pre-miRNA Information
pre-miRNA hsa-mir-6867   
Genomic Coordinates chr17: 40193597 - 40193663
Description Homo sapiens miR-6867 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6867-3p
Sequence 47| CUCUCCCUCUUUACCCACUAG |67
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM7811173 21 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1403216522 1 dbSNP
rs781776276 3 dbSNP
rs202050374 4 dbSNP
rs367842831 5 dbSNP
rs1223489976 6 dbSNP
rs907256096 9 dbSNP
rs753257137 14 dbSNP
rs757843554 17 dbSNP
rs371369162 18 dbSNP
Putative Targets

Gene Information
Gene Symbol SPATA2   
Synonyms PD1, PPP1R145, tamo
Description spermatogenesis associated 2
Transcript NM_001135773   
Other Transcripts NM_006038   
Expression
Putative miRNA Targets on SPATA2
3'UTR of SPATA2
(miRNA target sites are highlighted)
>SPATA2|NM_001135773|3'UTR
   1 ACCGGCCTCGCCCCTTCCAGCTCCAAGGGCTACATCAACCGACCTTTCGGGTTTCACGGTGAAGAAGTACTAACGCATTG
  81 ATCTCAGAGGCGGAGGCCTGCACTTGACCATGTAGGTGGCAGAGATCGTGGGCTGGCTGTGTCCACGTGGGAGTTCACTT
 161 AGCGACTCAGATATCTCAACCAATGGCTGCTTTGTTGTCTGACAAGGGAGAAGGTGGCACTTCCGTTCAGATTCATTTTG
 241 CTAATCTCTCCACTCCCTGTTCAGTTGGTTCTTTTTTTGGGGTTTTGTTTTGTTTTGTTTTGTTGTTTTGTTTTTTCCTT
 321 TAAAGAGGATTTCTGTCTCTGGGACCCTCGCTGCACCTACCCCTCCCATTGCAAAGCCAACTTGGACTGGGAAGGGCCCT
 401 TCAGGTCACCAAACATCCACCTGGAGCGGCGAGCTAGAGGCCTGTTGGCTTGTGAAATGAGCCCTCCTGCCACACGGGGC
 481 CTCTCCCAAAGGCTCATCCCTTGGCCGCCCCCTTCCTAAACACAAGGATCCCCAGCTGGACTCCCCACCCCCTGGCTTCC
 561 CCACCTCTCCAGGTGTCAAAGGTGAACCGAGTCCAGTATTAGCTGAATGTCATTTCGTACACCACAGCTCAGTCAGCCCA
 641 TGGCCTTCGTGAACTTTGCTCCAACACACTGATGTGTGGGCTTCCCACAGCAGGACTGACTTCCCCCTTTCTGTTGTTTG
 721 CACATGCCCCTCTTACTGTACTGTCAATAGATATTTTTGAGATTTATTTTTAAATAAATATTCAACTTGCTGTGTGTTTC
 801 AACGTGGTTAAAAAAATGAATTATGTAGCTATTTATTAAATGCCCTGGGTTCTTTAGTCTTCCAAGGGAGGGCCTCGCGC
 881 CCATTCGTGTTGTATCCTCCACTCACTATGGCCCGAGGGGAGAGGAGAGTTTGGGGCAGGGAGGAACAGACATGAAGCCT
 961 CCTTTTCTTGAGCTGGTGGAGAGCCACTGTCTTCCCTGCAGTAACTATCTATACACCTACCTCCAGTGTGCACTTAGGGG
1041 GTGAGCGCGGGTGTCGAGGTCTGTGTGTCTGCAGACTGCTAACCTATGACAATTCAGGGACCTCACCTGTCGGACCTATA
1121 GCTTGCTGAGCAGGAACCTTGCACTTCACACTTCTTGAGTCTCGTTTCAGAAGGAAAATCATTTGGGATTCCTACTGCCC
1201 CTCCATCTCAATCCTCTTCTCTTCACCAGTTTCCAGGACTCATCTGCAACATTTGCAATCTTTTTGCACTAAAAGTGGGC
1281 AGGAGTCGGCATGTGCCCATCAGAGAGACGGCTCCTCAGATGCTCAGCTAAGCCTAAGCGCTTCCAAGCCTGAAGGCCCC
1361 TTCAGCTTCTCATGTGAATTACCAACCCCTGGATTTTCCTTGTGGGGGTACAAGAGCAGGAGTGGGGCAAGAGTTTGAAA
1441 ATAAAGCCGCTTCCTTGTGAACTAACTATATTTTAGCCATAACTGTTTGTGATGTACACAATGTTAAGGGATTTATATGC
1521 AGTGGGCTTTTCTGGGAGAAAGTTATTCAGCTCTTGAGCAAGTTTAAGTCTGGCTGAATCCTGAGGCCACTGTGAATTTG
1601 CTGATGTTCTTCCAACTCAGTTGAGTGATTTTAAGGTTTTCCAAATCTTCTATGGCTCTCTTTTTAATATATATATATAT
1681 ATATATATATATATATATATATATATATATATATATCTATCTGGTAGATCACATGTAGATGTACAGTGTGTATATTAAGC
1761 TGAATTTCAACCAACTTTATTACTAAGACCAGCCTAGCAGGGCATTCATCTTTGATGTTCTTCCTTTTCACATTTCAGAA
1841 TCGGCAATGCCTGGCCCACTCCTGAGAGCTCTAGTTTTCTAGTTTTCCATTTCCAGATTGCGCCAGCATTACAGTAACTA
1921 ACTCTTTCTAACCAACCGTGATGCCACGTAACTTACCCTATGGACAAAAGCAGGAATGACTAACACATCCTAGGAGGGAA
2001 AGTCCAGTGTACCTGTCATCACGGACGCACTGTGGTCACAGACTGGAATACGAAATACTACAGCCCTGCTCCCAGGTGTG
2081 CATCTTACTGGATGAGGTTGCTGTGATTGAGATAGTTAAATACATGCTAATTTAAAAATGCAGATGTTTTACATTTGATT
2161 TCTACCAAGAGTTGAAATGTTGAGAGATGATTAAAAATAATAATAATAAAGTGTCTTCCATTGTTAAAAAAAAAAAAAAA
2241 AAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaucACCCAUUUCUCCCUCUc 5'
              ||  |:|  ||||||| 
Target 5' ttgtTGTCTGACAAGGGAGAa 3'
192 - 212 149.00 -9.80
2
miRNA  3' gaUCACCCAUUUC-UCCCUCUc 5'
            || |  |:::| ||||||: 
Target 5' ggAGAGTTTGGGGCAGGGAGGa 3'
924 - 945 135.00 -15.00
3
miRNA  3' gaucacccauuucUCCCUCUc 5'
                       ||||||: 
Target 5' ctttagtcttccaAGGGAGGg 3'
852 - 872 124.00 -14.04
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN5973129 10 COSMIC
COSN26996473 18 COSMIC
COSN30110561 20 COSMIC
COSN26996472 40 COSMIC
COSN30456848 44 COSMIC
COSN19727926 48 COSMIC
COSN31605597 58 COSMIC
COSN31480298 74 COSMIC
COSN30127827 75 COSMIC
COSN25864606 182 COSMIC
COSN28195517 212 COSMIC
COSN31563730 221 COSMIC
COSN31486334 225 COSMIC
COSN31548551 271 COSMIC
COSN28794100 347 COSMIC
COSN30158118 385 COSMIC
COSN16837434 454 COSMIC
COSN31537225 567 COSMIC
COSN31591652 617 COSMIC
COSN27778815 696 COSMIC
COSN21260421 747 COSMIC
COSN1874956 754 COSMIC
COSN31579910 790 COSMIC
COSN31567840 957 COSMIC
COSN31579227 982 COSMIC
COSN26637276 1021 COSMIC
COSN26565164 1046 COSMIC
COSN22544822 1055 COSMIC
COSN31549863 1116 COSMIC
COSN29799883 1127 COSMIC
COSN22824893 1151 COSMIC
COSN28637348 1242 COSMIC
COSN8611089 1258 COSMIC
COSN30158074 1392 COSMIC
COSN28672917 1546 COSMIC
COSN31535976 1584 COSMIC
COSN31585840 1630 COSMIC
COSN30177145 1717 COSMIC
COSN1874955 1743 COSMIC
COSN17075938 1901 COSMIC
COSN30045393 2130 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1340166841 2 dbSNP
rs368987643 3 dbSNP
rs761824285 4 dbSNP
rs776753861 9 dbSNP
rs763948942 10 dbSNP
rs370083864 12 dbSNP
rs1038538247 17 dbSNP
rs1312857722 17 dbSNP
rs1374224973 18 dbSNP
rs1462077515 25 dbSNP
rs760448631 28 dbSNP
rs1390281777 30 dbSNP
rs78700554 32 dbSNP
rs372807777 33 dbSNP
rs749344608 38 dbSNP
rs369517904 39 dbSNP
rs140701865 40 dbSNP
rs1042299634 41 dbSNP
rs199937249 42 dbSNP
rs201605879 46 dbSNP
rs781712557 47 dbSNP
rs755355960 48 dbSNP
rs531849560 49 dbSNP
rs779719130 50 dbSNP
rs772879252 51 dbSNP
rs901642373 52 dbSNP
rs991343808 56 dbSNP
rs1038849777 57 dbSNP
rs925745440 58 dbSNP
rs1337445397 59 dbSNP
rs977271671 62 dbSNP
rs1263467562 73 dbSNP
rs967653278 74 dbSNP
rs943092531 75 dbSNP
rs1177851078 78 dbSNP
rs1428572578 83 dbSNP
rs563460623 85 dbSNP
rs551316980 91 dbSNP
rs1008343064 92 dbSNP
rs1049310316 96 dbSNP
rs1405721560 107 dbSNP
rs1468589996 120 dbSNP
rs1290833090 123 dbSNP
rs533255800 127 dbSNP
rs1381721776 128 dbSNP
rs1488951918 136 dbSNP
rs1332924217 146 dbSNP
rs867729618 156 dbSNP
rs955329116 163 dbSNP
rs559431271 164 dbSNP
rs1215757892 169 dbSNP
rs1262087537 171 dbSNP
rs997467618 174 dbSNP
rs1204021020 180 dbSNP
rs541328829 183 dbSNP
rs1490698075 190 dbSNP
rs898740684 194 dbSNP
rs1348376632 195 dbSNP
rs1479644196 197 dbSNP
rs1161819534 199 dbSNP
rs1282173625 204 dbSNP
rs1453256768 213 dbSNP
rs192359287 216 dbSNP
rs376995025 224 dbSNP
rs551153495 225 dbSNP
rs755505358 225 dbSNP
rs569575888 240 dbSNP
rs35214668 244 dbSNP
rs1221456555 246 dbSNP
rs1308954722 249 dbSNP
rs866949279 252 dbSNP
rs949823277 252 dbSNP
rs1237797303 267 dbSNP
rs1258616016 271 dbSNP
rs74928591 278 dbSNP
rs750634249 285 dbSNP
rs925887494 286 dbSNP
rs1490020642 290 dbSNP
rs999379579 297 dbSNP
rs1251611203 300 dbSNP
rs1157126454 302 dbSNP
rs1418896401 302 dbSNP
rs146567868 305 dbSNP
rs72060824 305 dbSNP
rs755921514 305 dbSNP
rs879648024 305 dbSNP
rs945886856 305 dbSNP
rs911740634 308 dbSNP
rs1298159778 322 dbSNP
rs1299818108 325 dbSNP
rs1373735642 328 dbSNP
rs1390654860 335 dbSNP
rs967402304 342 dbSNP
rs1030076524 345 dbSNP
rs73611743 347 dbSNP
rs1290330662 348 dbSNP
rs901779630 349 dbSNP
rs1038817572 350 dbSNP
rs1007331047 357 dbSNP
rs887637197 360 dbSNP
rs1252432242 363 dbSNP
rs1048798409 365 dbSNP
rs929088646 368 dbSNP
rs539690644 369 dbSNP
rs1017173627 371 dbSNP
rs1045433897 373 dbSNP
rs572688299 376 dbSNP
rs1478535436 379 dbSNP
rs950252639 380 dbSNP
rs1411757927 391 dbSNP
rs1172383088 404 dbSNP
rs916185277 406 dbSNP
rs887254823 410 dbSNP
rs1485952330 412 dbSNP
rs1024432811 416 dbSNP
rs761944793 417 dbSNP
rs1452832785 418 dbSNP
rs776872707 423 dbSNP
rs936145692 427 dbSNP
rs1013927760 428 dbSNP
rs926153632 430 dbSNP
rs767501027 431 dbSNP
rs1202845319 445 dbSNP
rs1265323852 453 dbSNP
rs1252136976 461 dbSNP
rs1055988687 466 dbSNP
rs554128223 475 dbSNP
rs1316193682 476 dbSNP
rs1476415793 487 dbSNP
rs1277627982 498 dbSNP
rs1187256050 503 dbSNP
rs536156152 506 dbSNP
rs759546457 507 dbSNP
rs1427790947 521 dbSNP
rs1168456807 522 dbSNP
rs568433712 527 dbSNP
rs1470147280 528 dbSNP
rs964039231 530 dbSNP
rs1335650257 538 dbSNP
rs1357106111 539 dbSNP
rs945971658 540 dbSNP
rs1017463309 541 dbSNP
rs1397612054 546 dbSNP
rs1285788192 547 dbSNP
rs987311131 547 dbSNP
rs1007467045 548 dbSNP
rs931842000 551 dbSNP
rs1216789934 552 dbSNP
rs1241523582 561 dbSNP
rs887617852 571 dbSNP
rs1484954188 587 dbSNP
rs1431423344 588 dbSNP
rs1467010335 589 dbSNP
rs1480621189 590 dbSNP
rs1175522273 594 dbSNP
rs1422600665 610 dbSNP
rs145716977 616 dbSNP
rs149759784 617 dbSNP
rs774220081 624 dbSNP
rs1045402378 626 dbSNP
rs962715212 626 dbSNP
rs1369675518 628 dbSNP
rs949685905 634 dbSNP
rs1422842790 638 dbSNP
rs1353296437 643 dbSNP
rs1224507004 644 dbSNP
rs1250828669 648 dbSNP
rs894179216 649 dbSNP
rs1056054941 656 dbSNP
rs1270950370 668 dbSNP
rs936252959 669 dbSNP
rs188653657 674 dbSNP
rs1198088597 685 dbSNP
rs1244695116 701 dbSNP
rs551546251 703 dbSNP
rs978003701 706 dbSNP
rs1214850402 708 dbSNP
rs1164997854 713 dbSNP
rs1359135541 714 dbSNP
rs894668710 724 dbSNP
rs1034087543 725 dbSNP
rs1337858415 731 dbSNP
rs1244195643 736 dbSNP
rs1375038019 736 dbSNP
rs1248244008 747 dbSNP
rs1336526163 754 dbSNP
rs1309435930 771 dbSNP
rs532944788 779 dbSNP
rs1000364560 781 dbSNP
rs1374372938 781 dbSNP
rs922668851 783 dbSNP
rs1439314788 785 dbSNP
rs1182305722 788 dbSNP
rs1041777601 793 dbSNP
rs117048543 799 dbSNP
rs890370147 802 dbSNP
rs75488771 803 dbSNP
rs931791100 804 dbSNP
rs1161958658 812 dbSNP
rs550066478 816 dbSNP
rs1410877842 817 dbSNP
rs1018272250 823 dbSNP
rs1160902582 824 dbSNP
rs985973625 827 dbSNP
rs952064855 829 dbSNP
rs941446091 846 dbSNP
rs1180120219 849 dbSNP
rs909852055 852 dbSNP
rs779702791 855 dbSNP
rs769471908 858 dbSNP
rs539274691 862 dbSNP
rs1196324076 865 dbSNP
rs1257119353 869 dbSNP
rs993756820 874 dbSNP
rs983182588 876 dbSNP
rs1243431610 877 dbSNP
rs897682523 878 dbSNP
rs1024052265 879 dbSNP
rs1014051306 881 dbSNP
rs1453792825 883 dbSNP
rs372037456 886 dbSNP
rs917479312 887 dbSNP
rs1337611318 892 dbSNP
rs6125807 894 dbSNP
rs1000421471 899 dbSNP
rs1351497706 902 dbSNP
rs1394359180 905 dbSNP
rs747612306 906 dbSNP
rs372748991 914 dbSNP
rs1327109883 915 dbSNP
rs1228014936 920 dbSNP
rs1277516106 921 dbSNP
rs1315815946 948 dbSNP
rs958833996 951 dbSNP
rs1263370404 960 dbSNP
rs543042067 965 dbSNP
rs1238225683 972 dbSNP
rs1198382147 982 dbSNP
rs1263137062 983 dbSNP
rs946195698 985 dbSNP
rs1353317038 986 dbSNP
rs1261713468 987 dbSNP
rs1481604575 997 dbSNP
rs13043581 1001 dbSNP
rs1177686774 1004 dbSNP
rs780695401 1007 dbSNP
rs76515540 1008 dbSNP
rs1020066800 1013 dbSNP
rs1009888493 1026 dbSNP
rs1297473937 1037 dbSNP
rs942792432 1038 dbSNP
rs1311390780 1039 dbSNP
rs996114894 1046 dbSNP
rs1262143853 1047 dbSNP
rs879036765 1048 dbSNP
rs1386208577 1049 dbSNP
rs984542215 1050 dbSNP
rs1491000181 1051 dbSNP
rs900295434 1052 dbSNP
rs866623337 1055 dbSNP
rs564064936 1056 dbSNP
rs1184226901 1059 dbSNP
rs972039910 1065 dbSNP
rs1419171275 1067 dbSNP
rs375016557 1072 dbSNP
rs1174601230 1074 dbSNP
rs1156996249 1086 dbSNP
rs1367548192 1088 dbSNP
rs529632181 1090 dbSNP
rs545890227 1092 dbSNP
rs962182319 1096 dbSNP
rs765271986 1101 dbSNP
rs1294071408 1111 dbSNP
rs1024147187 1112 dbSNP
rs1384908808 1116 dbSNP
rs1013979260 1117 dbSNP
rs1047155002 1118 dbSNP
rs1336048465 1126 dbSNP
rs929964037 1133 dbSNP
rs1283188249 1141 dbSNP
rs1361013958 1143 dbSNP
rs1223815148 1144 dbSNP
rs917260097 1148 dbSNP
rs1487692957 1150 dbSNP
rs1265395306 1154 dbSNP
rs1251502591 1156 dbSNP
rs1439258989 1157 dbSNP
rs958454487 1163 dbSNP
rs959214010 1164 dbSNP
rs1033990761 1182 dbSNP
rs182206774 1187 dbSNP
rs1349264919 1194 dbSNP
rs1281328970 1198 dbSNP
rs867553291 1203 dbSNP
rs867261701 1209 dbSNP
rs1042355024 1214 dbSNP
rs1299727295 1219 dbSNP
rs1400776395 1229 dbSNP
rs1445531387 1234 dbSNP
rs151074082 1241 dbSNP
rs1384338814 1243 dbSNP
rs1272918211 1250 dbSNP
rs542503686 1258 dbSNP
rs575241923 1268 dbSNP
rs1232415800 1274 dbSNP
rs1320504243 1275 dbSNP
rs1341097798 1277 dbSNP
rs1207265940 1285 dbSNP
rs1252187060 1287 dbSNP
rs901311885 1288 dbSNP
rs746306076 1291 dbSNP
rs1196925615 1292 dbSNP
rs769085563 1298 dbSNP
rs954336550 1299 dbSNP
rs117576427 1309 dbSNP
rs1181422665 1310 dbSNP
rs77082854 1311 dbSNP
rs1421926703 1315 dbSNP
rs1415883446 1318 dbSNP
rs911325990 1325 dbSNP
rs1424012253 1327 dbSNP
rs570836419 1339 dbSNP
rs900407502 1340 dbSNP
rs1407932216 1342 dbSNP
rs1016219081 1346 dbSNP
rs145434188 1348 dbSNP
rs1301694825 1360 dbSNP
rs763035388 1361 dbSNP
rs6012773 1374 dbSNP
rs886305178 1375 dbSNP
rs866906454 1388 dbSNP
rs1047109149 1400 dbSNP
rs930081971 1401 dbSNP
rs918633641 1402 dbSNP
rs1426442521 1404 dbSNP
rs972351291 1405 dbSNP
rs1209698823 1407 dbSNP
rs1235740445 1423 dbSNP
rs1486903542 1424 dbSNP
rs961962080 1427 dbSNP
rs534322720 1446 dbSNP
rs917058263 1448 dbSNP
rs1168349987 1449 dbSNP
rs752061707 1450 dbSNP
rs1414621204 1454 dbSNP
rs1258401618 1459 dbSNP
rs763988092 1461 dbSNP
rs927533684 1468 dbSNP
rs1432340638 1469 dbSNP
rs992676551 1476 dbSNP
rs958549295 1477 dbSNP
rs1034500311 1479 dbSNP
rs1276205195 1487 dbSNP
rs1285519286 1490 dbSNP
rs1346156136 1491 dbSNP
rs999984545 1497 dbSNP
rs1318447784 1510 dbSNP
rs1276832561 1523 dbSNP
rs1318779133 1527 dbSNP
rs968788992 1529 dbSNP
rs1019953844 1537 dbSNP
rs954450708 1541 dbSNP
rs632376 1546 dbSNP
rs1487889842 1550 dbSNP
rs189549010 1572 dbSNP
rs964429860 1574 dbSNP
rs1019717687 1587 dbSNP
rs1284335519 1595 dbSNP
rs1016585744 1604 dbSNP
rs750783039 1605 dbSNP
rs1006152774 1606 dbSNP
rs1401930677 1615 dbSNP
rs1158784271 1625 dbSNP
rs1449733999 1627 dbSNP
rs13038678 1637 dbSNP
rs1418337276 1647 dbSNP
rs886250265 1648 dbSNP
rs1332018572 1649 dbSNP
rs1436257852 1652 dbSNP
rs1357104847 1655 dbSNP
rs1375876823 1657 dbSNP
rs1333870055 1660 dbSNP
rs1006995619 1665 dbSNP
rs867092250 1666 dbSNP
rs1214302264 1667 dbSNP
rs1291996138 1667 dbSNP
rs1451934172 1668 dbSNP
rs889982436 1668 dbSNP
rs1441093969 1670 dbSNP
rs1026109293 1671 dbSNP
rs1466486457 1671 dbSNP
rs1165985315 1672 dbSNP
rs868473538 1672 dbSNP
rs1403005805 1675 dbSNP
rs1392167558 1676 dbSNP
rs1405129259 1677 dbSNP
rs1169162533 1678 dbSNP
rs1477815127 1679 dbSNP
rs1418640332 1680 dbSNP
rs1447748971 1681 dbSNP
rs1308836913 1683 dbSNP
rs1183712533 1684 dbSNP
rs1471910286 1685 dbSNP
rs1048953410 1687 dbSNP
rs1237141032 1688 dbSNP
rs1287387002 1689 dbSNP
rs868158049 1689 dbSNP
rs865848062 1691 dbSNP
rs1011940029 1693 dbSNP
rs1237233279 1693 dbSNP
rs1186505991 1694 dbSNP
rs1189091117 1694 dbSNP
rs6125806 1695 dbSNP
rs1162013824 1696 dbSNP
rs917151099 1696 dbSNP
rs1196656696 1697 dbSNP
rs1317269360 1699 dbSNP
rs1289928634 1701 dbSNP
rs1282378403 1702 dbSNP
rs1257016465 1703 dbSNP
rs1319709915 1703 dbSNP
rs1229564966 1704 dbSNP
rs1376450239 1705 dbSNP
rs1283243775 1706 dbSNP
rs1447155031 1707 dbSNP
rs1186024286 1708 dbSNP
rs1266029941 1708 dbSNP
rs1379560112 1708 dbSNP
rs1478348290 1708 dbSNP
rs1015903241 1709 dbSNP
rs1465534812 1710 dbSNP
rs1351009394 1711 dbSNP
rs1166941718 1712 dbSNP
rs1394414836 1713 dbSNP
rs6020121 1713 dbSNP
rs1198302604 1715 dbSNP
rs1277264310 1715 dbSNP
rs1342354667 1715 dbSNP
rs1400554063 1715 dbSNP
rs879570309 1715 dbSNP
rs1160469929 1717 dbSNP
rs1162465313 1717 dbSNP
rs1170209910 1717 dbSNP
rs1193583257 1717 dbSNP
rs1199825783 1717 dbSNP
rs1216465944 1717 dbSNP
rs1230630589 1717 dbSNP
rs1261433328 1717 dbSNP
rs1288770820 1717 dbSNP
rs1297527044 1717 dbSNP
rs1301529689 1717 dbSNP
rs1310731299 1717 dbSNP
rs1353839687 1717 dbSNP
rs1358363936 1717 dbSNP
rs1377324559 1717 dbSNP
rs1388334957 1717 dbSNP
rs1431587837 1717 dbSNP
rs1435302063 1717 dbSNP
rs1464598675 1717 dbSNP
rs1488872414 1717 dbSNP
rs374830291 1717 dbSNP
rs539507835 1717 dbSNP
rs569208557 1717 dbSNP
rs7343604 1717 dbSNP
rs1403689253 1718 dbSNP
rs1157939141 1719 dbSNP
rs1293843241 1719 dbSNP
rs1362055579 1719 dbSNP
rs1389757780 1719 dbSNP
rs1439211233 1719 dbSNP
rs895897744 1720 dbSNP
rs1165438605 1721 dbSNP
rs1172335852 1721 dbSNP
rs1176910769 1721 dbSNP
rs1200732580 1721 dbSNP
rs1238845083 1721 dbSNP
rs1239056662 1721 dbSNP
rs1239261429 1721 dbSNP
rs1246169358 1721 dbSNP
rs1265185283 1721 dbSNP
rs1307702693 1721 dbSNP
rs1323968453 1721 dbSNP
rs1332979871 1721 dbSNP
rs1367629511 1721 dbSNP
rs1376967459 1721 dbSNP
rs1380747515 1721 dbSNP
rs1397071011 1721 dbSNP
rs1400663074 1721 dbSNP
rs1416074378 1721 dbSNP
rs1425420844 1721 dbSNP
rs1445599184 1721 dbSNP
rs1459724534 1721 dbSNP
rs1487721536 1721 dbSNP
rs1413258742 1722 dbSNP
rs1195528869 1723 dbSNP
rs1333104487 1723 dbSNP
rs937147663 1737 dbSNP
rs1441835266 1741 dbSNP
rs1239746848 1750 dbSNP
rs1057185505 1752 dbSNP
rs1196994656 1759 dbSNP
rs927189314 1769 dbSNP
rs937321596 1772 dbSNP
rs978880362 1774 dbSNP
rs1182355360 1777 dbSNP
rs76401661 1784 dbSNP
rs1457230430 1795 dbSNP
rs1043677998 1800 dbSNP
rs1337875350 1821 dbSNP
rs1020344450 1832 dbSNP
rs1223047082 1833 dbSNP
rs181295587 1839 dbSNP
rs965039082 1842 dbSNP
rs1288602909 1843 dbSNP
rs564621766 1847 dbSNP
rs1424078375 1849 dbSNP
rs1464741709 1853 dbSNP
rs367694314 1858 dbSNP
rs1019812086 1860 dbSNP
rs1466138989 1862 dbSNP
rs913368020 1879 dbSNP
rs1354172807 1881 dbSNP
rs1007131509 1882 dbSNP
rs889911882 1888 dbSNP
rs1279168722 1897 dbSNP
rs1027162048 1901 dbSNP
rs1281057414 1902 dbSNP
rs933512817 1908 dbSNP
rs1209592712 1911 dbSNP
rs549355184 1912 dbSNP
rs922995262 1930 dbSNP
rs1368847252 1932 dbSNP
rs1295806170 1934 dbSNP
rs995967037 1938 dbSNP
rs1477400115 1946 dbSNP
rs779147326 1947 dbSNP
rs897256468 1948 dbSNP
rs567233644 1956 dbSNP
rs564109820 1957 dbSNP
rs757566207 1958 dbSNP
rs1174673213 1959 dbSNP
rs536371326 1960 dbSNP
rs191126909 1961 dbSNP
rs985075745 1974 dbSNP
rs1299368479 1982 dbSNP
rs375814885 1982 dbSNP
rs1360268737 1984 dbSNP
rs1378728992 1985 dbSNP
rs950645690 1988 dbSNP
rs1368646272 1989 dbSNP
rs75624022 1996 dbSNP
rs1213651464 1998 dbSNP
rs1057069745 2004 dbSNP
rs1355974989 2008 dbSNP
rs1013370503 2013 dbSNP
rs960553112 2022 dbSNP
rs187037642 2023 dbSNP
rs575202618 2026 dbSNP
rs147186182 2027 dbSNP
rs1425695498 2028 dbSNP
rs117743095 2029 dbSNP
rs546270445 2034 dbSNP
rs1159754010 2039 dbSNP
rs1380297674 2041 dbSNP
rs1399310486 2041 dbSNP
rs577141627 2051 dbSNP
rs947101388 2052 dbSNP
rs1043068766 2057 dbSNP
rs1216744317 2059 dbSNP
rs1324193531 2060 dbSNP
rs546398390 2068 dbSNP
rs1241043194 2069 dbSNP
rs1489039381 2073 dbSNP
rs912963197 2076 dbSNP
rs1239788956 2078 dbSNP
rs892047899 2079 dbSNP
rs988550408 2086 dbSNP
rs753900068 2088 dbSNP
rs1291715763 2097 dbSNP
rs1212660432 2112 dbSNP
rs1451993014 2112 dbSNP
rs1019241369 2113 dbSNP
rs1458712156 2121 dbSNP
rs1053386618 2123 dbSNP
rs1303938298 2124 dbSNP
rs1237046553 2126 dbSNP
rs1468995498 2128 dbSNP
rs933460272 2131 dbSNP
rs750100381 2142 dbSNP
rs558926541 2146 dbSNP
rs1405179976 2152 dbSNP
rs1163046616 2154 dbSNP
rs879179213 2194 dbSNP
rs1402798734 2199 dbSNP
rs1447810337 2201 dbSNP
rs144208642 2210 dbSNP
rs767759112 2210 dbSNP
rs943137322 2210 dbSNP
rs1439876448 2213 dbSNP
rs908838791 2215 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000289431.5 | 3UTR | AGCGACUCAGAUAUCUCAACCAAUGGCUGCUUUGUUGUCUGACAAGGGAGAAGGUGGCACUUCCGUUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
203 hsa-miR-6867-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT078229 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT107799 SLC1A1 solute carrier family 1 member 1 2 2
MIRT115808 CAPN15 calpain 15 2 2
MIRT137570 RCOR1 REST corepressor 1 2 2
MIRT161372 MBNL1 muscleblind like splicing regulator 1 2 2
MIRT320477 HOXA10 homeobox A10 2 2
MIRT444449 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT461305 MRPS27 mitochondrial ribosomal protein S27 2 6
MIRT470306 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT471679 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT475546 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT480901 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT489368 RAB11B RAB11B, member RAS oncogene family 2 2
MIRT489557 PLD6 phospholipase D family member 6 2 2
MIRT494969 TMEM233 transmembrane protein 233 2 2
MIRT496634 SLC46A1 solute carrier family 46 member 1 2 2
MIRT500259 ZNF788 zinc finger family member 788 2 6
MIRT500272 ZNF781 zinc finger protein 781 2 8
MIRT500328 ZNF487P zinc finger protein 487 1 3
MIRT504012 ACSL6 acyl-CoA synthetase long chain family member 6 2 2
MIRT504830 EREG epiregulin 2 2
MIRT513588 DCTN6 dynactin subunit 6 2 2
MIRT520896 STMN1 stathmin 1 2 2
MIRT525275 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT526166 ANKRD65 ankyrin repeat domain 65 2 2
MIRT526582 CCDC43 coiled-coil domain containing 43 2 2
MIRT527812 TMEM74B transmembrane protein 74B 2 2
MIRT528141 LRRC38 leucine rich repeat containing 38 2 2
MIRT529903 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531980 SLCO1B3 solute carrier organic anion transporter family member 1B3 2 2
MIRT532251 TBPL2 TATA-box binding protein like 2 2 2
MIRT534300 SKIDA1 SKI/DACH domain containing 1 2 2
MIRT534879 QKI QKI, KH domain containing RNA binding 2 2
MIRT538305 CSNK2A1 casein kinase 2 alpha 1 2 2
MIRT539385 ADRB1 adrenoceptor beta 1 2 2
MIRT541304 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT543960 RNF20 ring finger protein 20 2 2
MIRT544380 ZNF266 zinc finger protein 266 2 2
MIRT544451 KRBOX4 KRAB box domain containing 4 2 2
MIRT545783 ZNF791 zinc finger protein 791 2 4
MIRT548156 FRAT2 FRAT2, WNT signaling pathway regulator 2 2
MIRT556660 KMT2D lysine methyltransferase 2D 2 4
MIRT557715 GABARAPL1 GABA type A receptor associated protein like 1 2 2
MIRT562701 ZNF415 zinc finger protein 415 2 2
MIRT563050 ZNF138 zinc finger protein 138 2 2
MIRT564307 CCNT1 cyclin T1 2 2
MIRT568333 BACH1 BTB domain and CNC homolog 1 2 2
MIRT570864 ZNF525 zinc finger protein 525 2 2
MIRT570874 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571516 ZNF625 zinc finger protein 625 2 2
MIRT572470 MTMR10 myotubularin related protein 10 2 2
MIRT572898 RUNDC3B RUN domain containing 3B 2 2
MIRT573084 APLN apelin 2 2
MIRT575251 Timp3 tissue inhibitor of metalloproteinase 3 2 2
MIRT575275 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 2 2
MIRT607230 LINS lines homolog 1 2 4
MIRT611803 FCRL4 Fc receptor like 4 2 2
MIRT612669 POU2F1 POU class 2 homeobox 1 2 4
MIRT612739 MYOCD myocardin 2 2
MIRT613409 CDH8 cadherin 8 2 4
MIRT614007 PAOX polyamine oxidase 2 2
MIRT615188 CLUAP1 clusterin associated protein 1 2 2
MIRT616497 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT616524 URM1 ubiquitin related modifier 1 2 2
MIRT617066 SPIB Spi-B transcription factor 2 2
MIRT617813 EMX2 empty spiracles homeobox 2 2 2
MIRT619291 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619375 KLHL12 kelch like family member 12 2 2
MIRT619499 TXLNB taxilin beta 2 2
MIRT619601 MKKS McKusick-Kaufman syndrome 2 2
MIRT619754 MYO1F myosin IF 2 2
MIRT619976 ZSCAN22 zinc finger and SCAN domain containing 22 2 2
MIRT620743 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT620871 KCTD7 potassium channel tetramerization domain containing 7 2 2
MIRT621380 CLNK cytokine dependent hematopoietic cell linker 2 2
MIRT621511 ZNF638 zinc finger protein 638 2 2
MIRT621537 ZNF500 zinc finger protein 500 2 2
MIRT621772 TMEM87B transmembrane protein 87B 2 2
MIRT622193 SLC5A12 solute carrier family 5 member 12 2 2
MIRT622319 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT622738 PITPNM3 PITPNM family member 3 2 2
MIRT622996 ONECUT3 one cut homeobox 3 2 2
MIRT625301 SHISA6 shisa family member 6 2 2
MIRT625637 KCNQ3 potassium voltage-gated channel subfamily Q member 3 2 2
MIRT627698 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT627751 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT628438 ANTXR2 anthrax toxin receptor 2 2 2
MIRT635440 SLC25A44 solute carrier family 25 member 44 2 2
MIRT637166 TMEM50A transmembrane protein 50A 2 2
MIRT638207 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT639288 TFAP2A transcription factor AP-2 alpha 2 4
MIRT639398 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT641230 SEMA3E semaphorin 3E 2 2
MIRT641501 STC2 stanniocalcin 2 2 2
MIRT642577 PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 2 2
MIRT642735 TDRD6 tudor domain containing 6 2 2
MIRT644001 PPP1R3G protein phosphatase 1 regulatory subunit 3G 2 2
MIRT644210 CBS cystathionine-beta-synthase 2 2
MIRT645405 FAM110A family with sequence similarity 110 member A 2 2
MIRT645685 TBC1D13 TBC1 domain family member 13 2 2
MIRT645699 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT645761 SURF6 surfeit 6 2 2
MIRT645826 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT645914 PLXNA3 plexin A3 2 2
MIRT646167 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646634 COA4 cytochrome c oxidase assembly factor 4 homolog 2 2
MIRT647547 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT648262 ZNF582 zinc finger protein 582 2 2
MIRT648385 ZNF22 zinc finger protein 22 2 2
MIRT648629 LEMD2 LEM domain containing 2 2 2
MIRT649353 SLC27A2 solute carrier family 27 member 2 2 2
MIRT649395 SH2D4A SH2 domain containing 4A 2 2
MIRT650241 CD68 CD68 molecule 2 2
MIRT650379 PTGIS prostaglandin I2 synthase 2 2
MIRT650705 KRT32 keratin 32 2 2
MIRT650854 UNC13D unc-13 homolog D 2 2
MIRT651042 ZNF644 zinc finger protein 644 2 2
MIRT651102 ZNF48 zinc finger protein 48 2 2
MIRT651130 ZNF398 zinc finger protein 398 2 2
MIRT652089 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT652200 TRIM33 tripartite motif containing 33 2 2
MIRT652422 TMEM239 transmembrane protein 239 2 2
MIRT652755 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT653201 SP9 Sp9 transcription factor 2 2
MIRT653338 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653715 SLC25A32 solute carrier family 25 member 32 2 2
MIRT654456 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT654499 RABIF RAB interacting factor 2 2
MIRT654678 PSMB5 proteasome subunit beta 5 2 2
MIRT655162 PHF20L1 PHD finger protein 20 like 1 2 2
MIRT655540 PADI2 peptidyl arginine deiminase 2 2 4
MIRT655850 NFE2L1 nuclear factor, erythroid 2 like 1 2 2
MIRT656248 MEX3A mex-3 RNA binding family member A 2 2
MIRT656581 LSAMP limbic system-associated membrane protein 2 2
MIRT657597 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT657824 GJD3 gap junction protein delta 3 2 2
MIRT658466 FAM102B family with sequence similarity 102 member B 2 2
MIRT659083 DENR density regulated re-initiation and release factor 2 2
MIRT659196 CYBB cytochrome b-245 beta chain 2 2
MIRT659558 CGGBP1 CGG triplet repeat binding protein 1 2 2
MIRT659860 CAPRIN1 cell cycle associated protein 1 2 2
MIRT660172 BNC2 basonuclin 2 2 2
MIRT660626 ANKRD52 ankyrin repeat domain 52 2 2
MIRT660917 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT660979 ABHD2 abhydrolase domain containing 2 2 2
MIRT661564 EPHX2 epoxide hydrolase 2 2 2
MIRT662214 CCRL2 C-C motif chemokine receptor like 2 2 2
MIRT662246 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT662560 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT662591 MAGEB4 MAGE family member B4 2 2
MIRT663294 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT663437 FBXO2 F-box protein 2 2 2
MIRT663811 RNF128 ring finger protein 128, E3 ubiquitin protein ligase 2 2
MIRT663821 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT665959 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT666115 SRRM4 serine/arginine repetitive matrix 4 2 2
MIRT667448 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT669330 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT669409 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669641 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT672663 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT673266 RUNDC1 RUN domain containing 1 2 2
MIRT676995 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT679290 SSBP2 single stranded DNA binding protein 2 2 2
MIRT687508 NCKAP1 NCK associated protein 1 2 2
MIRT698932 SPATA2 spermatogenesis associated 2 2 2
MIRT700852 PERP PERP, TP53 apoptosis effector 2 2
MIRT702426 KIAA1958 KIAA1958 2 2
MIRT703939 EPB41L1 erythrocyte membrane protein band 4.1 like 1 2 2
MIRT708962 SLC12A3 solute carrier family 12 member 3 2 2
MIRT709742 UBD ubiquitin D 2 2
MIRT709946 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT711121 CYYR1 cysteine and tyrosine rich 1 2 2
MIRT711217 RETSAT retinol saturase 2 2
MIRT711576 ASPA aspartoacylase 2 2
MIRT711599 LHX5 LIM homeobox 5 2 2
MIRT712232 RCC2 regulator of chromosome condensation 2 2 2
MIRT713317 TMEM44 transmembrane protein 44 2 2
MIRT713510 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT713543 GJB1 gap junction protein beta 1 2 2
MIRT713621 MED8 mediator complex subunit 8 2 2
MIRT714988 TSPAN11 tetraspanin 11 2 2
MIRT715449 PTCD1 pentatricopeptide repeat domain 1 2 2
MIRT715575 ATP5J2-PTCD1 ATP5J2-PTCD1 readthrough 2 2
MIRT715771 DDX42 DEAD-box helicase 42 2 2
MIRT715887 GNG2 G protein subunit gamma 2 2 2
MIRT716091 HARS histidyl-tRNA synthetase 2 2
MIRT717403 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT717965 PXMP4 peroxisomal membrane protein 4 2 2
MIRT718324 METTL7A methyltransferase like 7A 2 2
MIRT718628 DIP2A disco interacting protein 2 homolog A 2 2
MIRT719213 CAMK4 calcium/calmodulin dependent protein kinase IV 2 2
MIRT719234 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719817 LRRC4 leucine rich repeat containing 4 2 2
MIRT719978 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720480 TMEM178B transmembrane protein 178B 2 2
MIRT720713 RAPGEF6 Rap guanine nucleotide exchange factor 6 2 2
MIRT721006 ZNF619 zinc finger protein 619 2 2
MIRT721741 SDK2 sidekick cell adhesion molecule 2 2 2
MIRT723547 ZDHHC22 zinc finger DHHC-type containing 22 2 2
MIRT723596 FKRP fukutin related protein 2 2
MIRT723746 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT724784 C1D C1D nuclear receptor corepressor 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6867-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)

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