pre-miRNA Information
pre-miRNA hsa-mir-2355   
Genomic Coordinates chr2: 207109987 - 207110073
Description Homo sapiens miR-2355 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-2355-5p
Sequence 11| AUCCCCAGAUACAAUGGACAA |31
Evidence Experimental
Experiments SOLiD
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 2 - 207110063 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1268296297 4 dbSNP
rs1361046879 5 dbSNP
rs1219551997 6 dbSNP
rs1295756820 12 dbSNP
rs1345273529 15 dbSNP
rs977145706 15 dbSNP
rs1209629984 20 dbSNP
rs759940260 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SLC30A6   
Synonyms MST103, MSTP103, ZNT6
Description solute carrier family 30 member 6
Transcript NM_017964   
Expression
Putative miRNA Targets on SLC30A6
3'UTR of SLC30A6
(miRNA target sites are highlighted)
>SLC30A6|NM_017964|3'UTR
   1 TAGACTCTAACTTATTTTTATAAGGAATATTGACTCCTTGGCTTCCAATTTATTTAGTAATCCAACTTTGCATTGACTGT
  81 TTAATCATTTACTCTAAATGTTAGATAATAGTAGTCTTGTTCACATTTCATGAAACCTATGAAACTATATTTTTGTAAAA
 161 TGTATTTGTGACAGTGAAATCCTCGTAAATGTTAAAGGCTTTAAATAGGCTTCCTTTAGAAAATGTGTTTCTTTAAATTT
 241 GGATTTTGGTATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGA
 321 TCTGTCACATTACTAAGATACGATATTTCTTTTTTTTTCCGAGACGGAGTCTTGCTCTGCCACTGTGCCCGGCCAATACA
 401 TTATTATTAACTTAAGGCTGTACTTTATTAAGGCTTCCTTAGTTTTTGTTTTGTTTTGTTTTTTGAGATGGAGTCTCACT
 481 CTGTCGCCCAGGCTGGAATGCAGTGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGC
 561 CTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAAAGACGGGGG
 641 ATTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCATGATCCACCCACCTTAGCCTCCCAAAGTGCTGGGATT
 721 AGGTGTGAGCCACCGCACCTGGCCGATATTTTCTTTAATGAAATTTATAAATATGCTTCTTGAATAATACACATTTTGGG
 801 AAAGGGAAAAATGTCTGTTCAAAAAGTAAAAGTCTCTTTTATAGCTTTTCCAAACTTAATTGCTAAATTTTTCTTTGAGG
 881 TTCTCCTGAATTATGTCTTACAAACTAAAAGCAAAAATTTTTAGCAGAAATTTTGGAATACATTCTATCTAGCACAATTT
 961 GAATTTTTAATTATCAAGATTTTTGTTAAAGTTTCTCTCCTTTAAAAATTTTAGTACATTTGTAAATAGTCCATGGTTCT
1041 CAGTGTTTTATTTTGATTAAGTGACTACCCAACTTTTGGTGATATGCAGTGAAAGAATCCCAATTTTCTATGTTACATTT
1121 AATCAAATACTGACATAATGAATTTATCTTTCCTGACACATTTTCATTCATTGGCTTTTTAATTTCTTATTTTATTAACA
1201 AAATATATCAGATATATTACCAAAACACATGGAGTTCCATACATAATATGGAATTTGATGTCTTTTCAAGTTGCACAAAG
1281 AATTTGAGCATATATAATTTTACCAAAGCATAATGGACCTTAGATTATAGAATACAGCATTGTTAGGTCTGCAGTGGGCA
1361 GTTTCTTTTTGTTTTGCTTTGTCAAAAATGGGAAATTGTTAACTGTGATGAAATGTGAGAATTACATAGATTATGTTATT
1441 TTTTAGTTGTTTTCCAAATGCAGAGTTTAAGGACTTTCTAACATGGCTAGTATTACTTCCAAAAAGTATAACAAGCAGCA
1521 GTCACACATGACCTAGGAGGGTTTTTTATTGTTTTATTTTATTATGCATTCCATAACAGTTTTAAAATGGGATTTTGAGA
1601 ATGGACTTAACTTTCCTGGAATCCAATGCTCCTGGAGATTTATGACTTTCCCAGCCATCAGCCAGCTATCTAGAGAAGAT
1681 TTTTGTTTTTCTTTTGCAACAGTTTCTTCAGTCAACTCATTCACTTTCAAATAGGAGCAGCACTTTGAAATCCTTTTTCT
1761 TCACTGTGGATTAAAAACATCCAAGAAGCCATCTCTGTCAAGCAGAATTGTCATCTGTGGTAATAAGTGACCATGTCCTA
1841 AATACCTTTTTCTTAGTGAGGAGTTGGTCATTGTCTTTGGCATCTGCAACCCCTGTTCAGGCATGTGACCTGCTAAAGAA
1921 ATACAGCCTACACTACCTTGACTACTGGGGAAAATGATACTTCGTAAAATGTAATAAGGCAACCTGTTCCTTGGCCTTTA
2001 TCTTATGTTTTCCAACTATTACTGTATCTGTTATTGGTCTACTATTACAGGATGATTCTTCTTCCTCCATTGATCTCAAC
2081 TAAATATGAATTAGGGTCATGCATGAAATCTGAACTGCCGTGTCCTGAGTTATGGTTAAGAGGTATGTGCTGCCACCCCA
2161 TGCATGTCTTCCCCATCCCCATAGGATTTTAAAGTGTTCAGGTACCAAACACAGTTCTGTGTGAGGTTTTATGCCTACTT
2241 CCTCAACACCAATTCAGAGGCAACACCTGTGCATCTGTCCCACCAAAGGTGCTTTAATACCTACCTTCACTATTTGAGAA
2321 AGGACACTCACAGTTGCCTGTGGGTTATGAAAGAATTGGCCCTACGTCCTGCATGTAAGATGTTACAGGGGACATTGGGC
2401 CAGGCATTATTATATAGAGAAGTCTTATTTGCCAAGCTCTGACTAACTTCTGGATATGAAAATAAGGAACTTGCCCAGCA
2481 TAGGCCTATAGGCAGCAGCCTTACTAGTAAATCTTGCCACAGAATCACTTGAAGCTAGACAGAGAAAGAAGTTCAATTTA
2561 AATATTTGTCCCATTGTTTGTGATTAGGATGTAAGCTTTGTGGAATGTAATTAACCCTGCTTTACGAAGTCACCATATTA
2641 TAATAGGAAAAACACTGCCTAGGAGGCAAGAGATCTGAATTCCAGTTCTGATGCTGCCACTGTGTAAGGAAGTAGTTTTA
2721 TAACCCATGGGCAAATCATCTGAGCTTTCTCATCTGTAAAGTTAGGGAGAGGAATTAATTAGTTGATCTGTAAAATAATC
2801 AGCTTCAAAACGTTATGGCTAAATCTGTAGAATGTATGCCCAATTGCTAAACGGATGTTGTGCCCAGAATTTTATCTAGT
2881 GACTACCTCAACATACAGGCCAAGCGTTACCTACACCAACACCCAAGCCATTAATTTGAGGTGCCATGAGAATAGGTGAA
2961 CCACAGCCTAACACCATTTAGGTTTTTGTGTTTTTTTCAGGCTTGCCTCTACTTAAATATATTTAGATGAGAGAGTTCTC
3041 TTAGACTTCTTTCTTTGTAAGGAAGGGTTATTTGGGGAAGTGTTGGAAAAAAGATTAGGGCAGGGTACCCTTAGTTTATA
3121 TAGGGTACAAAAGAATGGGAAACATCTTCCCTTTCTTCTTTAATCTCTGAAGTCATGTTTGGAATTACATATAATGTAGC
3201 AGGTACTGGAGAGGACCTGAATTTCAAGCTTCTGATTTAGCTGTTTGTAAACTTCCAAGTTTTGCTTGACTAAAGAATGC
3281 TGATCTTTTTTGGGAGTCTGATCTCCTTCTAATATCAGAAAGTGCTTTTTATATTCCAGATTGCTTGAATTAAACTGTTT
3361 GGATTAAAGAACATATATGGAGTTTCCTCTCTGGTTTTAAATAATCTTTCTTTATTCAGTAGCTATTAATAATTTATCTC
3441 ATATTCAGCGAATATTTATTGAGAATATTGTTGAGAATCTCTTACATGCCAGGCACTATACTAAGTTAATATGCATTCAG
3521 TATACCAGTTGGTGTGACCCAGACCAAAGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAG
3601 GAGAGCTAAGACACAAAACTGTTGCATGTTTTTAATCATCAAATTAAACTTCTTTCCACGTCCTTAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aacAGGUAAC--AUAGACCCCUa 5'
             | | |||  || ||||||| 
Target 5' cacTACCTTGACTA-CTGGGGAa 3'
1931 - 1952 151.00 -14.90
2
miRNA  3' aacagguaacAUAGACCCCUa 5'
                    |||:|||||| 
Target 5' aaggaagggtTATTTGGGGAa 3'
3059 - 3079 139.00 -12.70
3
miRNA  3' aacAGGUAACAUAGACCCCUa 5'
             |||| ||   |||| || 
Target 5' gaaTCCAATGCTCCTGGAGAt 3'
1619 - 1639 126.00 -11.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30522292 76 COSMIC
COSN28188326 131 COSMIC
COSN30209518 362 COSMIC
COSN32161571 368 COSMIC
COSN16996886 473 COSMIC
COSN20897330 595 COSMIC
COSN21763532 673 COSMIC
COSN22075737 760 COSMIC
COSN22749604 1542 COSMIC
COSN1836075 1549 COSMIC
COSN1836077 1743 COSMIC
COSN21722734 1824 COSMIC
COSN15814406 1854 COSMIC
COSN29074793 2176 COSMIC
COSN5791492 2534 COSMIC
COSN16963600 2685 COSMIC
COSN28201730 2791 COSMIC
COSN19473821 2828 COSMIC
COSN9370649 2906 COSMIC
COSN29979002 3055 COSMIC
COSN1237770 3070 COSMIC
COSN27712901 3570 COSMIC
COSN25762125 3602 COSMIC
COSN1836079 3644 COSMIC
rs72796891 1627 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1265480466 1 dbSNP
rs1488718784 2 dbSNP
rs188923666 4 dbSNP
rs755328442 5 dbSNP
rs1384193700 10 dbSNP
rs1267141199 20 dbSNP
rs1223423034 21 dbSNP
rs1479214163 27 dbSNP
rs1247489350 33 dbSNP
rs778526858 34 dbSNP
rs578124810 35 dbSNP
rs1365544908 36 dbSNP
rs966846850 38 dbSNP
rs1299296021 42 dbSNP
rs559365700 43 dbSNP
rs528184429 49 dbSNP
rs746594573 51 dbSNP
rs192574477 66 dbSNP
rs1352090181 67 dbSNP
rs928734727 74 dbSNP
rs1019188625 77 dbSNP
rs541800942 81 dbSNP
rs753907534 84 dbSNP
rs1201355129 86 dbSNP
rs958760767 91 dbSNP
rs1246637667 95 dbSNP
rs1464610243 96 dbSNP
rs1187004416 100 dbSNP
rs1486926137 105 dbSNP
rs752975705 106 dbSNP
rs1194435271 110 dbSNP
rs1255145556 114 dbSNP
rs1215082779 118 dbSNP
rs1324538751 132 dbSNP
rs991676877 136 dbSNP
rs777086232 137 dbSNP
rs920078813 138 dbSNP
rs965992039 140 dbSNP
rs908781886 145 dbSNP
rs1452352114 146 dbSNP
rs1431465002 149 dbSNP
rs758971422 152 dbSNP
rs1468075548 164 dbSNP
rs921812148 165 dbSNP
rs545392824 168 dbSNP
rs1156664426 172 dbSNP
rs899615411 180 dbSNP
rs996528178 183 dbSNP
rs377105267 185 dbSNP
rs140503946 186 dbSNP
rs1365077201 192 dbSNP
rs1385691869 203 dbSNP
rs1201980144 211 dbSNP
rs893606795 245 dbSNP
rs1009813133 252 dbSNP
rs1336858189 291 dbSNP
rs907976598 293 dbSNP
rs940757643 294 dbSNP
rs111919821 296 dbSNP
rs1306276697 298 dbSNP
rs906431055 301 dbSNP
rs928791568 316 dbSNP
rs145402039 317 dbSNP
rs1338372096 319 dbSNP
rs1267416351 323 dbSNP
rs1449990367 331 dbSNP
rs1487649838 337 dbSNP
rs958792555 339 dbSNP
rs1251404239 342 dbSNP
rs564498392 343 dbSNP
rs1055976886 344 dbSNP
rs533538772 346 dbSNP
rs1182042492 350 dbSNP
rs1387162021 350 dbSNP
rs983345571 352 dbSNP
rs1010553278 360 dbSNP
rs546892028 361 dbSNP
rs369864214 362 dbSNP
rs999680621 364 dbSNP
rs1251281531 366 dbSNP
rs1018658157 367 dbSNP
rs183687971 370 dbSNP
rs878919531 371 dbSNP
rs901686698 378 dbSNP
rs932410698 384 dbSNP
rs1339536567 388 dbSNP
rs372843302 391 dbSNP
rs1392973526 392 dbSNP
rs866734824 393 dbSNP
rs1053501081 396 dbSNP
rs995982245 400 dbSNP
rs945258685 407 dbSNP
rs1028932678 411 dbSNP
rs535602131 414 dbSNP
rs1397927901 417 dbSNP
rs951923744 423 dbSNP
rs1161756445 425 dbSNP
rs984837754 428 dbSNP
rs1364646153 435 dbSNP
rs1015330883 439 dbSNP
rs1350449717 443 dbSNP
rs1234251186 459 dbSNP
rs1315330469 466 dbSNP
rs962189438 468 dbSNP
rs1035703350 472 dbSNP
rs1290164690 475 dbSNP
rs1219644249 479 dbSNP
rs981933473 484 dbSNP
rs928687722 486 dbSNP
rs1287506482 487 dbSNP
rs376560978 487 dbSNP
rs1405260548 488 dbSNP
rs1367408090 495 dbSNP
rs1301166301 499 dbSNP
rs1404877431 504 dbSNP
rs1203138629 505 dbSNP
rs1385756396 506 dbSNP
rs1160572922 507 dbSNP
rs1250933267 507 dbSNP
rs1451913916 511 dbSNP
rs991600682 524 dbSNP
rs1411419882 528 dbSNP
rs147693192 543 dbSNP
rs947634635 546 dbSNP
rs1183368089 552 dbSNP
rs536928740 557 dbSNP
rs1411440256 558 dbSNP
rs1027101878 565 dbSNP
rs1284331679 570 dbSNP
rs142581037 572 dbSNP
rs934978315 573 dbSNP
rs1223919242 578 dbSNP
rs1040541194 582 dbSNP
rs1435652700 588 dbSNP
rs901570591 594 dbSNP
rs1380562560 601 dbSNP
rs188302187 604 dbSNP
rs1306919658 605 dbSNP
rs1471184743 609 dbSNP
rs1427636771 612 dbSNP
rs775390680 619 dbSNP
rs1313463456 628 dbSNP
rs1415996990 629 dbSNP
rs539580178 636 dbSNP
rs191646002 637 dbSNP
rs1006547980 640 dbSNP
rs572890216 641 dbSNP
rs1247085245 646 dbSNP
rs1203898981 647 dbSNP
rs962358595 648 dbSNP
rs976938115 649 dbSNP
rs1228122922 650 dbSNP
rs1218353873 654 dbSNP
rs920931539 659 dbSNP
rs1344617782 661 dbSNP
rs932353609 665 dbSNP
rs541986758 667 dbSNP
rs981435723 668 dbSNP
rs1364509470 669 dbSNP
rs561652625 672 dbSNP
rs768772231 681 dbSNP
rs945097661 682 dbSNP
rs1212069705 683 dbSNP
rs1042238371 686 dbSNP
rs1410845283 693 dbSNP
rs906332376 699 dbSNP
rs575339835 701 dbSNP
rs549276238 704 dbSNP
rs1388996901 709 dbSNP
rs1183602447 711 dbSNP
rs1055088362 714 dbSNP
rs895053940 715 dbSNP
rs1012946914 717 dbSNP
rs1438161944 724 dbSNP
rs1249473661 732 dbSNP
rs914742745 734 dbSNP
rs947540956 735 dbSNP
rs1167397939 736 dbSNP
rs544244338 740 dbSNP
rs1315838777 744 dbSNP
rs774373006 745 dbSNP
rs529032741 746 dbSNP
rs1015770414 752 dbSNP
rs935011127 756 dbSNP
rs1415683368 761 dbSNP
rs1040043965 764 dbSNP
rs965478759 766 dbSNP
rs62134026 769 dbSNP
rs184318576 772 dbSNP
rs1356612052 775 dbSNP
rs998306773 780 dbSNP
rs761410149 786 dbSNP
rs547123479 789 dbSNP
rs767011230 793 dbSNP
rs887610629 795 dbSNP
rs989181114 803 dbSNP
rs1411244480 807 dbSNP
rs1006016930 813 dbSNP
rs1180889441 817 dbSNP
rs1470429204 818 dbSNP
rs1433254232 822 dbSNP
rs914864624 825 dbSNP
rs212703 832 dbSNP
rs1371745502 833 dbSNP
rs190228593 835 dbSNP
rs1319981579 840 dbSNP
rs1312331859 841 dbSNP
rs1276373131 843 dbSNP
rs1311576754 852 dbSNP
rs1224525888 853 dbSNP
rs542976025 854 dbSNP
rs1269852945 857 dbSNP
rs1409552829 878 dbSNP
rs1003316381 880 dbSNP
rs1305465832 882 dbSNP
rs1426050710 889 dbSNP
rs1035647845 896 dbSNP
rs1163709928 902 dbSNP
rs1400947405 913 dbSNP
rs1409621740 926 dbSNP
rs1179787973 937 dbSNP
rs372629770 943 dbSNP
rs1463263451 945 dbSNP
rs1187465834 946 dbSNP
rs958822946 948 dbSNP
rs549097313 953 dbSNP
rs1216502333 968 dbSNP
rs1318983854 985 dbSNP
rs939203851 988 dbSNP
rs1228217078 990 dbSNP
rs1324677574 995 dbSNP
rs1021631002 996 dbSNP
rs1054949780 1004 dbSNP
rs1385583275 1010 dbSNP
rs916523138 1011 dbSNP
rs930530812 1016 dbSNP
rs561610918 1019 dbSNP
rs760417204 1025 dbSNP
rs1430772949 1032 dbSNP
rs1048402061 1034 dbSNP
rs1156482551 1041 dbSNP
rs888409886 1042 dbSNP
rs1429733972 1043 dbSNP
rs1414447981 1053 dbSNP
rs1004301710 1054 dbSNP
rs13429188 1066 dbSNP
rs969305493 1067 dbSNP
rs1486876653 1068 dbSNP
rs569035118 1070 dbSNP
rs1160364654 1076 dbSNP
rs977595795 1082 dbSNP
rs1208339773 1089 dbSNP
rs924881908 1090 dbSNP
rs1324787833 1096 dbSNP
rs181858632 1104 dbSNP
rs1231440286 1105 dbSNP
rs954309356 1109 dbSNP
rs1011542240 1111 dbSNP
rs1214699738 1115 dbSNP
rs1366708824 1122 dbSNP
rs1021966552 1127 dbSNP
rs966819393 1139 dbSNP
rs1338490053 1140 dbSNP
rs1438669736 1144 dbSNP
rs1464309394 1145 dbSNP
rs965644470 1147 dbSNP
rs551494712 1153 dbSNP
rs1273208391 1163 dbSNP
rs1366806301 1166 dbSNP
rs977780659 1167 dbSNP
rs765942773 1172 dbSNP
rs1388385228 1183 dbSNP
rs960424148 1191 dbSNP
rs1290138930 1205 dbSNP
rs975779397 1206 dbSNP
rs59304678 1212 dbSNP
rs531801952 1214 dbSNP
rs990668776 1215 dbSNP
rs1483118017 1220 dbSNP
rs1252452447 1221 dbSNP
rs570679748 1227 dbSNP
rs539398934 1230 dbSNP
rs916388173 1233 dbSNP
rs1314404281 1240 dbSNP
rs549933412 1246 dbSNP
rs1394112435 1247 dbSNP
rs1453011431 1248 dbSNP
rs1218711955 1251 dbSNP
rs1401229780 1255 dbSNP
rs146738330 1257 dbSNP
rs1438036408 1263 dbSNP
rs931596701 1267 dbSNP
rs573107111 1283 dbSNP
rs908930959 1289 dbSNP
rs1183464162 1295 dbSNP
rs1445262750 1298 dbSNP
rs1049409928 1311 dbSNP
rs941875801 1315 dbSNP
rs1036178012 1319 dbSNP
rs59743366 1324 dbSNP
rs907781455 1325 dbSNP
rs1179264504 1331 dbSNP
rs1482376974 1334 dbSNP
rs138963880 1336 dbSNP
rs1002791149 1337 dbSNP
rs115617706 1339 dbSNP
rs1266909295 1343 dbSNP
rs894491840 1360 dbSNP
rs934049698 1368 dbSNP
rs1307444634 1382 dbSNP
rs1411387041 1387 dbSNP
rs1012841032 1388 dbSNP
rs1348581166 1392 dbSNP
rs1307313555 1394 dbSNP
rs1021684360 1405 dbSNP
rs1425430073 1410 dbSNP
rs148999037 1418 dbSNP
rs1391701647 1420 dbSNP
rs187028036 1426 dbSNP
rs1049892984 1427 dbSNP
rs1407353778 1428 dbSNP
rs145713694 1429 dbSNP
rs1471799926 1433 dbSNP
rs574616174 1439 dbSNP
rs1251774773 1447 dbSNP
rs1200775598 1450 dbSNP
rs999458013 1452 dbSNP
rs544152573 1455 dbSNP
rs1268854688 1461 dbSNP
rs867915292 1478 dbSNP
rs764593192 1483 dbSNP
rs1410526145 1487 dbSNP
rs190269646 1494 dbSNP
rs1355247897 1502 dbSNP
rs1260899707 1509 dbSNP
rs1023001545 1513 dbSNP
rs966054190 1524 dbSNP
rs752024409 1525 dbSNP
rs1332699919 1528 dbSNP
rs1227521529 1537 dbSNP
rs1386231408 1540 dbSNP
rs757352795 1552 dbSNP
rs921479582 1557 dbSNP
rs953034833 1562 dbSNP
rs999217032 1573 dbSNP
rs781379209 1574 dbSNP
rs181884817 1584 dbSNP
rs1358010979 1590 dbSNP
rs756422410 1605 dbSNP
rs1177528315 1606 dbSNP
rs1226194449 1611 dbSNP
rs72796891 1627 dbSNP
rs1437857287 1628 dbSNP
rs990536255 1630 dbSNP
rs1023476846 1631 dbSNP
rs1262045389 1635 dbSNP
rs1210209168 1649 dbSNP
rs1463425955 1651 dbSNP
rs941783465 1653 dbSNP
rs1254559393 1655 dbSNP
rs1036645470 1658 dbSNP
rs1272975100 1659 dbSNP
rs919102371 1659 dbSNP
rs1181897253 1680 dbSNP
rs115969447 1690 dbSNP
rs1056990963 1691 dbSNP
rs1322871457 1699 dbSNP
rs1473979318 1702 dbSNP
rs907807005 1707 dbSNP
rs1337837737 1712 dbSNP
rs1416472354 1721 dbSNP
rs1423742842 1723 dbSNP
rs529421214 1725 dbSNP
rs1477448663 1730 dbSNP
rs972721064 1744 dbSNP
rs948746901 1754 dbSNP
rs1043050534 1764 dbSNP
rs749108540 1767 dbSNP
rs904638921 1779 dbSNP
rs1246991610 1780 dbSNP
rs1210612566 1785 dbSNP
rs998946789 1788 dbSNP
rs1413369588 1789 dbSNP
rs1430438301 1791 dbSNP
rs1032134700 1801 dbSNP
rs1339927819 1804 dbSNP
rs13406947 1805 dbSNP
rs998324012 1806 dbSNP
rs1226224041 1816 dbSNP
rs562603294 1817 dbSNP
rs1364760633 1818 dbSNP
rs147504211 1823 dbSNP
rs1334558720 1824 dbSNP
rs1450684987 1829 dbSNP
rs1341983965 1836 dbSNP
rs1357782264 1839 dbSNP
rs1334153929 1846 dbSNP
rs1411029986 1853 dbSNP
rs1049837399 1865 dbSNP
rs1169974589 1870 dbSNP
rs868243168 1874 dbSNP
rs1389205611 1877 dbSNP
rs985820655 1881 dbSNP
rs975123755 1882 dbSNP
rs1473687259 1888 dbSNP
rs1445573858 1893 dbSNP
rs1235535539 1894 dbSNP
rs1483359199 1897 dbSNP
rs1015929654 1900 dbSNP
rs946901650 1903 dbSNP
rs963336473 1904 dbSNP
rs551750283 1912 dbSNP
rs1229951520 1913 dbSNP
rs571591634 1919 dbSNP
rs938537469 1925 dbSNP
rs992602657 1927 dbSNP
rs1340656923 1929 dbSNP
rs768499027 1936 dbSNP
rs177083 1937 dbSNP
rs1306679288 1944 dbSNP
rs566392713 1950 dbSNP
rs1185902135 1951 dbSNP
rs1164794223 1956 dbSNP
rs1406742003 1959 dbSNP
rs1237085995 1964 dbSNP
rs896115767 1965 dbSNP
rs904525572 1971 dbSNP
rs566793701 1972 dbSNP
rs142457370 1977 dbSNP
rs1023840600 1981 dbSNP
rs951815637 1984 dbSNP
rs533762674 1990 dbSNP
rs1320179542 1997 dbSNP
rs760091037 2007 dbSNP
rs998376482 2008 dbSNP
rs1483382207 2030 dbSNP
rs535608479 2033 dbSNP
rs975931347 2040 dbSNP
rs890083334 2042 dbSNP
rs934025325 2045 dbSNP
rs79320426 2047 dbSNP
rs765785609 2048 dbSNP
rs568923883 2050 dbSNP
rs1322434880 2056 dbSNP
rs1412513297 2066 dbSNP
rs963091690 2070 dbSNP
rs537589157 2071 dbSNP
rs430759 2087 dbSNP
rs1425740392 2091 dbSNP
rs1193018054 2093 dbSNP
rs567535400 2095 dbSNP
rs992655055 2100 dbSNP
rs1209576514 2106 dbSNP
rs1466374695 2111 dbSNP
rs1266629475 2115 dbSNP
rs935573233 2120 dbSNP
rs538061688 2121 dbSNP
rs1436919245 2128 dbSNP
rs1294955654 2135 dbSNP
rs764396658 2137 dbSNP
rs978708789 2144 dbSNP
rs1364871566 2150 dbSNP
rs1324872589 2158 dbSNP
rs556351451 2159 dbSNP
rs1054532697 2164 dbSNP
rs759468094 2171 dbSNP
rs1318333088 2173 dbSNP
rs1456466658 2179 dbSNP
rs751895394 2180 dbSNP
rs1178130846 2188 dbSNP
rs1431566113 2195 dbSNP
rs1424564676 2197 dbSNP
rs554012587 2205 dbSNP
rs1189220280 2207 dbSNP
rs1451593831 2209 dbSNP
rs887535973 2213 dbSNP
rs934695099 2218 dbSNP
rs574003819 2225 dbSNP
rs767378191 2226 dbSNP
rs142515088 2231 dbSNP
rs1208624481 2234 dbSNP
rs1347794807 2236 dbSNP
rs767901377 2238 dbSNP
rs961890322 2239 dbSNP
rs1366948367 2243 dbSNP
rs750570591 2248 dbSNP
rs922709272 2252 dbSNP
rs145982750 2253 dbSNP
rs1379602363 2256 dbSNP
rs1049803632 2266 dbSNP
rs1190683123 2282 dbSNP
rs3210627 2284 dbSNP
rs867159963 2285 dbSNP
rs889967451 2288 dbSNP
rs985885271 2289 dbSNP
rs911198768 2295 dbSNP
rs968547877 2306 dbSNP
rs1448899063 2308 dbSNP
rs1199725623 2309 dbSNP
rs1180416685 2313 dbSNP
rs562790349 2317 dbSNP
rs1006107328 2321 dbSNP
rs1205317321 2322 dbSNP
rs1275916200 2322 dbSNP
rs531684746 2325 dbSNP
rs1343646082 2332 dbSNP
rs1272105544 2365 dbSNP
rs1226252170 2366 dbSNP
rs1340630630 2376 dbSNP
rs1038637104 2377 dbSNP
rs924020145 2392 dbSNP
rs897382362 2402 dbSNP
rs1308527125 2405 dbSNP
rs1171781032 2406 dbSNP
rs545204792 2407 dbSNP
rs780327317 2426 dbSNP
rs76678270 2436 dbSNP
rs918197114 2437 dbSNP
rs527655498 2442 dbSNP
rs1387489039 2446 dbSNP
rs1370379236 2448 dbSNP
rs116414477 2452 dbSNP
rs566732085 2457 dbSNP
rs1253223631 2458 dbSNP
rs1333318769 2460 dbSNP
rs1045137656 2479 dbSNP
rs529204887 2485 dbSNP
rs1006297104 2489 dbSNP
rs1394358302 2497 dbSNP
rs1022635629 2514 dbSNP
rs1356638520 2521 dbSNP
rs1266820165 2526 dbSNP
rs1330185352 2528 dbSNP
rs1211005884 2529 dbSNP
rs778893339 2542 dbSNP
rs897564191 2548 dbSNP
rs1210498419 2556 dbSNP
rs549195079 2557 dbSNP
rs997326348 2570 dbSNP
rs1030095282 2571 dbSNP
rs1328311863 2574 dbSNP
rs1387378969 2578 dbSNP
rs1393211308 2582 dbSNP
rs969877715 2597 dbSNP
rs569108784 2613 dbSNP
rs953311614 2615 dbSNP
rs560638999 2616 dbSNP
rs1459464042 2617 dbSNP
rs386644540 2617 dbSNP
rs747954749 2626 dbSNP
rs925913564 2627 dbSNP
rs184912580 2629 dbSNP
rs1269103884 2636 dbSNP
rs968116511 2645 dbSNP
rs988860871 2647 dbSNP
rs979834171 2650 dbSNP
rs1268531792 2652 dbSNP
rs922602445 2653 dbSNP
rs933947139 2658 dbSNP
rs772106066 2659 dbSNP
rs189865848 2660 dbSNP
rs80012377 2670 dbSNP
rs533517147 2700 dbSNP
rs1299544715 2705 dbSNP
rs941561838 2707 dbSNP
rs536811286 2708 dbSNP
rs1038931213 2719 dbSNP
rs77890389 2725 dbSNP
rs918055393 2727 dbSNP
rs1384937028 2746 dbSNP
rs1173658206 2759 dbSNP
rs1478108774 2761 dbSNP
rs1351690512 2765 dbSNP
rs948306664 2772 dbSNP
rs1191144793 2777 dbSNP
rs138582665 2783 dbSNP
rs1316554212 2787 dbSNP
rs542956427 2792 dbSNP
rs1245713034 2797 dbSNP
rs909445435 2812 dbSNP
rs1267476230 2813 dbSNP
rs770311154 2817 dbSNP
rs1056601628 2821 dbSNP
rs1036417890 2822 dbSNP
rs1254362157 2833 dbSNP
rs1233611130 2836 dbSNP
rs1277579164 2837 dbSNP
rs181180632 2841 dbSNP
rs1252404209 2844 dbSNP
rs1433423594 2847 dbSNP
rs1326205329 2850 dbSNP
rs371022606 2853 dbSNP
rs933044550 2854 dbSNP
rs1400629678 2861 dbSNP
rs895492987 2869 dbSNP
rs1179729435 2873 dbSNP
rs1171235455 2879 dbSNP
rs1433526196 2883 dbSNP
rs1390453431 2888 dbSNP
rs545603677 2897 dbSNP
rs776290286 2906 dbSNP
rs1022688143 2907 dbSNP
rs1424180015 2911 dbSNP
rs1166398741 2913 dbSNP
rs1187946441 2926 dbSNP
rs1051556848 2931 dbSNP
rs542973142 2939 dbSNP
rs1007804219 2943 dbSNP
rs550387665 2947 dbSNP
rs1277123040 2948 dbSNP
rs1168733485 2952 dbSNP
rs1371701237 2956 dbSNP
rs1226468280 2958 dbSNP
rs747531452 2961 dbSNP
rs1338917802 2969 dbSNP
rs561266677 2970 dbSNP
rs904426235 2975 dbSNP
rs1312779565 2978 dbSNP
rs1413694923 2991 dbSNP
rs35454566 2991 dbSNP
rs565196758 2992 dbSNP
rs1030983647 3010 dbSNP
rs141781870 3012 dbSNP
rs956020653 3015 dbSNP
rs774761861 3020 dbSNP
rs1397001111 3036 dbSNP
rs541389626 3041 dbSNP
rs992204578 3047 dbSNP
rs1473644654 3049 dbSNP
rs1025060382 3050 dbSNP
rs1187132798 3051 dbSNP
rs969616805 3058 dbSNP
rs186470412 3068 dbSNP
rs1202466448 3069 dbSNP
rs1437494783 3074 dbSNP
rs1290820621 3076 dbSNP
rs1320179666 3078 dbSNP
rs981333045 3079 dbSNP
rs1245307427 3080 dbSNP
rs1275512692 3087 dbSNP
rs909488933 3087 dbSNP
rs1344220663 3096 dbSNP
rs955379333 3102 dbSNP
rs1202852908 3103 dbSNP
rs1293282183 3103 dbSNP
rs1229549450 3106 dbSNP
rs1352801787 3119 dbSNP
rs529192408 3121 dbSNP
rs1439360832 3123 dbSNP
rs549327885 3125 dbSNP
rs918891969 3128 dbSNP
rs1415401830 3135 dbSNP
rs191788581 3147 dbSNP
rs1253618287 3151 dbSNP
rs531371051 3152 dbSNP
rs1051503162 3153 dbSNP
rs888859534 3156 dbSNP
rs1175595994 3158 dbSNP
rs1443696300 3162 dbSNP
rs551562189 3166 dbSNP
rs1188636178 3178 dbSNP
rs1469670579 3182 dbSNP
rs1391410649 3189 dbSNP
rs1427277448 3193 dbSNP
rs1167211395 3200 dbSNP
rs571211013 3201 dbSNP
rs1224039319 3206 dbSNP
rs941434734 3212 dbSNP
rs943246998 3214 dbSNP
rs1043264094 3220 dbSNP
rs1209693371 3221 dbSNP
rs1331898522 3223 dbSNP
rs1305467918 3224 dbSNP
rs904458517 3227 dbSNP
rs1371978911 3229 dbSNP
rs999144066 3231 dbSNP
rs1438189317 3241 dbSNP
rs974308715 3242 dbSNP
rs762067080 3247 dbSNP
rs1390806861 3248 dbSNP
rs533938085 3248 dbSNP
rs34518164 3255 dbSNP
rs1056655117 3256 dbSNP
rs1466843556 3257 dbSNP
rs1418644347 3267 dbSNP
rs150765804 3286 dbSNP
rs1377229669 3287 dbSNP
rs183308493 3298 dbSNP
rs949742936 3301 dbSNP
rs1192930684 3302 dbSNP
rs1025091399 3306 dbSNP
rs969858421 3306 dbSNP
rs1452271104 3315 dbSNP
rs868722302 3320 dbSNP
rs1367373475 3326 dbSNP
rs905644259 3332 dbSNP
rs1189671568 3338 dbSNP
rs1226303450 3349 dbSNP
rs1466522595 3373 dbSNP
rs536525288 3374 dbSNP
rs1215711561 3377 dbSNP
rs1272166341 3381 dbSNP
rs1278739522 3387 dbSNP
rs1235801685 3399 dbSNP
rs963672761 3405 dbSNP
rs972252359 3407 dbSNP
rs1435614533 3426 dbSNP
rs1363809912 3433 dbSNP
rs1000348330 3442 dbSNP
rs762386806 3443 dbSNP
rs891637769 3444 dbSNP
rs1010051761 3445 dbSNP
rs139207991 3450 dbSNP
rs955262377 3451 dbSNP
rs1208903851 3453 dbSNP
rs750828002 3456 dbSNP
rs1394772228 3465 dbSNP
rs1018690470 3468 dbSNP
rs6757121 3480 dbSNP
rs1451490619 3490 dbSNP
rs1260104150 3494 dbSNP
rs1186245485 3499 dbSNP
rs538813525 3501 dbSNP
rs918650338 3504 dbSNP
rs1185467986 3505 dbSNP
rs1212461061 3511 dbSNP
rs1345100093 3515 dbSNP
rs943088748 3517 dbSNP
rs1042908518 3523 dbSNP
rs779861179 3523 dbSNP
rs1293199124 3530 dbSNP
rs1381398611 3533 dbSNP
rs1379873368 3543 dbSNP
rs925737306 3544 dbSNP
rs1413084443 3547 dbSNP
rs868860007 3550 dbSNP
rs766517083 3559 dbSNP
rs753944402 3564 dbSNP
rs895721455 3566 dbSNP
rs1371513564 3572 dbSNP
rs1170238208 3573 dbSNP
rs1013614353 3574 dbSNP
rs918197991 3584 dbSNP
rs565180622 3585 dbSNP
rs1044079223 3587 dbSNP
rs1256207062 3588 dbSNP
rs1205187116 3600 dbSNP
rs568862786 3603 dbSNP
rs373000852 3604 dbSNP
rs149947086 3605 dbSNP
rs1054632941 3607 dbSNP
rs1391147960 3608 dbSNP
rs1016437471 3610 dbSNP
rs963922379 3612 dbSNP
rs891526051 3614 dbSNP
rs1269736767 3617 dbSNP
rs1354690363 3625 dbSNP
rs1308746890 3626 dbSNP
rs561246442 3643 dbSNP
rs779265141 3653 dbSNP
rs1220813038 3655 dbSNP
rs891089542 3660 dbSNP
rs574858978 3661 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aacAGGUAAC--AUAGACCCCUa 5'
             | | |||  || ||||||| 
Target 5' cacUACCUUGACUA-CUGGGGAa 3'
16 - 37
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_017964 | 3UTR | ACUGGGGAAAAUGAUACUUCGUAAAAUGUAAUAAGGCAACCUGUUCCUUGGCCUUUAUCUUAUGUUUUCCAACUAUUACU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_017964 | 3UTR | AAAGAAAUACAGCCUACACUACCUUGACUACUGGGGAAAAUGAUACUUCGUAAAAUGUAAUAAGGCAACCUGUUCCUUGGCCUUUAUCUUAUGUUUUCCAACUAUUACU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000282587.5 | 3UTR | AAGAAAUACAGCCUACACUACCUUGACUACUGGGGAAAAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
ESCA -0.561 0.04 -0.500 0.06 11 Click to see details
THCA 0.197 0.07 0.121 0.18 59 Click to see details
STAD -0.27 0.07 -0.149 0.21 32 Click to see details
LUSC 0.233 0.08 0.233 0.08 38 Click to see details
PAAD 0.81 0.1 0.800 0.1 4 Click to see details
KICH -0.213 0.15 -0.330 0.05 25 Click to see details
BLCA 0.226 0.18 0.273 0.14 18 Click to see details
PCPG 0.82 0.19 0.500 0.33 3 Click to see details
CESC -0.77 0.22 -0.500 0.33 3 Click to see details
KIRC -0.089 0.24 -0.106 0.19 68 Click to see details
PRAD -0.098 0.25 -0.166 0.12 50 Click to see details
HNSC -0.095 0.27 -0.132 0.2 42 Click to see details
LIHC -0.055 0.35 -0.070 0.32 49 Click to see details
LUAD 0.117 0.36 0.084 0.4 12 Click to see details
BRCA 0.02 0.43 0.024 0.41 84 Click to see details
CHOL 0.048 0.45 -0.117 0.38 9 Click to see details
KIRP -0.022 0.45 0.033 0.43 32 Click to see details
UCEC -0.011 0.48 0.075 0.38 19 Click to see details
UCEC -0.011 0.48 0.075 0.38 19 Click to see details
164 hsa-miR-2355-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT190653 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT286477 TAOK1 TAO kinase 1 2 4
MIRT318993 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT345622 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT442513 SYT7 synaptotagmin 7 2 4
MIRT444247 CTNND1 catenin delta 1 2 2
MIRT444780 ECE1 endothelin converting enzyme 1 2 2
MIRT456525 TMEM63A transmembrane protein 63A 2 2
MIRT468960 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469834 R3HDM4 R3H domain containing 4 2 2
MIRT470027 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT471167 PHB2 prohibitin 2 2 2
MIRT475819 HDGF heparin binding growth factor 2 4
MIRT479389 CDKN1B cyclin dependent kinase inhibitor 1B 2 6
MIRT481747 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT485220 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT487259 CCNF cyclin F 2 2
MIRT489971 MCC mutated in colorectal cancers 2 4
MIRT491399 C1D C1D nuclear receptor corepressor 2 2
MIRT494959 CCDC144A coiled-coil domain containing 144A 2 4
MIRT494979 PPP5D1 PPP5 tetratricopeptide repeat domain containing 1 2 2
MIRT495225 CHST14 carbohydrate sulfotransferase 14 2 2
MIRT496550 TBX15 T-box 15 2 2
MIRT501612 PISD phosphatidylserine decarboxylase 2 2
MIRT509393 TRIM24 tripartite motif containing 24 2 2
MIRT519616 ZNF788 zinc finger family member 788 2 4
MIRT519738 ZNF394 zinc finger protein 394 2 4
MIRT521230 SAR1A secretion associated Ras related GTPase 1A 2 4
MIRT521801 POM121C POM121 transmembrane nucleoporin C 2 2
MIRT526233 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT526932 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT529189 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT529329 ZNF649 zinc finger protein 649 2 2
MIRT529698 MRPL30 mitochondrial ribosomal protein L30 2 2
MIRT529921 TOP1MT DNA topoisomerase I mitochondrial 2 2
MIRT530032 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT530898 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT531621 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT533132 XIAP X-linked inhibitor of apoptosis 2 2
MIRT533210 WAPAL WAPL cohesin release factor 2 2
MIRT534058 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT535487 PARVB parvin beta 2 2
MIRT536749 HOXD9 homeobox D9 2 2
MIRT551456 CARKD NAD(P)HX dehydratase 2 2
MIRT551858 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT552095 FAM8A1 family with sequence similarity 8 member A1 2 2
MIRT552332 ZNF704 zinc finger protein 704 2 2
MIRT552549 ZFP36L2 ZFP36 ring finger protein like 2 2 2
MIRT561505 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT562702 ZNF415 zinc finger protein 415 2 2
MIRT563052 ZNF138 zinc finger protein 138 2 2
MIRT564592 ZNF791 zinc finger protein 791 2 2
MIRT566422 PIGA phosphatidylinositol glycan anchor biosynthesis class A 2 2
MIRT570176 RCBTB1 RCC1 and BTB domain containing protein 1 2 2
MIRT570866 ZNF525 zinc finger protein 525 2 2
MIRT570875 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571517 ZNF625 zinc finger protein 625 2 2
MIRT572551 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT610894 HINFP histone H4 transcription factor 2 2
MIRT611037 PTGES prostaglandin E synthase 2 2
MIRT611479 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT612419 SP1 Sp1 transcription factor 2 2
MIRT614478 FRMPD3 FERM and PDZ domain containing 3 2 2
MIRT616318 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT616929 ZNF638 zinc finger protein 638 2 2
MIRT618131 GABARAPL3 GABA type A receptor associated protein like 3 pseudogene 2 2
MIRT618452 ZFP30 ZFP30 zinc finger protein 2 4
MIRT620671 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT620713 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT621126 EMC7 ER membrane protein complex subunit 7 2 4
MIRT621443 TOMM22 translocase of outer mitochondrial membrane 22 2 2
MIRT623491 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT623783 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT623918 FNBP1L formin binding protein 1 like 2 2
MIRT625723 CXorf38 chromosome X open reading frame 38 2 2
MIRT625778 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT626940 TTR transthyretin 2 2
MIRT627357 TSC22D2 TSC22 domain family member 2 2 2
MIRT632078 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT633361 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT639793 MVK mevalonate kinase 2 2
MIRT643761 NAGK N-acetylglucosamine kinase 2 2
MIRT644358 NDUFAF6 NADH:ubiquinone oxidoreductase complex assembly factor 6 2 2
MIRT645558 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT646588 ANKRD36 ankyrin repeat domain 36 2 2
MIRT646631 SLC25A46 solute carrier family 25 member 46 2 2
MIRT648066 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT648142 SUCLG2 succinate-CoA ligase GDP-forming beta subunit 2 2
MIRT648416 MYOZ3 myozenin 3 2 2
MIRT649218 AMMECR1L AMMECR1 like 2 2
MIRT649772 MRPS27 mitochondrial ribosomal protein S27 2 4
MIRT650510 UFM1 ubiquitin fold modifier 1 2 2
MIRT651007 ZNF740 zinc finger protein 740 2 2
MIRT651524 WNT2B Wnt family member 2B 2 2
MIRT652014 TTYH3 tweety family member 3 2 2
MIRT652513 TMEM109 transmembrane protein 109 2 2
MIRT652686 THUMPD3 THUMP domain containing 3 2 2
MIRT652772 TENM3 teneurin transmembrane protein 3 2 2
MIRT653160 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT653765 SIX5 SIX homeobox 5 2 2
MIRT653792 SIRPA signal regulatory protein alpha 2 2
MIRT655649 OAZ2 ornithine decarboxylase antizyme 2 2 2
MIRT656263 MEX3A mex-3 RNA binding family member A 2 2
MIRT657044 KCNH6 potassium voltage-gated channel subfamily H member 6 2 2
MIRT657375 HMGA1 high mobility group AT-hook 1 2 2
MIRT657532 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT657542 GSTO2 glutathione S-transferase omega 2 2 2
MIRT657828 GJD3 gap junction protein delta 3 2 2
MIRT658946 DOK6 docking protein 6 2 2
MIRT660363 BACH2 BTB domain and CNC homolog 2 2 2
MIRT660406 ATXN7L3 ataxin 7 like 3 2 2
MIRT660948 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT661031 AAK1 AP2 associated kinase 1 2 2
MIRT662435 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT668419 FAM217B family with sequence similarity 217 member B 2 2
MIRT669332 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT676105 CLUAP1 clusterin associated protein 1 2 2
MIRT677084 SMIM15 small integral membrane protein 15 2 2
MIRT677127 OGFOD3 2-oxoglutarate and iron dependent oxygenase domain containing 3 2 2
MIRT678001 CPM carboxypeptidase M 2 2
MIRT678531 TMEM78 transmembrane protein 78 2 2
MIRT680000 ZNF860 zinc finger protein 860 2 2
MIRT680098 PXMP4 peroxisomal membrane protein 4 2 2
MIRT686795 SOX12 SRY-box 12 2 2
MIRT698887 SPTBN2 spectrin beta, non-erythrocytic 2 2 2
MIRT699371 SLC30A6 solute carrier family 30 member 6 2 2
MIRT702005 MIDN midnolin 2 2
MIRT708101 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT709563 GYG2 glycogenin 2 2 2
MIRT710559 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT710585 CDCA4 cell division cycle associated 4 2 2
MIRT710873 NT5DC1 5'-nucleotidase domain containing 1 2 2
MIRT711876 VASP vasodilator stimulated phosphoprotein 2 2
MIRT712226 RIMS3 regulating synaptic membrane exocytosis 3 2 2
MIRT713211 FAM13A family with sequence similarity 13 member A 2 2
MIRT713261 GPR55 G protein-coupled receptor 55 2 2
MIRT713327 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT713889 RNF19B ring finger protein 19B 2 2
MIRT714015 UBAP2L ubiquitin associated protein 2 like 2 2
MIRT714202 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT714717 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714748 ZNF385D zinc finger protein 385D 2 2
MIRT714806 ARHGEF19 Rho guanine nucleotide exchange factor 19 2 2
MIRT714852 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715717 MRPL4 mitochondrial ribosomal protein L4 2 2
MIRT715852 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT716853 MFSD12 major facilitator superfamily domain containing 12 2 2
MIRT717134 EBPL emopamil binding protein like 2 2
MIRT717248 TMEM246 transmembrane protein 246 2 2
MIRT717997 ZNF79 zinc finger protein 79 2 2
MIRT718341 PURA purine rich element binding protein A 2 2
MIRT719587 TFCP2L1 transcription factor CP2 like 1 2 2
MIRT720520 PTGR2 prostaglandin reductase 2 2 2
MIRT720671 SLC39A13 solute carrier family 39 member 13 2 2
MIRT721213 DCLK3 doublecortin like kinase 3 2 2
MIRT721757 INF2 inverted formin, FH2 and WH2 domain containing 2 2
MIRT721826 POU6F1 POU class 6 homeobox 1 2 2
MIRT722091 SUSD1 sushi domain containing 1 2 2
MIRT722275 LURAP1 leucine rich adaptor protein 1 2 2
MIRT722802 ARHGAP19 Rho GTPase activating protein 19 2 2
MIRT722866 FAM212B family with sequence similarity 212 member B 2 2
MIRT723113 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT724378 NEK8 NIMA related kinase 8 2 2
MIRT732775 PYCR1 pyrroline-5-carboxylate reductase 1 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2355 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Temozolomide 5394 NSC362856 approved resistant High Glioma tissue
hsa-miR-2355-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-2355-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-2355-5p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2355-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

Error report submission