pre-miRNA Information
pre-miRNA hsa-mir-216a   
Genomic Coordinates chr2: 55988950 - 55989059
Description Homo sapiens miR-216a stem-loop
Comment This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-216a-5p
Sequence 19| UAAUCUCAGCUGGCAACUGUGA |40
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 15 2 - 55989027 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs757094946 2 dbSNP
rs746980700 8 dbSNP
rs1249388997 12 dbSNP
rs1188616124 15 dbSNP
rs1490501989 19 dbSNP
rs1465789697 20 dbSNP
rs370221981 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Biomarker Information
Biomarker ID Name Type Discovered From Mode Level Source Testing Methods
BA0G4V miR-216a Safety Biomarker (SAF) Clinical/Experimental Data Expression Increase Tissue .
BA0G4V miR-216a Safety Biomarker (SAF) Clinical/Experimental Data Expression Increase Plasma MiRNA qPCR analyses
Gene Information
Gene Symbol IER3IP1   
Synonyms HSPC039, MEDS, PRO2309
Description immediate early response 3 interacting protein 1
Transcript NM_016097   
Expression
Putative miRNA Targets on IER3IP1
3'UTR of IER3IP1
(miRNA target sites are highlighted)
>IER3IP1|NM_016097|3'UTR
   1 ATATCAGTGGAGAAAATGGAGACTCAGAAGAGGACATGCCAGTAGAAGTTATTACTTTGGTCATTATTGGAATATTTATA
  81 TCTTAGCTGGCTGACCTTGCACTTGTCAAAAATGTAAAGCTGAAAATAAAACCAGGGTTTCTATTTATCTGTTTTTTTTT
 161 TTAATGTTGCACTTGTAGTTTCATTACAAAAGATCAGATCATGAAAGGCAGTAACTCTCCAGGACTGGAATATCTGATTG
 241 CTCAGTGTTAATAGTAGTTCATGCTGTGGTGAGATTGTTAAAAGGGTGCAAGACTGTTGCTTCTCTTTTTTTAGATATTT
 321 TTCTATCTCTCACTTCTCAGGGATGAAATTCTTTTTCAAAGTTTTGAAGTTCCTTGCAACTTAGCCATGATGTGAGTGGT
 401 TATCCCTAGATAAAATTAAAAGGATTTTTAAAAAGTAATTACTGCACATAAAATGATAAATAGGTAATTTGAATAATTTT
 481 ATTTTAAGCTCCTTGGTTAATTATTTTGTCTATTGTCTCAGCTATAAATTCAAATTTATACATACTATTGAGTATTAATA
 561 TTCTCTGATTTCAGGGAGAATTCTGTCAGTCACATGATGATTATGTTTTTGTTTAACATTCTTTCCATGCACTTGTTATT
 641 TTATTAATTTGCCTGAATGATGAGACCAGACCAGTGTCTACAGATTTTCATTGTCAGAAAAATCTATAAGTCTGCCCTTT
 721 TTACAATGATGATTTAAAAAAAACAACAGCGTAAATATTAGCCCACAAGAGCAGTCCTAAACAATCACAATTACACTGTA
 801 CTACCCAAGAAGACTGTTTATTGTGAAGCATTTACCTTTCAAAAAATCATTACATTTCTATTTCTTGGTGGAGCAGCACA
 881 TTGTGGAGTGTGATTCTTAATTCTTCATTGAGTTTGTCAATAGGACATTGATGCTGGATAGGTTGTCTTTTGTTTTTATG
 961 TCTCAGACCATCTTGTGAGATTGTTTGCCTATCTCATAATACAGTTTTATGCAGAAAGGTTGAAACTATGTAAATGGTTT
1041 TTATGGAAATTATCAGTTACAATATTTTAAAGGTGTAGAATGGCATCTTTGTTTATAGGAGAACATTTGTAAATAAAGTT
1121 AAATTTCTAAGTCAAGCACTTGTTTTTGTACCTTAGTA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agUGUCA---ACGGU-CGACUCUAAu 5'
            ::|||   |||:: | ||||||| 
Target 5' taGTAGTTCATGCTGTGGTGAGATTg 3'
252 - 277 156.00 -12.90
2
miRNA  3' aguGUCAACGGUCG---ACUCUAAu 5'
             |||   ||| |   ||||||| 
Target 5' tctCAG--ACCATCTTGTGAGATTg 3'
961 - 983 147.00 -11.50
3
miRNA  3' aguGUCAACGGU--CGACUCUAAu 5'
             || || :||  | ||| ||| 
Target 5' tctCACTTCTCAGGGATGAAATTc 3'
328 - 351 125.00 -5.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
433137 58 ClinVar
COSN21649703 12 COSMIC
COSN30474666 76 COSMIC
COSN9335774 96 COSMIC
COSN27310939 151 COSMIC
COSN27430091 152 COSMIC
COSN30528724 156 COSMIC
COSN25751696 166 COSMIC
COSN26713540 169 COSMIC
COSN31532562 262 COSMIC
COSN16029186 317 COSMIC
COSN1744743 717 COSMIC
COSN22624214 930 COSMIC
COSN15216567 1285 COSMIC
COSN9839293 1514 COSMIC
COSN16832680 1961 COSMIC
COSN15123047 1965 COSMIC
COSN8679588 1988 COSMIC
COSN21350562 2303 COSMIC
COSN1744741 3072 COSMIC
COSN15952304 3127 COSMIC
COSN27668568 3204 COSMIC
COSN29594539 3244 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs749007188 1 dbSNP
rs775411047 3 dbSNP
rs1002821141 6 dbSNP
rs916586551 7 dbSNP
rs769564169 8 dbSNP
rs1237026027 10 dbSNP
rs1331889044 11 dbSNP
rs745519452 15 dbSNP
rs1385314520 25 dbSNP
rs780790399 26 dbSNP
rs1298914537 27 dbSNP
rs3087769 31 dbSNP
rs1359876231 32 dbSNP
rs1156596040 33 dbSNP
rs1344963768 34 dbSNP
rs1467451188 35 dbSNP
rs567516352 45 dbSNP
rs778107644 48 dbSNP
rs1375098115 51 dbSNP
rs1435063980 52 dbSNP
rs150586939 58 dbSNP
rs368650486 59 dbSNP
rs1381574211 68 dbSNP
rs948968140 70 dbSNP
rs1296210875 80 dbSNP
rs1259593900 83 dbSNP
rs909333862 84 dbSNP
rs141895318 89 dbSNP
rs1261113222 97 dbSNP
rs571373851 98 dbSNP
rs1212637263 100 dbSNP
rs1282894086 105 dbSNP
rs1485136907 106 dbSNP
rs983524637 113 dbSNP
rs1263064045 114 dbSNP
rs1430333757 116 dbSNP
rs950876202 120 dbSNP
rs1241376295 122 dbSNP
rs759574468 136 dbSNP
rs1394601772 143 dbSNP
rs1454859057 151 dbSNP
rs1030895846 152 dbSNP
rs77002332 152 dbSNP
rs1289322113 163 dbSNP
rs201064144 163 dbSNP
rs1312085649 164 dbSNP
rs1385047558 167 dbSNP
rs1324607573 168 dbSNP
rs1371165844 169 dbSNP
rs565371393 172 dbSNP
rs1236037492 187 dbSNP
rs1415535917 188 dbSNP
rs1306636061 195 dbSNP
rs545480696 198 dbSNP
rs1006552174 211 dbSNP
rs893455661 212 dbSNP
rs1487120923 222 dbSNP
rs1296930771 225 dbSNP
rs939780348 241 dbSNP
rs1252439280 244 dbSNP
rs1468967285 249 dbSNP
rs1195666405 251 dbSNP
rs1399965000 252 dbSNP
rs908280695 253 dbSNP
rs1418244615 260 dbSNP
rs767342552 266 dbSNP
rs955216544 270 dbSNP
rs1459795001 276 dbSNP
rs1164205891 284 dbSNP
rs1394494314 291 dbSNP
rs1442483057 295 dbSNP
rs920904738 297 dbSNP
rs1372198081 301 dbSNP
rs1391658580 303 dbSNP
rs1308134997 315 dbSNP
rs975750548 318 dbSNP
rs761876385 322 dbSNP
rs1319168412 323 dbSNP
rs1160660571 325 dbSNP
rs1335491054 333 dbSNP
rs967970349 337 dbSNP
rs1231292626 341 dbSNP
rs1366413987 343 dbSNP
rs1178052987 353 dbSNP
rs1252399143 358 dbSNP
rs1022109908 359 dbSNP
rs1474106539 363 dbSNP
rs1187068516 364 dbSNP
rs1418516197 376 dbSNP
rs999201038 393 dbSNP
rs1167669796 422 dbSNP
rs902362830 422 dbSNP
rs1259048587 429 dbSNP
rs1046615648 432 dbSNP
rs551870994 433 dbSNP
rs774159168 439 dbSNP
rs1299598213 453 dbSNP
rs1352650050 460 dbSNP
rs956158599 463 dbSNP
rs1293166517 464 dbSNP
rs1356622538 471 dbSNP
rs1235728637 476 dbSNP
rs1270954687 477 dbSNP
rs1205403542 487 dbSNP
rs1307057686 487 dbSNP
rs1253312513 493 dbSNP
rs191595406 494 dbSNP
rs1468019164 496 dbSNP
rs528591728 504 dbSNP
rs1258013670 507 dbSNP
rs1262080519 508 dbSNP
rs1055043415 510 dbSNP
rs1184774088 512 dbSNP
rs1002921901 513 dbSNP
rs907206677 514 dbSNP
rs1428601351 515 dbSNP
rs1172019909 516 dbSNP
rs1487618795 520 dbSNP
rs16949034 525 dbSNP
rs1013609058 547 dbSNP
rs898736483 550 dbSNP
rs1312628554 552 dbSNP
rs1376503846 559 dbSNP
rs1038579934 566 dbSNP
rs35726685 583 dbSNP
rs940166722 586 dbSNP
rs1361292121 587 dbSNP
rs1215265362 590 dbSNP
rs750179892 594 dbSNP
rs764415950 596 dbSNP
rs1233940644 602 dbSNP
rs1336989926 615 dbSNP
rs1345955399 625 dbSNP
rs1276409390 628 dbSNP
rs887232992 630 dbSNP
rs1050838268 632 dbSNP
rs542820094 638 dbSNP
rs929345347 639 dbSNP
rs1213479246 646 dbSNP
rs933727953 646 dbSNP
rs1327599634 652 dbSNP
rs573836137 658 dbSNP
rs775239916 661 dbSNP
rs548996218 663 dbSNP
rs1453408832 664 dbSNP
rs1173951097 666 dbSNP
rs1395998288 670 dbSNP
rs946656404 671 dbSNP
rs1388097720 681 dbSNP
rs1416530537 686 dbSNP
rs976691111 689 dbSNP
rs1461665334 695 dbSNP
rs1432161466 701 dbSNP
rs368065227 703 dbSNP
rs915151422 706 dbSNP
rs1233846318 709 dbSNP
rs200246920 710 dbSNP
rs769608786 716 dbSNP
rs745352280 726 dbSNP
rs200570860 728 dbSNP
rs148825959 734 dbSNP
rs1217936341 736 dbSNP
rs1317418204 736 dbSNP
rs1250591974 743 dbSNP
rs1193812652 744 dbSNP
rs1467642869 744 dbSNP
rs201115046 744 dbSNP
rs1252180284 745 dbSNP
rs1031944995 749 dbSNP
rs529253691 751 dbSNP
rs902225627 755 dbSNP
rs1256232848 759 dbSNP
rs1392300321 771 dbSNP
rs1440284442 774 dbSNP
rs1326777695 782 dbSNP
rs1333015596 788 dbSNP
rs141766622 800 dbSNP
rs1013874799 803 dbSNP
rs187175176 805 dbSNP
rs1230082003 807 dbSNP
rs1055062860 809 dbSNP
rs1333461576 812 dbSNP
rs1272473451 815 dbSNP
rs941904223 821 dbSNP
rs540392061 823 dbSNP
rs1291453373 825 dbSNP
rs1435696379 839 dbSNP
rs1180720129 840 dbSNP
rs1232661614 846 dbSNP
rs1470721190 854 dbSNP
rs887782500 857 dbSNP
rs1231749752 860 dbSNP
rs1165715110 878 dbSNP
rs1393041434 887 dbSNP
rs577928958 889 dbSNP
rs796234358 894 dbSNP
rs1023415511 901 dbSNP
rs564142124 906 dbSNP
rs577258223 913 dbSNP
rs1396303566 914 dbSNP
rs544324119 923 dbSNP
rs148061497 924 dbSNP
rs183382447 926 dbSNP
rs535107293 929 dbSNP
rs976175269 931 dbSNP
rs534373290 939 dbSNP
rs1169536496 941 dbSNP
rs943563117 943 dbSNP
rs1483560652 947 dbSNP
rs1477012191 948 dbSNP
rs1255901651 951 dbSNP
rs779675989 952 dbSNP
rs1017200504 955 dbSNP
rs1189350162 960 dbSNP
rs1394188184 967 dbSNP
rs1194101876 977 dbSNP
rs370755992 981 dbSNP
rs1455736358 983 dbSNP
rs1236633828 989 dbSNP
rs191518284 998 dbSNP
rs14524 1003 dbSNP
rs1051250438 1004 dbSNP
rs1031975679 1018 dbSNP
rs1431906332 1022 dbSNP
rs977759852 1025 dbSNP
rs1199191789 1026 dbSNP
rs966398173 1027 dbSNP
rs933759744 1028 dbSNP
rs1281484450 1030 dbSNP
rs1415319979 1043 dbSNP
rs1314781337 1044 dbSNP
rs1025167120 1050 dbSNP
rs553276861 1062 dbSNP
rs9831 1063 dbSNP
rs1039810735 1075 dbSNP
rs946385183 1077 dbSNP
rs1372694396 1079 dbSNP
rs1278624260 1080 dbSNP
rs1277449320 1085 dbSNP
rs1201466815 1094 dbSNP
rs778156562 1095 dbSNP
rs1441065964 1100 dbSNP
rs1445313327 1104 dbSNP
rs1335783465 1109 dbSNP
rs1390920013 1124 dbSNP
rs571532485 1125 dbSNP
rs935221589 1130 dbSNP
rs887730102 1135 dbSNP
rs866099757 1137 dbSNP
rs1304471253 1151 dbSNP
rs1382742741 1154 dbSNP
rs115994926 1157 dbSNP
rs1174008868 1160 dbSNP
rs1366818044 1168 dbSNP
rs879613514 1169 dbSNP
rs981952550 1170 dbSNP
rs993929957 1179 dbSNP
rs1436402299 1184 dbSNP
rs901831163 1187 dbSNP
rs1040871867 1189 dbSNP
rs2251948 1192 dbSNP
rs569156756 1198 dbSNP
rs1248720682 1199 dbSNP
rs1234610477 1203 dbSNP
rs1466314859 1210 dbSNP
rs991942883 1214 dbSNP
rs1252637980 1216 dbSNP
rs1485621734 1218 dbSNP
rs1258882445 1221 dbSNP
rs962710945 1229 dbSNP
rs1433519815 1238 dbSNP
rs936161868 1239 dbSNP
rs1351910765 1248 dbSNP
rs763445080 1252 dbSNP
rs1159077218 1255 dbSNP
rs1390126259 1258 dbSNP
rs924902521 1261 dbSNP
rs1016915847 1268 dbSNP
rs1284033828 1268 dbSNP
rs1222792219 1269 dbSNP
rs1324755733 1270 dbSNP
rs1388201620 1284 dbSNP
rs977682477 1284 dbSNP
rs1280773546 1285 dbSNP
rs1334428706 1287 dbSNP
rs1412438866 1290 dbSNP
rs1269340266 1302 dbSNP
rs966805981 1307 dbSNP
rs1211940187 1310 dbSNP
rs1313371571 1311 dbSNP
rs1272673794 1314 dbSNP
rs1488919673 1317 dbSNP
rs1193207440 1318 dbSNP
rs368986839 1330 dbSNP
rs1416569696 1333 dbSNP
rs1343160318 1342 dbSNP
rs1182750937 1355 dbSNP
rs1004487452 1364 dbSNP
rs866728647 1370 dbSNP
rs1459846382 1376 dbSNP
rs575630048 1377 dbSNP
rs951592060 1381 dbSNP
rs1030272769 1385 dbSNP
rs998356560 1396 dbSNP
rs899621898 1397 dbSNP
rs1394715181 1401 dbSNP
rs1033423220 1402 dbSNP
rs1289484337 1413 dbSNP
rs1352840817 1417 dbSNP
rs72907280 1418 dbSNP
rs1474942649 1427 dbSNP
rs73954242 1432 dbSNP
rs1026265328 1434 dbSNP
rs1249854085 1442 dbSNP
rs1480163549 1445 dbSNP
rs1190634583 1461 dbSNP
rs1487601382 1465 dbSNP
rs893488196 1470 dbSNP
rs1253769175 1477 dbSNP
rs374334728 1478 dbSNP
rs531243129 1478 dbSNP
rs560457892 1489 dbSNP
rs1187218515 1492 dbSNP
rs138854761 1496 dbSNP
rs1413804468 1504 dbSNP
rs533139559 1507 dbSNP
rs564340849 1513 dbSNP
rs1167822477 1518 dbSNP
rs1217028356 1519 dbSNP
rs1353595658 1520 dbSNP
rs543964145 1521 dbSNP
rs1372861373 1530 dbSNP
rs1285961714 1537 dbSNP
rs927892801 1538 dbSNP
rs901857901 1547 dbSNP
rs1379922063 1551 dbSNP
rs1046696576 1552 dbSNP
rs947914852 1556 dbSNP
rs1230130584 1561 dbSNP
rs1293571360 1562 dbSNP
rs1333467026 1570 dbSNP
rs1293391265 1583 dbSNP
rs916364980 1585 dbSNP
rs187035292 1589 dbSNP
rs1276506785 1592 dbSNP
rs1484570711 1593 dbSNP
rs145080285 1594 dbSNP
rs1040334670 1614 dbSNP
rs183744377 1623 dbSNP
rs1184229597 1624 dbSNP
rs1418235285 1625 dbSNP
rs1359868933 1637 dbSNP
rs755250182 1642 dbSNP
rs1392347370 1648 dbSNP
rs1433268078 1649 dbSNP
rs909908274 1654 dbSNP
rs1175923512 1657 dbSNP
rs1360217767 1662 dbSNP
rs72907278 1662 dbSNP
rs1431261348 1663 dbSNP
rs1364632957 1670 dbSNP
rs1436004800 1681 dbSNP
rs951643954 1685 dbSNP
rs889233376 1691 dbSNP
rs572527492 1693 dbSNP
rs1313863734 1697 dbSNP
rs1213631353 1704 dbSNP
rs1240939786 1706 dbSNP
rs554020327 1708 dbSNP
rs964254068 1711 dbSNP
rs1250783108 1712 dbSNP
rs78989818 1718 dbSNP
rs924768222 1730 dbSNP
rs1395234825 1733 dbSNP
rs1426383470 1752 dbSNP
rs1018831749 1759 dbSNP
rs1010631520 1774 dbSNP
rs1477125454 1775 dbSNP
rs766414280 1783 dbSNP
rs1157562674 1794 dbSNP
rs1387926326 1801 dbSNP
rs1457857339 1810 dbSNP
rs893542113 1813 dbSNP
rs1322764596 1818 dbSNP
rs1369013156 1820 dbSNP
rs1436095717 1821 dbSNP
rs1275209275 1823 dbSNP
rs1369551691 1825 dbSNP
rs1419488004 1829 dbSNP
rs1221941864 1830 dbSNP
rs1267448471 1832 dbSNP
rs1329188678 1836 dbSNP
rs1210020907 1839 dbSNP
rs1052081937 1843 dbSNP
rs1467741356 1847 dbSNP
rs1199210406 1849 dbSNP
rs760683794 1852 dbSNP
rs551818496 1853 dbSNP
rs1479217250 1860 dbSNP
rs999142694 1862 dbSNP
rs534252603 1863 dbSNP
rs1476572066 1867 dbSNP
rs1245368662 1870 dbSNP
rs1473221781 1876 dbSNP
rs1046317453 1886 dbSNP
rs947935338 1891 dbSNP
rs1392387596 1893 dbSNP
rs751461679 1894 dbSNP
rs917583706 1901 dbSNP
rs747708472 1903 dbSNP
rs916434788 1915 dbSNP
rs1351387826 1919 dbSNP
rs764154266 1927 dbSNP
rs959027173 1928 dbSNP
rs141344002 1934 dbSNP
rs1037522239 1937 dbSNP
rs1467754532 1937 dbSNP
rs1290833670 1946 dbSNP
rs776311938 1953 dbSNP
rs373431839 1955 dbSNP
rs1355119538 1957 dbSNP
rs796510801 1957 dbSNP
rs1210049617 1961 dbSNP
rs984526452 1973 dbSNP
rs951873653 1974 dbSNP
rs941455242 1991 dbSNP
rs1273261502 2002 dbSNP
rs1251570638 2003 dbSNP
rs1238409574 2004 dbSNP
rs1483633098 2007 dbSNP
rs909960600 2017 dbSNP
rs1184970389 2021 dbSNP
rs538218517 2023 dbSNP
rs982820228 2023 dbSNP
rs1472540229 2029 dbSNP
rs1305674689 2038 dbSNP
rs1026122973 2039 dbSNP
rs1416182537 2040 dbSNP
rs1408456634 2056 dbSNP
rs1307119480 2065 dbSNP
rs1294823490 2066 dbSNP
rs1215122274 2067 dbSNP
rs993824851 2071 dbSNP
rs1363756861 2074 dbSNP
rs1300999952 2080 dbSNP
rs1440362826 2086 dbSNP
rs75109577 2091 dbSNP
rs1327980701 2092 dbSNP
rs1227226235 2095 dbSNP
rs1274280003 2097 dbSNP
rs775477265 2099 dbSNP
rs1207898602 2100 dbSNP
rs922563255 2103 dbSNP
rs190925575 2107 dbSNP
rs569296287 2116 dbSNP
rs964623587 2119 dbSNP
rs1018471818 2120 dbSNP
rs989597726 2124 dbSNP
rs957820733 2125 dbSNP
rs769559892 2127 dbSNP
rs1390546025 2129 dbSNP
rs999197569 2135 dbSNP
rs1393582390 2139 dbSNP
rs889095032 2145 dbSNP
rs906211235 2149 dbSNP
rs1396557400 2153 dbSNP
rs1335550361 2157 dbSNP
rs1193471207 2167 dbSNP
rs759331952 2168 dbSNP
rs746503639 2171 dbSNP
rs1343287945 2176 dbSNP
rs1231024912 2181 dbSNP
rs1254655910 2182 dbSNP
rs186422169 2192 dbSNP
rs1201536070 2198 dbSNP
rs1194930353 2199 dbSNP
rs950258486 2199 dbSNP
rs1037574164 2210 dbSNP
rs1479350926 2216 dbSNP
rs941840485 2218 dbSNP
rs896111740 2230 dbSNP
rs1451594936 2236 dbSNP
rs1196420184 2240 dbSNP
rs533521317 2241 dbSNP
rs1376867957 2249 dbSNP
rs1466423669 2256 dbSNP
rs1047188790 2257 dbSNP
rs776157204 2258 dbSNP
rs1456290907 2260 dbSNP
rs1320683712 2262 dbSNP
rs1366860386 2273 dbSNP
rs930025107 2274 dbSNP
rs1277920741 2279 dbSNP
rs922648739 2293 dbSNP
rs143296256 2299 dbSNP
rs1234588042 2300 dbSNP
rs1371960878 2306 dbSNP
rs1305850950 2316 dbSNP
rs977141753 2328 dbSNP
rs2635042 2334 dbSNP
rs1372624543 2335 dbSNP
rs746523587 2344 dbSNP
rs1208288967 2348 dbSNP
rs1298821578 2356 dbSNP
rs1433612919 2360 dbSNP
rs180826679 2369 dbSNP
rs546901417 2370 dbSNP
rs1409615622 2383 dbSNP
rs1472239261 2393 dbSNP
rs989650042 2395 dbSNP
rs569954638 2402 dbSNP
rs1374232413 2406 dbSNP
rs188261420 2412 dbSNP
rs1292646681 2420 dbSNP
rs1390437978 2423 dbSNP
rs1387749505 2432 dbSNP
rs1303903568 2435 dbSNP
rs1349117968 2439 dbSNP
rs748497406 2446 dbSNP
rs111626153 2454 dbSNP
rs556222050 2465 dbSNP
rs970864838 2467 dbSNP
rs779315474 2474 dbSNP
rs1242861519 2485 dbSNP
rs1397310329 2492 dbSNP
rs1265131281 2493 dbSNP
rs1177729492 2494 dbSNP
rs1416956870 2495 dbSNP
rs1211367007 2496 dbSNP
rs1249131972 2509 dbSNP
rs1012319113 2511 dbSNP
rs1482651925 2524 dbSNP
rs1177349633 2527 dbSNP
rs1413517943 2529 dbSNP
rs1163595967 2540 dbSNP
rs966268389 2540 dbSNP
rs71162834 2541 dbSNP
rs773079882 2541 dbSNP
rs895102855 2543 dbSNP
rs1459142066 2545 dbSNP
rs1016192122 2551 dbSNP
rs985996273 2552 dbSNP
rs1006109978 2555 dbSNP
rs1255369379 2555 dbSNP
rs866468154 2566 dbSNP
rs150456364 2568 dbSNP
rs1352384672 2575 dbSNP
rs530633438 2576 dbSNP
rs930100957 2578 dbSNP
rs1316620278 2579 dbSNP
rs1322498871 2580 dbSNP
rs1032950247 2587 dbSNP
rs1000245989 2589 dbSNP
rs139408820 2590 dbSNP
rs1205760832 2592 dbSNP
rs1253940922 2610 dbSNP
rs1482254410 2613 dbSNP
rs112101574 2624 dbSNP
rs1020787768 2630 dbSNP
rs1014450221 2638 dbSNP
rs1166398092 2641 dbSNP
rs1388689150 2642 dbSNP
rs1312766996 2645 dbSNP
rs1415965316 2661 dbSNP
rs543272974 2671 dbSNP
rs1429563997 2681 dbSNP
rs1041089166 2684 dbSNP
rs1446484588 2685 dbSNP
rs942696347 2692 dbSNP
rs1056064888 2693 dbSNP
rs911185070 2693 dbSNP
rs937553396 2697 dbSNP
rs541552329 2702 dbSNP
rs1451174391 2704 dbSNP
rs577519249 2707 dbSNP
rs1159168286 2708 dbSNP
rs56090313 2712 dbSNP
rs1415050863 2713 dbSNP
rs919053125 2714 dbSNP
rs1157543530 2722 dbSNP
rs1209337809 2723 dbSNP
rs1256067258 2725 dbSNP
rs1483978788 2733 dbSNP
rs55862199 2734 dbSNP
rs60726022 2735 dbSNP
rs181426566 2736 dbSNP
rs970537953 2740 dbSNP
rs572025981 2744 dbSNP
rs986027547 2745 dbSNP
rs953264421 2747 dbSNP
rs1413265696 2748 dbSNP
rs1176052866 2755 dbSNP
rs1359793448 2756 dbSNP
rs925866488 2758 dbSNP
rs1318656044 2762 dbSNP
rs1364667472 2762 dbSNP
rs1271647578 2763 dbSNP
rs1436102892 2763 dbSNP
rs1203219742 2765 dbSNP
rs75934126 2767 dbSNP
rs1261568315 2769 dbSNP
rs1301952713 2771 dbSNP
rs879765370 2771 dbSNP
rs2635043 2779 dbSNP
rs1292765128 2783 dbSNP
rs1244183759 2784 dbSNP
rs1191093899 2785 dbSNP
rs1234368082 2785 dbSNP
rs1426439492 2786 dbSNP
rs1357988237 2794 dbSNP
rs1293864613 2798 dbSNP
rs1382062450 2799 dbSNP
rs1386171975 2802 dbSNP
rs1015910366 2804 dbSNP
rs1289036811 2806 dbSNP
rs1458500237 2808 dbSNP
rs1320596964 2812 dbSNP
rs1391563867 2812 dbSNP
rs1457960752 2812 dbSNP
rs1435546788 2813 dbSNP
rs1006163643 2815 dbSNP
rs1347265079 2821 dbSNP
rs574246536 2825 dbSNP
rs950596396 2830 dbSNP
rs1026182386 2831 dbSNP
rs1370168310 2834 dbSNP
rs1225094105 2843 dbSNP
rs1287351327 2848 dbSNP
rs1190715302 2864 dbSNP
rs575770477 2865 dbSNP
rs555879418 2868 dbSNP
rs1247671208 2873 dbSNP
rs535990868 2880 dbSNP
rs1210764408 2888 dbSNP
rs1041531691 2891 dbSNP
rs1411314322 2893 dbSNP
rs1467316453 2895 dbSNP
rs1272623962 2899 dbSNP
rs1214461291 2902 dbSNP
rs763349841 2906 dbSNP
rs1472987047 2908 dbSNP
rs1160477887 2909 dbSNP
rs888734781 2913 dbSNP
rs1172189022 2915 dbSNP
rs1048675069 2916 dbSNP
rs1165140340 2924 dbSNP
rs994536525 2925 dbSNP
rs1327332495 2942 dbSNP
rs1006945327 2949 dbSNP
rs72907274 2950 dbSNP
rs1036123614 2951 dbSNP
rs752539844 2960 dbSNP
rs151329464 2963 dbSNP
rs911730297 2964 dbSNP
rs539850250 2970 dbSNP
rs1050256609 2974 dbSNP
rs1362112519 2980 dbSNP
rs1203603650 2985 dbSNP
rs72907271 2986 dbSNP
rs1483683964 3002 dbSNP
rs1184018373 3003 dbSNP
rs1235816716 3007 dbSNP
rs924188957 3009 dbSNP
rs1042601523 3016 dbSNP
rs1386838854 3019 dbSNP
rs1427629872 3021 dbSNP
rs949585727 3033 dbSNP
rs145009093 3035 dbSNP
rs918057998 3036 dbSNP
rs1339434390 3037 dbSNP
rs1448280994 3038 dbSNP
rs990991592 3044 dbSNP
rs201570437 3046 dbSNP
rs959089585 3054 dbSNP
rs1373369361 3059 dbSNP
rs1190351436 3065 dbSNP
rs1340602939 3066 dbSNP
rs1198079416 3069 dbSNP
rs1276576816 3069 dbSNP
rs1441969891 3072 dbSNP
rs1184412221 3076 dbSNP
rs16948987 3080 dbSNP
rs1447914710 3083 dbSNP
rs1187635367 3092 dbSNP
rs776298116 3093 dbSNP
rs1252662590 3099 dbSNP
rs568195879 3104 dbSNP
rs1194306730 3116 dbSNP
rs189869169 3117 dbSNP
rs1400842602 3122 dbSNP
rs1414583872 3122 dbSNP
rs1338165551 3124 dbSNP
rs1385920625 3129 dbSNP
rs913201606 3143 dbSNP
rs1453350834 3144 dbSNP
rs1327450839 3145 dbSNP
rs1230235874 3153 dbSNP
rs984444679 3156 dbSNP
rs528217217 3157 dbSNP
rs1344966583 3162 dbSNP
rs960366759 3164 dbSNP
rs141158432 3171 dbSNP
rs1208420076 3175 dbSNP
rs185304828 3176 dbSNP
rs531521119 3189 dbSNP
rs776365929 3190 dbSNP
rs193025000 3195 dbSNP
rs1480733716 3198 dbSNP
rs189439214 3208 dbSNP
rs185114490 3215 dbSNP
rs551466712 3218 dbSNP
rs544609184 3223 dbSNP
rs1320873975 3238 dbSNP
rs1441212038 3239 dbSNP
rs966282930 3245 dbSNP
rs1017413385 3247 dbSNP
rs1322011853 3250 dbSNP
rs1006953076 3252 dbSNP
rs1330972481 3253 dbSNP
rs889854600 3254 dbSNP
rs1053748332 3256 dbSNP
rs1327232307 3257 dbSNP
rs1227991818 3258 dbSNP
rs140238894 3258 dbSNP
rs890244852 3258 dbSNP
rs1326289878 3264 dbSNP
rs1486989780 3270 dbSNP
rs1390749006 3273 dbSNP
rs1397200252 3279 dbSNP
rs1000820468 3301 dbSNP
rs1266419444 3305 dbSNP
rs191341603 3306 dbSNP
rs931847956 3313 dbSNP
rs147797730 3315 dbSNP
rs1472002959 3318 dbSNP
rs1159239777 3326 dbSNP
rs186928064 3331 dbSNP
rs918099239 3332 dbSNP
rs1055283431 3335 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' agugucaACGGU-CGACUCUAAu 5'
                 |||:: | ||||||| 
Target 5' -------UGCUGUGGUGAGAUUg 3'
1 - 16
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000256433.3 | 3UTR | UGCUGUGGUGAGAUUGUUAAAAGGGUGCAAGACUGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE42095 Differentiated embryonic stem cells 0.587 1.6e-3 0.501 7.4e-3 23 Click to see details
GSE28544 Breast cancer -0.543 3.1e-3 -0.528 4.0e-3 24 Click to see details
GSE19350 CNS germ cell tumors -0.509 4.6e-2 -0.096 3.8e-1 12 Click to see details
GSE28260 Renal cortex and medulla -0.464 5.5e-2 -0.370 1.1e-1 13 Click to see details
GSE17306 Multiple myeloma -0.231 5.5e-2 0.358 5.8e-3 49 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.182 1.9e-1 0.526 3.5e-3 25 Click to see details
GSE32688 Pancreatic cancer -0.148 2.1e-1 -0.087 3.2e-1 32 Click to see details
GSE21687 Ependynoma primary tumors -0.102 2.1e-1 -0.208 5.0e-2 64 Click to see details
GSE38226 Liver fibrosis 0.169 2.3e-1 0.243 1.4e-1 21 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.124 2.8e-1 0.129 2.7e-1 25 Click to see details
GSE21849 B cell lymphoma -0.11 2.9e-1 0.046 4.1e-1 29 Click to see details
GSE14794 Lymphoblastoid cells -0.056 3.0e-1 -0.149 8.1e-2 90 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.093 3.5e-1 -0.411 3.6e-2 20 Click to see details
GSE27834 Pluripotent stem cells -0.087 3.7e-1 -0.100 3.6e-1 16 Click to see details
GSE26953 Aortic valvular endothelial cells -0.044 4.2e-1 -0.088 3.4e-1 24 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
KIRP 0.615 0 0.715 0 18 Click to see details
CHOL 0.465 0.12 0.452 0.13 8 Click to see details
BRCA -0.238 0.13 -0.212 0.15 25 Click to see details
UCEC -0.378 0.14 -0.261 0.23 10 Click to see details
BLCA 0.337 0.17 0.224 0.27 10 Click to see details
PAAD 0.639 0.18 0.200 0.4 4 Click to see details
LUSC -0.191 0.21 -0.214 0.18 20 Click to see details
KIRC -0.138 0.24 -0.054 0.39 29 Click to see details
LIHC 0.104 0.25 -0.004 0.49 45 Click to see details
STAD 0.091 0.35 -0.018 0.47 20 Click to see details
LUAD -0.147 0.35 -0.100 0.4 9 Click to see details
KICH -0.109 0.37 -0.118 0.36 11 Click to see details
ESCA 0.166 0.42 0.200 0.4 4 Click to see details
THCA 0.03 0.42 -0.023 0.44 47 Click to see details
HNSC -0.035 0.44 -0.117 0.3 23 Click to see details
PRAD 0.013 0.47 0.026 0.44 31 Click to see details
PRAD 0.013 0.47 0.026 0.44 31 Click to see details
PRAD 0.013 0.47 0.026 0.44 31 Click to see details
148 hsa-miR-216a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000534 PTEN phosphatase and tensin homolog 4 3
MIRT005018 SIRT1 sirtuin 1 3 1
MIRT005964 CDC42 cell division cycle 42 2 1
MIRT005969 CD44 CD44 molecule (Indian blood group) 2 1
MIRT007154 SMAD7 SMAD family member 7 1 1
MIRT054887 BECN1 beclin 1 5 3
MIRT067588 METAP2 methionyl aminopeptidase 2 2 6
MIRT099144 MYLIP myosin regulatory light chain interacting protein 2 12
MIRT162313 TGFBR2 transforming growth factor beta receptor 2 2 2
MIRT230668 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT256274 PHAX phosphorylated adaptor for RNA export 2 2
MIRT386817 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT386825 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT438816 HNF4A hepatocyte nuclear factor 4 alpha 1 1
MIRT464699 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 2
MIRT465962 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 2
MIRT466046 TMEM189 transmembrane protein 189 2 2
MIRT466482 TECPR2 tectonin beta-propeller repeat containing 2 2 7
MIRT472209 NGFRAP1 brain expressed X-linked 3 2 4
MIRT472562 NACC1 nucleus accumbens associated 1 2 4
MIRT478921 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT480121 CALR calreticulin 2 2
MIRT497754 OXGR1 oxoglutarate receptor 1 2 2
MIRT497967 TWISTNB TWIST neighbor 2 2
MIRT502882 CDK4 cyclin dependent kinase 4 2 8
MIRT510191 MON1B MON1 homolog B, secretory trafficking associated 2 4
MIRT512407 CD84 CD84 molecule 2 2
MIRT513739 PSD3 pleckstrin and Sec7 domain containing 3 2 4
MIRT526257 DROSHA drosha ribonuclease III 2 2
MIRT528968 FAM19A3 family with sequence similarity 19 member A3, C-C motif chemokine like 2 2
MIRT529599 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT529776 ZNF486 zinc finger protein 486 2 2
MIRT530110 PSAPL1 prosaposin like 1 (gene/pseudogene) 2 2
MIRT530504 FADS6 fatty acid desaturase 6 2 2
MIRT531437 PAK1 p21 (RAC1) activated kinase 1 2 2
MIRT534445 SDR16C5 short chain dehydrogenase/reductase family 16C member 5 2 2
MIRT537286 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT538451 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT543085 ACTB actin beta 2 2
MIRT550982 ZNF254 zinc finger protein 254 2 2
MIRT556259 MAPRE2 microtubule associated protein RP/EB family member 2 2 2
MIRT556639 LAMC1 laminin subunit gamma 1 2 2
MIRT559127 C11orf57 chromosome 11 open reading frame 57 2 2
MIRT561405 TUBB2A tubulin beta 2A class IIa 2 2
MIRT569677 SEC23B Sec23 homolog B, coat complex II component 2 4
MIRT574660 KLHL15 kelch like family member 15 2 2
MIRT575030 Tecpr2 tectonin beta-propeller repeat containing 2 2 5
MIRT617683 JRKL JRK like 2 2
MIRT618540 SEMA5A semaphorin 5A 2 2
MIRT620805 C1orf27 chromosome 1 open reading frame 27 2 2
MIRT621569 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT622133 SP4 Sp4 transcription factor 2 2
MIRT624913 CTCFL CCCTC-binding factor like 2 2
MIRT625010 PAK4 p21 (RAC1) activated kinase 4 2 2
MIRT626644 ZNF551 zinc finger protein 551 2 2
MIRT626646 ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 2 2
MIRT626672 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT627945 NNT nicotinamide nucleotide transhydrogenase 2 2
MIRT627963 NLK nemo like kinase 2 2
MIRT628767 SRSF7 serine and arginine rich splicing factor 7 2 2
MIRT629261 KDM2B lysine demethylase 2B 2 2
MIRT629422 ADM2 adrenomedullin 2 2 2
MIRT630238 SORD sorbitol dehydrogenase 2 2
MIRT631272 CENPM centromere protein M 2 4
MIRT631793 CLK4 CDC like kinase 4 2 2
MIRT632058 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT632485 RPS15A ribosomal protein S15a 2 2
MIRT632611 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT632708 MTA3 metastasis associated 1 family member 3 2 2
MIRT632815 INO80 INO80 complex subunit 2 2
MIRT635956 PLA2G12A phospholipase A2 group XIIA 2 2
MIRT636152 UBXN2A UBX domain protein 2A 2 2
MIRT636899 C5orf45 MRN complex interacting protein 2 4
MIRT636930 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT637457 ZNF324B zinc finger protein 324B 2 2
MIRT637900 SLC19A3 solute carrier family 19 member 3 2 2
MIRT639826 ZNF638 zinc finger protein 638 2 2
MIRT640445 ERVMER34-1 endogenous retrovirus group MER34 member 1, envelope 2 2
MIRT640681 ARSK arylsulfatase family member K 2 2
MIRT641611 CAPN7 calpain 7 2 2
MIRT641676 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT646786 IL23R interleukin 23 receptor 2 2
MIRT648352 A2ML1 alpha-2-macroglobulin like 1 2 2
MIRT649144 SPATA5 spermatogenesis associated 5 2 2
MIRT649254 TRIM65 tripartite motif containing 65 2 2
MIRT652491 TMEM178B transmembrane protein 178B 2 2
MIRT653308 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT653945 SEPSECS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase 2 2
MIRT654212 RNF19B ring finger protein 19B 2 2
MIRT654839 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT655159 PHF21A PHD finger protein 21A 2 2
MIRT655316 PDCD11 programmed cell death 11 2 2
MIRT655375 PAX3 paired box 3 2 2
MIRT657301 HOXB5 homeobox B5 2 2
MIRT657593 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT658460 FAM117B family with sequence similarity 117 member B 2 2
MIRT658716 ELOVL4 ELOVL fatty acid elongase 4 2 2
MIRT661640 UGT2B28 UDP glucuronosyltransferase family 2 member B28 2 2
MIRT661712 MTO1 mitochondrial tRNA translation optimization 1 2 4
MIRT661833 ZNF793 zinc finger protein 793 2 2
MIRT663805 BET1L Bet1 golgi vesicular membrane trafficking protein like 2 2
MIRT663884 CXorf56 chromosome X open reading frame 56 2 2
MIRT664672 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 2
MIRT665814 TMEM168 transmembrane protein 168 2 2
MIRT668159 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT668430 FAM20B FAM20B, glycosaminoglycan xylosylkinase 2 2
MIRT672306 GP2 glycoprotein 2 2 2
MIRT673101 SYNPO2L synaptopodin 2 like 2 2
MIRT673437 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT673584 KDELC2 KDEL motif containing 2 2 2
MIRT673718 SLU7 SLU7 homolog, splicing factor 2 2
MIRT673777 MRPL17 mitochondrial ribosomal protein L17 2 2
MIRT674316 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT674820 FAM229B family with sequence similarity 229 member B 2 2
MIRT675179 BPTF bromodomain PHD finger transcription factor 2 2
MIRT675586 WWC1 WW and C2 domain containing 1 2 2
MIRT675812 MED28 mediator complex subunit 28 2 2
MIRT677632 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT683914 PSMB9 proteasome subunit beta 9 2 2
MIRT687135 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT691973 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 2 2
MIRT693078 AS3MT arsenite methyltransferase 2 2
MIRT694084 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT696292 IER3IP1 immediate early response 3 interacting protein 1 2 2
MIRT696541 C3 complement C3 2 2
MIRT701955 MITF melanogenesis associated transcription factor 2 2
MIRT703276 GNG12 G protein subunit gamma 12 2 2
MIRT706852 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT706993 XPO5 exportin 5 2 2
MIRT710716 KRTAP6-1 keratin associated protein 6-1 2 2
MIRT711305 ACOX1 acyl-CoA oxidase 1 2 2
MIRT711514 ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 2 2
MIRT711648 LIPG lipase G, endothelial type 2 2
MIRT711772 CCDC59 coiled-coil domain containing 59 2 2
MIRT714280 COQ7 coenzyme Q7, hydroxylase 2 2
MIRT715048 PRPF38A pre-mRNA processing factor 38A 2 2
MIRT716934 INCENP inner centromere protein 2 2
MIRT717220 OTUD3 OTU deubiquitinase 3 2 2
MIRT717865 BICD2 BICD cargo adaptor 2 2 2
MIRT718836 SNX20 sorting nexin 20 2 2
MIRT720243 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT721969 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 2
MIRT724000 LMTK2 lemur tyrosine kinase 2 2 2
MIRT725193 SDAD1 SDA1 domain containing 1 2 2
MIRT731669 CBL Cbl proto-oncogene 3 1
MIRT732776 AQP4 aquaporin 4 3 0
MIRT733158 ITGA5 integrin subunit alpha 5 1 0
MIRT735623 TLR4 toll like receptor 4 4 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-216a Curcumin NULL 969516 Quantitative real-time PCR Y79 RB cells. 22510010 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-216a Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-216a-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3, 2008, OVCAR10, OVCAR3, HeLa, MCF7, MDA-MB-468)
hsa-miR-216a-5p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-216a-5p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-216a-5p Doxorubicin 31703 NSC123127 approved sensitive High Small Cell Lung Cancer cell line (NCI-H69)
hsa-miR-216a-5p Sorafenib 216239 NSC747971 approved resistant Low Hepatocellular Carcinoma tissue and cell line (HepG2, Hep3B, Huh-7, PLC/PRF/5, HCCLM3, Bel-7404, HLE, SK-HEP-1, SNU-449)
hsa-miR-216a-5p Fluorouracil 3385 NSC19893 approved resistant High Colorectal Cancer tissue
hsa-miR-216a-5p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer tissue
hsa-miR-216a-5p Sorafenib 216239 NSC747971 approved resistant High Hepatocellular Carcinoma cell line (Huh-7)
hsa-miR-216a-5p Doxorubicin 31703 NSC123127 approved resistant Low Small Cell Lung Cancer cell line (H69, H446)
hsa-miR-216a-5p Cisplatin 5460033 NSC119875 approved resistant Low Ovarian Cancer cell line (SKOV3, OVCA433)
hsa-miR-216a-5p Oxaliplatin 6857599 NSC266046 approved resistant Low Gastric Cancer cell line (MGC, SGC)
hsa-miR-216a-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-216a-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-216a-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-216a-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM16)
hsa-miR-216a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM11)
hsa-miR-216a-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM17)
hsa-miR-216a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-216a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM43)
hsa-miR-216a-5p Exemestane 60198 NSC713563 approved sensitive cell line (MCF-7)
hsa-miR-216a-5p Testosterone+Tamoxifen sensitive cell line (MCF-7)
hsa-miR-216a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-miR-216a-5p Tamoxifen 2733525 NSC180973 approved sensitive cell line (TamR8)
hsa-miR-216a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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