pre-miRNA Information
pre-miRNA hsa-mir-7107   
Genomic Coordinates chr12: 121444273 - 121444352
Description Homo sapiens miR-7107 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-7107-5p
Sequence 6| UCGGCCUGGGGAGGAGGAAGGG |27
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs782634189 2 dbSNP
rs782536354 3 dbSNP
rs1230027540 4 dbSNP
rs539127530 5 dbSNP
rs782765349 9 dbSNP
rs55671311 10 dbSNP
rs183760300 11 dbSNP
rs782805318 12 dbSNP
rs782108772 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MYPN   
Synonyms CMD1DD, CMH22, MYOP, NEM11, RCM4
Description myopalladin
Transcript NM_032578   
Expression
Putative miRNA Targets on MYPN
3'UTR of MYPN
(miRNA target sites are highlighted)
>MYPN|NM_032578|3'UTR
   1 GAATGTCTAGGTACCTGCTGTGTAAGAGAGCGGACTGTGGAGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGC
  81 AACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGTGGCAAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAG
 161 TCTCAGCTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAA
 241 AGATGTCACACAGTTGCCATCCACTGCTTTGGGAAAAAACTAGCATGCTCCCCTGCTCCCTGTTGTGTTAGGGATGTTTA
 321 GGTCATACTAGGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCTTAGGATATGACTAACT
 401 CACCAAACAATGCCAAGGAGAAAGGCGGACAGGTCACCATCACCTTTCATCGATTACATGTATAGCAGTAGTTTTGGTGA
 481 ATTCACCAAATCAGCTTCCACTTAGCATTAGGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGC
 561 ATATCCTGGGTGTACTGAGCCACATAATAAGGTGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATAT
 641 TGCACAGTGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTCTTTTGGGTGGTGACTGTTT
 721 TTTTCTGACTTTGCATATCCCTAGACACTAGAACTAAAGGATTGGTAATAAACCAATCAGAAAGAAATCCTCTGTGGGGT
 801 CACTTTAAAAACTACTAGCTTCAACTACCACTTACAAAATGTGCAAGAGTCATCATTTGCCCATAAAATACACCTCATGG
 881 GCTCCTACCCCTTTCCCCAAAAGTCTGAAAGTGTAGGAGGAAGGAAGAGATACAAACAAGGAGAGGAAATGATGGGAGAG
 961 TGTTGTTTTTGTCACTTGCCCCAGCAGAGCAGGGGTTTTGGAAGGAGAGGTCTTTAATAGCTTTGAAATGCTTTGAGATC
1041 ATTGGTCAAATTGCATTTTCTATGTAGAGAATATTCTGCTAGGTGGAAAAGTTGGGAGAAAGGGGAATATGCATCTTTAT
1121 TCTAATCACCAATTCAAACCCTGCCTCTTAAGGAATTTTTAGACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAG
1201 TACCTAGCACAAAGTAGACATTCAATAAATATTTGCTGGTTGAATGAATCTTCTGTTATTATGTCTATTATAAGATAACC
1281 TAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACACTGCCCTGGGAATGCTCATCACAGCACAGTTT
1361 GCTCTAGGCTGTGCAGGGAAATGAATTGCAGGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCC
1441 AAGCACACTCAGCTGGCATTGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCACTTCAAGG
1521 CAAGGATTTCCAGCATAAAAATAAATTCATTCACTGGAGAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gggaaggAGGAGGGGUCCGGCu 5'
                 |:: |:|:||||:| 
Target 5' agcacagTTTGCTCTAGGCTGt 3'
1351 - 1372 123.00 -17.10
2
miRNA  3' gggaaGGAGGAGGGGUCCGGCu 5'
               || : | ||::|||:| 
Target 5' aggagCCATATGCCTGGGCTGa 3'
340 - 361 109.00 -18.60
3
miRNA  3' gggaaggaggagggGUCCGGcu 5'
                        ||||:|  
Target 5' aggagaaaggcggaCAGGTCac 3'
416 - 437 104.00 -7.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
671639 1 ClinVar
387610 6 ClinVar
1201820 291 ClinVar
COSN31562542 29 COSMIC
COSN31498280 32 COSMIC
COSN2525812 33 COSMIC
COSN30127452 46 COSMIC
COSN30455477 61 COSMIC
COSN22699173 69 COSMIC
COSN29513684 72 COSMIC
COSN26604953 81 COSMIC
COSN8640415 90 COSMIC
COSN30487625 101 COSMIC
COSN31509688 150 COSMIC
COSN31509674 151 COSMIC
COSN31489508 176 COSMIC
COSN30160075 201 COSMIC
COSN4716344 261 COSMIC
COSN31520240 284 COSMIC
COSN31486470 285 COSMIC
COSN31602680 391 COSMIC
COSN28907694 534 COSMIC
COSN29513699 540 COSMIC
COSN29211514 736 COSMIC
COSN5882237 837 COSMIC
COSN20107207 928 COSMIC
COSN1499010 996 COSMIC
COSN5882238 1485 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs539338042 1 dbSNP
rs1373996052 3 dbSNP
rs1421940761 4 dbSNP
rs1057522837 6 dbSNP
rs749762276 9 dbSNP
rs771288619 11 dbSNP
rs759619043 16 dbSNP
rs538795576 18 dbSNP
rs779170579 21 dbSNP
rs746080654 23 dbSNP
rs939221726 29 dbSNP
rs1315473600 30 dbSNP
rs781670467 30 dbSNP
rs370955104 32 dbSNP
rs747147639 33 dbSNP
rs768872780 34 dbSNP
rs773138815 37 dbSNP
rs945607196 38 dbSNP
rs762817420 41 dbSNP
rs546447610 44 dbSNP
rs1211327735 45 dbSNP
rs1267411567 46 dbSNP
rs766172764 47 dbSNP
rs1193518103 48 dbSNP
rs774050479 49 dbSNP
rs759180177 58 dbSNP
rs1159637821 59 dbSNP
rs1363655535 60 dbSNP
rs1261774656 61 dbSNP
rs903828466 63 dbSNP
rs1451861158 68 dbSNP
rs767214381 78 dbSNP
rs752359641 79 dbSNP
rs750883178 83 dbSNP
rs769430786 85 dbSNP
rs187853696 86 dbSNP
rs775245706 90 dbSNP
rs1028324916 94 dbSNP
rs1379157196 94 dbSNP
rs1482598127 96 dbSNP
rs1308239641 100 dbSNP
rs1314961091 103 dbSNP
rs372734206 107 dbSNP
rs1438495680 109 dbSNP
rs1265697303 120 dbSNP
rs758683747 121 dbSNP
rs780369235 129 dbSNP
rs772361836 130 dbSNP
rs747241469 131 dbSNP
rs756736938 134 dbSNP
rs768744850 135 dbSNP
rs1179867037 136 dbSNP
rs1348997960 137 dbSNP
rs776620387 138 dbSNP
rs749215179 142 dbSNP
rs770836566 148 dbSNP
rs1008049072 149 dbSNP
rs1015828228 162 dbSNP
rs1369281698 168 dbSNP
rs1460924239 170 dbSNP
rs1162873449 172 dbSNP
rs774182728 173 dbSNP
rs961340223 179 dbSNP
rs117014451 180 dbSNP
rs1370859814 181 dbSNP
rs575231907 184 dbSNP
rs537970618 191 dbSNP
rs557265984 192 dbSNP
rs370535978 198 dbSNP
rs1231149432 203 dbSNP
rs1259417221 209 dbSNP
rs1318044916 211 dbSNP
rs1199772660 225 dbSNP
rs998419694 232 dbSNP
rs753329495 239 dbSNP
rs1184286944 247 dbSNP
rs1028531330 259 dbSNP
rs757779682 266 dbSNP
rs1358443126 269 dbSNP
rs765726256 270 dbSNP
rs1474995518 271 dbSNP
rs80123789 272 dbSNP
rs1185598302 274 dbSNP
rs1186138727 275 dbSNP
rs1425831819 280 dbSNP
rs954392875 281 dbSNP
rs577475117 288 dbSNP
rs758771751 289 dbSNP
rs150489652 291 dbSNP
rs1224829774 293 dbSNP
rs1328823664 295 dbSNP
rs34929388 298 dbSNP
rs1379161285 303 dbSNP
rs914039707 305 dbSNP
rs977765815 306 dbSNP
rs1445230917 313 dbSNP
rs1354651258 314 dbSNP
rs1412499429 317 dbSNP
rs747208896 318 dbSNP
rs1384325367 326 dbSNP
rs77243223 345 dbSNP
rs1456334099 348 dbSNP
rs576373869 352 dbSNP
rs1160938062 355 dbSNP
rs1295408265 356 dbSNP
rs572400609 360 dbSNP
rs1413055512 378 dbSNP
rs1180022736 382 dbSNP
rs1212927197 383 dbSNP
rs1222207318 388 dbSNP
rs1256931859 392 dbSNP
rs768472620 397 dbSNP
rs1485572712 399 dbSNP
rs1208951279 401 dbSNP
rs1265642360 403 dbSNP
rs990768713 404 dbSNP
rs541891459 405 dbSNP
rs1250126674 406 dbSNP
rs1217023620 408 dbSNP
rs1321469534 417 dbSNP
rs1461799929 418 dbSNP
rs1186010837 420 dbSNP
rs1417546216 423 dbSNP
rs1434826365 427 dbSNP
rs1176771947 428 dbSNP
rs1374577911 431 dbSNP
rs1315066986 433 dbSNP
rs781324101 438 dbSNP
rs1433907001 439 dbSNP
rs1299587693 440 dbSNP
rs1360770387 443 dbSNP
rs916466159 445 dbSNP
rs748230333 450 dbSNP
rs1369166353 451 dbSNP
rs769929432 452 dbSNP
rs1304850751 453 dbSNP
rs778754931 454 dbSNP
rs1168111928 456 dbSNP
rs745834764 460 dbSNP
rs1288349048 463 dbSNP
rs771804637 469 dbSNP
rs1215412600 470 dbSNP
rs909967848 479 dbSNP
rs940136241 490 dbSNP
rs891237814 492 dbSNP
rs774746262 493 dbSNP
rs1489521649 497 dbSNP
rs1008247423 502 dbSNP
rs1394411776 504 dbSNP
rs1452280626 506 dbSNP
rs1160225215 508 dbSNP
rs1036884401 516 dbSNP
rs762155040 517 dbSNP
rs775314406 519 dbSNP
rs562188194 521 dbSNP
rs1351066378 522 dbSNP
rs1436609975 523 dbSNP
rs1488376833 525 dbSNP
rs1327084261 534 dbSNP
rs772622783 535 dbSNP
rs995441459 537 dbSNP
rs773608931 540 dbSNP
rs760684177 541 dbSNP
rs1351894687 542 dbSNP
rs1223406032 544 dbSNP
rs573596383 549 dbSNP
rs1323513519 550 dbSNP
rs1214415859 551 dbSNP
rs1252520939 560 dbSNP
rs1467082106 561 dbSNP
rs761173943 566 dbSNP
rs969962308 574 dbSNP
rs138268569 575 dbSNP
rs1001236714 578 dbSNP
rs1355850564 580 dbSNP
rs562141434 582 dbSNP
rs1299157552 584 dbSNP
rs901223465 587 dbSNP
rs1214758974 588 dbSNP
rs530906809 589 dbSNP
rs1366678940 593 dbSNP
rs1415513717 593 dbSNP
rs764564544 601 dbSNP
rs1291519255 602 dbSNP
rs1405381770 606 dbSNP
rs1035342681 608 dbSNP
rs149201880 611 dbSNP
rs1374821067 616 dbSNP
rs988943613 616 dbSNP
rs1050441220 617 dbSNP
rs763579247 618 dbSNP
rs1423509382 625 dbSNP
rs1011511042 626 dbSNP
rs1336690511 631 dbSNP
rs1441943453 634 dbSNP
rs1277948002 635 dbSNP
rs1381603007 649 dbSNP
rs1234206023 652 dbSNP
rs766816415 654 dbSNP
rs1332832455 661 dbSNP
rs1480961755 662 dbSNP
rs1251792755 664 dbSNP
rs1200405464 671 dbSNP
rs1273668052 675 dbSNP
rs1436944387 680 dbSNP
rs876489 684 dbSNP
rs1239045954 686 dbSNP
rs532913377 690 dbSNP
rs967267234 694 dbSNP
rs1311185674 697 dbSNP
rs546410569 698 dbSNP
rs1414987359 701 dbSNP
rs1298718482 706 dbSNP
rs753964716 710 dbSNP
rs1478527231 712 dbSNP
rs925571495 718 dbSNP
rs932890994 730 dbSNP
rs1409958370 736 dbSNP
rs1327265843 737 dbSNP
rs1361305546 739 dbSNP
rs1407867263 740 dbSNP
rs1415606478 741 dbSNP
rs1398743543 744 dbSNP
rs1309550615 745 dbSNP
rs1465603234 746 dbSNP
rs1357702739 747 dbSNP
rs1292933110 749 dbSNP
rs1353600952 752 dbSNP
rs192430229 763 dbSNP
rs1270636251 765 dbSNP
rs1411639594 766 dbSNP
rs1338652118 777 dbSNP
rs1489779122 782 dbSNP
rs960367991 785 dbSNP
rs944147068 790 dbSNP
rs1485902477 791 dbSNP
rs990444652 792 dbSNP
rs759719729 798 dbSNP
rs1254971702 799 dbSNP
rs765506186 802 dbSNP
rs1482629413 809 dbSNP
rs1193264981 813 dbSNP
rs1372069666 815 dbSNP
rs143346187 816 dbSNP
rs995788596 836 dbSNP
rs1427641999 837 dbSNP
rs1435762486 841 dbSNP
rs1324024307 844 dbSNP
rs1312431018 848 dbSNP
rs1267194179 849 dbSNP
rs985097160 861 dbSNP
rs1402142548 864 dbSNP
rs1319058467 865 dbSNP
rs137922290 866 dbSNP
rs1395575648 869 dbSNP
rs1225121506 873 dbSNP
rs1276564591 875 dbSNP
rs1348271896 877 dbSNP
rs905809073 882 dbSNP
rs1388387111 889 dbSNP
rs1001435977 890 dbSNP
rs1163590066 892 dbSNP
rs1364941675 895 dbSNP
rs781212389 898 dbSNP
rs1205399832 899 dbSNP
rs752968210 912 dbSNP
rs568879266 917 dbSNP
rs201204017 925 dbSNP
rs111667972 927 dbSNP
rs3217542 927 dbSNP
rs771254181 927 dbSNP
rs66943529 928 dbSNP
rs1255448005 931 dbSNP
rs377538665 933 dbSNP
rs1037113359 934 dbSNP
rs1423073691 938 dbSNP
rs922655918 942 dbSNP
rs1240671573 944 dbSNP
rs1185066047 954 dbSNP
rs1173389270 956 dbSNP
rs959666106 957 dbSNP
rs1455512262 958 dbSNP
rs537455141 959 dbSNP
rs1430631558 971 dbSNP
rs1268545105 974 dbSNP
rs1159412962 980 dbSNP
rs1009996797 981 dbSNP
rs933997400 983 dbSNP
rs1352548212 984 dbSNP
rs1215413877 985 dbSNP
rs1243926414 996 dbSNP
rs1049727655 1000 dbSNP
rs1325384225 1005 dbSNP
rs71541556 1006 dbSNP
rs968488901 1009 dbSNP
rs757015375 1017 dbSNP
rs1300947872 1018 dbSNP
rs1355651546 1027 dbSNP
rs1044351158 1029 dbSNP
rs1239256862 1030 dbSNP
rs1259817069 1031 dbSNP
rs1384313128 1032 dbSNP
rs1347841033 1039 dbSNP
rs902717378 1044 dbSNP
rs1032453827 1052 dbSNP
rs777850596 1055 dbSNP
rs954311130 1057 dbSNP
rs1382858003 1060 dbSNP
rs1487954525 1061 dbSNP
rs1165004569 1064 dbSNP
rs564628158 1065 dbSNP
rs550909458 1066 dbSNP
rs1193602888 1077 dbSNP
rs1444701580 1081 dbSNP
rs1034769648 1083 dbSNP
rs1421270705 1087 dbSNP
rs1182746907 1088 dbSNP
rs1363439155 1093 dbSNP
rs1448554487 1097 dbSNP
rs985646766 1104 dbSNP
rs1209181585 1110 dbSNP
rs772039763 1111 dbSNP
rs1395367378 1114 dbSNP
rs912569232 1118 dbSNP
rs1323834738 1120 dbSNP
rs1673 1121 dbSNP
rs746838400 1123 dbSNP
rs972758953 1124 dbSNP
rs1391765625 1129 dbSNP
rs1305777531 1130 dbSNP
rs1180943683 1140 dbSNP
rs750357456 1141 dbSNP
rs1246619121 1145 dbSNP
rs1273234391 1149 dbSNP
rs1403485765 1154 dbSNP
rs984762384 1156 dbSNP
rs1333577621 1162 dbSNP
rs1015250588 1164 dbSNP
rs1304256425 1165 dbSNP
rs1271858806 1176 dbSNP
rs1369362259 1183 dbSNP
rs1481782845 1184 dbSNP
rs1165815401 1193 dbSNP
rs1196736226 1199 dbSNP
rs1446079895 1201 dbSNP
rs1250340283 1204 dbSNP
rs1197993562 1205 dbSNP
rs1165931583 1211 dbSNP
rs41278500 1218 dbSNP
rs975851106 1219 dbSNP
rs116456902 1221 dbSNP
rs60688485 1224 dbSNP
rs41278502 1225 dbSNP
rs911249656 1226 dbSNP
rs769383469 1230 dbSNP
rs1462484291 1233 dbSNP
rs1340400509 1239 dbSNP
rs1274473134 1242 dbSNP
rs1297390265 1245 dbSNP
rs1394115235 1246 dbSNP
rs1416218042 1247 dbSNP
rs1293549909 1248 dbSNP
rs1354222639 1253 dbSNP
rs1222116056 1268 dbSNP
rs555466407 1269 dbSNP
rs1291908234 1270 dbSNP
rs1248425772 1273 dbSNP
rs1309781583 1274 dbSNP
rs1205885780 1275 dbSNP
rs1409702525 1276 dbSNP
rs1334675986 1277 dbSNP
rs566706752 1280 dbSNP
rs1411154657 1290 dbSNP
rs1315524754 1300 dbSNP
rs772885977 1306 dbSNP
rs1396846836 1307 dbSNP
rs1043991259 1310 dbSNP
rs1213239828 1311 dbSNP
rs1203350070 1321 dbSNP
rs570474566 1323 dbSNP
rs1485352864 1324 dbSNP
rs935503015 1328 dbSNP
rs544281572 1329 dbSNP
rs1429017743 1334 dbSNP
rs1169711229 1338 dbSNP
rs896640716 1339 dbSNP
rs564212978 1344 dbSNP
rs768419414 1345 dbSNP
rs1184146347 1347 dbSNP
rs767047177 1351 dbSNP
rs881976 1356 dbSNP
rs1278236065 1357 dbSNP
rs112100404 1363 dbSNP
rs1326132338 1368 dbSNP
rs1290089307 1370 dbSNP
rs881975 1374 dbSNP
rs1215622309 1376 dbSNP
rs1295539942 1378 dbSNP
rs1349248182 1380 dbSNP
rs1306062433 1384 dbSNP
rs1032484774 1388 dbSNP
rs1281566165 1391 dbSNP
rs1014798278 1393 dbSNP
rs1347421450 1398 dbSNP
rs1209045453 1406 dbSNP
rs1243896033 1410 dbSNP
rs961914285 1411 dbSNP
rs1185815797 1413 dbSNP
rs1259576096 1415 dbSNP
rs747970724 1419 dbSNP
rs1405496629 1427 dbSNP
rs1449935587 1431 dbSNP
rs529169188 1440 dbSNP
rs2278675 1441 dbSNP
rs777801208 1444 dbSNP
rs1160870920 1445 dbSNP
rs1345230190 1446 dbSNP
rs142475557 1453 dbSNP
rs1401789275 1456 dbSNP
rs1288740859 1457 dbSNP
rs1363626607 1458 dbSNP
rs1019865897 1460 dbSNP
rs1243973668 1463 dbSNP
rs1304586208 1464 dbSNP
rs1315484312 1465 dbSNP
rs551108204 1468 dbSNP
rs1217637504 1471 dbSNP
rs758319728 1477 dbSNP
rs771465374 1479 dbSNP
rs1215168377 1483 dbSNP
rs374837300 1485 dbSNP
rs1259095735 1493 dbSNP
rs979817843 1496 dbSNP
rs1194242506 1497 dbSNP
rs118157288 1504 dbSNP
rs746974707 1506 dbSNP
rs1178508898 1512 dbSNP
rs1243128153 1520 dbSNP
rs918579591 1526 dbSNP
rs935597566 1527 dbSNP
rs1056711128 1528 dbSNP
rs937118224 1531 dbSNP
rs1399814875 1532 dbSNP
rs1401161405 1533 dbSNP
rs1334971135 1537 dbSNP
rs77248736 1541 dbSNP
rs1396081752 1546 dbSNP
rs367673718 1548 dbSNP
rs945965986 1549 dbSNP
rs1186121322 1555 dbSNP
rs1327189438 1557 dbSNP
rs1044830761 1558 dbSNP
rs887486800 1562 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gggaaggaggaggggUCCGGCu 5'
                         |||||| 
Target 5' ucccagcacuuuaggAGGCCGa 3'
6 - 27
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000358913.5 | 3UTR | UGCAAUCCCAGCACUUUAGGAGGCCGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
144 hsa-miR-7107-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT060580 CCND1 cyclin D1 2 4
MIRT451035 ZNF610 zinc finger protein 610 2 2
MIRT485711 CASP16 caspase 16, pseudogene 2 8
MIRT488402 TDRKH tudor and KH domain containing 2 2
MIRT492084 TCF21 transcription factor 21 2 2
MIRT504213 VAV3 vav guanine nucleotide exchange factor 3 2 13
MIRT505723 SERTAD3 SERTA domain containing 3 2 4
MIRT509007 FBXO6 F-box protein 6 2 2
MIRT509843 FOS Fos proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT514761 RBM4B RNA binding motif protein 4B 2 2
MIRT515664 LRRC27 leucine rich repeat containing 27 2 2
MIRT516316 F8A2 coagulation factor VIII associated 2 2 2
MIRT516342 F8A3 coagulation factor VIII associated 3 2 2
MIRT517139 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT518746 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519299 MLH1 mutL homolog 1 2 2
MIRT521527 QSOX1 quiescin sulfhydryl oxidase 1 2 4
MIRT531756 TXK TXK tyrosine kinase 2 2
MIRT542208 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542235 FUT9 fucosyltransferase 9 2 2
MIRT542791 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT554378 SETD5 SET domain containing 5 2 2
MIRT569908 PCSK9 proprotein convertase subtilisin/kexin type 9 2 2
MIRT570222 SLC27A1 solute carrier family 27 member 1 2 2
MIRT570976 RGS19 regulator of G protein signaling 19 2 2
MIRT573046 SHMT1 serine hydroxymethyltransferase 1 2 2
MIRT574954 Vav3 vav 3 oncogene 2 8
MIRT609297 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT612990 GBX2 gastrulation brain homeobox 2 2 2
MIRT613851 SHB SH2 domain containing adaptor protein B 2 2
MIRT613935 POLR3A RNA polymerase III subunit A 2 2
MIRT614243 WDR53 WD repeat domain 53 2 4
MIRT615158 SPIB Spi-B transcription factor 2 2
MIRT616145 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT616389 C1orf87 chromosome 1 open reading frame 87 2 2
MIRT617737 ATCAY ATCAY, caytaxin 2 4
MIRT621449 TCN2 transcobalamin 2 2 2
MIRT625784 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT628556 MELK maternal embryonic leucine zipper kinase 2 2
MIRT632041 ZNF430 zinc finger protein 430 2 2
MIRT634937 GTF2H2C GTF2H2 family member C 2 4
MIRT637208 MEAF6 MYST/Esa1 associated factor 6 2 2
MIRT637610 LOH12CR1 BLOC-1 related complex subunit 5 2 2
MIRT637832 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT638107 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT638387 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT641689 SPCS1 signal peptidase complex subunit 1 2 2
MIRT642611 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT643850 LACTB lactamase beta 2 4
MIRT649575 PALD1 phosphatase domain containing, paladin 1 2 2
MIRT649860 WDR12 WD repeat domain 12 2 2
MIRT651026 ZNF699 zinc finger protein 699 2 2
MIRT652336 TMOD3 tropomodulin 3 2 4
MIRT653286 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 2 2
MIRT656292 METTL14 methyltransferase like 14 2 2
MIRT656458 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT659539 CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 2 2
MIRT661537 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT668042 GTPBP10 GTP binding protein 10 2 2
MIRT668147 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT668800 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT669818 STOML1 stomatin like 1 2 2
MIRT670490 DCUN1D2 defective in cullin neddylation 1 domain containing 2 2 2
MIRT670615 NPHP1 nephrocystin 1 2 2
MIRT670892 CYTIP cytohesin 1 interacting protein 2 2
MIRT670943 LIPG lipase G, endothelial type 2 2
MIRT671268 MTRNR2L5 MT-RNR2-like 5 2 2
MIRT671903 GBP4 guanylate binding protein 4 2 2
MIRT672239 ABHD15 abhydrolase domain containing 15 2 2
MIRT672326 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT673113 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT674412 GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 2 2
MIRT677718 IRF1 interferon regulatory factor 1 2 2
MIRT678585 PPP1R3B protein phosphatase 1 regulatory subunit 3B 2 2
MIRT678726 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT679338 ISG20L2 interferon stimulated exonuclease gene 20 like 2 2 2
MIRT679614 RRP36 ribosomal RNA processing 36 2 2
MIRT679695 SLC1A5 solute carrier family 1 member 5 2 4
MIRT679715 RPL24 ribosomal protein L24 2 2
MIRT680065 CD96 CD96 molecule 2 2
MIRT683379 ESR2 estrogen receptor 2 2 2
MIRT683683 MICA MHC class I polypeptide-related sequence A 2 2
MIRT683865 OCIAD1 OCIA domain containing 1 2 2
MIRT684073 TLR7 toll like receptor 7 2 2
MIRT684126 CEP104 centrosomal protein 104 2 2
MIRT684485 GPR137B G protein-coupled receptor 137B 2 2
MIRT684736 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT684778 MYO1F myosin IF 2 2
MIRT685028 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT685189 DCTN5 dynactin subunit 5 2 2
MIRT685307 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT685514 MSH3 mutS homolog 3 2 2
MIRT685702 BHMT2 betaine--homocysteine S-methyltransferase 2 2 2
MIRT685944 PTGIS prostaglandin I2 synthase 2 2
MIRT686311 VPS53 VPS53, GARP complex subunit 2 2
MIRT686686 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT687641 LRIF1 ligand dependent nuclear receptor interacting factor 1 2 2
MIRT687923 HOOK3 hook microtubule tethering protein 3 2 2
MIRT688117 GEMIN8 gem nuclear organelle associated protein 8 2 2
MIRT688460 DNAJB4 DnaJ heat shock protein family (Hsp40) member B4 2 2
MIRT688629 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT688823 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT689117 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT689166 ZNF665 zinc finger protein 665 2 2
MIRT690070 MBD1 methyl-CpG binding domain protein 1 2 2
MIRT690733 IRAK4 interleukin 1 receptor associated kinase 4 2 2
MIRT691324 KIAA1841 KIAA1841 2 2
MIRT691517 ZNF682 zinc finger protein 682 2 2
MIRT691607 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT692314 RFK riboflavin kinase 2 2
MIRT692376 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT692436 METTL8 methyltransferase like 8 2 2
MIRT692782 SYNPO2L synaptopodin 2 like 2 2
MIRT693136 THEM4 thioesterase superfamily member 4 2 2
MIRT693422 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT693871 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT694049 PRIM1 DNA primase subunit 1 2 2
MIRT694092 KIAA0930 KIAA0930 2 2
MIRT694190 ZNF347 zinc finger protein 347 2 2
MIRT695177 SLC25A33 solute carrier family 25 member 33 2 2
MIRT696180 GNB5 G protein subunit beta 5 2 2
MIRT697387 ZMAT3 zinc finger matrin-type 3 2 2
MIRT698924 SPEM1 spermatid maturation 1 2 2
MIRT699314 SLC35F5 solute carrier family 35 member F5 2 4
MIRT701106 PAPD5 poly(A) RNA polymerase D5, non-canonical 2 2
MIRT701575 MYPN myopalladin 2 2
MIRT701825 MRPL37 mitochondrial ribosomal protein L37 2 2
MIRT702047 METTL21A methyltransferase like 21A 2 2
MIRT703034 HAS2 hyaluronan synthase 2 2 4
MIRT704143 DNAL1 dynein axonemal light chain 1 2 2
MIRT704759 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT705079 C4orf29 abhydrolase domain containing 18 2 2
MIRT705346 ATP1B3 ATPase Na+/K+ transporting subunit beta 3 2 2
MIRT706104 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT709070 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT709534 ZBED1 zinc finger BED-type containing 1 2 2
MIRT712356 NAT14 N-acetyltransferase 14 (putative) 2 2
MIRT713713 PAOX polyamine oxidase 2 2
MIRT714304 ZNF454 zinc finger protein 454 2 2
MIRT714919 PPP1R12C protein phosphatase 1 regulatory subunit 12C 2 2
MIRT715792 TBL3 transducin beta like 3 2 2
MIRT717376 RBM41 RNA binding motif protein 41 2 2
MIRT719069 ACOX1 acyl-CoA oxidase 1 2 2
MIRT724548 HAUS2 HAUS augmin like complex subunit 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-7107-5p Docetaxel 148124 NSC628503 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-7107-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-7107-5p Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-7107-5p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (SW480, HCT-116)
hsa-miR-7107-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-7107-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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