pre-miRNA Information
pre-miRNA hsa-mir-4480   
Genomic Coordinates chr10: 12578753 - 12578823
Description Homo sapiens miR-4480 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4480
Sequence 44| AGCCAAGUGGAAGUUACUUUA |64
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 10 + 12578796 23291724, 27587585 MiREDiBase
A-to-I 12 10 + 12578807 23291724, 27587585 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs929437808 7 dbSNP
rs1454494557 9 dbSNP
rs1345041659 17 dbSNP
rs561601367 21 dbSNP
Putative Targets

Gene Information
Gene Symbol TCEA1   
Synonyms GTF2S, SII, TCEA, TF2S, TFIIS
Description transcription elongation factor A1
Transcript NM_006756   
Other Transcripts NM_201437   
Expression
Putative miRNA Targets on TCEA1
3'UTR of TCEA1
(miRNA target sites are highlighted)
>TCEA1|NM_006756|3'UTR
   1 GTTGGAAGAATTGGCAAAATATCTGGACCATTAAGAAAACGGATTTTGTAACTAGCTTTAAACTAGGCCAAGCAACTAGT
  81 TTTCCTGCAAATCAAATTTTTAAAGCAACTTGGGTTAGACTTTGTTTTTGACCTAACATCCCTTCCTTAAATGCCTTCTG
 161 TAGTTTCAGATCAGTAGGGAGACCATATAATAATTTTATGGTACCTGTTTCAAAACATATTTTTTCTGTTTTTATAAGTA
 241 AGTTGATATTAATTAAACTCTTGGCAATATTTCTTCTTTCTTAAAGGAAAATATACCTTAACTTTTTTTCTTTTACACTG
 321 TGAAACATACACAGTAGAAATTCTGTTACTCTCTGTTATTAATACATAAATGAAAATACATTTTTTTCCATATTGGCATG
 401 TAGCTACAAATATTAAAGGAGGAGAAAAGGTAATATAATTTTAGGTTTACCAAATATGGTGTGTATTCAAATAATACTTG
 481 ACCAGCTTATCTAAAATGTACATAATTTTGAGGTAGCTTATGAATTTGATTTTAATTATTATGTTCACAAGCTTGGAATA
 561 TTAGATATTATTTTGCATCTGTAACTAACCGTGATCATCATTTCTTGTAATTTCTTGTACATGTATATTACTTGTTCTTA
 641 ATAGATTTTTGGAAACAAGACTTTATTGAGATCAGTTTGGTTTTCCTGTTAATTTACCTGTTTGACTTTATAATGTGTTT
 721 TAGTTTTGCAGAAGAACACTGTTGTAGTTTAGAAGGCTTTTCATAAATCCCCTCATAGGCAAAGATGAAAACTTCCCACT
 801 ATTTTTTTCCCCTCTTAGGAAGACATACTGGAAAGAAAATGTTTAGCATCTTAGTGTAGTATAGCTATTGTAAACAGTTC
 881 ATGACTAGATTTTGATTCGGAAATCTATACTGACCAAGGATTAATCTTAAGGATTGTATAATTCATTAAAGCTGTGGTCT
 961 TTCCATGTGGAGACTGATAGAAAATAATTTTGTCCCAAGTCTTATTTGCTGACTTTTTCTGTCATGAGTGAGATTGTTGA
1041 ACAAACTGAATATATGGGCTATAGCAAGTAGCTTTACAGTACAGATCTTACAATTAAGTTTTGCTTTTGTTAAAGTGTGT
1121 ACCATTTTTTCTGTTTGGAGTAAGACAAAAATTGTTTTGACATAGGTTCCCTAGGGTACACTTGCTCTAGCATACTTTAA
1201 AGGCCACTGTTGCAAAGTCTACATTTTATGCTGAATCTGCATTCTGTCAGGCACCCGTAGAAAGACCTCAGTACATGCTT
1281 TGCACTCTCCTTTGCTCCCTTTTTCCAATTTCTTATTGCATATCATTTTGTTGTAATACAGAAAGCAGCATTTTTAAATG
1361 TCCGTGTTAAGAATTGGCCCACTGGTACCAACTCACCTCTATTTTGTCAGTTCATAGTTGAAGATTTTGTTTTATTTCAA
1441 AAACAAAGTACATTTTTGAAATAATGTTTCAGAATAAAATAATCTCACTTTTAAGTGATCCATTTTAAAATTTGTAATTC
1521 AATAAAGTTTTTTTTGTTGTTAAACATATAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' auUUCAUUGAAG-GUGAACCGa 5'
            || ||:|||:  ||| ||| 
Target 5' gtAACTAGCTTTAAACTAGGCc 3'
48 - 69 131.00 -9.50
2
miRNA  3' auUUCA--UUGAA------GGUGAACCga 5'
            || |  ||:||      | ||||||  
Target 5' gcAAATCAAATTTTTAAAGCAACTTGGgt 3'
87 - 115 127.00 -7.00
3
miRNA  3' auUUCA-UUGAAGGUGAACCGa 5'
            || | ||||    |||||| 
Target 5' ttAATTAAACT----CTTGGCa 3'
249 - 266 124.00 -8.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN16203500 5 COSMIC
COSN31559799 39 COSMIC
COSN26554627 73 COSMIC
COSN31548252 237 COSMIC
COSN31492301 320 COSMIC
COSN31531358 899 COSMIC
COSN23017218 976 COSMIC
COSN31517642 1013 COSMIC
COSN2527288 1363 COSMIC
COSN15327952 1380 COSMIC
COSN8090841 1438 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs769876072 1 dbSNP
rs934471394 5 dbSNP
rs748213888 18 dbSNP
rs1475203622 22 dbSNP
rs780021580 23 dbSNP
rs1185784383 27 dbSNP
rs149396741 28 dbSNP
rs1243079659 33 dbSNP
rs1199758802 34 dbSNP
rs139352870 36 dbSNP
rs577420956 40 dbSNP
rs965985431 41 dbSNP
rs1338320545 47 dbSNP
rs1017721279 48 dbSNP
rs1468359771 49 dbSNP
rs1174802537 59 dbSNP
rs1403607047 64 dbSNP
rs1391135046 76 dbSNP
rs562365575 77 dbSNP
rs1333562963 84 dbSNP
rs1226783323 86 dbSNP
rs1378563910 88 dbSNP
rs1411259332 93 dbSNP
rs985799729 95 dbSNP
rs951909023 106 dbSNP
rs551982307 114 dbSNP
rs369903352 116 dbSNP
rs1363624029 125 dbSNP
rs1320400703 146 dbSNP
rs1257639943 154 dbSNP
rs867313314 160 dbSNP
rs1345667700 168 dbSNP
rs1194946532 176 dbSNP
rs1027380315 184 dbSNP
rs1458734904 185 dbSNP
rs1483948034 186 dbSNP
rs1183157060 187 dbSNP
rs1268497104 187 dbSNP
rs1050471 196 dbSNP
rs1178355992 202 dbSNP
rs187032325 205 dbSNP
rs1404369267 213 dbSNP
rs1372790247 215 dbSNP
rs1035275697 216 dbSNP
rs1308239808 219 dbSNP
rs1003838392 220 dbSNP
rs1189938469 221 dbSNP
rs905438031 222 dbSNP
rs1302769948 227 dbSNP
rs1331554093 228 dbSNP
rs1045501956 234 dbSNP
rs1249613391 245 dbSNP
rs1205673001 249 dbSNP
rs796138914 257 dbSNP
rs1489930769 263 dbSNP
rs946721304 269 dbSNP
rs1268125618 275 dbSNP
rs372331068 277 dbSNP
rs779324875 278 dbSNP
rs1263406359 283 dbSNP
rs934497528 283 dbSNP
rs1219708800 286 dbSNP
rs924486423 291 dbSNP
rs1321343252 297 dbSNP
rs1275516164 305 dbSNP
rs1294985095 310 dbSNP
rs1390823199 315 dbSNP
rs1381201391 316 dbSNP
rs1295285220 317 dbSNP
rs1367298099 331 dbSNP
rs1230717800 334 dbSNP
rs1314116965 336 dbSNP
rs1357483519 337 dbSNP
rs1224039240 339 dbSNP
rs1266299500 345 dbSNP
rs1485569888 349 dbSNP
rs781782500 350 dbSNP
rs1203489042 355 dbSNP
rs1340058329 372 dbSNP
rs975879119 381 dbSNP
rs1387802017 383 dbSNP
rs944648864 385 dbSNP
rs1370237870 388 dbSNP
rs1292115044 389 dbSNP
rs1435400574 390 dbSNP
rs910450289 390 dbSNP
rs1166434208 403 dbSNP
rs1368734726 404 dbSNP
rs986216605 418 dbSNP
rs544649587 429 dbSNP
rs1370776061 430 dbSNP
rs1317997532 434 dbSNP
rs1170037324 436 dbSNP
rs1435746486 442 dbSNP
rs1336073776 445 dbSNP
rs1376655168 449 dbSNP
rs1229865835 453 dbSNP
rs951714471 456 dbSNP
rs1316586739 457 dbSNP
rs1027416248 459 dbSNP
rs1270103958 481 dbSNP
rs971770806 483 dbSNP
rs961790070 486 dbSNP
rs1388970361 492 dbSNP
rs1035222784 497 dbSNP
rs970068998 498 dbSNP
rs1418157992 502 dbSNP
rs1156249763 503 dbSNP
rs1413519507 505 dbSNP
rs11085 506 dbSNP
rs1023865874 520 dbSNP
rs1175583740 521 dbSNP
rs1011337783 522 dbSNP
rs771499477 543 dbSNP
rs1434814950 546 dbSNP
rs1265055953 550 dbSNP
rs1052382940 552 dbSNP
rs1290517581 568 dbSNP
rs1190395512 569 dbSNP
rs1329900035 570 dbSNP
rs1223036588 573 dbSNP
rs1277063281 580 dbSNP
rs999598558 582 dbSNP
rs1232680224 590 dbSNP
rs901251340 591 dbSNP
rs11550741 593 dbSNP
rs1179527209 605 dbSNP
rs1040206790 607 dbSNP
rs1472602743 609 dbSNP
rs944530603 614 dbSNP
rs1422893532 616 dbSNP
rs1207511893 620 dbSNP
rs574381126 621 dbSNP
rs11550739 628 dbSNP
rs1427626623 630 dbSNP
rs1310061404 634 dbSNP
rs1351364116 635 dbSNP
rs1234650618 638 dbSNP
rs1404368975 642 dbSNP
rs1273161622 645 dbSNP
rs1314458727 664 dbSNP
rs1220307492 672 dbSNP
rs930309937 691 dbSNP
rs1340446285 695 dbSNP
rs544343658 702 dbSNP
rs575437463 709 dbSNP
rs1309506838 715 dbSNP
rs1220109953 726 dbSNP
rs1244461786 730 dbSNP
rs1478763170 742 dbSNP
rs1407563562 743 dbSNP
rs971717140 750 dbSNP
rs1447385724 752 dbSNP
rs1170289193 753 dbSNP
rs1371330733 754 dbSNP
rs961821058 762 dbSNP
rs1321898557 768 dbSNP
rs927681136 771 dbSNP
rs1437337322 772 dbSNP
rs1270072780 776 dbSNP
rs1363681583 783 dbSNP
rs1230982617 785 dbSNP
rs1467573038 797 dbSNP
rs982707217 801 dbSNP
rs1227380460 811 dbSNP
rs1287347708 813 dbSNP
rs1452812902 814 dbSNP
rs1247299392 828 dbSNP
rs1175188366 834 dbSNP
rs969554732 838 dbSNP
rs1024316250 849 dbSNP
rs1413834074 853 dbSNP
rs1011196560 856 dbSNP
rs1482177468 867 dbSNP
rs1161651033 877 dbSNP
rs1249989294 881 dbSNP
rs958274422 886 dbSNP
rs1405981923 887 dbSNP
rs558668905 898 dbSNP
rs1437882986 899 dbSNP
rs1484245595 909 dbSNP
rs1382457778 913 dbSNP
rs546416515 927 dbSNP
rs1243134813 942 dbSNP
rs1282015509 943 dbSNP
rs1254774020 952 dbSNP
rs181441823 970 dbSNP
rs1228328932 972 dbSNP
rs1330271836 981 dbSNP
rs1266958189 984 dbSNP
rs1290575787 989 dbSNP
rs1210512803 992 dbSNP
rs1248614356 1000 dbSNP
rs1226234286 1001 dbSNP
rs1441579772 1003 dbSNP
rs1185176594 1004 dbSNP
rs754837321 1024 dbSNP
rs1312914255 1025 dbSNP
rs1409841545 1035 dbSNP
rs1041104540 1048 dbSNP
rs1397273820 1050 dbSNP
rs1160523499 1061 dbSNP
rs1009152386 1070 dbSNP
rs1394610989 1077 dbSNP
rs1336565192 1083 dbSNP
rs1341835162 1091 dbSNP
rs1448287372 1099 dbSNP
rs554450353 1112 dbSNP
rs1302214640 1124 dbSNP
rs1457683710 1131 dbSNP
rs1390611096 1132 dbSNP
rs1156676978 1133 dbSNP
rs1348057515 1133 dbSNP
rs534185784 1134 dbSNP
rs1363455061 1137 dbSNP
rs1050685146 1138 dbSNP
rs1188430166 1141 dbSNP
rs1344219317 1142 dbSNP
rs1198454304 1165 dbSNP
rs1442853934 1176 dbSNP
rs1425666910 1185 dbSNP
rs930583650 1186 dbSNP
rs920500150 1204 dbSNP
rs568457849 1210 dbSNP
rs1465721635 1218 dbSNP
rs1377497445 1221 dbSNP
rs1464996897 1243 dbSNP
rs940315380 1245 dbSNP
rs1270495995 1252 dbSNP
rs1207232125 1255 dbSNP
rs927712167 1256 dbSNP
rs147680453 1257 dbSNP
rs1307005598 1270 dbSNP
rs1348271278 1271 dbSNP
rs969541065 1274 dbSNP
rs1288441106 1275 dbSNP
rs74465695 1278 dbSNP
rs1330059169 1287 dbSNP
rs1230968499 1296 dbSNP
rs1276585686 1304 dbSNP
rs537828117 1308 dbSNP
rs1204206357 1311 dbSNP
rs1272706297 1316 dbSNP
rs1484162461 1320 dbSNP
rs1205890826 1324 dbSNP
rs1266747061 1329 dbSNP
rs916787981 1332 dbSNP
rs1378771992 1339 dbSNP
rs1449195470 1351 dbSNP
rs990041367 1363 dbSNP
rs569045569 1364 dbSNP
rs1431236678 1367 dbSNP
rs1298456574 1372 dbSNP
rs1031188355 1374 dbSNP
rs1435806743 1376 dbSNP
rs374323951 1379 dbSNP
rs1050523 1381 dbSNP
rs965313942 1383 dbSNP
rs1295149090 1386 dbSNP
rs532385872 1390 dbSNP
rs1229408528 1391 dbSNP
rs1265128204 1392 dbSNP
rs1487536301 1394 dbSNP
rs1211740106 1398 dbSNP
rs151264761 1401 dbSNP
rs889862330 1406 dbSNP
rs1187286458 1416 dbSNP
rs546885612 1428 dbSNP
rs1450522674 1438 dbSNP
rs1170679853 1440 dbSNP
rs1367552470 1443 dbSNP
rs1455899122 1452 dbSNP
rs1164072905 1456 dbSNP
rs189457888 1464 dbSNP
rs1366839591 1469 dbSNP
rs1318539557 1483 dbSNP
rs1367057832 1484 dbSNP
rs1382623312 1500 dbSNP
rs1312224321 1510 dbSNP
rs1183061194 1512 dbSNP
rs1450705122 1513 dbSNP
rs1266092408 1515 dbSNP
rs1328655752 1524 dbSNP
rs1207349800 1536 dbSNP
rs1250492869 1536 dbSNP
rs1250448937 1544 dbSNP
rs1187178585 1545 dbSNP
rs1446806116 1547 dbSNP
rs1465589741 1547 dbSNP
rs1268462669 1548 dbSNP
rs1254967340 1549 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' auUUCA-UUGAAGGUGAACCGa 5'
            || | ||||    |||||| 
Target 5' uuAAUUAAACU----CUUGGCa 3'
9 - 26
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000396401.3 | 3UTR | AGUUGAUAUUAAUUAAACUCUUGGCAAUAUUUCUUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
117 hsa-miR-4480 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT056040 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT091259 FXR1 FMR1 autosomal homolog 1 2 4
MIRT117347 MAPRE2 microtubule associated protein RP/EB family member 2 2 2
MIRT234960 ZNF439 zinc finger protein 439 2 4
MIRT441356 ZNF75A zinc finger protein 75a 2 2
MIRT441426 STXBP2 syntaxin binding protein 2 2 2
MIRT441455 ZNF488 zinc finger protein 488 2 4
MIRT441524 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT441576 EXOC5 exocyst complex component 5 2 2
MIRT441597 ABCB5 ATP binding cassette subfamily B member 5 2 6
MIRT441610 ATP13A4 ATPase 13A4 2 2
MIRT441698 CIT citron rho-interacting serine/threonine kinase 2 2
MIRT441714 FGF9 fibroblast growth factor 9 2 2
MIRT441784 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT441795 EXOSC2 exosome component 2 2 2
MIRT441868 RNASEL ribonuclease L 2 2
MIRT441900 SLC9A8 solute carrier family 9 member A8 2 6
MIRT441919 FAM217B family with sequence similarity 217 member B 2 2
MIRT441928 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT441938 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT442157 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT442172 AZF1 azoospermia factor 1 2 2
MIRT442208 IRS1 insulin receptor substrate 1 2 2
MIRT442237 DDX19A DEAD-box helicase 19A 2 2
MIRT442366 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442572 SDC1 syndecan 1 2 2
MIRT442604 ZNF391 zinc finger protein 391 2 2
MIRT442609 MRC1 mannose receptor C-type 1 2 2
MIRT442647 POP4 POP4 homolog, ribonuclease P/MRP subunit 2 2
MIRT442658 OIP5 Opa interacting protein 5 2 6
MIRT442686 COX15 COX15, cytochrome c oxidase assembly homolog 2 2
MIRT442773 JAG1 jagged 1 2 2
MIRT442785 CHD8 chromodomain helicase DNA binding protein 8 2 2
MIRT442895 PLCB3 phospholipase C beta 3 2 2
MIRT442941 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT442959 SGCD sarcoglycan delta 2 2
MIRT442998 EDAR ectodysplasin A receptor 2 2
MIRT443017 C21orf91 chromosome 21 open reading frame 91 2 2
MIRT443064 CASP5 caspase 5 2 2
MIRT443069 ABLIM1 actin binding LIM protein 1 2 2
MIRT443208 VPS36 vacuolar protein sorting 36 homolog 2 2
MIRT443237 ANKRD26 ankyrin repeat domain 26 2 2
MIRT443253 A1CF APOBEC1 complementation factor 2 2
MIRT443329 JUN Jun proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT443333 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT443349 STX7 syntaxin 7 2 2
MIRT443452 CLIC5 chloride intracellular channel 5 2 2
MIRT443547 GPR35 G protein-coupled receptor 35 2 2
MIRT443616 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT443626 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT443730 ALPK3 alpha kinase 3 2 2
MIRT443786 ST13 ST13, Hsp70 interacting protein 2 2
MIRT443852 RGS6 regulator of G protein signaling 6 2 2
MIRT445483 KLF5 Kruppel like factor 5 2 2
MIRT471105 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT472329 NETO2 neuropilin and tolloid like 2 2 4
MIRT472391 NDRG3 NDRG family member 3 2 2
MIRT473522 MAX MYC associated factor X 2 2
MIRT473874 MAFK MAF bZIP transcription factor K 2 6
MIRT476021 GTF2A1 general transcription factor IIA subunit 1 2 2
MIRT478320 DDN dendrin 2 2
MIRT492049 TNFSF9 TNF superfamily member 9 2 2
MIRT494851 ANKRD24 ankyrin repeat domain 24 2 2
MIRT494991 TSSC1 EARP complex and GARP complex interacting protein 1 2 2
MIRT495034 RASSF2 Ras association domain family member 2 2 2
MIRT495111 NOL10 nucleolar protein 10 2 2
MIRT495113 TRADD TNFRSF1A associated via death domain 2 2
MIRT495131 METTL24 methyltransferase like 24 2 2
MIRT495147 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT495297 NUP54 nucleoporin 54 2 2
MIRT495341 RTN2 reticulon 2 2 2
MIRT495347 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT496682 DUSP18 dual specificity phosphatase 18 2 2
MIRT496743 TGFBR1 transforming growth factor beta receptor 1 2 2
MIRT496841 KCNIP2 potassium voltage-gated channel interacting protein 2 2 2
MIRT496852 GPAM glycerol-3-phosphate acyltransferase, mitochondrial 2 2
MIRT496889 FOXP1 forkhead box P1 2 2
MIRT496922 CLMN calmin 2 2
MIRT496990 TMEM231 transmembrane protein 231 2 2
MIRT497002 SNAP25 synaptosome associated protein 25 2 2
MIRT497058 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT500529 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 6
MIRT506048 PPP6C protein phosphatase 6 catalytic subunit 2 4
MIRT512163 CD164 CD164 molecule 2 6
MIRT527051 RDH13 retinol dehydrogenase 13 2 2
MIRT532282 TNFSF14 TNF superfamily member 14 2 2
MIRT534083 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT534605 RNASEH1 ribonuclease H1 2 4
MIRT539509 ACSS3 acyl-CoA synthetase short chain family member 3 2 2
MIRT543069 ARID4B AT-rich interaction domain 4B 2 2
MIRT544233 CCBL2 kynurenine aminotransferase 3 2 2
MIRT544686 ZNF224 zinc finger protein 224 2 4
MIRT546269 TMEM30A transmembrane protein 30A 2 4
MIRT559069 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT562768 RMI2 RecQ mediated genome instability 2 2 2
MIRT563974 HCFC1 host cell factor C1 2 2
MIRT564086 NSA2 NSA2, ribosome biogenesis homolog 2 2
MIRT564525 PDXP pyridoxal phosphatase 2 2
MIRT564613 ZNF703 zinc finger protein 703 2 2
MIRT566252 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT614420 ZNF440 zinc finger protein 440 2 2
MIRT618789 MTHFR methylenetetrahydrofolate reductase 2 2
MIRT619160 PPDPF pancreatic progenitor cell differentiation and proliferation factor 2 2
MIRT641778 ZDHHC7 zinc finger DHHC-type containing 7 2 4
MIRT653680 SLC25A36 solute carrier family 25 member 36 2 2
MIRT657861 GJD2 gap junction protein delta 2 2 2
MIRT660879 ADCYAP1R1 ADCYAP receptor type I 2 2
MIRT668781 DAAM1 dishevelled associated activator of morphogenesis 1 2 4
MIRT688559 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT695393 WDR41 WD repeat domain 41 2 2
MIRT698680 TCEA1 transcription elongation factor A1 2 2
MIRT700974 PDIA6 protein disulfide isomerase family A member 6 2 2
MIRT705055 C5orf15 chromosome 5 open reading frame 15 2 2
MIRT705864 AFF1 AF4/FMR2 family member 1 2 2
MIRT710586 CDCA4 cell division cycle associated 4 2 2
MIRT713904 IGF2R insulin like growth factor 2 receptor 2 2
MIRT717133 SKI SKI proto-oncogene 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved resistant cell line (A549)

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