pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PER2   
Synonyms FASPS, FASPS1
Description period circadian clock 2
Transcript NM_022817   
Expression
Putative miRNA Targets on PER2
3'UTR of PER2
(miRNA target sites are highlighted)
>PER2|NM_022817|3'UTR
   1 CCCCTGCCCCACCTCAGCCCGGCAGCCAGCGAGGTACACCAGGTGGTGCTTGGAAGAGATGAAAGATCTTCATGGCTGTT
  81 TCCACTGAAATGGACACATATGCTCATGTTGCTTTTTTTGTTTTAGAAAAAAAAACAACATAGTTTTCTGAAGGGGCGAC
 161 TTAAAACTGTGGAGAGTGGGGAGAGTTCGGAAAGAAATATGTTTTTATATATAAAATATATATGTGGAGTTTTGTGGGAT
 241 GGGGAAGAGATTTTAGTTGTTATTTAACTTGAGAAAGACTAAGCGCCTCTTAGTGTCAGGGAAGTTGCCTCAGTGCTCCC
 321 AGAAGTCCTGTGACTGTGACGAGACCTCTGTCTGCTGCACCAGCTGGGGACTCTGGCTTCCAGAGCTTTCCCAGGGTGTT
 401 TGGATCAGATCAAATTTTGTCCTCTCTTGGGGACTGCTTTTTATCTGAATTATCATTTAGTCAAGGTAGAGTGTTTTTTT
 481 ATACATACCAAATGGAGATAGCAGCCTCTCCTAGTTTTATTTCAAAACGTTTCACATTAAATGGTGTGAAGCGTTGTTTG
 561 GCAAACCAACAGCTTTGGCTTCTGGTGTGGTCAATATTTCAGTCTGACATAGGTTTTGTTTGTAGTGAACAAAGTTGAAA
 641 CATTTGCTCTGGACTAAAGAAGCCTAGTGGTTTGTGTGGCCAACTCCATCGGATGAATGCACACGCAGACAGACCCTCTG
 721 TATATTTCTGCATTATTCTTGTCTCCTTTTCAGACCATGATGGCCAATATGGAGATTAAAATATGTCATCAGTCATCTCT
 801 TTATGGTGACTTCCCTTTGCAAACCAGGCTGTGACCAACACATGTGAGACCCAGTCCTGTTTGGTTTTCTTCCGTTGGAA
 881 CCACCCAGACATCTGCTTCCACCCAGCCAAGCCCACATCACATCTCCTGGCCGAGAGCAGCCACTGCCACTCAGTCTGAC
 961 AGCTTGCGACTGCATCTGTATTTTCAGGGGTGCAGTGAGCTCACCTCTCCCACTGCACCCTGGGTTGGGTGCACAGCCCT
1041 CATTCTTTTCATGAGCCCGACCTCTCTCGGAGCAGCTTCAGGCCTCTGCCAGTGTCCCCAGCACTTTTAGGTCATTTGGA
1121 CACTTGGGGAAAAGTGAGGCCAGTCTGCCCGGCTTTTTACAAAACCTCATGTTGCATTGTATATTCCAAAGATGGTTCAG
1201 AAAATTTAATATTGGTCCCTGGTGGAAATTCAAAGTTATCACTGAAGAACAGTTGACTTAAAATTGGACCAAGACTATGA
1281 GGCTTAAAAGGGACCAGGGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGATGGAGTTTCTTTTTGCCCAGGCTGG
1361 AGTGCAGTGGCGCCATCTTGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTA
1441 GCTGGGACCACAGGCGACTGCCACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCC
1521 AGGCTGGTCTCGAACTCCTGACCTCAAGCGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC
1601 CACGCCCAACTGGGACCAGGGTTTTCTGTTTTTTGATGGAGGTGAAATCTCTTTGTAATCCACTAGGTTTTCATCGTAAA
1681 ACCATCTTATGCCTGACTATTAAACCTATTCTTCATAAACACAAGAACACTTTAATTTTTCGTTAATTTACAAAGTAACA
1761 TCAGCTGCCTATGCCTATGATAAGGTAGCAGTCTGCATTCTTATGGCCATTAGATGTTACAAACTCCTTGCCTCTAAAGT
1841 CAGATCATGAAGGGATAGGTGTTCATCTAAGGTTACAGTTATGTTACCGAAACACAAAACTGCCAAAATCTTACTCTGCT
1921 GTTATGAATGTTTACCATCAGCATTATTTTATCATTTAATATGTGCTCACTGATTGTTAACTGTAGCTTCAGCGCGTGCC
2001 AAGCAGTTGACTTAATAGGATCATCTTGTGAATTTGTTTACGTGATGCCAAGCATCAAGTCATGTTTTCTTTAGTGTGTG
2081 TGCTTACACAGGTGTTAAACAGTTTTTCTCTATTTTAAACTGAGCCTTCTTTTTAATATATTCCCGAAGAGATATGTAAA
2161 TAAGCTCTCAGAGTTTCTGTGATGATTTGTTGAGCCTTGCTGGACAAGTGGTTTGTTTGTGTGCAAACCAAACTTTCTTT
2241 ACCCAGTGCAATAGATTTGTTTGACTGCTTGTGTCTTTTTATGACCTGTTTGCCTTTTAGAAAATTGGTAAATAAAGCAA
2321 GTATATTTTTATTTTTA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||: ||||   ||||||| 
Target 5' cgATTCTCCTGCCTCAGCCTc 3'
1413 - 1433 156.00 -17.50
2
miRNA  3' gguagaAGGAAGUCGGAg 5'
                | :|||||:|| 
Target 5' ggtcaaTATTTCAGTCTg 3'
589 - 606 132.00 -9.90
3
miRNA  3' gguaGAAGG-AAGUCGGAg 5'
              || ||  ||||:|| 
Target 5' gccaCTGCCACTCAGTCTg 3'
940 - 958 130.00 -13.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30177533 3 COSMIC
COSN20047204 7 COSMIC
COSN29468560 18 COSMIC
COSN30171641 104 COSMIC
COSN31581570 126 COSMIC
COSN31514567 189 COSMIC
COSN8991256 243 COSMIC
COSN18794475 813 COSMIC
COSN17076426 1005 COSMIC
COSN17076427 1010 COSMIC
COSN24036399 1034 COSMIC
COSN17076428 1039 COSMIC
COSN20098005 1304 COSMIC
COSN6175838 1779 COSMIC
COSN22188164 1782 COSMIC
COSN30158196 2004 COSMIC
COSN28390861 2041 COSMIC
COSN17182954 2078 COSMIC
COSN26188999 2127 COSMIC
COSN31479719 2169 COSMIC
COSN31489902 2169 COSMIC
COSN31550456 2184 COSMIC
rs80261926 2146 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs769994015 1 dbSNP
rs760672398 2 dbSNP
rs781492589 2 dbSNP
rs1247426253 3 dbSNP
rs1362150091 5 dbSNP
rs757784043 7 dbSNP
rs1304045671 8 dbSNP
rs747292230 9 dbSNP
rs979163957 10 dbSNP
rs1332963510 11 dbSNP
rs916555139 13 dbSNP
rs778129323 15 dbSNP
rs758811895 17 dbSNP
rs372564023 20 dbSNP
rs755605691 21 dbSNP
rs1032254511 24 dbSNP
rs749956240 26 dbSNP
rs372988688 30 dbSNP
rs1453890648 31 dbSNP
rs761833629 33 dbSNP
rs1028281461 37 dbSNP
rs1179199467 43 dbSNP
rs966552705 45 dbSNP
rs1030609497 48 dbSNP
rs369936636 51 dbSNP
rs964476487 59 dbSNP
rs1371615964 68 dbSNP
rs10181662 72 dbSNP
rs1283618106 73 dbSNP
rs942111907 74 dbSNP
rs1215992496 76 dbSNP
rs1264384115 77 dbSNP
rs761718970 81 dbSNP
rs562978975 82 dbSNP
rs544396818 83 dbSNP
rs573824197 88 dbSNP
rs536228012 99 dbSNP
rs1047913605 107 dbSNP
rs949570204 112 dbSNP
rs566966877 120 dbSNP
rs1421743764 126 dbSNP
rs991095267 126 dbSNP
rs897290847 131 dbSNP
rs1047017165 133 dbSNP
rs1326629261 136 dbSNP
rs966418767 136 dbSNP
rs979088669 136 dbSNP
rs1166310031 137 dbSNP
rs1224014750 141 dbSNP
rs1375204520 141 dbSNP
rs531061658 143 dbSNP
rs867506073 148 dbSNP
rs1020692454 153 dbSNP
rs1475221128 156 dbSNP
rs949430246 157 dbSNP
rs986594943 158 dbSNP
rs759120200 160 dbSNP
rs1055173028 163 dbSNP
rs751770732 172 dbSNP
rs936674514 172 dbSNP
rs1028626939 179 dbSNP
rs1484962084 180 dbSNP
rs925302047 181 dbSNP
rs996791349 185 dbSNP
rs540295950 188 dbSNP
rs1205244347 189 dbSNP
rs1165824552 193 dbSNP
rs1422937702 194 dbSNP
rs1465044464 196 dbSNP
rs773939497 207 dbSNP
rs1016254380 209 dbSNP
rs1356183127 211 dbSNP
rs1006255568 219 dbSNP
rs1270304444 220 dbSNP
rs773987105 222 dbSNP
rs923105801 223 dbSNP
rs1356665294 224 dbSNP
rs1234679750 232 dbSNP
rs1293373820 234 dbSNP
rs1316707618 240 dbSNP
rs1217364681 250 dbSNP
rs1285709931 261 dbSNP
rs1231289313 264 dbSNP
rs1354741592 269 dbSNP
rs1308489639 275 dbSNP
rs975917066 284 dbSNP
rs573178304 285 dbSNP
rs1411599752 287 dbSNP
rs1484367871 296 dbSNP
rs1017362161 299 dbSNP
rs558092297 301 dbSNP
rs10181401 302 dbSNP
rs896665406 316 dbSNP
rs1421646201 318 dbSNP
rs1409573738 320 dbSNP
rs1175104835 327 dbSNP
rs753591008 329 dbSNP
rs1416274429 339 dbSNP
rs1055761098 340 dbSNP
rs187979399 341 dbSNP
rs925552303 344 dbSNP
rs1271430334 362 dbSNP
rs1340757426 365 dbSNP
rs1219098402 368 dbSNP
rs994404664 369 dbSNP
rs1276953226 375 dbSNP
rs556906779 376 dbSNP
rs897400407 395 dbSNP
rs945081669 396 dbSNP
rs913616860 398 dbSNP
rs1487427175 404 dbSNP
rs149923742 406 dbSNP
rs1013697234 413 dbSNP
rs568229120 418 dbSNP
rs185011361 430 dbSNP
rs1190510350 432 dbSNP
rs975676761 450 dbSNP
rs962646477 452 dbSNP
rs1174000787 453 dbSNP
rs1359581154 454 dbSNP
rs1481926556 460 dbSNP
rs1230649778 473 dbSNP
rs1326434522 474 dbSNP
rs34195482 481 dbSNP
rs546741922 485 dbSNP
rs766149071 486 dbSNP
rs1436433829 495 dbSNP
rs1016896282 500 dbSNP
rs1451807612 514 dbSNP
rs192462890 521 dbSNP
rs936789272 523 dbSNP
rs1333805736 528 dbSNP
rs570359671 529 dbSNP
rs1358272830 533 dbSNP
rs1451056513 535 dbSNP
rs1042801193 537 dbSNP
rs1013688671 546 dbSNP
rs552139488 553 dbSNP
rs1288772111 559 dbSNP
rs896584525 563 dbSNP
rs28391755 567 dbSNP
rs976034921 570 dbSNP
rs1159898453 572 dbSNP
rs1371144721 584 dbSNP
rs1404284825 585 dbSNP
rs188019851 594 dbSNP
rs1397392221 596 dbSNP
rs1441635848 621 dbSNP
rs904108845 625 dbSNP
rs910416277 627 dbSNP
rs1241472769 630 dbSNP
rs984510041 643 dbSNP
rs182553604 649 dbSNP
rs1328092018 652 dbSNP
rs1460094246 663 dbSNP
rs1025938034 665 dbSNP
rs972146734 669 dbSNP
rs1275115741 681 dbSNP
rs529461726 683 dbSNP
rs1469777927 690 dbSNP
rs971119082 691 dbSNP
rs139794176 696 dbSNP
rs933737693 697 dbSNP
rs1364081313 701 dbSNP
rs540338987 702 dbSNP
rs191440490 704 dbSNP
rs1406497762 710 dbSNP
rs1160962009 712 dbSNP
rs1176120493 715 dbSNP
rs781746114 716 dbSNP
rs1254350566 717 dbSNP
rs1211381258 726 dbSNP
rs1467776328 728 dbSNP
rs150630785 730 dbSNP
rs1398705471 738 dbSNP
rs1033825122 748 dbSNP
rs1000882688 750 dbSNP
rs547034369 755 dbSNP
rs903939074 758 dbSNP
rs1042358990 759 dbSNP
rs1268492883 762 dbSNP
rs1295208691 767 dbSNP
rs909765763 769 dbSNP
rs982707706 781 dbSNP
rs564372771 783 dbSNP
rs1283552800 784 dbSNP
rs1337361711 795 dbSNP
rs1219743628 798 dbSNP
rs950672294 802 dbSNP
rs1441490113 810 dbSNP
rs1026299768 816 dbSNP
rs1259027654 825 dbSNP
rs546159065 827 dbSNP
rs901865637 834 dbSNP
rs201144790 844 dbSNP
rs1169309288 846 dbSNP
rs1371922368 863 dbSNP
rs1040301621 873 dbSNP
rs533618820 874 dbSNP
rs377183778 883 dbSNP
rs1394541375 885 dbSNP
rs1034217508 893 dbSNP
rs1002335859 904 dbSNP
rs1399547123 911 dbSNP
rs62194934 915 dbSNP
rs943280270 922 dbSNP
rs1276368604 926 dbSNP
rs1324631904 929 dbSNP
rs62194933 929 dbSNP
rs910363917 932 dbSNP
rs984622588 933 dbSNP
rs1343809386 938 dbSNP
rs1208432928 945 dbSNP
rs1009794243 960 dbSNP
rs771308581 967 dbSNP
rs557310421 968 dbSNP
rs933686132 972 dbSNP
rs899578532 978 dbSNP
rs187828942 986 dbSNP
rs201970111 988 dbSNP
rs1376355304 995 dbSNP
rs1419265705 997 dbSNP
rs971876553 998 dbSNP
rs971453336 1004 dbSNP
rs1383870312 1007 dbSNP
rs182946457 1012 dbSNP
rs909734723 1015 dbSNP
rs992343008 1017 dbSNP
rs1305345396 1019 dbSNP
rs1453400269 1023 dbSNP
rs1248315099 1027 dbSNP
rs571355389 1031 dbSNP
rs1258468772 1033 dbSNP
rs553160876 1038 dbSNP
rs1484730413 1042 dbSNP
rs1267318959 1045 dbSNP
rs929862550 1049 dbSNP
rs917202843 1055 dbSNP
rs531024886 1058 dbSNP
rs1350016545 1059 dbSNP
rs1282541227 1061 dbSNP
rs1001450008 1063 dbSNP
rs904055876 1065 dbSNP
rs534746856 1066 dbSNP
rs56386336 1068 dbSNP
rs548277573 1069 dbSNP
rs1298519819 1071 dbSNP
rs1393722449 1079 dbSNP
rs1009682704 1080 dbSNP
rs755603841 1084 dbSNP
rs190397394 1090 dbSNP
rs1288685381 1094 dbSNP
rs943226267 1098 dbSNP
rs889042851 1100 dbSNP
rs1239006047 1102 dbSNP
rs377518375 1105 dbSNP
rs930468521 1114 dbSNP
rs1318319460 1124 dbSNP
rs1009720671 1126 dbSNP
rs1264289578 1130 dbSNP
rs1467529983 1139 dbSNP
rs749879928 1140 dbSNP
rs972213717 1143 dbSNP
rs1175812861 1148 dbSNP
rs949845241 1150 dbSNP
rs916893607 1151 dbSNP
rs899508963 1170 dbSNP
rs569515465 1177 dbSNP
rs1415689786 1179 dbSNP
rs1459842148 1181 dbSNP
rs1327780924 1187 dbSNP
rs991117977 1189 dbSNP
rs1441260444 1195 dbSNP
rs1296239112 1197 dbSNP
rs1375088422 1199 dbSNP
rs941070511 1205 dbSNP
rs1292168279 1206 dbSNP
rs1331967305 1215 dbSNP
rs1260740426 1217 dbSNP
rs1274391750 1221 dbSNP
rs1317833954 1235 dbSNP
rs888226461 1246 dbSNP
rs185782210 1248 dbSNP
rs35093813 1251 dbSNP
rs1255405252 1263 dbSNP
rs1181461274 1264 dbSNP
rs181992615 1273 dbSNP
rs1255525743 1276 dbSNP
rs979748924 1277 dbSNP
rs118094777 1278 dbSNP
rs1409290674 1279 dbSNP
rs1447267856 1284 dbSNP
rs1168063837 1286 dbSNP
rs1021135216 1289 dbSNP
rs1462197863 1291 dbSNP
rs559362199 1292 dbSNP
rs1251989912 1296 dbSNP
rs1229831892 1298 dbSNP
rs1306021328 1299 dbSNP
rs1353142736 1299 dbSNP
rs1416158167 1301 dbSNP
rs201968989 1304 dbSNP
rs71043120 1304 dbSNP
rs34391080 1305 dbSNP
rs369910850 1305 dbSNP
rs1275592409 1306 dbSNP
rs1357909648 1306 dbSNP
rs1311518958 1307 dbSNP
rs966120184 1307 dbSNP
rs1209828337 1309 dbSNP
rs1486775196 1310 dbSNP
rs993160095 1310 dbSNP
rs1018920762 1311 dbSNP
rs1188822223 1312 dbSNP
rs1414721419 1312 dbSNP
rs1262480026 1314 dbSNP
rs1261373465 1315 dbSNP
rs1184657549 1317 dbSNP
rs939339364 1319 dbSNP
rs1172774975 1321 dbSNP
rs1373296981 1322 dbSNP
rs1299427084 1327 dbSNP
rs1460135002 1328 dbSNP
rs1372209005 1331 dbSNP
rs1192785356 1333 dbSNP
rs1192988110 1333 dbSNP
rs1211814255 1333 dbSNP
rs1218001714 1333 dbSNP
rs1234106116 1333 dbSNP
rs1243837718 1333 dbSNP
rs1272482901 1333 dbSNP
rs1283678207 1333 dbSNP
rs1301688687 1333 dbSNP
rs1312965979 1333 dbSNP
rs1323841607 1333 dbSNP
rs1350343854 1333 dbSNP
rs1363235721 1333 dbSNP
rs1392961308 1333 dbSNP
rs1429272829 1333 dbSNP
rs1455333198 1333 dbSNP
rs1475691177 1333 dbSNP
rs71402776 1333 dbSNP
rs926636931 1333 dbSNP
rs138266537 1334 dbSNP
rs1348799004 1335 dbSNP
rs547668302 1336 dbSNP
rs1048893161 1339 dbSNP
rs1284973873 1343 dbSNP
rs930476784 1344 dbSNP
rs1212950200 1350 dbSNP
rs1250935897 1350 dbSNP
rs1476026871 1351 dbSNP
rs1415411946 1362 dbSNP
rs1199272081 1364 dbSNP
rs1232020170 1365 dbSNP
rs1007554966 1371 dbSNP
rs1483360699 1372 dbSNP
rs1461396817 1373 dbSNP
rs1163462867 1374 dbSNP
rs1251294974 1383 dbSNP
rs1197678325 1384 dbSNP
rs1264951203 1391 dbSNP
rs551204633 1396 dbSNP
rs1397286015 1400 dbSNP
rs1251034163 1403 dbSNP
rs528607346 1405 dbSNP
rs889158946 1413 dbSNP
rs1049431454 1414 dbSNP
rs1280239566 1423 dbSNP
rs980765102 1424 dbSNP
rs968091387 1425 dbSNP
rs1271244035 1428 dbSNP
rs1336850124 1430 dbSNP
rs1210274699 1432 dbSNP
rs532715211 1438 dbSNP
rs1233165732 1439 dbSNP
rs915361271 1452 dbSNP
rs994796306 1453 dbSNP
rs1435724435 1455 dbSNP
rs1183472093 1456 dbSNP
rs1252056723 1458 dbSNP
rs34621267 1472 dbSNP
rs1474615884 1474 dbSNP
rs1185147862 1488 dbSNP
rs1420728142 1493 dbSNP
rs988266337 1496 dbSNP
rs1308504416 1501 dbSNP
rs1389246915 1503 dbSNP
rs1411890138 1508 dbSNP
rs1329852726 1517 dbSNP
rs564590942 1523 dbSNP
rs956872853 1524 dbSNP
rs897625939 1528 dbSNP
rs998861256 1531 dbSNP
rs545945595 1532 dbSNP
rs1245342006 1535 dbSNP
rs1250583114 1539 dbSNP
rs1337257950 1542 dbSNP
rs1197297917 1549 dbSNP
rs1462715604 1550 dbSNP
rs964349380 1558 dbSNP
rs1208118129 1559 dbSNP
rs1391968628 1560 dbSNP
rs1424932400 1562 dbSNP
rs530960015 1563 dbSNP
rs1036218825 1564 dbSNP
rs1472863351 1566 dbSNP
rs761652101 1571 dbSNP
rs1169619017 1574 dbSNP
rs1375131055 1580 dbSNP
rs1433035484 1583 dbSNP
rs949768256 1584 dbSNP
rs1376106805 1587 dbSNP
rs1365519762 1591 dbSNP
rs1184070279 1592 dbSNP
rs1324609891 1596 dbSNP
rs1229407771 1598 dbSNP
rs751418240 1603 dbSNP
rs1346708690 1604 dbSNP
rs1208228217 1606 dbSNP
rs1281869976 1609 dbSNP
rs1249926223 1611 dbSNP
rs563629958 1621 dbSNP
rs542152380 1629 dbSNP
rs937006457 1630 dbSNP
rs773434724 1635 dbSNP
rs925649931 1639 dbSNP
rs1394791943 1643 dbSNP
rs1271638358 1649 dbSNP
rs1175710847 1656 dbSNP
rs993966476 1662 dbSNP
rs1453228670 1673 dbSNP
rs895653950 1674 dbSNP
rs763822043 1675 dbSNP
rs191938602 1676 dbSNP
rs1262944975 1691 dbSNP
rs1321012759 1695 dbSNP
rs1369908484 1699 dbSNP
rs763170230 1699 dbSNP
rs1237547058 1714 dbSNP
rs1045036481 1715 dbSNP
rs7563135 1730 dbSNP
rs1258373901 1737 dbSNP
rs966232291 1741 dbSNP
rs1019035410 1742 dbSNP
rs1368392030 1757 dbSNP
rs1007669480 1760 dbSNP
rs988194621 1764 dbSNP
rs1195887477 1767 dbSNP
rs1268386697 1773 dbSNP
rs956870309 1773 dbSNP
rs1324953691 1790 dbSNP
rs953346938 1793 dbSNP
rs922743154 1795 dbSNP
rs1365568484 1804 dbSNP
rs976975152 1808 dbSNP
rs1159878799 1819 dbSNP
rs1027670244 1824 dbSNP
rs995141524 1826 dbSNP
rs541196929 1832 dbSNP
rs1018575492 1835 dbSNP
rs1367884347 1852 dbSNP
rs1390396634 1853 dbSNP
rs1304277377 1860 dbSNP
rs1318151429 1864 dbSNP
rs1228451194 1870 dbSNP
rs897746578 1872 dbSNP
rs1273181277 1878 dbSNP
rs376315786 1881 dbSNP
rs1215953613 1883 dbSNP
rs1266332915 1887 dbSNP
rs765419990 1888 dbSNP
rs1175651643 1889 dbSNP
rs1252900095 1897 dbSNP
rs1363258299 1905 dbSNP
rs1187306542 1908 dbSNP
rs770068730 1909 dbSNP
rs1417153878 1911 dbSNP
rs1174380067 1913 dbSNP
rs1166657286 1915 dbSNP
rs1350215422 1916 dbSNP
rs1461196045 1920 dbSNP
rs1014035356 1925 dbSNP
rs1455737028 1925 dbSNP
rs762240006 1928 dbSNP
rs1251444001 1931 dbSNP
rs114881551 1936 dbSNP
rs558633580 1939 dbSNP
rs1230487671 1943 dbSNP
rs895591566 1951 dbSNP
rs1307332430 1962 dbSNP
rs563734979 1964 dbSNP
rs1055452915 1965 dbSNP
rs1202827962 1968 dbSNP
rs536719423 1970 dbSNP
rs1001412645 1973 dbSNP
rs867146324 1981 dbSNP
rs879025867 1983 dbSNP
rs1042732029 1993 dbSNP
rs186278761 1994 dbSNP
rs1203864288 1995 dbSNP
rs1350642153 1996 dbSNP
rs905773702 2000 dbSNP
rs1427749816 2001 dbSNP
rs1042958444 2003 dbSNP
rs946686572 2004 dbSNP
rs1235928680 2009 dbSNP
rs1345284557 2015 dbSNP
rs1302148645 2019 dbSNP
rs1373045267 2026 dbSNP
rs1449553901 2039 dbSNP
rs759698174 2041 dbSNP
rs554134930 2042 dbSNP
rs1052408704 2044 dbSNP
rs935400224 2046 dbSNP
rs1343146443 2049 dbSNP
rs1381545728 2050 dbSNP
rs1233793261 2053 dbSNP
rs1376059085 2062 dbSNP
rs1278317289 2064 dbSNP
rs1486725313 2069 dbSNP
rs1210871060 2070 dbSNP
rs988835836 2074 dbSNP
rs977320193 2080 dbSNP
rs1436587711 2083 dbSNP
rs942883566 2085 dbSNP
rs1393364650 2088 dbSNP
rs535793239 2089 dbSNP
rs1449721539 2090 dbSNP
rs1172680503 2091 dbSNP
rs541996384 2094 dbSNP
rs1172168427 2097 dbSNP
rs944836349 2098 dbSNP
rs1475884629 2100 dbSNP
rs142769788 2112 dbSNP
rs1191551374 2120 dbSNP
rs1334233739 2121 dbSNP
rs1345133332 2124 dbSNP
rs139566648 2125 dbSNP
rs952334655 2126 dbSNP
rs953462549 2127 dbSNP
rs1028031496 2128 dbSNP
rs972456501 2134 dbSNP
rs528701636 2138 dbSNP
rs1484369090 2139 dbSNP
rs570931405 2140 dbSNP
rs575111836 2141 dbSNP
rs146300001 2145 dbSNP
rs80261926 2146 dbSNP
rs565075240 2154 dbSNP
rs1226512100 2155 dbSNP
rs1206684759 2167 dbSNP
rs1249792177 2191 dbSNP
rs1021469426 2197 dbSNP
rs1192767522 2199 dbSNP
rs895622284 2201 dbSNP
rs1478774617 2208 dbSNP
rs1172663228 2210 dbSNP
rs1011429457 2211 dbSNP
rs1399490243 2213 dbSNP
rs1162063929 2214 dbSNP
rs1302874647 2219 dbSNP
rs1461313080 2221 dbSNP
rs891741702 2231 dbSNP
rs1412882542 2236 dbSNP
rs775339832 2239 dbSNP
rs1333643341 2251 dbSNP
rs1410727613 2255 dbSNP
rs745681818 2259 dbSNP
rs1166510646 2267 dbSNP
rs1230267160 2268 dbSNP
rs538260358 2280 dbSNP
rs563710993 2293 dbSNP
rs77799108 2300 dbSNP
rs778580038 2318 dbSNP
rs542238093 2319 dbSNP
rs904279773 2321 dbSNP
rs1190636531 2324 dbSNP
rs1453004229 2325 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguAGAAGGAAGUCGGAg 5'
             || | | ||||||| 
Target 5' -ucUCCUGCCUCAGCCUc 3'
1 - 17
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM4903829
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_a
Location of target site NM_022817 | 3UTR | CCUCAGCCUCCUGAGUAGCUGGGACCACAGGCGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903830
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_b
Location of target site NM_022817 | 3UTR | CCUCCUGAGUAGCUGGGACCACAGGCGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903831
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_a
Location of target site NM_022817 | 3UTR | CUCCUGAGUAGCUGGGACCACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903832
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_b
Location of target site NM_022817 | 3UTR | CUCCUGAGUAGCUGGGACCACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_022817 | 3UTR | AUCUUGGCUCACUGCAACCUCUGCCUCCCAGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGACCACAGGCGACUGCCACCACACCCAGCUAAUUUUUUGUAUUUUUAGUAGAGACAGGGUUUCACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_022817 | 3UTR | CCAUCUUGGCUCACUGCAACCUCUGCCUCCCAGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGACCACAGGCGACUGCCACCACACCCAGCUAAUUUUUUGUAUUUUUAGUAGAGACAGGGUUUCACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_022817 | 3UTR | UCUUGGCUCACUGCAACCUCUGCCUCCCAGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGACCACAGGCGACUGCCACCACACCCAGCUAAUUUUUUGUAUUUUUAGUAGAGACAGGGUUUCACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_022817 | 3UTR | CCCAGGCUGGAGUGCAGUGGCGCCAUCUUGGCUCACUGCAACCUCUGCCUCCCAGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGACCACAGGCGACUGCCACCACACCCAGCUAAUUUUUUGUAUUUUUAGUAGAGACAGGGUUUCACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_022817 | 3UTR | CAGCCUCCUGAGUAGCUGGGACCACAGGCGACUGCCACCACACCCAGCUAAUUUUUUGUAUUUUUAGUAGAGACAGGGUUUCACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 10 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_022817 | 3UTR | CUUGGCUCACUGCAACCUCUGCCUCCCAGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGACCACAGGCGACUGCCACCACACCCAGCUAAUUUUUUGUAUUUUUAGUAGAGACAGGGUUUCACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 11 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000254658.3 | 3UTR | UCUCCUGCCUCAGCCUCCUGAGUAGCUGGGACCAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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