miRTarBase - #MIRT699396


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pre-miRNA Information
pre-miRNA hsa-mir-2909   
Genomic Coordinates chr17: 37033745 - 37033813
Description Homo sapiens miR-2909 stem-loop
Comment This miRNA was referred to as hmiR-che-1 in .
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-2909
Sequence 4| GUUAGGGCCAACAUCUCUUGG |24
Evidence Experimental
Experiments QPCR
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs187707102 7 dbSNP
rs1375183104 8 dbSNP
rs1174848003 11 dbSNP
rs576577155 21 dbSNP
Putative Targets

Gene Information
Gene Symbol SLC2A1   
Synonyms CSE, DYT17, DYT18, DYT9, EIG12, GLUT, GLUT-1, GLUT1, GLUT1DS, HTLVR, PED, SDCHCN
Description solute carrier family 2 member 1
Transcript NM_006516   
Expression
Putative miRNA Targets on SLC2A1
3'UTR of SLC2A1
(miRNA target sites are highlighted)		 
>SLC2A1|NM_006516|3'UTR
   1 GTCGCCCCAGATCACCAGCCCGGCCTGCTCCCAGCAGCCCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTTC
  81 CAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGA
 161 CTTAACGGCTCCAGGATTTTAACAAAAGCAAGACTGTTGCTCAAATCTATTCAGACAAGCAACAGGTTTTATAATTTTTT
 241 TATTACTGATTTTGTTATTTTTATATCAGCCTGAGTCTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGC
 321 CTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGGACCTATGTCCTAAG
 401 GACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCT
 481 CCCCACTCTAGGGGTCAGGCTCCATTAGGATTTGCCCCTTCCCATCTCTTCCTACCCAACCACTCAAATTAATCTTTCTT
 561 TACCTGAGACCAGTTGGGAGCACTGGAGTGCAGGGAGGAGAGGGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCT
 641 TTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAGA
 721 CTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATATTTTTGGTTGTCAATATTAAATACAGACACTAAGTTATA
 801 GTATATCTGGACAAGCCAACTTGTAAATACACCACCTCACTCCTGTTACTTACCTAAACAGATATAAATGGCTGGTTTTT
 881 AGAAACATGGTTTTGAAATGCTTGTGGATTGAGGGTAGGAGGTTTGGATGGGAGTGAGACAGAAGTAAGTGGGGTTGCAA
 961 CCACTGCAACGGCTTAGACTTCGACTCAGGATCCAGTCCCTTACACGTACCTCTCATCAGTGTCCTCTTGCTCAAAAATC
1041 TGTTTGATCCCTGTTACCCAGAGAATATATACATTCTTTATCTTGACATTCAAGGCATTTCTATCACATATTTGATAGTT
1121 GGTGTTCAAAAAAACACTAGTTTTGTGCCAGCCGTGATGCTCAGGCTTGAAATGCATTATTTTGAATGTGAAGTAAATAC
1201 TGTACCTTTATTGGACAGGCTCAAAGAGGTTATGTGCCTGAAGTCGCACAGTGAATAAGCTAAAACACCTGCTTTTAACA
1281 ATGGTACCATACAACCACTACTCCATTAACTCCACCCACCTCCTGCACCCCTCCCCACACACACAAAATGAACCACGTTC
1361 TTTGTATGGGCCCAATGAGCTGTCAAGCTGCCCTGTGTTCATTTCATTTGGAATTGCCCCCTCTGGTTCCTCTGTATACT
1441 ACTGCTTCATCTCTAAAGACAGCTCATCCTCCTCCTTCACCCCTGAATTTCCAGAGCACTTCATCTGCTCCTTCATCACA
1521 AGTCCAGTTTTCTGCCACTAGTCTGAATTTCATGAGAAGATGCCGATTTGGTTCCTGTGGGTCCTCAGCACTATTCAGTA
1601 CAGTGCTTGATGCACAGCAGGCACTCAGAAAATACTGGAGGAAATAAAACACCAAAGATATTTGTCAAAAAAAAAAAAAA
1681 AAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gguucucuacaacCGGGAUUg 5'
                       ||||||| 
Target 5' cctgctcccagcaGCCCTAAg 3'
 24 - 44 140.00 -10.70
2 
miRNA  3' gguUCUCUAC----AACCGGGAUUg 5'
             ||:| ||    |  |:||||| 
Target 5' tgtAGGGCTGGACCTATGTCCTAAg 3'
 376 - 400 132.00 -10.10
3 
miRNA  3' ggUUCUCUACAAC-CGGGAUUg 5'
            |||||:|  || |||: || 
Target 5' caAAGAGGTTATGTGCCTGAAg 3'
 1222 - 1243 119.00 -11.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
378614 3 ClinVar
297378 22 ClinVar
297377 60 ClinVar
873892 92 ClinVar
876721 107 ClinVar
876720 216 ClinVar
876719 285 ClinVar
297376 322 ClinVar
297375 346 ClinVar
875727 368 ClinVar
875726 413 ClinVar
297374 462 ClinVar
875725 463 ClinVar
297373 514 ClinVar
297372 560 ClinVar
297371 571 ClinVar
297370 587 ClinVar
297369 597 ClinVar
873841 609 ClinVar
297368 626 ClinVar
297367 651 ClinVar
297366 750 ClinVar
876676 775 ClinVar
297365 784 ClinVar
297364 971 ClinVar
297363 1016 ClinVar
875681 1079 ClinVar
297362 1081 ClinVar
297361 1147 ClinVar
297360 1149 ClinVar
297359 1205 ClinVar
297358 1213 ClinVar
297357 1246 ClinVar
297356 1281 ClinVar
873784 1321 ClinVar
297354 1337 ClinVar
297355 1337 ClinVar
297353 1564 ClinVar
297352 1587 ClinVar
297351 1588 ClinVar
297350 1611 ClinVar
COSN26995167 22 COSMIC
COSN30452932 23 COSMIC
COSN30125056 31 COSMIC
COSN31486578 50 COSMIC
COSN30183273 80 COSMIC
COSN30155971 97 COSMIC
COSN6036166 100 COSMIC
COSN30457771 119 COSMIC
COSN31522303 158 COSMIC
COSN16130411 202 COSMIC
COSN16130412 212 COSMIC
COSN31519978 234 COSMIC
COSN20043526 329 COSMIC
COSN17665690 470 COSMIC
COSN28071365 511 COSMIC
COSN31576122 549 COSMIC
COSN31557146 609 COSMIC
COSN31529314 748 COSMIC
COSN31519121 754 COSMIC
COSN26649996 866 COSMIC
COSN31490576 983 COSMIC
COSN21607634 1337 COSMIC
COSN8470216 1389 COSMIC
COSN20800398 1659 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs369282116 3 dbSNP
rs780698077 4 dbSNP
rs1260477471 5 dbSNP
rs1227761746 10 dbSNP
rs377124350 11 dbSNP
rs1397570785 12 dbSNP
rs1318343281 17 dbSNP
rs539093384 21 dbSNP
rs2229683 22 dbSNP
rs1244812239 23 dbSNP
rs1382804667 33 dbSNP
rs368987954 37 dbSNP
rs894636163 40 dbSNP
rs751115453 41 dbSNP
rs750746923 42 dbSNP
rs765529555 44 dbSNP
rs1055832726 45 dbSNP
rs1347914614 50 dbSNP
rs143007380 57 dbSNP
rs2229684 60 dbSNP
rs1248679431 70 dbSNP
rs555449740 71 dbSNP
rs1353695350 72 dbSNP
rs928650277 86 dbSNP
rs1266657991 92 dbSNP
rs1197008785 101 dbSNP
rs1041683808 102 dbSNP
rs945954955 104 dbSNP
rs1446219353 106 dbSNP
rs1184031954 109 dbSNP
rs567585830 114 dbSNP
rs1398812093 119 dbSNP
rs977775794 124 dbSNP
rs1465151265 129 dbSNP
rs990464696 130 dbSNP
rs1204730460 136 dbSNP
rs1334252047 137 dbSNP
rs1384627814 138 dbSNP
rs963902478 140 dbSNP
rs1270394183 149 dbSNP
rs1253165412 162 dbSNP
rs911040111 164 dbSNP
rs548440696 166 dbSNP
rs867460317 167 dbSNP
rs1209585736 179 dbSNP
rs1261477900 193 dbSNP
rs11537638 209 dbSNP
rs1462776581 210 dbSNP
rs986561613 217 dbSNP
rs955074806 219 dbSNP
rs1299869517 225 dbSNP
rs1025735632 226 dbSNP
rs528394071 234 dbSNP
rs972466323 237 dbSNP
rs1346566976 238 dbSNP
rs760209478 239 dbSNP
rs962685635 249 dbSNP
rs533495666 254 dbSNP
rs1016547015 263 dbSNP
rs1432088344 264 dbSNP
rs1336586146 265 dbSNP
rs964552373 267 dbSNP
rs1385887500 273 dbSNP
rs559090534 273 dbSNP
rs1185548624 277 dbSNP
rs1427225376 279 dbSNP
rs1261716655 281 dbSNP
rs1018771665 282 dbSNP
rs144947295 285 dbSNP
rs1487022708 287 dbSNP
rs1354265998 288 dbSNP
rs1290056133 289 dbSNP
rs1006413463 294 dbSNP
rs750115904 300 dbSNP
rs1398775212 301 dbSNP
rs532032960 305 dbSNP
rs886046340 322 dbSNP
rs1325782888 329 dbSNP
rs1325792697 334 dbSNP
rs1296284032 338 dbSNP
rs1383855294 343 dbSNP
rs547016273 345 dbSNP
rs190760291 346 dbSNP
rs1446170573 348 dbSNP
rs774073882 351 dbSNP
rs1201659816 355 dbSNP
rs1366468048 356 dbSNP
rs1165538409 357 dbSNP
rs1197198052 360 dbSNP
rs1026782774 363 dbSNP
rs946103123 368 dbSNP
rs1372595405 369 dbSNP
rs1194441353 373 dbSNP
rs1430844407 374 dbSNP
rs1267154804 376 dbSNP
rs764359011 381 dbSNP
rs1490403187 384 dbSNP
rs1408556340 385 dbSNP
rs1331223634 393 dbSNP
rs1482995889 401 dbSNP
rs1044642562 404 dbSNP
rs1206159096 412 dbSNP
rs543194486 413 dbSNP
rs1301860731 418 dbSNP
rs530159487 433 dbSNP
rs1054403178 452 dbSNP
rs1224247205 453 dbSNP
rs948961795 460 dbSNP
rs942564433 461 dbSNP
rs4658 462 dbSNP
rs186437621 463 dbSNP
rs544915994 479 dbSNP
rs572786756 481 dbSNP
rs918375319 491 dbSNP
rs149912919 492 dbSNP
rs939135705 499 dbSNP
rs1192370363 510 dbSNP
rs886046339 514 dbSNP
rs1476150491 516 dbSNP
rs962427561 522 dbSNP
rs1420605359 525 dbSNP
rs1424479501 528 dbSNP
rs1162189308 531 dbSNP
rs1368079919 532 dbSNP
rs1308746224 534 dbSNP
rs1317657978 538 dbSNP
rs946420107 543 dbSNP
rs1016985417 551 dbSNP
rs1803656 555 dbSNP
rs778058974 557 dbSNP
rs545613558 560 dbSNP
rs1358440299 563 dbSNP
rs6413524 571 dbSNP
rs748209315 587 dbSNP
rs1359989331 591 dbSNP
rs1003036614 592 dbSNP
rs886046338 597 dbSNP
rs571963041 598 dbSNP
rs950569517 599 dbSNP
rs182061160 600 dbSNP
rs1020397288 609 dbSNP
rs1182192640 613 dbSNP
rs995303320 620 dbSNP
rs551911115 625 dbSNP
rs6413525 626 dbSNP
rs893154353 628 dbSNP
rs3199358 631 dbSNP
rs1054830130 638 dbSNP
rs942595529 639 dbSNP
rs1450735833 640 dbSNP
rs11933 650 dbSNP
rs886046337 651 dbSNP
rs1238178186 653 dbSNP
rs1277751905 661 dbSNP
rs1352172403 662 dbSNP
rs1262107412 673 dbSNP
rs1262069467 674 dbSNP
rs1205180644 681 dbSNP
rs1245313442 688 dbSNP
rs1445644561 694 dbSNP
rs1239354421 702 dbSNP
rs1057280018 704 dbSNP
rs1471199560 714 dbSNP
rs116589411 721 dbSNP
rs933839543 724 dbSNP
rs903326432 728 dbSNP
rs553897487 729 dbSNP
rs918395655 734 dbSNP
rs1383403227 736 dbSNP
rs1036799055 738 dbSNP
rs941081206 741 dbSNP
rs1390643339 745 dbSNP
rs558451502 748 dbSNP
rs1317619646 749 dbSNP
rs886046336 750 dbSNP
rs1282016278 757 dbSNP
rs534567652 758 dbSNP
rs55946822 759 dbSNP
rs1224918647 762 dbSNP
rs779010320 775 dbSNP
rs565643204 781 dbSNP
rs886046335 784 dbSNP
rs1195658219 786 dbSNP
rs1249022616 789 dbSNP
rs959029983 795 dbSNP
rs1803655 798 dbSNP
rs1439991456 801 dbSNP
rs974399828 810 dbSNP
rs1159299259 812 dbSNP
rs1479524203 820 dbSNP
rs1178811743 830 dbSNP
rs776804434 835 dbSNP
rs927585294 836 dbSNP
rs942982682 840 dbSNP
rs981647516 842 dbSNP
rs1296180394 845 dbSNP
rs1398372037 848 dbSNP
rs911814600 863 dbSNP
rs971613249 865 dbSNP
rs1020848521 868 dbSNP
rs191078912 869 dbSNP
rs919073445 874 dbSNP
rs1306622124 886 dbSNP
rs1165540757 887 dbSNP
rs973538318 896 dbSNP
rs1249931343 905 dbSNP
rs1445357680 909 dbSNP
rs1341933493 920 dbSNP
rs1206464113 927 dbSNP
rs565725067 938 dbSNP
rs1201755087 945 dbSNP
rs1268162604 951 dbSNP
rs1191686871 956 dbSNP
rs1428073296 958 dbSNP
rs1168644419 961 dbSNP
rs1033091847 964 dbSNP
rs146124093 968 dbSNP
rs1462350997 970 dbSNP
rs185891628 971 dbSNP
rs1363713151 972 dbSNP
rs1406235132 980 dbSNP
rs1262868372 982 dbSNP
rs180945925 983 dbSNP
rs1380116150 986 dbSNP
rs1205292474 994 dbSNP
rs549826405 998 dbSNP
rs1022953407 1006 dbSNP
rs754883273 1010 dbSNP
rs1358282484 1015 dbSNP
rs886046334 1016 dbSNP
rs529767041 1020 dbSNP
rs1357841392 1023 dbSNP
rs535038011 1024 dbSNP
rs1289201362 1046 dbSNP
rs541030660 1049 dbSNP
rs1266057508 1053 dbSNP
rs1485601868 1060 dbSNP
rs1035921346 1064 dbSNP
rs1247510127 1066 dbSNP
rs527328071 1070 dbSNP
rs1182825759 1073 dbSNP
rs1269483541 1076 dbSNP
rs1426402573 1079 dbSNP
rs886046333 1081 dbSNP
rs1428557710 1089 dbSNP
rs1451061815 1092 dbSNP
rs1290256413 1096 dbSNP
rs999482933 1097 dbSNP
rs998484867 1101 dbSNP
rs1451469400 1103 dbSNP
rs374283271 1110 dbSNP
rs1314731591 1113 dbSNP
rs1327922137 1121 dbSNP
rs896996858 1122 dbSNP
rs1248754192 1127 dbSNP
rs1314113927 1129 dbSNP
rs903378515 1135 dbSNP
rs886046332 1147 dbSNP
rs779668330 1149 dbSNP
rs941124280 1158 dbSNP
rs1262706436 1169 dbSNP
rs1404176684 1174 dbSNP
rs755954040 1176 dbSNP
rs1363910132 1180 dbSNP
rs1043615471 1183 dbSNP
rs1240999553 1193 dbSNP
rs1165760349 1194 dbSNP
rs886046331 1205 dbSNP
rs1010691204 1211 dbSNP
rs55728431 1213 dbSNP
rs1407245315 1218 dbSNP
rs937708372 1222 dbSNP
rs1166592577 1225 dbSNP
rs1412085054 1228 dbSNP
rs767196944 1230 dbSNP
rs761616024 1232 dbSNP
rs1374220179 1236 dbSNP
rs1198564024 1238 dbSNP
rs1334320629 1239 dbSNP
rs927616494 1245 dbSNP
rs886046330 1246 dbSNP
rs1373327908 1251 dbSNP
rs1224291854 1253 dbSNP
rs1222566594 1254 dbSNP
rs981678571 1255 dbSNP
rs545748402 1262 dbSNP
rs1057515458 1281 dbSNP
rs1271697542 1282 dbSNP
rs1329953724 1287 dbSNP
rs1223105907 1289 dbSNP
rs1261558775 1291 dbSNP
rs575867428 1297 dbSNP
rs576554735 1308 dbSNP
rs375354722 1312 dbSNP
rs1232098908 1318 dbSNP
rs1222650517 1321 dbSNP
rs113441673 1337 dbSNP
rs1178903404 1342 dbSNP
rs1412012137 1346 dbSNP
rs1479847187 1362 dbSNP
rs1051716608 1363 dbSNP
rs957552507 1369 dbSNP
rs929197989 1375 dbSNP
rs1416512671 1386 dbSNP
rs1405782294 1392 dbSNP
rs751092924 1400 dbSNP
rs1033122918 1405 dbSNP
rs973635179 1411 dbSNP
rs1351162352 1415 dbSNP
rs543077225 1417 dbSNP
rs1404476562 1419 dbSNP
rs1006960732 1420 dbSNP
rs1281611330 1421 dbSNP
rs116086414 1425 dbSNP
rs915996079 1429 dbSNP
rs1271964107 1434 dbSNP
rs991510346 1437 dbSNP
rs1305582503 1440 dbSNP
rs1223132643 1441 dbSNP
rs1206500945 1445 dbSNP
rs1252510532 1454 dbSNP
rs1029638232 1457 dbSNP
rs1411770070 1460 dbSNP
rs998124358 1465 dbSNP
rs1478116387 1468 dbSNP
rs1185591640 1470 dbSNP
rs1176369866 1477 dbSNP
rs1035641018 1479 dbSNP
rs1171023838 1481 dbSNP
rs553706134 1485 dbSNP
rs999140041 1491 dbSNP
rs1479638528 1496 dbSNP
rs371723320 1505 dbSNP
rs1431910452 1508 dbSNP
rs1301311852 1510 dbSNP
rs763728163 1512 dbSNP
rs1036950008 1518 dbSNP
rs1021845527 1530 dbSNP
rs1201785178 1536 dbSNP
rs1359577156 1545 dbSNP
rs1230408225 1553 dbSNP
rs531215584 1559 dbSNP
rs1358555674 1561 dbSNP
rs1057515570 1564 dbSNP
rs1273569193 1565 dbSNP
rs899978995 1568 dbSNP
rs1293258357 1577 dbSNP
rs1451704712 1582 dbSNP
rs140560514 1587 dbSNP
rs189700252 1588 dbSNP
rs558415488 1593 dbSNP
rs1284969283 1596 dbSNP
rs1223948431 1600 dbSNP
rs890150636 1601 dbSNP
rs1051867357 1602 dbSNP
rs1057515457 1611 dbSNP
rs1444514590 1614 dbSNP
rs929272400 1616 dbSNP
rs1444410314 1617 dbSNP
rs1392932159 1633 dbSNP
rs919174727 1635 dbSNP
rs1317891464 1636 dbSNP
rs538575828 1641 dbSNP
rs1343722229 1644 dbSNP
rs569804456 1650 dbSNP
rs1297982006 1658 dbSNP
rs1381794818 1661 dbSNP
rs937739331 1664 dbSNP
rs777289686 1666 dbSNP
rs1336572919 1670 dbSNP
rs549718956 1672 dbSNP
rs1285921200 1675 dbSNP
rs1468713844 1677 dbSNP
rs184901068 1680 dbSNP
rs1046448042 1682 dbSNP
rs181463076 1688 dbSNP
rs770113188 1689 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000426263.3 | 3UTR | AGGAUCUCUCAGGAGCACAGGCAGCUGGAUGAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
33 hsa-miR-2909 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT254788 XRCC6 X-ray repair cross complementing 6 2 4
MIRT464426 UHMK1 U2AF homology motif kinase 1 2 2
MIRT478185 DDX6 DEAD-box helicase 6 2 6
MIRT481768 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 2 2
MIRT489915 RTKN rhotekin 2 2
MIRT500566 VPS4A vacuolar protein sorting 4 homolog A 2 8
MIRT510700 SREK1IP1 SREK1 interacting protein 1 2 6
MIRT513331 CDK2 cyclin dependent kinase 2 2 4
MIRT524310 CTC1 CST telomere replication complex component 1 2 4
MIRT533571 TOMM40L translocase of outer mitochondrial membrane 40 like 2 2
MIRT537784 EIF4E3 eukaryotic translation initiation factor 4E family member 3 2 2
MIRT540489 ZMAT4 zinc finger matrin-type 4 2 8
MIRT547020 PPP1CB protein phosphatase 1 catalytic subunit beta 2 2
MIRT549561 C19orf12 chromosome 19 open reading frame 12 2 2
MIRT557346 HBP1 HMG-box transcription factor 1 2 4
MIRT564692 ZNF322P1 zinc finger protein 322 pseudogene 1 2 2
MIRT570167 LIPG lipase G, endothelial type 2 2
MIRT621677 UBE2QL1 ubiquitin conjugating enzyme E2 Q family like 1 2 2
MIRT629121 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 2 4
MIRT633745 MCM9 minichromosome maintenance 9 homologous recombination repair factor 2 2
MIRT634178 TXNDC16 thioredoxin domain containing 16 2 2
MIRT646387 SLC22A6 solute carrier family 22 member 6 2 2
MIRT651181 ZNF281 zinc finger protein 281 2 2
MIRT651892 UFD1L ubiquitin recognition factor in ER associated degradation 1 2 2
MIRT675180 KIF1C kinesin family member 1C 2 2
MIRT682670 CPM carboxypeptidase M 2 2
MIRT685990 NEK4 NIMA related kinase 4 2 2
MIRT698850 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT699396 SLC2A1 solute carrier family 2 member 1 2 2
MIRT723260 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 2 2
MIRT725320 NFASC neurofascin 2 2
MIRT734596 CD276 CD276 molecule 2 0
MIRT734938 PTEN phosphatase and tensin homolog 2 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-2909 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2909 Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide sensitive cell line (Bads-200)

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