyelocytic leukemia 22072212 2012 up-regulated
miR-1 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miR-1 Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR cardia 22889704 2012 up-regulated
miR-1 Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 up-regulated
miR-1 Quinidine approved 441074 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 up-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 down-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR post-infarction rat cardiomyocytes 21220930 2011 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miR-1 Dexamethasone approved 5743 Microarray adrenals and granulosa cells 24205079 2014 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1303 Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (RKO)
hsa-miR-1303 Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HT-29)
hsa-miR-1303 Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-miR-1303 Fulvestrant 17756771 NSC719276 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-1303 Rituximab sensitive High Diffuse Large B-Cell Lymphoma cell line (DB, NU-DHL-1, NU-DUL-1, MC-116, SU-DHL-4, SU-DHL-5, FARAGE, HBL-1, OCI-Ly3, OCI-Ly7, OCI-Ly8, OCI-Ly19, RIVA, SU-DHL-8, U2932)
hsa-miR-1303 Etoposide 36462 NSC141540 approved resistant High Colorectal Cancer cell line (HCT8)
hsa-miR-1303 Doxorubicin 31703 NSC123127 approved resistant High Colorectal Cancer cell line (HCT8)
hsa-miR-1303 Vinorelbine 44424639 approved resistant High Colorectal Cancer cell line (HCT8)
hsa-miR-1303 Vincristine 5978 approved resistant High Colorectal Cancer cell line (HCT8)
hsa-miR-1303 Paclitaxel 36314 NSC125973 approved resistant High Colorectal Cancer cell line (HCT8)
hsa-mir-1303 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-mir-1303 Cisplatin 5460033 NSC119875 approved resistant cell line (W1)
hsa-mir-1303 Topotecan 60699 NSC609699 approved resistant cell line (W1)
hsa-mir-1303 Androstenedione+Letrozole resistant cell line (MCF-7)
hsa-miR-1303 Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-1303 Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-1303 Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-1303 Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-1303 Palbociclib 5330286 NSC758247 approved resistant tissue (breast cancer)
hsa-miR-1303 Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-1303 Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-1303 Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-miR-1303 Doxorubicin 31703 NSC123127 approved resistant cell line (HS578T)
hsa-miR-1303 Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-1303 Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-1303 Oxaliplatin 6857599 NSC266046 approved sensitive cell line (IGROV-1)
hsa-miR-1303 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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