pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol TVP23C   
Synonyms FAM18B2
Description trans-golgi network vesicle protein 23 homolog C
Transcript NM_001135036   
Other Transcripts NM_145301   
Expression
Putative miRNA Targets on TVP23C
3'UTR of TVP23C
(miRNA target sites are highlighted)
>TVP23C|NM_001135036|3'UTR
   1 TCAGTGACTAATGCAATTATTTCTAACTTTCATAGTTTAATTTTTATGAAACGCTCCTGAACAGAAGTTTTAAAGGCATA
  81 TAGTTGTATAAATATAATGATAAAGATGTTGTAATTGCTCTTTGGGGGTGTTCAAGACAGTCTGGAAGTGTATTGTCAGT
 161 ATCCTAAAATTATTTTAAAGCCAGGAAGGATAAACTATCATTGATAATAACTTATTTTTTAAAAATTACTTTTAAGTTCA
 241 GTTGTTTTTCATCAATTATGGGAGCTTTAAGTGAATGCCCTTGCAGAATGTATGTTGTATGTTTTTATTTTTATTTTTTG
 321 AGACAGAGTTTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCCCCCCGGGTTC
 401 ATGTGATTCTCCTGCCTCAGCCTTATGAGTAGCTGGGATTACAGGCGCATGCCACCACGCCCAGCTAATTTTTTGTATTT
 481 TCAGTAGAGATGGGATTTCATCATGTTAGCCAGGATGGTCTCCATCTCATGACCTTGTGATCTGCCCACCTCAGCCTCCC
 561 AAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCAGCCTGTATGTTGTATGGTTTTAGGGAGAACAGTTGAATCACAA
 641 GAAGACCATAACATTTGTACTCAGATGTTTTTTTCCCCCTAGAACATAAGGATTTTACTATAATACCTCAACATCAGGGT
 721 TTTCAGCAGGATGAGTAGTAGTCATAGGTAAATAATTATTGGTTAAATCTCTTGGGAAAAGTGACTAGGTCTTTTTTTTT
 801 TTTTTTCTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTTACTGCAAGCTCCGCC
 881 TCCCGGGTTCACGCCATTCTCCTGCATCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCGCCACCACGCCTGGCTTTTTT
 961 GTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTCCG
1041 CCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACGGCGCCTGGCCGTGACTAGGTCTTTATATGAGTAATACCTTGCAT
1121 TTGGTTAGTACAGTAGGTTGGGCAAGTGATATTATGTAGGACAGGGATTCTTAAACTCGAACATACATGAGAATCACCTA
1201 GAGGGCACAAGATTGCTGGGTTCCACCTCCAGACTCCTTATTCAGTAGATCTGGGGGTGGAGTCTCATAATTTGCATTTC
1281 TCCCAAGTTTCTGGGTGGTACTGAGGGCACTGGTCCAGGGATTACATTTTAGATAACTAAAGCCCCGAGAAATTAAATTA
1361 TTTACTTAAGATTATACAGCTAATAGTGGTACAAAGCTAGATCTTAAACCCAGCCCTCTGTACTCAAAATTTATTGTTCT
1441 TTTTATTCTACTGTACAGTTTCTCTCACAGAAGATGAAAAGTAGAGAAAATGAATATTCATGTAGGGACATGATCATCTC
1521 ATTCTGAAGGATTTTTGCATGGCTCCAATATACCTTTACTGTGGTCCACCTTAGGGTAACTTTCATGTATGTGCTTATTA
1601 GGTTTTTTTCGTTAGAATTTTCAGTGTTTCTGAAGGTGGGGAGGAACATGGAATACAGGTGAAATTAAACCTTAAACCTG
1681 GCATAACATGGATAGGGTTAGTGTCTTACATGGTATCCGGCGTCTGCTCAAATGAGACAAACTGGACAGCTGGGTGGATG
1761 ATGGTATCCATGGATTTACTTCATTAGCGCATGTCTACTTTTTTATTTATTTATTTTTTTTGAGACAGAGTCTCACTCTG
1841 TTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAACTCCACCTCCCGGGTTCATACTATTCTTCTGCCT
1921 CAGCCTCCCGAGTAGCTGGGATTGCAGGCGCCCGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTT
2001 TCACTGTGTTAGCCAGGAGGGTCTCGATCTCCTGACCTCATGATCCACCCTCCTCGGCCTCCCAAAGTGCTGGGATTACA
2081 GGTGTAAGCCACGGCGCCCAGCCTAGCATGTCTACTTTTTAATGTGATTGGGCCATTGTATGTAAGGTAATGCTCTGCTT
2161 AGAAATATAGAATGTTTTCCTAGGCCTAGGCCCCAAGTCCATGGTGTGTGAAGTGAAATAACTTTGATGTTAAGGAGTTC
2241 TTTTTTTGTCTTTTGCGGAACACTGGAGATGATCAGACTTCCTGAATAGAGAAAGCTTATGTGCTTTGTTACATTGGGGA
2321 ACAACTGAAGAGATTCTTGACTCAACCTTTTAGAGCTTAGTCCATGTTGCAACGAGGAGTGTTGGCTTTGTTTTTCCACT
2401 TAAAAACTTTATTTATAAAAAGGAAAAGTAGTTTTCATATTAAGTTTTTATTTCCTTTCCAGCAGTTGGGGCTAGAAAGT
2481 ATATGTTGGCACTAGAAACATTGTTAAGATTTGTTCTGTGGTGTAGGTATGCACATTCCATAGGTATGCACACGGCCATG
2561 TAATACCTGTATATCCCAAGTTAATGAAAGTGTTCATTTACACAGATAATGGAGACCTTTGCATTTTGATCCATAGAACA
2641 TAGGAGGATGTTCTTAGTCTGTCTCAAAGCTCTATATGTTTACATATTATTTCTGTAGATTGTTTTCAGGAGAAAGTTTT
2721 GCTTCTATGGTAAGAGTGAGCACTTTGGCTTATGTATAAGTTAGAAATAATTGTTAGTTTTTAATATGTACTTCATGGGG
2801 AAATTTCTTAGACGTATGCAAGCAAGTGAAAACAATTAGGGCCAGTGGTATTAACTACTTTATAAAATTTTATTTTTGTT
2881 TGTAAGAAGTTATCTACTTAAGGCCCAGTTAATATAAGTGGAATCATCATAGTTTAAGGAATACCCAGAGATTGCTGCTA
2961 TTCTATTTATTTTACAGAAAGGATAGCTAGATTGAAAGTTCTTCAGTGGACCTTGAGCTAATAGATCTTTTACCACTAAA
3041 AGAGCATTATTCTCATGTCATAATGAGAATAATAATTTACATACTTGGCATAATAAATGCCTAAAAGACATTTTATTTTC
3121 TGAATCTATTTTTTTCTTGCTATAATGGGGATATTGTAAATTATGCATTTGTATTAATGGTATTTCTTAAAGCAATCTAT
3201 GTAACTGTAAATTAAACCAATCTACAAACTATTGTAGGCATCTGTAAATTCTGTTGTAGGTATTATAAACTTTGTTGAAG
3281 TCTTAATCAGCAGATTATGTTGTGAATATATTTGTACATTGTTAAAATAGTTTTTAAGATTATTTGTTTAATTGAATAAG
3361 TGTCTTATTGGAGTGATAGCTTTGAAGGTGCAAAACTTTATATTTGTATAAAATTCTACTATTTACAAGGCAAAAAAAAA
3441 AAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucGGUCGGUUGAGUGUCACGUCu 5'
            :|: |||:  :: ||||||| 
Target 5' tgTCGCCCAGGCTGGAGTGCAGt 3'
337 - 359 153.00 -19.70
2
miRNA  3' ucGGUCGGUUGAGUGUCACGUCu 5'
            :|: |||:  :: ||||||| 
Target 5' tgTCGCCCAGGCTGGAGTGCAGt 3'
827 - 849 153.00 -19.70
3
miRNA  3' ucggucGGUUGAGUGUCACGUCu 5'
                |||:  :: ||||||| 
Target 5' gtttgcCCAGGCTGGAGTGCAGt 3'
1840 - 1862 149.00 -16.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30122385 1 COSMIC
COSN30456461 24 COSMIC
COSN31527311 53 COSMIC
COSN30120470 298 COSMIC
COSN6652521 392 COSMIC
COSN6099642 768 COSMIC
COSN7160829 870 COSMIC
COSN6652520 936 COSMIC
COSN31961285 1346 COSMIC
COSN31961284 1349 COSMIC
COSN19656181 1423 COSMIC
COSN6652519 1710 COSMIC
COSN5838444 2178 COSMIC
COSN15619115 2190 COSMIC
COSN508182 2195 COSMIC
COSN27000619 2239 COSMIC
COSN2534627 2240 COSMIC
COSN30748853 2240 COSMIC
COSN8866012 2240 COSMIC
COSN2382017 2257 COSMIC
COSN30541931 2274 COSMIC
COSN1081766 2276 COSMIC
COSN7812712 2283 COSMIC
COSN31583337 2286 COSMIC
COSN30490567 2312 COSMIC
COSN30157103 2327 COSMIC
COSN30471615 2363 COSMIC
COSN20121329 2386 COSMIC
COSN25172974 2387 COSMIC
COSN18740111 2408 COSMIC
COSN31554661 2428 COSMIC
COSN30127087 2483 COSMIC
COSN15236293 2533 COSMIC
COSN7160827 2643 COSMIC
COSN8602393 3219 COSMIC
COSN31529673 3268 COSMIC
COSN31541558 3328 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1327911382 4 dbSNP
rs1385650757 4 dbSNP
rs754148814 5 dbSNP
rs1339280745 8 dbSNP
rs1298402744 16 dbSNP
rs764438377 19 dbSNP
rs1340305469 22 dbSNP
rs760757243 23 dbSNP
rs947003577 30 dbSNP
rs1406460128 34 dbSNP
rs1336605105 39 dbSNP
rs1165194320 51 dbSNP
rs912916661 52 dbSNP
rs1460595950 53 dbSNP
rs1414940869 55 dbSNP
rs1053345192 59 dbSNP
rs938942258 67 dbSNP
rs1194720404 77 dbSNP
rs928785215 86 dbSNP
rs980333657 98 dbSNP
rs1184710323 99 dbSNP
rs970633573 101 dbSNP
rs374293023 103 dbSNP
rs1184759224 104 dbSNP
rs552868780 106 dbSNP
rs1398089690 110 dbSNP
rs1253464365 115 dbSNP
rs1298535502 119 dbSNP
rs1214492946 129 dbSNP
rs1393344249 138 dbSNP
rs1311359435 143 dbSNP
rs974575598 153 dbSNP
rs1234031435 162 dbSNP
rs1295598874 169 dbSNP
rs961335665 176 dbSNP
rs1334469867 178 dbSNP
rs1252272200 183 dbSNP
rs1481857885 184 dbSNP
rs1198368325 186 dbSNP
rs1256422752 187 dbSNP
rs532849179 197 dbSNP
rs1229666850 199 dbSNP
rs1308207789 212 dbSNP
rs1421344180 225 dbSNP
rs868569469 232 dbSNP
rs375378331 240 dbSNP
rs544039606 243 dbSNP
rs187068533 258 dbSNP
rs1464389621 269 dbSNP
rs1373565404 270 dbSNP
rs1171983811 287 dbSNP
rs1327006558 300 dbSNP
rs1439639502 320 dbSNP
rs1360423533 333 dbSNP
rs1382146213 338 dbSNP
rs560681469 340 dbSNP
rs545893821 353 dbSNP
rs1030576959 357 dbSNP
rs1279107315 360 dbSNP
rs1348196639 362 dbSNP
rs1212330108 365 dbSNP
rs146376616 370 dbSNP
rs1485295195 371 dbSNP
rs1462029913 374 dbSNP
rs1263827263 375 dbSNP
rs1372055064 376 dbSNP
rs1168227071 382 dbSNP
rs1172813366 383 dbSNP
rs1394633408 386 dbSNP
rs1435587208 391 dbSNP
rs11649792 392 dbSNP
rs900343428 394 dbSNP
rs1011353188 395 dbSNP
rs1364731423 395 dbSNP
rs768314292 395 dbSNP
rs1482517734 400 dbSNP
rs1372251291 401 dbSNP
rs865993814 403 dbSNP
rs558142093 411 dbSNP
rs544857972 416 dbSNP
rs576334727 417 dbSNP
rs1236032228 422 dbSNP
rs1265511219 425 dbSNP
rs891453423 426 dbSNP
rs768925190 429 dbSNP
rs1197840127 446 dbSNP
rs1215910728 447 dbSNP
rs1262378541 449 dbSNP
rs1052802788 451 dbSNP
rs1481000526 454 dbSNP
rs1253383564 457 dbSNP
rs151068598 458 dbSNP
rs536481508 459 dbSNP
rs1406123946 461 dbSNP
rs760854574 485 dbSNP
rs1045050295 488 dbSNP
rs1350705899 489 dbSNP
rs1159968232 490 dbSNP
rs1304572503 503 dbSNP
rs182427684 503 dbSNP
rs920105286 505 dbSNP
rs1325902562 512 dbSNP
rs974110634 514 dbSNP
rs1329760025 520 dbSNP
rs1330457372 522 dbSNP
rs1443628358 525 dbSNP
rs1391682452 526 dbSNP
rs568440839 529 dbSNP
rs1305665792 531 dbSNP
rs775748289 534 dbSNP
rs1308533085 538 dbSNP
rs1332107858 539 dbSNP
rs1395581145 540 dbSNP
rs1212988381 542 dbSNP
rs1172990880 544 dbSNP
rs1469633168 546 dbSNP
rs1231360527 547 dbSNP
rs908543063 562 dbSNP
rs1467812252 566 dbSNP
rs1177799603 570 dbSNP
rs1452329953 576 dbSNP
rs555073017 580 dbSNP
rs553566523 581 dbSNP
rs986802928 585 dbSNP
rs535138175 590 dbSNP
rs533771748 591 dbSNP
rs566038169 595 dbSNP
rs1353503105 614 dbSNP
rs1442463935 623 dbSNP
rs1299595012 630 dbSNP
rs1352988658 632 dbSNP
rs552605794 639 dbSNP
rs532689472 648 dbSNP
rs1336901530 662 dbSNP
rs1212525701 667 dbSNP
rs1281637495 675 dbSNP
rs7503072 679 dbSNP
rs1210866628 681 dbSNP
rs975081228 684 dbSNP
rs1254300661 685 dbSNP
rs1484702712 686 dbSNP
rs1187349824 695 dbSNP
rs570365057 700 dbSNP
rs1281644142 711 dbSNP
rs1239242839 712 dbSNP
rs1166720330 713 dbSNP
rs550089207 726 dbSNP
rs568139996 728 dbSNP
rs1410918344 730 dbSNP
rs1172062695 731 dbSNP
rs1011321558 735 dbSNP
rs1413591856 740 dbSNP
rs1312965948 742 dbSNP
rs891588840 744 dbSNP
rs1428542611 745 dbSNP
rs1375586032 753 dbSNP
rs561163995 755 dbSNP
rs1339799076 757 dbSNP
rs1031425619 764 dbSNP
rs1002505757 769 dbSNP
rs547050734 784 dbSNP
rs1210178118 791 dbSNP
rs1281111580 794 dbSNP
rs1444264672 797 dbSNP
rs1191628596 800 dbSNP
rs1242096370 806 dbSNP
rs1190946090 807 dbSNP
rs1382713901 807 dbSNP
rs1392807660 807 dbSNP
rs774282090 809 dbSNP
rs1412696128 813 dbSNP
rs1386800130 814 dbSNP
rs1158950233 815 dbSNP
rs1470609810 820 dbSNP
rs1403677768 830 dbSNP
rs527389509 831 dbSNP
rs1317490354 848 dbSNP
rs1326983401 849 dbSNP
rs146749095 852 dbSNP
rs1300996946 853 dbSNP
rs1370052493 854 dbSNP
rs1233840292 855 dbSNP
rs1180348838 860 dbSNP
rs949009397 861 dbSNP
rs1258396910 865 dbSNP
rs7502503 867 dbSNP
rs770784642 873 dbSNP
rs1448090796 874 dbSNP
rs545030086 877 dbSNP
rs576242482 878 dbSNP
rs1286735167 879 dbSNP
rs868654421 884 dbSNP
rs562830145 885 dbSNP
rs542578828 891 dbSNP
rs1379025541 892 dbSNP
rs1157485126 893 dbSNP
rs940107027 896 dbSNP
rs1458735988 901 dbSNP
rs1323883966 903 dbSNP
rs1393415556 906 dbSNP
rs749214157 910 dbSNP
rs2954739 912 dbSNP
rs1234827103 916 dbSNP
rs1304379411 917 dbSNP
rs1333081494 918 dbSNP
rs986856644 919 dbSNP
rs933980128 927 dbSNP
rs1355470822 932 dbSNP
rs191695030 936 dbSNP
rs1259620184 937 dbSNP
rs1445672361 938 dbSNP
rs139807035 939 dbSNP
rs1468276528 940 dbSNP
rs1214737359 943 dbSNP
rs1318932981 946 dbSNP
rs747798532 947 dbSNP
rs1399871917 948 dbSNP
rs1386254848 951 dbSNP
rs1363870514 955 dbSNP
rs1473309294 961 dbSNP
rs1162675932 968 dbSNP
rs1417108480 971 dbSNP
rs1461735122 974 dbSNP
rs1021463588 975 dbSNP
rs1393079862 977 dbSNP
rs1389878393 978 dbSNP
rs1328516316 979 dbSNP
rs572617367 987 dbSNP
rs1351151990 989 dbSNP
rs989941240 991 dbSNP
rs1463213435 992 dbSNP
rs558980374 996 dbSNP
rs1162762158 1000 dbSNP
rs1031396335 1004 dbSNP
rs1003053315 1008 dbSNP
rs539054988 1009 dbSNP
rs1355697962 1010 dbSNP
rs570228542 1015 dbSNP
rs1337931856 1019 dbSNP
rs1194595588 1022 dbSNP
rs1023083196 1023 dbSNP
rs550418820 1029 dbSNP
rs536556092 1030 dbSNP
rs1256637609 1031 dbSNP
rs2938157 1033 dbSNP
rs1013162417 1034 dbSNP
rs898781412 1035 dbSNP
rs547633151 1039 dbSNP
rs372266427 1040 dbSNP
rs1340921810 1053 dbSNP
rs1270680458 1066 dbSNP
rs1430013540 1075 dbSNP
rs367607369 1076 dbSNP
rs1362680403 1078 dbSNP
rs552160389 1079 dbSNP
rs1443316171 1084 dbSNP
rs527377937 1087 dbSNP
rs1051106444 1091 dbSNP
rs934095104 1092 dbSNP
rs1164408757 1101 dbSNP
rs921264921 1110 dbSNP
rs1183498326 1118 dbSNP
rs1259639709 1127 dbSNP
rs1040147154 1134 dbSNP
rs768503280 1152 dbSNP
rs1390953826 1156 dbSNP
rs1431843878 1166 dbSNP
rs564674277 1167 dbSNP
rs1403666123 1169 dbSNP
rs946739171 1170 dbSNP
rs1421825484 1176 dbSNP
rs1305058835 1183 dbSNP
rs914455073 1189 dbSNP
rs1381942347 1210 dbSNP
rs76485891 1216 dbSNP
rs1367870729 1219 dbSNP
rs113133230 1224 dbSNP
rs1302291855 1249 dbSNP
rs1312243798 1252 dbSNP
rs775419166 1254 dbSNP
rs924462182 1258 dbSNP
rs562359161 1259 dbSNP
rs1195933298 1260 dbSNP
rs1485509191 1262 dbSNP
rs1469218863 1264 dbSNP
rs1249655373 1271 dbSNP
rs981201236 1289 dbSNP
rs971589050 1294 dbSNP
rs1394728560 1296 dbSNP
rs149879978 1301 dbSNP
rs1433804944 1307 dbSNP
rs1022627442 1309 dbSNP
rs1343890212 1326 dbSNP
rs1453658683 1328 dbSNP
rs1321887138 1333 dbSNP
rs573985806 1346 dbSNP
rs1439228752 1357 dbSNP
rs1324752320 1358 dbSNP
rs962361668 1361 dbSNP
rs1273100378 1362 dbSNP
rs1213859727 1364 dbSNP
rs1304211205 1368 dbSNP
rs1315880108 1370 dbSNP
rs1228897017 1371 dbSNP
rs1339998154 1374 dbSNP
rs186889448 1377 dbSNP
rs1466931731 1378 dbSNP
rs1305305899 1380 dbSNP
rs75859327 1389 dbSNP
rs917567 1409 dbSNP
rs1488937729 1414 dbSNP
rs1193203869 1415 dbSNP
rs566542565 1416 dbSNP
rs1051236180 1417 dbSNP
rs998276400 1418 dbSNP
rs1350886801 1422 dbSNP
rs1460168257 1422 dbSNP
rs201362934 1423 dbSNP
rs1434588174 1425 dbSNP
rs1296131920 1430 dbSNP
rs899873291 1441 dbSNP
rs1039796462 1443 dbSNP
rs1290094520 1445 dbSNP
rs1329652699 1451 dbSNP
rs946678074 1453 dbSNP
rs915263260 1467 dbSNP
rs1290314544 1475 dbSNP
rs1323355958 1481 dbSNP
rs1224012559 1482 dbSNP
rs1231446179 1492 dbSNP
rs1482743661 1493 dbSNP
rs1183030717 1501 dbSNP
rs1369210331 1502 dbSNP
rs184049041 1527 dbSNP
rs1414974857 1528 dbSNP
rs538776285 1529 dbSNP
rs72819828 1532 dbSNP
rs556288895 1539 dbSNP
rs1353566378 1542 dbSNP
rs981722371 1544 dbSNP
rs1309341697 1549 dbSNP
rs1353072961 1554 dbSNP
rs1414058582 1555 dbSNP
rs1284775943 1561 dbSNP
rs1189026307 1564 dbSNP
rs536951969 1567 dbSNP
rs1232904040 1568 dbSNP
rs1271059962 1574 dbSNP
rs1203851268 1580 dbSNP
rs1341755707 1589 dbSNP
rs1206203620 1590 dbSNP
rs1481815412 1595 dbSNP
rs1282368143 1598 dbSNP
rs1276830348 1602 dbSNP
rs567661605 1603 dbSNP
rs1311328542 1605 dbSNP
rs1187447649 1607 dbSNP
rs192317717 1609 dbSNP
rs111439303 1610 dbSNP
rs186312766 1610 dbSNP
rs180935689 1611 dbSNP
rs552863459 1622 dbSNP
rs1373088508 1634 dbSNP
rs1375843812 1637 dbSNP
rs571530231 1638 dbSNP
rs1360829757 1639 dbSNP
rs1409256886 1643 dbSNP
rs1269359710 1645 dbSNP
rs1368853578 1649 dbSNP
rs747457265 1653 dbSNP
rs1229408674 1655 dbSNP
rs1315344127 1662 dbSNP
rs1300173288 1667 dbSNP
rs551421804 1670 dbSNP
rs982984491 1688 dbSNP
rs527930221 1693 dbSNP
rs1029915407 1710 dbSNP
rs1444657734 1714 dbSNP
rs1174427021 1715 dbSNP
rs758973311 1718 dbSNP
rs531315847 1719 dbSNP
rs1190094877 1721 dbSNP
rs900009116 1722 dbSNP
rs1018751493 1750 dbSNP
rs1011019042 1753 dbSNP
rs1471322200 1760 dbSNP
rs1259013107 1770 dbSNP
rs1188499018 1778 dbSNP
rs1052468447 1783 dbSNP
rs554011649 1788 dbSNP
rs139078674 1789 dbSNP
rs1369092253 1799 dbSNP
rs1232560317 1805 dbSNP
rs1045658139 1813 dbSNP
rs573526687 1814 dbSNP
rs1465581937 1817 dbSNP
rs867772094 1817 dbSNP
rs1210970100 1822 dbSNP
rs200633199 1822 dbSNP
rs991631864 1828 dbSNP
rs1247947235 1832 dbSNP
rs1468210932 1833 dbSNP
rs1382874086 1842 dbSNP
rs941144213 1846 dbSNP
rs909547425 1847 dbSNP
rs765680996 1852 dbSNP
rs1162556088 1856 dbSNP
rs374176158 1864 dbSNP
rs1030295692 1865 dbSNP
rs1324533645 1866 dbSNP
rs560473596 1867 dbSNP
rs540404070 1868 dbSNP
rs1330460784 1870 dbSNP
rs1301647695 1873 dbSNP
rs533128914 1874 dbSNP
rs1271631233 1877 dbSNP
rs977049241 1886 dbSNP
rs1210053614 1890 dbSNP
rs564138745 1893 dbSNP
rs1269042142 1894 dbSNP
rs1433309618 1895 dbSNP
rs1346230323 1897 dbSNP
rs1252388655 1898 dbSNP
rs964541721 1901 dbSNP
rs1157872888 1906 dbSNP
rs1455330686 1912 dbSNP
rs1018471929 1915 dbSNP
rs1367672246 1917 dbSNP
rs1419331226 1919 dbSNP
rs1163991467 1927 dbSNP
rs188182407 1929 dbSNP
rs1422774565 1932 dbSNP
rs576509217 1936 dbSNP
rs1351233120 1939 dbSNP
rs1412222532 1940 dbSNP
rs1311285737 1942 dbSNP
rs1340188509 1944 dbSNP
rs1245997163 1945 dbSNP
rs1188264760 1949 dbSNP
rs1486067407 1950 dbSNP
rs556513315 1951 dbSNP
rs55763007 1953 dbSNP
rs1327366872 1954 dbSNP
rs573973742 1961 dbSNP
rs1245573276 1962 dbSNP
rs185815532 1967 dbSNP
rs1046038552 1968 dbSNP
rs1311203211 1971 dbSNP
rs534237270 1972 dbSNP
rs1370365658 1980 dbSNP
rs181243759 1984 dbSNP
rs1447860518 1987 dbSNP
rs562142753 1994 dbSNP
rs558071239 1997 dbSNP
rs1431724011 1998 dbSNP
rs1301537938 2004 dbSNP
rs1366309209 2005 dbSNP
rs537942038 2012 dbSNP
rs568898425 2014 dbSNP
rs1320335133 2019 dbSNP
rs950023844 2025 dbSNP
rs548946774 2031 dbSNP
rs1315249665 2032 dbSNP
rs1363517821 2037 dbSNP
rs376129734 2040 dbSNP
rs1326225583 2043 dbSNP
rs371789548 2045 dbSNP
rs1255296104 2046 dbSNP
rs1483548531 2047 dbSNP
rs1202151554 2049 dbSNP
rs1259357868 2050 dbSNP
rs1188106979 2051 dbSNP
rs1464323295 2051 dbSNP
rs1366277388 2055 dbSNP
rs190152700 2056 dbSNP
rs1174073789 2059 dbSNP
rs941198345 2061 dbSNP
rs909599877 2065 dbSNP
rs1389269725 2079 dbSNP
rs982507106 2082 dbSNP
rs1434843217 2086 dbSNP
rs141937796 2087 dbSNP
rs1186480108 2092 dbSNP
rs1320728456 2093 dbSNP
rs1397993592 2094 dbSNP
rs929618993 2097 dbSNP
rs185273415 2104 dbSNP
rs564305898 2105 dbSNP
rs544120064 2110 dbSNP
rs531818237 2111 dbSNP
rs562869775 2115 dbSNP
rs1312301221 2120 dbSNP
rs1235315390 2123 dbSNP
rs922315275 2135 dbSNP
rs542735763 2138 dbSNP
rs1209159822 2142 dbSNP
rs977395456 2148 dbSNP
rs192809995 2149 dbSNP
rs911376398 2166 dbSNP
rs148148055 2168 dbSNP
rs147535533 2184 dbSNP
rs1373717805 2192 dbSNP
rs1410405553 2193 dbSNP
rs1457007158 2199 dbSNP
rs1160395515 2203 dbSNP
rs1391346558 2206 dbSNP
rs62072580 2215 dbSNP
rs1292649363 2216 dbSNP
rs1162180988 2224 dbSNP
rs1455952899 2227 dbSNP
rs558319241 2235 dbSNP
rs760021832 2236 dbSNP
rs1477419772 2237 dbSNP
rs774760126 2238 dbSNP
rs16940991 2240 dbSNP
rs202083949 2241 dbSNP
rs1219630797 2242 dbSNP
rs1268293834 2244 dbSNP
rs749685471 2246 dbSNP
rs766633995 2247 dbSNP
rs768312526 2248 dbSNP
rs774630238 2248 dbSNP
rs746463174 2251 dbSNP
rs779496092 2256 dbSNP
rs568909748 2257 dbSNP
rs745841375 2258 dbSNP
rs769478499 2259 dbSNP
rs1055644162 2262 dbSNP
rs778819720 2267 dbSNP
rs1322507040 2271 dbSNP
rs757073784 2272 dbSNP
rs1398023467 2274 dbSNP
rs1005312507 2275 dbSNP
rs761443681 2283 dbSNP
rs888296262 2286 dbSNP
rs753705475 2287 dbSNP
rs764350520 2288 dbSNP
rs756359933 2290 dbSNP
rs752811054 2294 dbSNP
rs767544805 2295 dbSNP
rs1410357312 2298 dbSNP
rs1442194917 2301 dbSNP
rs776352463 2308 dbSNP
rs1450028378 2311 dbSNP
rs1046779646 2312 dbSNP
rs754375308 2313 dbSNP
rs760057438 2314 dbSNP
rs1199314876 2325 dbSNP
rs774804674 2328 dbSNP
rs766897684 2334 dbSNP
rs1312228509 2338 dbSNP
rs1322575100 2344 dbSNP
rs922254019 2347 dbSNP
rs1272530534 2362 dbSNP
rs112727303 2364 dbSNP
rs758638317 2373 dbSNP
rs1471993366 2374 dbSNP
rs535557979 2379 dbSNP
rs1181666439 2382 dbSNP
rs1415043308 2386 dbSNP
rs7359507 2396 dbSNP
rs201033105 2411 dbSNP
rs878889240 2413 dbSNP
rs1166401091 2415 dbSNP
rs1369389198 2417 dbSNP
rs1429845984 2417 dbSNP
rs1483449424 2417 dbSNP
rs1357388146 2421 dbSNP
rs989745010 2422 dbSNP
rs189357584 2424 dbSNP
rs1203713268 2437 dbSNP
rs924132085 2439 dbSNP
rs1248436255 2444 dbSNP
rs1256970701 2450 dbSNP
rs539737943 2464 dbSNP
rs970872978 2465 dbSNP
rs570691049 2469 dbSNP
rs1159746705 2479 dbSNP
rs138204212 2484 dbSNP
rs1238407314 2487 dbSNP
rs1012213570 2489 dbSNP
rs1186219256 2492 dbSNP
rs114692276 2494 dbSNP
rs1449499294 2496 dbSNP
rs561935437 2499 dbSNP
rs1005446787 2504 dbSNP
rs879064615 2505 dbSNP
rs549026094 2508 dbSNP
rs529349466 2523 dbSNP
rs1334826103 2525 dbSNP
rs888266531 2534 dbSNP
rs1436519580 2543 dbSNP
rs1318742652 2546 dbSNP
rs560111226 2549 dbSNP
rs1402582222 2553 dbSNP
rs8064896 2559 dbSNP
rs578184478 2562 dbSNP
rs879222454 2568 dbSNP
rs1343043804 2570 dbSNP
rs1464389906 2571 dbSNP
rs1279972378 2572 dbSNP
rs1326017923 2580 dbSNP
rs994320331 2587 dbSNP
rs1246976236 2591 dbSNP
rs576805828 2601 dbSNP
rs8065161 2603 dbSNP
rs6502462 2606 dbSNP
rs1180582747 2614 dbSNP
rs1486955124 2628 dbSNP
rs910910744 2629 dbSNP
rs184571343 2630 dbSNP
rs1343375511 2631 dbSNP
rs1262110614 2632 dbSNP
rs936937884 2633 dbSNP
rs1228700584 2635 dbSNP
rs924099539 2657 dbSNP
rs1455403114 2660 dbSNP
rs1327801312 2664 dbSNP
rs1158122075 2674 dbSNP
rs1389163240 2675 dbSNP
rs1457966017 2676 dbSNP
rs1320598497 2684 dbSNP
rs1285936944 2685 dbSNP
rs1416499687 2693 dbSNP
rs1340958627 2694 dbSNP
rs1435856889 2695 dbSNP
rs1333481184 2716 dbSNP
rs1394051602 2721 dbSNP
rs1386947961 2722 dbSNP
rs7359511 2727 dbSNP
rs1267861014 2736 dbSNP
rs1330324696 2737 dbSNP
rs917977323 2739 dbSNP
rs991328682 2754 dbSNP
rs191363849 2756 dbSNP
rs573018840 2766 dbSNP
rs1270474651 2772 dbSNP
rs186573591 2780 dbSNP
rs952669573 2786 dbSNP
rs373817011 2788 dbSNP
rs2654282 2789 dbSNP
rs1160448587 2790 dbSNP
rs1260631381 2794 dbSNP
rs993981712 2795 dbSNP
rs1404788718 2796 dbSNP
rs1238536292 2803 dbSNP
rs1303811779 2807 dbSNP
rs1367571861 2813 dbSNP
rs1408532059 2822 dbSNP
rs901015078 2824 dbSNP
rs1351420466 2833 dbSNP
rs1019338027 2835 dbSNP
rs1282021313 2841 dbSNP
rs1007076652 2844 dbSNP
rs1441046283 2849 dbSNP
rs1210107412 2851 dbSNP
rs889443523 2857 dbSNP
rs1213768981 2865 dbSNP
rs1481822650 2869 dbSNP
rs1204282997 2879 dbSNP
rs1252458679 2880 dbSNP
rs1053485082 2882 dbSNP
rs936907703 2889 dbSNP
rs767718428 2894 dbSNP
rs539092168 2902 dbSNP
rs1464184576 2914 dbSNP
rs1265895748 2917 dbSNP
rs183132699 2925 dbSNP
rs1397871495 2926 dbSNP
rs1356503757 2927 dbSNP
rs1332577391 2928 dbSNP
rs1283519838 2935 dbSNP
rs1246248049 2936 dbSNP
rs1242517692 2938 dbSNP
rs1327923975 2939 dbSNP
rs1316734100 2949 dbSNP
rs1339362199 2953 dbSNP
rs1227073205 2960 dbSNP
rs550567876 2975 dbSNP
rs1436041724 2982 dbSNP
rs1481561497 2987 dbSNP
rs1198699998 2991 dbSNP
rs918102593 2992 dbSNP
rs2654281 2999 dbSNP
rs1354236050 3007 dbSNP
rs1442847093 3013 dbSNP
rs1388145242 3017 dbSNP
rs1318846769 3030 dbSNP
rs1407142774 3032 dbSNP
rs1168059554 3038 dbSNP
rs1373761237 3044 dbSNP
rs1463978019 3055 dbSNP
rs537361390 3057 dbSNP
rs1171400994 3063 dbSNP
rs1414710300 3066 dbSNP
rs1163117226 3078 dbSNP
rs990905572 3081 dbSNP
rs1338249851 3084 dbSNP
rs1362614104 3093 dbSNP
rs1433971194 3107 dbSNP
rs938131738 3110 dbSNP
rs1230957050 3114 dbSNP
rs1255354038 3118 dbSNP
rs1392370409 3135 dbSNP
rs867047083 3136 dbSNP
rs1345367956 3141 dbSNP
rs1189576147 3142 dbSNP
rs1245142563 3151 dbSNP
rs1463690407 3156 dbSNP
rs567868163 3164 dbSNP
rs868526702 3176 dbSNP
rs1215247213 3177 dbSNP
rs1197291635 3182 dbSNP
rs1451608876 3195 dbSNP
rs909213882 3199 dbSNP
rs1207940471 3200 dbSNP
rs1179006689 3203 dbSNP
rs984717028 3208 dbSNP
rs950727166 3218 dbSNP
rs1289146492 3227 dbSNP
rs1025487523 3231 dbSNP
rs370828921 3235 dbSNP
rs973079102 3253 dbSNP
rs1346094635 3256 dbSNP
rs1225326149 3265 dbSNP
rs1295673707 3273 dbSNP
rs1328294022 3278 dbSNP
rs1215265536 3279 dbSNP
rs1261538197 3293 dbSNP
rs1438885267 3294 dbSNP
rs1189569386 3300 dbSNP
rs1350491885 3302 dbSNP
rs1266826960 3305 dbSNP
rs538150844 3318 dbSNP
rs1403715567 3342 dbSNP
rs1410193991 3354 dbSNP
rs1472475845 3360 dbSNP
rs1372924177 3367 dbSNP
rs1419056445 3388 dbSNP
rs1019895877 3391 dbSNP
rs1292411156 3392 dbSNP
rs1365733919 3396 dbSNP
rs759251123 3400 dbSNP
rs1286399412 3406 dbSNP
rs1388706995 3415 dbSNP
rs575413351 3418 dbSNP
rs1224160333 3422 dbSNP
rs1307919075 3425 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ucggucGGUUGAGUGUCACGUCu 5'
                |||:  :: ||||||| 
Target 5' guuugcCCAGGCUGGAGUGCAGu 3'
3 - 25
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000518321.1 | 3UTR | CUGUUUGCCCAGGCUGGAGUGCAGUGGCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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