miRTarBase - #MIRT701721


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pre-miRNA Information
pre-miRNA hsa-mir-3160-1   
Genomic Coordinates chr11: 46451805 - 46451889
Description Homo sapiens miR-3160-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3160-2   
Genomic Coordinates chr11: 46451807 - 46451887
Description Homo sapiens miR-3160-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3160-3p
Sequence 54| AGAGCUGAGACUAGAAAGCCCA |75
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30582333 1 COSMIC
COSN1535547 3 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1396368683 1 dbSNP
rs1162409303 2 dbSNP
rs1404378453 12 dbSNP
rs1171960732 14 dbSNP
rs1324633375 16 dbSNP
rs1187765019 16 dbSNP
rs1300058326 19 dbSNP
rs1432898407 21 dbSNP
rs1011279103 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MTMR12   
Synonyms 3-PAP, PIP3AP
Description myotubularin related protein 12
Transcript NM_001040446   
Expression
Putative miRNA Targets on MTMR12
3'UTR of MTMR12
(miRNA target sites are highlighted)		 
>MTMR12|NM_001040446|3'UTR
   1 CCTGTTTGTTGAGTGATTGTGAAAGAGGAATGTGGGAGATTGGGACAGCTGATCCCTGGATTTGTGTCACGCTACAGCTC
  81 ATGCTGGCTGGGTCCTTAGCCCGGCACTCCGTTAGAATAAACCTGGGCCTTCGGGAAAAGAGGTGGCTCTCATTATTTTT
 161 CATGATTCTAAAAGACTATGCAATTAAAACCGCATCTGTAGTATTACTAATTGGAAGGAATTATTACTTGACCCGTAATA
 241 GGGTTGTGGCCGTTTTCTGATGCCTAAGTATTATACAGAGCCCACAATGGCCAGTTTACTACCAGAAAGGGCTTCAGTAA
 321 GATATTCTTGGACTTGATACTTTCTTCAGATCCTCTTTGTGCCAAGATAATTTATCCAGTCATTGGGAATAGTAAGTTTC
 401 TGTGTAACCCATCTCAATTATAGAAGCAAGTTCAGCTTTATGTATTTGTATGGGGAGTTGAAGATTCAGATAGAGGTATT
 481 AAGATGTGTGGCATTTACTTAAACCATCACATTTTTTTCTTTCTACGCCCCCTTGCCTGTAAAACACCTGGGAAGTTCCA
 561 CTGGTGTCATCCATCCTGATGCTTCAGACCACCCTCCCTTCTTCACAGACCGTGTCACTTTGCCTGTGGGTGGGGGCTAG
 641 CCAGCCACCACCCTCTTTTCTGTGCTGCCAGCCCCAGGTCTTCCTCCGCCTGCTCCACACCACTCGCCGCTGTCCCTCTG
 721 CACTCCCTGCCTTGGTGCGTGTAGTCCCAGTGTCTCACTGCCAAACCTCTTGGTTACGCTGCGGGGATCTGTTTCTTTGC
 801 CTGAGATCCTTCCTGAGGAGCGTCCATTCCTCTGGAGTCTCTCCTTGTTTGGAACAAATCGCTTCGCCTTTTTCTACTTG
 881 CCTGCTGAAGCTTTGGAGCACTTGTGATTGCAGTTTTCTGCCGCAACCCCTGAGCCGAGTTCCTCACATTCTTTTACCTT
 961 TATGGACTGATGGGATTGGGTCACTTTTGAATGTGGCTTTCATAGGAAAGCAGCTTAAACATAAATATCAGAAGTGATGA
1041 TTATCATATGATACCTCAGTGATTTTAAAAGCCATAGAAGAAACTTGACTATGCCTGGTCACCTTCTTGGATCTGCTGTC
1121 TAAATGATATATATATGATATATATGTGATATATATATATCATATATATGATATATATATATATATCACATATATATGAT
1201 ATATATATGATATATATATATCACATATATATGATATATATATCATATATATGATATATATTTTTTTTAATGCAGGAAAG
1281 TATACTTTGTAAGGAGCAGATTTTTTTGTTCTCAGTGGAACCCTGTCAAATCGCATAAAAGAGGAAAAAAACAAAACTCA
1361 TTAGAATGTTTTAAATTGAATGTTCGCCTTTTACATATATTTGCTCTTCAGTATGGATCCCAATTTGAATGTTACATGTT
1441 CGGAAAAACTTTCAGTTGCTCAAGGGCAATAAGAAAATTTGAGGCCGGGTGTGGTGGCTCACGCCTGTAATCCCAGCACT
1521 TTGGGAGGCTCAGGTGGGCGAATTGCTTGAGCCCAGGAGTTCGAGACCAGCCGGGGCAACATGGCAAAACCCTGTCTCTA
1601 CTAAAAATACAAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCC
1681 CGTGAGCCTGGGAGGTGGAGTTTGCAGTGAGCTAAGATCGTGCCACTGCACTCCGGCCTGGGTGATGGAGCAAGACCTCG
1761 TCTCAGAAAATTGGAAACTATTGACTAAGAGAAGTTTCTAGGTTTGCACTGAATTGTCTTTTGTACATACAGTGAATTGT
1841 TTTGCTGTTCTCCCCACTCCATATTAATGCAGGAGCCAGGTTGGTCTGTTAGGATGAACAAAGGTTGAGGGGAGGGCAGG
1921 ATTCGTGCATCTGGGGGCCAAACACATGTTCCGTCTTGATTGCCTTAAGAGTTACTAGCGAGGTCAGTGTTAGGCTTGCA
2001 ATAGGGATTTTAAAATACACTAACTAGTTCCTTAGCTACCTTCACATACATTCTATAGGCCTTCTTAAATTAGCACTAAC
2081 CTCCACTTCCTTCTCTGCCCCATTGCCTCCCAAATATGCTATGGAGCTATTTTTGTTACCACGTTATAACGTGAATATTT
2161 ATACAGTAGCCTCTTCAGGCTTTGTAATTTTCATTCCAAAAATGCCCGGTGTGATGCTTTACACTCTACAAAGTATGGTT
2241 TAAAGGCACAAGGTCATGGCCTTTGTCATAGCAGTTGAATGTGCATTGACATATTTTTCTATGATTTTTTAAAATTACAA
2321 TAGAAAAATAAGCTGTTGTAACGTGTAAGGTCATGACAATTTTTGTATTTATATTTGAAATCAGATTTCTATAACTCGTA
2401 TTTGTGTACAGAATTCTCAATGGATTTATATATTGTGAAATTTTTATCTGAGATTGGGATGTGGATTATGCTTAACAGTG
2481 AGAGCTGAAATGAGACCATTTACTTTGTTTAAAATGCTGTACTGTGCAAGTTTGGAAATGTAAATTAATTTACTGTATAT
2561 AATATCTTGAGTTTGTTTATACCTCCAAGTTTTTACACTGAAGATAAACTAGCTTTAATTCAAAACTTTTTTTTTCTTTA
2641 TAAGGGAATAAGCTGTTGAGCTAAACCTGTATACTTGTGCTTTTTATTTTCTGGATGCACAATGAAAGTTTATACTTGTA
2721 TCTCACTGCATCATATCTGATTGCAGAAATTAAAGCACAATTTACAAGCAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' acccgaaaGAUCAGAGUCGAGa 5'
                  | ||| ||||||: 
Target 5' tatagaagCAAGT-TCAGCTTt 3'
 419 - 439 133.00 -10.10
2 
miRNA  3' acccGAAAGAUCA--GAGUCGAga 5'
              ||  |||||  ||:||||  
Target 5' tacaCTAACTAGTTCCTTAGCTac 3'
 2016 - 2039 128.00 -13.20
3 
miRNA  3' acCCGAAAGAUCA----GA-GUCGAGa 5'
            || ||| | ||    || |||||| 
Target 5' ctGGATTTGT-GTCACGCTACAGCTCa 3'
 56 - 81 125.00 -11.44
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30568043 1 COSMIC
COSN20080964 8 COSMIC
COSN30161465 11 COSMIC
COSN30103135 22 COSMIC
COSN30454886 34 COSMIC
COSN30473405 42 COSMIC
COSN30135833 52 COSMIC
COSN20040954 70 COSMIC
COSN20075392 87 COSMIC
COSN30178304 111 COSMIC
COSN31610593 111 COSMIC
COSN30503314 123 COSMIC
COSN30163391 140 COSMIC
COSN26507414 207 COSMIC
COSN20075373 240 COSMIC
COSN31514885 316 COSMIC
COSN31517041 372 COSMIC
COSN26647386 428 COSMIC
COSN20620945 632 COSMIC
COSN1315079 671 COSMIC
COSN7937950 860 COSMIC
COSN31523502 949 COSMIC
COSN22862380 1103 COSMIC
COSN31541650 1113 COSMIC
COSN7937949 1198 COSMIC
COSN20314206 1200 COSMIC
COSN31829086 1200 COSMIC
COSN9432776 1218 COSMIC
COSN9432775 1224 COSMIC
COSN24950689 1720 COSMIC
COSN21298294 1787 COSMIC
COSN31537764 1924 COSMIC
COSN31484592 1931 COSMIC
COSN6294246 1970 COSMIC
COSN17181739 1979 COSMIC
COSN31546638 2010 COSMIC
COSN31591711 2053 COSMIC
COSN29463052 2143 COSMIC
COSN31539611 2150 COSMIC
COSN28661446 2310 COSMIC
COSN31564623 2343 COSMIC
COSN21484222 2372 COSMIC
COSN28228740 2400 COSMIC
COSN19547497 2420 COSMIC
COSN30543334 2448 COSMIC
COSN31552235 2457 COSMIC
COSN31552647 2516 COSMIC
COSN7937948 2527 COSMIC
COSN31570190 2566 COSMIC
COSN31519046 2613 COSMIC
COSN31514017 2630 COSMIC
COSN31517307 2634 COSMIC
COSN21568456 2637 COSMIC
COSN27065973 2646 COSMIC
COSN26562488 2707 COSMIC
COSN28759591 2724 COSMIC
COSN31479517 2758 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs776965674 1 dbSNP
rs1426590266 2 dbSNP
rs201423963 5 dbSNP
rs368036723 8 dbSNP
rs768950685 11 dbSNP
rs1199758337 12 dbSNP
rs1211683486 13 dbSNP
rs1272296705 14 dbSNP
rs747340996 16 dbSNP
rs753692523 19 dbSNP
rs1206594412 25 dbSNP
rs916561256 29 dbSNP
rs1233998105 32 dbSNP
rs1454082305 40 dbSNP
rs763891436 45 dbSNP
rs780572480 50 dbSNP
rs1192205514 54 dbSNP
rs1348623856 64 dbSNP
rs900186832 70 dbSNP
rs560074467 71 dbSNP
rs963559743 78 dbSNP
rs1395066788 82 dbSNP
rs1407748684 87 dbSNP
rs1330779339 89 dbSNP
rs1355093845 97 dbSNP
rs1439880201 100 dbSNP
rs112050634 102 dbSNP
rs552934327 103 dbSNP
rs769021562 110 dbSNP
rs955031027 111 dbSNP
rs989408033 114 dbSNP
rs1392973884 115 dbSNP
rs74722143 117 dbSNP
rs1312143611 132 dbSNP
rs1468470276 133 dbSNP
rs1212202854 135 dbSNP
rs1255210077 141 dbSNP
rs371152445 143 dbSNP
rs1454989328 147 dbSNP
rs928768849 152 dbSNP
rs1372190082 157 dbSNP
rs998337709 158 dbSNP
rs1415335363 161 dbSNP
rs980231553 163 dbSNP
rs1376671357 164 dbSNP
rs1156373092 167 dbSNP
rs1418701108 180 dbSNP
rs184629783 191 dbSNP
rs1026952482 192 dbSNP
rs1421209245 201 dbSNP
rs1873921 207 dbSNP
rs1010829320 208 dbSNP
rs893700561 212 dbSNP
rs1187788892 213 dbSNP
rs1014773714 218 dbSNP
rs529748560 222 dbSNP
rs762877057 233 dbSNP
rs776033100 234 dbSNP
rs147816066 235 dbSNP
rs1046510338 236 dbSNP
rs540234790 237 dbSNP
rs773244109 239 dbSNP
rs570075399 241 dbSNP
rs1030554145 246 dbSNP
rs995941929 251 dbSNP
rs376906601 252 dbSNP
rs1194887820 265 dbSNP
rs1042784668 266 dbSNP
rs1241472643 274 dbSNP
rs374134317 283 dbSNP
rs973354443 287 dbSNP
rs1419985741 293 dbSNP
rs1292451592 308 dbSNP
rs80314841 327 dbSNP
rs908161833 331 dbSNP
rs571741324 348 dbSNP
rs1053387431 352 dbSNP
rs1319238381 357 dbSNP
rs1354843116 360 dbSNP
rs1381201268 362 dbSNP
rs1295629510 367 dbSNP
rs954940451 368 dbSNP
rs938911121 369 dbSNP
rs1385090671 372 dbSNP
rs1290219365 381 dbSNP
rs1238779706 385 dbSNP
rs1030905994 392 dbSNP
rs1259266191 398 dbSNP
rs558406443 400 dbSNP
rs1206476768 404 dbSNP
rs964092850 406 dbSNP
rs1017971024 412 dbSNP
rs1485040029 414 dbSNP
rs544872239 425 dbSNP
rs948838026 448 dbSNP
rs575947874 450 dbSNP
rs1361785823 451 dbSNP
rs974066185 452 dbSNP
rs1455171164 453 dbSNP
rs114028308 458 dbSNP
rs908509723 459 dbSNP
rs73752842 462 dbSNP
rs569687031 471 dbSNP
rs954746280 472 dbSNP
rs761765441 473 dbSNP
rs1305523716 477 dbSNP
rs1446447352 481 dbSNP
rs1337865076 484 dbSNP
rs1030171685 486 dbSNP
rs1207046769 487 dbSNP
rs554800494 494 dbSNP
rs1046617217 502 dbSNP
rs948181886 505 dbSNP
rs1487665338 506 dbSNP
rs996008447 508 dbSNP
rs895191665 511 dbSNP
rs867290927 512 dbSNP
rs1214147660 519 dbSNP
rs1483296472 519 dbSNP
rs1195103040 526 dbSNP
rs964481474 527 dbSNP
rs1179086951 531 dbSNP
rs1394701573 536 dbSNP
rs776006416 538 dbSNP
rs139732881 539 dbSNP
rs746621453 541 dbSNP
rs777283392 545 dbSNP
rs1175776015 548 dbSNP
rs1359765075 561 dbSNP
rs891487652 564 dbSNP
rs1296925914 566 dbSNP
rs1053163565 578 dbSNP
rs1447963910 582 dbSNP
rs112456014 600 dbSNP
rs1369244064 605 dbSNP
rs983702659 609 dbSNP
rs561424432 611 dbSNP
rs923465954 612 dbSNP
rs1297108085 628 dbSNP
rs1384714213 636 dbSNP
rs1249534451 638 dbSNP
rs1393352953 645 dbSNP
rs1481616322 652 dbSNP
rs1199203810 655 dbSNP
rs1252086094 658 dbSNP
rs1325629009 668 dbSNP
rs1044606177 673 dbSNP
rs948870154 674 dbSNP
rs920037290 675 dbSNP
rs1038430147 677 dbSNP
rs150640608 680 dbSNP
rs1397187985 684 dbSNP
rs75000878 687 dbSNP
rs548900040 688 dbSNP
rs989226815 690 dbSNP
rs865898568 694 dbSNP
rs1373710315 696 dbSNP
rs1195487862 700 dbSNP
rs1296903067 701 dbSNP
rs954690156 705 dbSNP
rs957725787 706 dbSNP
rs1030640427 708 dbSNP
rs999453804 709 dbSNP
rs906421250 719 dbSNP
rs1272506319 721 dbSNP
rs1332374049 725 dbSNP
rs1024824220 732 dbSNP
rs1247498030 735 dbSNP
rs1195088939 738 dbSNP
rs528645324 739 dbSNP
rs570258997 743 dbSNP
rs1011334790 746 dbSNP
rs12653824 753 dbSNP
rs141856003 777 dbSNP
rs114906896 778 dbSNP
rs1002947532 782 dbSNP
rs561020756 783 dbSNP
rs1166016444 784 dbSNP
rs1442662626 789 dbSNP
rs886450124 794 dbSNP
rs192086948 798 dbSNP
rs1344981115 799 dbSNP
rs1429528004 806 dbSNP
rs1327344543 815 dbSNP
rs1048152578 816 dbSNP
rs1341793720 841 dbSNP
rs1397893472 849 dbSNP
rs933605466 852 dbSNP
rs1169691981 860 dbSNP
rs923488404 865 dbSNP
rs540752525 866 dbSNP
rs907473258 868 dbSNP
rs778198850 880 dbSNP
rs943574313 901 dbSNP
rs1023624676 913 dbSNP
rs527403677 922 dbSNP
rs914736007 923 dbSNP
rs1240858480 932 dbSNP
rs564503543 936 dbSNP
rs773694972 937 dbSNP
rs116814397 947 dbSNP
rs978133152 948 dbSNP
rs552654318 955 dbSNP
rs970405318 958 dbSNP
rs1230960211 959 dbSNP
rs887183074 965 dbSNP
rs1419762625 970 dbSNP
rs1311820018 978 dbSNP
rs1353024394 983 dbSNP
rs1051127077 987 dbSNP
rs375577331 991 dbSNP
rs1372288421 994 dbSNP
rs1252634337 995 dbSNP
rs1221896164 1003 dbSNP
rs1198696011 1010 dbSNP
rs1025333247 1021 dbSNP
rs1210447107 1028 dbSNP
rs868084196 1030 dbSNP
rs1444225186 1033 dbSNP
rs1211398457 1038 dbSNP
rs933972452 1046 dbSNP
rs1468904628 1047 dbSNP
rs556229723 1051 dbSNP
rs1179380794 1052 dbSNP
rs1381778806 1053 dbSNP
rs921246972 1055 dbSNP
rs1172639615 1076 dbSNP
rs974677930 1077 dbSNP
rs1300008526 1078 dbSNP
rs959229918 1080 dbSNP
rs1280421095 1091 dbSNP
rs1415714384 1094 dbSNP
rs943229662 1109 dbSNP
rs1353906421 1113 dbSNP
rs542793293 1130 dbSNP
rs989977154 1135 dbSNP
rs1006264664 1136 dbSNP
rs1347182403 1137 dbSNP
rs5015266 1137 dbSNP
rs1278122418 1139 dbSNP
rs573783129 1139 dbSNP
rs1272908419 1141 dbSNP
rs1239107421 1146 dbSNP
rs1436647695 1146 dbSNP
rs200389210 1146 dbSNP
rs1468335845 1148 dbSNP
rs1353972660 1149 dbSNP
rs1441999723 1149 dbSNP
rs1192572768 1150 dbSNP
rs1375610654 1152 dbSNP
rs1324460202 1153 dbSNP
rs1478710153 1157 dbSNP
rs188231477 1157 dbSNP
rs901841106 1159 dbSNP
rs1336748877 1160 dbSNP
rs1269602863 1161 dbSNP
rs1400712172 1161 dbSNP
rs1439952313 1161 dbSNP
rs56364012 1161 dbSNP
rs756884039 1161 dbSNP
rs1331414825 1162 dbSNP
rs183291910 1163 dbSNP
rs199559656 1163 dbSNP
rs1413479143 1164 dbSNP
rs1374864594 1165 dbSNP
rs1174402702 1166 dbSNP
rs1199133489 1167 dbSNP
rs1436810172 1168 dbSNP
rs1172698438 1169 dbSNP
rs1491403785 1169 dbSNP
rs1162611083 1170 dbSNP
rs1392625078 1170 dbSNP
rs1491432381 1170 dbSNP
rs1406113902 1171 dbSNP
rs4031030 1171 dbSNP
rs920416290 1171 dbSNP
rs972215201 1172 dbSNP
rs981157098 1172 dbSNP
rs1470360045 1173 dbSNP
rs368193863 1173 dbSNP
rs55685616 1173 dbSNP
rs1234421273 1174 dbSNP
rs1267532803 1174 dbSNP
rs1357527038 1175 dbSNP
rs374225889 1175 dbSNP
rs56359121 1175 dbSNP
rs1185642456 1176 dbSNP
rs1485339470 1177 dbSNP
rs1487011779 1177 dbSNP
rs1195288296 1178 dbSNP
rs1263810035 1179 dbSNP
rs1458246650 1179 dbSNP
rs879297093 1179 dbSNP
rs1257601265 1180 dbSNP
rs1278576104 1181 dbSNP
rs754773771 1181 dbSNP
rs1212452757 1182 dbSNP
rs1218350063 1183 dbSNP
rs1351144696 1183 dbSNP
rs1485073283 1183 dbSNP
rs1491083226 1184 dbSNP
rs1258224365 1185 dbSNP
rs1424150135 1185 dbSNP
rs202033513 1185 dbSNP
rs753273105 1185 dbSNP
rs761799744 1185 dbSNP
rs1180889971 1187 dbSNP
rs1305088782 1187 dbSNP
rs1378692375 1187 dbSNP
rs1391177467 1187 dbSNP
rs763013410 1187 dbSNP
rs766768516 1187 dbSNP
rs1329651550 1188 dbSNP
rs1241810497 1189 dbSNP
rs1426724232 1189 dbSNP
rs775445500 1189 dbSNP
rs1309570184 1190 dbSNP
rs1230497653 1191 dbSNP
rs1283062552 1191 dbSNP
rs1224024936 1192 dbSNP
rs1195161612 1193 dbSNP
rs1483575531 1193 dbSNP
rs943568174 1195 dbSNP
rs1458941728 1196 dbSNP
rs566191304 1196 dbSNP
rs1351768204 1197 dbSNP
rs1431499398 1198 dbSNP
rs148504769 1198 dbSNP
rs759348451 1198 dbSNP
rs1331579637 1199 dbSNP
rs1402863021 1199 dbSNP
rs1448032370 1199 dbSNP
rs1384558633 1200 dbSNP
rs146398329 1200 dbSNP
rs1302677913 1201 dbSNP
rs201253317 1201 dbSNP
rs1226539343 1202 dbSNP
rs1256128250 1202 dbSNP
rs1281653549 1202 dbSNP
rs1319711574 1203 dbSNP
rs1231984543 1205 dbSNP
rs532659901 1207 dbSNP
rs1252608832 1208 dbSNP
rs1355456467 1208 dbSNP
rs200688328 1208 dbSNP
rs1193156992 1209 dbSNP
rs1487592109 1209 dbSNP
rs1491032932 1209 dbSNP
rs375959852 1209 dbSNP
rs868835700 1209 dbSNP
rs1219175041 1210 dbSNP
rs565404728 1210 dbSNP
rs923716552 1211 dbSNP
rs1224003250 1212 dbSNP
rs1383856214 1212 dbSNP
rs1266305873 1213 dbSNP
rs1485570648 1214 dbSNP
rs1313523633 1216 dbSNP
rs1187881801 1218 dbSNP
rs1478394687 1218 dbSNP
rs199992273 1218 dbSNP
rs1412011516 1219 dbSNP
rs200049677 1220 dbSNP
rs558948101 1220 dbSNP
rs1283561323 1222 dbSNP
rs1350170291 1222 dbSNP
rs1376663312 1222 dbSNP
rs1418557542 1222 dbSNP
rs201902531 1222 dbSNP
rs1416751276 1223 dbSNP
rs1229867757 1224 dbSNP
rs1313687961 1224 dbSNP
rs1214726112 1226 dbSNP
rs1353340272 1226 dbSNP
rs971482561 1227 dbSNP
rs1488671179 1228 dbSNP
rs970837255 1231 dbSNP
rs1182875826 1233 dbSNP
rs1438632126 1233 dbSNP
rs529798356 1233 dbSNP
rs537690410 1233 dbSNP
rs550459998 1233 dbSNP
rs1156485440 1234 dbSNP
rs1419824630 1235 dbSNP
rs1343528244 1236 dbSNP
rs1357413006 1237 dbSNP
rs1449944866 1240 dbSNP
rs917581232 1240 dbSNP
rs1238181040 1242 dbSNP
rs1022561033 1243 dbSNP
rs1218770772 1244 dbSNP
rs1354466247 1244 dbSNP
rs138165258 1244 dbSNP
rs375632324 1244 dbSNP
rs1176365976 1245 dbSNP
rs1401505712 1245 dbSNP
rs1171554122 1246 dbSNP
rs1439756274 1246 dbSNP
rs202005526 1246 dbSNP
rs991150113 1248 dbSNP
rs1176731719 1249 dbSNP
rs898716777 1251 dbSNP
rs1017091115 1253 dbSNP
rs116173408 1253 dbSNP
rs1444354259 1253 dbSNP
rs1491300248 1253 dbSNP
rs1316426599 1254 dbSNP
rs142647845 1254 dbSNP
rs1491229051 1254 dbSNP
rs760074216 1254 dbSNP
rs1200984099 1255 dbSNP
rs959242834 1257 dbSNP
rs1259580919 1258 dbSNP
rs1162614288 1259 dbSNP
rs1060881 1260 dbSNP
rs1418552104 1261 dbSNP
rs1051629911 1262 dbSNP
rs1200022072 1262 dbSNP
rs1244420476 1262 dbSNP
rs1400778000 1262 dbSNP
rs1422889420 1262 dbSNP
rs1478742231 1262 dbSNP
rs1404937403 1263 dbSNP
rs934068050 1268 dbSNP
rs1437344688 1269 dbSNP
rs899836045 1269 dbSNP
rs1474119056 1274 dbSNP
rs755131452 1276 dbSNP
rs1039694351 1280 dbSNP
rs1005980158 1282 dbSNP
rs950539149 1289 dbSNP
rs1279168745 1294 dbSNP
rs1356113991 1297 dbSNP
rs1208829162 1300 dbSNP
rs1287347948 1304 dbSNP
rs112324280 1308 dbSNP
rs990004837 1311 dbSNP
rs1270408292 1314 dbSNP
rs934474198 1317 dbSNP
rs1476767992 1323 dbSNP
rs924438685 1324 dbSNP
rs1373392618 1329 dbSNP
rs751697750 1332 dbSNP
rs192567143 1333 dbSNP
rs1235708947 1336 dbSNP
rs1359870796 1341 dbSNP
rs1269740637 1343 dbSNP
rs1431752045 1344 dbSNP
rs188038265 1347 dbSNP
rs567728535 1351 dbSNP
rs901849474 1352 dbSNP
rs1297581724 1355 dbSNP
rs201092377 1356 dbSNP
rs55910111 1366 dbSNP
rs1279418256 1367 dbSNP
rs1007835561 1373 dbSNP
rs1166927906 1381 dbSNP
rs76497847 1385 dbSNP
rs1054701993 1386 dbSNP
rs1004439593 1405 dbSNP
rs1186666670 1406 dbSNP
rs934837936 1411 dbSNP
rs1250804128 1423 dbSNP
rs1480042580 1433 dbSNP
rs1487041234 1437 dbSNP
rs903347285 1441 dbSNP
rs765198554 1442 dbSNP
rs1029792563 1444 dbSNP
rs1441623425 1448 dbSNP
rs1185236346 1455 dbSNP
rs751449050 1462 dbSNP
rs142218133 1463 dbSNP
rs1274199018 1474 dbSNP
rs1378507926 1483 dbSNP
rs1224344037 1486 dbSNP
rs899912087 1487 dbSNP
rs114873871 1498 dbSNP
rs1010896152 1500 dbSNP
rs990422837 1502 dbSNP
rs937942257 1503 dbSNP
rs776682539 1507 dbSNP
rs1452865852 1528 dbSNP
rs984671240 1529 dbSNP
rs1350837449 1532 dbSNP
rs950587391 1534 dbSNP
rs1241762109 1538 dbSNP
rs1026114631 1539 dbSNP
rs531246902 1540 dbSNP
rs368733898 1543 dbSNP
rs562781127 1545 dbSNP
rs1353898406 1559 dbSNP
rs1018037867 1562 dbSNP
rs1007595824 1563 dbSNP
rs915658868 1568 dbSNP
rs542529828 1572 dbSNP
rs7720183 1573 dbSNP
rs909529425 1576 dbSNP
rs1174861241 1580 dbSNP
rs1392754217 1582 dbSNP
rs1172554601 1600 dbSNP
rs1465481777 1602 dbSNP
rs573895392 1603 dbSNP
rs182203143 1606 dbSNP
rs1392780916 1609 dbSNP
rs1307010171 1611 dbSNP
rs1330022029 1611 dbSNP
rs1230921128 1614 dbSNP
rs1030279105 1617 dbSNP
rs1323961651 1621 dbSNP
rs1197840689 1622 dbSNP
rs540434456 1624 dbSNP
rs1459205380 1629 dbSNP
rs553353102 1631 dbSNP
rs949176797 1633 dbSNP
rs1178021143 1635 dbSNP
rs1266712513 1636 dbSNP
rs1431553911 1639 dbSNP
rs1201619043 1642 dbSNP
rs1430689994 1655 dbSNP
rs896207899 1657 dbSNP
rs1018977508 1658 dbSNP
rs964149330 1664 dbSNP
rs1232761975 1671 dbSNP
rs1389346659 1672 dbSNP
rs1054788835 1674 dbSNP
rs1285098526 1676 dbSNP
rs572571836 1681 dbSNP
rs559136641 1682 dbSNP
rs984681185 1686 dbSNP
rs1348953708 1691 dbSNP
rs190999623 1692 dbSNP
rs539021191 1696 dbSNP
rs552759085 1697 dbSNP
rs1211783212 1703 dbSNP
rs1269707688 1707 dbSNP
rs1389508414 1708 dbSNP
rs1477749685 1713 dbSNP
rs1192150461 1718 dbSNP
rs919102949 1719 dbSNP
rs556541630 1720 dbSNP
rs1429520546 1725 dbSNP
rs1298637838 1727 dbSNP
rs1170678431 1728 dbSNP
rs536507779 1731 dbSNP
rs1304361518 1733 dbSNP
rs966259725 1734 dbSNP
rs796606881 1735 dbSNP
rs1434921862 1741 dbSNP
rs1296309665 1755 dbSNP
rs868243129 1757 dbSNP
rs1318709494 1758 dbSNP
rs186198706 1759 dbSNP
rs999185140 1760 dbSNP
rs1156527272 1763 dbSNP
rs547537721 1765 dbSNP
rs201958770 1773 dbSNP
rs1215041975 1775 dbSNP
rs1178225872 1779 dbSNP
rs1486388444 1780 dbSNP
rs903091619 1783 dbSNP
rs1412080511 1787 dbSNP
rs1255486858 1799 dbSNP
rs1210306747 1807 dbSNP
rs1304829946 1826 dbSNP
rs1385280254 1830 dbSNP
rs1486107758 1832 dbSNP
rs1418616581 1839 dbSNP
rs1156759002 1847 dbSNP
rs534169139 1847 dbSNP
rs1046015137 1851 dbSNP
rs749591318 1863 dbSNP
rs1301989526 1868 dbSNP
rs1376737464 1880 dbSNP
rs1257929304 1881 dbSNP
rs778108946 1882 dbSNP
rs1316039245 1887 dbSNP
rs1353043773 1888 dbSNP
rs949868853 1899 dbSNP
rs1286949734 1900 dbSNP
rs1032975902 1903 dbSNP
rs770199982 1907 dbSNP
rs1210045681 1909 dbSNP
rs1236038391 1911 dbSNP
rs915716438 1916 dbSNP
rs1055487503 1918 dbSNP
rs1185028154 1924 dbSNP
rs967631536 1925 dbSNP
rs1307452936 1930 dbSNP
rs1024906693 1931 dbSNP
rs1409549056 1936 dbSNP
rs1401173070 1952 dbSNP
rs748577844 1953 dbSNP
rs1353532505 1958 dbSNP
rs1175318583 1963 dbSNP
rs894617013 1964 dbSNP
rs748800410 1968 dbSNP
rs1470859888 1971 dbSNP
rs1337617984 1977 dbSNP
rs867613942 1979 dbSNP
rs781740910 1980 dbSNP
rs754968720 1983 dbSNP
rs1048687497 1988 dbSNP
rs116312688 1991 dbSNP
rs1219113974 1992 dbSNP
rs1452625828 1994 dbSNP
rs922863891 2002 dbSNP
rs545635537 2003 dbSNP
rs919212111 2006 dbSNP
rs977356194 2008 dbSNP
rs964218625 2019 dbSNP
rs1473839770 2027 dbSNP
rs1040678120 2029 dbSNP
rs1257830121 2043 dbSNP
rs1456999735 2045 dbSNP
rs1179254114 2048 dbSNP
rs944596376 2052 dbSNP
rs910377337 2053 dbSNP
rs1416400950 2054 dbSNP
rs1423043323 2055 dbSNP
rs1481291694 2056 dbSNP
rs1176802396 2058 dbSNP
rs751681292 2060 dbSNP
rs1187891201 2063 dbSNP
rs957400973 2075 dbSNP
rs1018428331 2077 dbSNP
rs1435922341 2089 dbSNP
rs1273577593 2095 dbSNP
rs551090585 2096 dbSNP
rs989565428 2096 dbSNP
rs958073799 2110 dbSNP
rs925960309 2118 dbSNP
rs1224678842 2120 dbSNP
rs1031453116 2121 dbSNP
rs531457578 2122 dbSNP
rs977420331 2123 dbSNP
rs1258352364 2125 dbSNP
rs1316483201 2139 dbSNP
rs1193690372 2141 dbSNP
rs576527199 2142 dbSNP
rs903121564 2143 dbSNP
rs1220270344 2146 dbSNP
rs1024239183 2150 dbSNP
rs11552199 2151 dbSNP
rs1200087568 2154 dbSNP
rs1422603256 2158 dbSNP
rs1210414403 2164 dbSNP
rs1014916943 2166 dbSNP
rs1474326884 2178 dbSNP
rs1169859944 2179 dbSNP
rs1420576652 2180 dbSNP
rs1404994054 2183 dbSNP
rs894316829 2192 dbSNP
rs958910514 2196 dbSNP
rs1055520492 2199 dbSNP
rs1034442098 2204 dbSNP
rs548973269 2207 dbSNP
rs887500217 2208 dbSNP
rs1047195288 2210 dbSNP
rs1230145293 2217 dbSNP
rs1271562086 2223 dbSNP
rs1233831681 2226 dbSNP
rs1339575164 2228 dbSNP
rs1227396884 2231 dbSNP
rs773432707 2231 dbSNP
rs1288896412 2233 dbSNP
rs1048786569 2236 dbSNP
rs1407069385 2244 dbSNP
rs1223095073 2245 dbSNP
rs745868032 2245 dbSNP
rs758696270 2247 dbSNP
rs897483804 2254 dbSNP
rs183120012 2258 dbSNP
rs1242503317 2266 dbSNP
rs1472565029 2270 dbSNP
rs1161941103 2272 dbSNP
rs1040323238 2274 dbSNP
rs1425440181 2291 dbSNP
rs1292896921 2292 dbSNP
rs1158555359 2293 dbSNP
rs536247798 2301 dbSNP
rs944585273 2310 dbSNP
rs910387165 2311 dbSNP
rs1381299119 2317 dbSNP
rs560477848 2320 dbSNP
rs1340270784 2329 dbSNP
rs1446780023 2332 dbSNP
rs989638805 2335 dbSNP
rs573589818 2338 dbSNP
rs1050226995 2342 dbSNP
rs540420977 2343 dbSNP
rs936083533 2349 dbSNP
rs1362275226 2351 dbSNP
rs1031065808 2353 dbSNP
rs926055472 2358 dbSNP
rs1459110304 2359 dbSNP
rs977889503 2372 dbSNP
rs1392778584 2373 dbSNP
rs978526732 2389 dbSNP
rs967443340 2397 dbSNP
rs79391530 2398 dbSNP
rs1445314029 2404 dbSNP
rs1458876364 2405 dbSNP
rs1014134979 2407 dbSNP
rs190590887 2408 dbSNP
rs894390551 2409 dbSNP
rs1034186857 2410 dbSNP
rs769573970 2420 dbSNP
rs186542511 2422 dbSNP
rs984285119 2431 dbSNP
rs952866819 2435 dbSNP
rs1046826252 2447 dbSNP
rs1307832214 2456 dbSNP
rs1333507672 2458 dbSNP
rs1466921615 2469 dbSNP
rs1027447550 2470 dbSNP
rs1261289471 2483 dbSNP
rs993647504 2487 dbSNP
rs1344012058 2503 dbSNP
rs897496465 2509 dbSNP
rs879897332 2521 dbSNP
rs1264779257 2524 dbSNP
rs545141452 2529 dbSNP
rs536770509 2557 dbSNP
rs576493501 2565 dbSNP
rs1421001787 2567 dbSNP
rs889004907 2567 dbSNP
rs1183137283 2569 dbSNP
rs1377615246 2587 dbSNP
rs1479745033 2587 dbSNP
rs371431118 2588 dbSNP
rs1407324912 2598 dbSNP
rs1050320865 2610 dbSNP
rs1297290128 2611 dbSNP
rs935843830 2623 dbSNP
rs904353824 2628 dbSNP
rs199563632 2636 dbSNP
rs978204248 2636 dbSNP
rs1041839459 2640 dbSNP
rs1221629270 2641 dbSNP
rs1326528354 2647 dbSNP
rs1299304093 2656 dbSNP
rs946084549 2661 dbSNP
rs1218217386 2676 dbSNP
rs971186929 2686 dbSNP
rs917276263 2692 dbSNP
rs1196387092 2703 dbSNP
rs1325718308 2705 dbSNP
rs1489988424 2707 dbSNP
rs993209044 2730 dbSNP
rs990779327 2732 dbSNP
rs1477725362 2733 dbSNP
rs937330266 2736 dbSNP
rs958641151 2741 dbSNP
rs556241603 2750 dbSNP
rs1298197276 2758 dbSNP
rs1166688847 2760 dbSNP
rs536652862 2767 dbSNP
rs573991268 2768 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' acccgaaagaucagaGUCGAGa 5'
                         |||||| 
Target 5' --uugugucacgcuaCAGCUCa 3'
 		1 - 20
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000280285.5 | 3UTR | UUGUGUCACGCUACAGCUCAUGCUGGCUGGGUCCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
118 hsa-miR-3160-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066658 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT075318 SF3B3 splicing factor 3b subunit 3 2 4
MIRT077083 EIF1 eukaryotic translation initiation factor 1 2 2
MIRT100381 HSPA1B heat shock protein family A (Hsp70) member 1B 2 6
MIRT135259 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT184913 ZNF268 zinc finger protein 268 2 2
MIRT218862 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT446580 FPR2 formyl peptide receptor 2 2 2
MIRT448834 FGD4 FYVE, RhoGEF and PH domain containing 4 2 2
MIRT449455 RNF13 ring finger protein 13 2 2
MIRT452284 CARD8 caspase recruitment domain family member 8 2 2
MIRT452628 FAM162A family with sequence similarity 162 member A 2 2
MIRT453454 GLG1 golgi glycoprotein 1 2 2
MIRT454188 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454434 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454575 NT5DC3 5'-nucleotidase domain containing 3 2 2
MIRT455555 TRAF1 TNF receptor associated factor 1 2 6
MIRT455841 MPL MPL proto-oncogene, thrombopoietin receptor 2 6
MIRT455969 BCAS4 breast carcinoma amplified sequence 4 2 4
MIRT456805 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457320 DUSP19 dual specificity phosphatase 19 2 2
MIRT457366 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457684 ZNF587 zinc finger protein 587 2 2
MIRT458158 LYRM4 LYR motif containing 4 2 6
MIRT458641 SGPP2 sphingosine-1-phosphate phosphatase 2 2 2
MIRT459134 FADS6 fatty acid desaturase 6 2 2
MIRT459153 NARF nuclear prelamin A recognition factor 2 4
MIRT460460 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460974 STK17B serine/threonine kinase 17b 2 2
MIRT461439 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT461507 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 2 2
MIRT462490 GSR glutathione-disulfide reductase 2 2
MIRT462638 PHF5A PHD finger protein 5A 2 2
MIRT463279 ZFX zinc finger protein, X-linked 2 2
MIRT463360 ZFAND4 zinc finger AN1-type containing 4 2 2
MIRT465777 TMOD3 tropomodulin 3 2 2
MIRT466143 TMEM120B transmembrane protein 120B 2 2
MIRT468401 SETD3 SET domain containing 3 2 2
MIRT468998 RNPS1 RNA binding protein with serine rich domain 1 2 2
MIRT471574 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT472108 NME2 NME/NM23 nucleoside diphosphate kinase 2 2 2
MIRT472125 NME1-NME2 NME1-NME2 readthrough 2 2
MIRT473020 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT473083 MORN4 MORN repeat containing 4 2 2
MIRT475598 HMGB2 high mobility group box 2 2 4
MIRT475937 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476117 GPR157 G protein-coupled receptor 157 2 2
MIRT476406 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT478003 DNAL1 dynein axonemal light chain 1 2 2
MIRT487969 IQSEC2 IQ motif and Sec7 domain 2 2 2
MIRT489418 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491522 IL10RA interleukin 10 receptor subunit alpha 2 2
MIRT492673 PLEC plectin 2 2
MIRT493545 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT513085 USP9X ubiquitin specific peptidase 9, X-linked 2 2
MIRT514009 CECR2 CECR2, histone acetyl-lysine reader 2 4
MIRT516683 ZNF860 zinc finger protein 860 2 2
MIRT518392 ZNF250 zinc finger protein 250 2 2
MIRT522683 LUZP1 leucine zipper protein 1 2 6
MIRT524488 CEP97 centrosomal protein 97 2 2
MIRT527457 CLEC12B C-type lectin domain family 12 member B 2 2
MIRT527705 IL17REL interleukin 17 receptor E like 2 2
MIRT531647 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT532381 UMPS uridine monophosphate synthetase 2 2
MIRT532588 MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 2 2
MIRT533555 TPM4 tropomyosin 4 2 2
MIRT548371 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 4
MIRT550250 PVR poliovirus receptor 2 2
MIRT552555 ZFP36L2 ZFP36 ring finger protein like 2 2 4
MIRT554113 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT554131 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT561344 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT561638 RUNX3 runt related transcription factor 3 2 2
MIRT566497 PBX2P1 PBX homeobox 2 pseudogene 1 2 2
MIRT570583 OTUD7B OTU deubiquitinase 7B 2 2
MIRT572731 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT574041 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT575231 Fut1 fucosyltransferase 1 2 2
MIRT606811 BICD2 BICD cargo adaptor 2 2 2
MIRT621016 CLSTN3 calsyntenin 3 2 2
MIRT637852 PDCL3 phosducin like 3 2 2
MIRT640477 ZNF557 zinc finger protein 557 2 2
MIRT642827 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT643887 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT664874 PCNXL2 pecanex homolog 2 2 2
MIRT680528 PRIM2 DNA primase subunit 2 2 2
MIRT680648 KIAA1456 KIAA1456 2 2
MIRT680807 ZNF578 zinc finger protein 578 2 2
MIRT680921 STX2 syntaxin 2 2 2
MIRT681112 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT681147 INTS7 integrator complex subunit 7 2 2
MIRT681966 TFCP2 transcription factor CP2 2 2
MIRT684316 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT684906 GSG2 histone H3 associated protein kinase 2 2
MIRT685499 MED16 mediator complex subunit 16 2 2
MIRT685929 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686875 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688204 FNIP1 folliculin interacting protein 1 2 2
MIRT688791 CCNB1 cyclin B1 2 2
MIRT689227 RPS19 ribosomal protein S19 2 2
MIRT690470 ZNF33A zinc finger protein 33A 2 2
MIRT691982 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 2 2
MIRT694006 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694529 TRIM72 tripartite motif containing 72 2 2
MIRT695420 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT695784 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT697799 UBXN2A UBX domain protein 2A 2 2
MIRT698275 TMEM2 transmembrane protein 2 2 2
MIRT698317 TMEM136 transmembrane protein 136 2 2
MIRT699971 RREB1 ras responsive element binding protein 1 2 2
MIRT700717 PNO1 partner of NOB1 homolog 2 2
MIRT701721 MTMR12 myotubularin related protein 12 2 2
MIRT701879 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT702959 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT706178 ZNF716 zinc finger protein 716 2 2
MIRT706463 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT718154 TTC33 tetratricopeptide repeat domain 33 2 2
MIRT718711 ANKRD18A ankyrin repeat domain 18A 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3160-3p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3160-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-3160-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-3160-3p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-3160-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3160-3p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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