pre-miRNA Information
pre-miRNA hsa-mir-7107   
Genomic Coordinates chr12: 121444273 - 121444352
Description Homo sapiens miR-7107 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-7107-5p
Sequence 6| UCGGCCUGGGGAGGAGGAAGGG |27
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs782634189 2 dbSNP
rs782536354 3 dbSNP
rs1230027540 4 dbSNP
rs539127530 5 dbSNP
rs782765349 9 dbSNP
rs55671311 10 dbSNP
rs183760300 11 dbSNP
rs782805318 12 dbSNP
rs782108772 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol METTL21A   
Synonyms FAM119A, HCA557b, HSPA-KMT
Description methyltransferase like 21A
Transcript NM_001127395   
Other Transcripts NM_145280   
Expression
Putative miRNA Targets on METTL21A
3'UTR of METTL21A
(miRNA target sites are highlighted)
>METTL21A|NM_001127395|3'UTR
   1 TTGGCTATAATTTATAAGAATGTTGTCATTGAGTGTGTCACTTAAGGTCTTAGACTGCAAATCTAACCATATTTAATGAA
  81 ATGTCTTACTGTACAAAAAGTCTAAGCCAAAGGTTCTCAGGGGAGAAAGCACATGTGCAGTTTTAAAACAAAGCAGTGCT
 161 TTGTCCCATTGCTGTGATTTTTAGTCAGACTTTACTCAGTCTGAAATGCAATTAACATTAAAGGATTAAGTGTGAGATTT
 241 CGATTTATGCTATTTGTGTATCCCATACTCCTCCCTTTTAATAAACAGTTTCCACTGATGATATGAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gggaagGAGGAGGGGUCCGGCu 5'
                || :| |:||| |:| 
Target 5' gtcagaCT-TTACTCAGTCTGa 3'
184 - 204 103.00 -12.80
2
miRNA  3' gggaaggaggAGGGGUCCggcu 5'
                    |:|:||||    
Target 5' aagccaaaggTTCTCAGGggag 3'
104 - 125 92.00 -10.40
3
miRNA  3' gggAAGGAGGA----GGGGUCCGGCu 5'
             | :| |:|    :|::|| |:| 
Target 5' gtgTGTCACTTAAGGTCTTAGACTGc 3'
33 - 58 85.00 -9.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30531354 13 COSMIC
COSN30576549 38 COSMIC
COSN30496365 84 COSMIC
COSN30140656 117 COSMIC
COSN30533410 123 COSMIC
COSN1232445 204 COSMIC
COSN18717223 242 COSMIC
COSN26438689 282 COSMIC
COSN5495410 308 COSMIC
COSN20097756 573 COSMIC
COSN28377295 670 COSMIC
COSN16129982 815 COSMIC
COSN17183223 852 COSMIC
COSN20090712 986 COSMIC
COSN20967790 1881 COSMIC
COSN18009259 2189 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs757351208 3 dbSNP
rs751598986 4 dbSNP
rs1258470489 7 dbSNP
rs1213371918 10 dbSNP
rs764701504 16 dbSNP
rs1024583310 17 dbSNP
rs375883561 18 dbSNP
rs779696224 18 dbSNP
rs753166697 22 dbSNP
rs765519201 29 dbSNP
rs1462778954 30 dbSNP
rs1352794725 34 dbSNP
rs1333462681 35 dbSNP
rs759915037 36 dbSNP
rs543139683 49 dbSNP
rs1441842094 53 dbSNP
rs1303778683 55 dbSNP
rs1381848309 60 dbSNP
rs1243427147 62 dbSNP
rs1031301107 68 dbSNP
rs1000793142 74 dbSNP
rs1218388815 90 dbSNP
rs1394683522 93 dbSNP
rs1293159515 97 dbSNP
rs903667193 109 dbSNP
rs1319225382 113 dbSNP
rs886738815 119 dbSNP
rs1447900600 121 dbSNP
rs1259500416 125 dbSNP
rs577299882 129 dbSNP
rs1048068602 133 dbSNP
rs1203443122 136 dbSNP
rs1007636740 149 dbSNP
rs1484090333 153 dbSNP
rs1212340371 157 dbSNP
rs926864803 160 dbSNP
rs889229618 166 dbSNP
rs1172903381 168 dbSNP
rs1051766244 203 dbSNP
rs1417533687 206 dbSNP
rs1409572711 208 dbSNP
rs780120984 209 dbSNP
rs769782590 215 dbSNP
rs933349560 238 dbSNP
rs897831553 241 dbSNP
rs750731320 242 dbSNP
rs550512576 249 dbSNP
rs1312654652 264 dbSNP
rs942315308 269 dbSNP
rs1279512557 270 dbSNP
rs757613282 273 dbSNP
rs918112753 276 dbSNP
rs1278835513 288 dbSNP
rs751399274 288 dbSNP
rs2709417 291 dbSNP
rs1431236163 304 dbSNP
rs1032318470 310 dbSNP
rs979439132 312 dbSNP
rs947787300 313 dbSNP
rs1475097141 324 dbSNP
rs1191858734 350 dbSNP
rs534328117 353 dbSNP
rs991931143 355 dbSNP
rs953385873 364 dbSNP
rs571968513 366 dbSNP
rs555417194 380 dbSNP
rs535739376 382 dbSNP
rs1030685339 386 dbSNP
rs1345146426 388 dbSNP
rs979731448 393 dbSNP
rs569895305 395 dbSNP
rs996802198 397 dbSNP
rs900973700 416 dbSNP
rs1394651716 422 dbSNP
rs1302389126 448 dbSNP
rs1218547116 462 dbSNP
rs1281991699 469 dbSNP
rs1169352892 472 dbSNP
rs1446361017 488 dbSNP
rs1222390028 497 dbSNP
rs1019869852 498 dbSNP
rs549985842 504 dbSNP
rs1193284216 508 dbSNP
rs1381188905 531 dbSNP
rs1421245336 532 dbSNP
rs765946483 537 dbSNP
rs1441880008 538 dbSNP
rs375647863 538 dbSNP
rs539610242 538 dbSNP
rs571791877 544 dbSNP
rs1384795141 545 dbSNP
rs1186695763 547 dbSNP
rs889195084 550 dbSNP
rs995116096 551 dbSNP
rs1438223697 552 dbSNP
rs1324744232 559 dbSNP
rs1030796027 570 dbSNP
rs1475972949 573 dbSNP
rs190467441 575 dbSNP
rs1252761125 584 dbSNP
rs1349848154 586 dbSNP
rs201525600 587 dbSNP
rs200593695 588 dbSNP
rs1045281975 589 dbSNP
rs1467164019 589 dbSNP
rs398060988 589 dbSNP
rs57895626 589 dbSNP
rs768562083 589 dbSNP
rs771294185 589 dbSNP
rs2252982 590 dbSNP
rs1470231934 591 dbSNP
rs918051276 592 dbSNP
rs1473400509 595 dbSNP
rs1203957668 620 dbSNP
rs1305793397 627 dbSNP
rs1416364242 647 dbSNP
rs1036377567 650 dbSNP
rs566055882 651 dbSNP
rs112938344 656 dbSNP
rs888051968 657 dbSNP
rs145143490 661 dbSNP
rs1045202516 669 dbSNP
rs1326577060 681 dbSNP
rs1442751596 691 dbSNP
rs925342628 693 dbSNP
rs529520955 694 dbSNP
rs918095237 695 dbSNP
rs992295628 699 dbSNP
rs1297497529 700 dbSNP
rs58092287 705 dbSNP
rs1439421725 710 dbSNP
rs1443316531 711 dbSNP
rs1190064321 712 dbSNP
rs1255940279 716 dbSNP
rs1355750130 718 dbSNP
rs563572549 719 dbSNP
rs201773577 720 dbSNP
rs1463169665 721 dbSNP
rs923591687 727 dbSNP
rs921937374 733 dbSNP
rs1172168310 735 dbSNP
rs1395358432 737 dbSNP
rs1414767907 744 dbSNP
rs1455825937 747 dbSNP
rs979145738 754 dbSNP
rs1278897600 756 dbSNP
rs1328320299 758 dbSNP
rs186558381 762 dbSNP
rs1250910984 764 dbSNP
rs1479723281 767 dbSNP
rs1213461795 774 dbSNP
rs774527015 785 dbSNP
rs985380606 786 dbSNP
rs58995239 789 dbSNP
rs1029514253 790 dbSNP
rs965694143 793 dbSNP
rs1190417883 795 dbSNP
rs112142986 801 dbSNP
rs1019416436 802 dbSNP
rs1373450258 808 dbSNP
rs1236259338 843 dbSNP
rs1433994239 844 dbSNP
rs1348266013 846 dbSNP
rs190885366 852 dbSNP
rs1306260823 855 dbSNP
rs1298691216 866 dbSNP
rs1387079539 869 dbSNP
rs371022046 871 dbSNP
rs1295027731 872 dbSNP
rs1221972470 874 dbSNP
rs1236830132 874 dbSNP
rs1004440825 877 dbSNP
rs1374957579 881 dbSNP
rs1298267186 883 dbSNP
rs1217833109 886 dbSNP
rs1262956085 889 dbSNP
rs1485183218 891 dbSNP
rs1202854334 895 dbSNP
rs1260508426 905 dbSNP
rs571995487 908 dbSNP
rs1476766278 915 dbSNP
rs1413559152 916 dbSNP
rs1373273271 917 dbSNP
rs1392915005 922 dbSNP
rs951241609 923 dbSNP
rs2464982 925 dbSNP
rs1437028172 926 dbSNP
rs1396040089 928 dbSNP
rs1159105487 929 dbSNP
rs1288340836 930 dbSNP
rs1391590541 932 dbSNP
rs1443231243 940 dbSNP
rs1370546004 943 dbSNP
rs1241246995 949 dbSNP
rs1309694053 950 dbSNP
rs1315648468 953 dbSNP
rs1239026446 954 dbSNP
rs1158230940 959 dbSNP
rs1162886664 959 dbSNP
rs1177554371 959 dbSNP
rs1215046437 959 dbSNP
rs1234586657 959 dbSNP
rs1250692868 959 dbSNP
rs1252465293 959 dbSNP
rs1259597965 959 dbSNP
rs1300247361 959 dbSNP
rs1314003042 959 dbSNP
rs1333676703 959 dbSNP
rs1337602837 959 dbSNP
rs1371683284 959 dbSNP
rs1394025792 959 dbSNP
rs1417203357 959 dbSNP
rs1418511407 959 dbSNP
rs1447876304 959 dbSNP
rs1463024334 959 dbSNP
rs1467804769 959 dbSNP
rs1468507378 959 dbSNP
rs57522071 959 dbSNP
rs767632290 959 dbSNP
rs1204826587 960 dbSNP
rs1252729857 960 dbSNP
rs1479505763 961 dbSNP
rs1176420630 962 dbSNP
rs1258055710 963 dbSNP
rs1476186189 965 dbSNP
rs1185885762 968 dbSNP
rs1417311396 969 dbSNP
rs1410719515 970 dbSNP
rs1172752199 976 dbSNP
rs1417836071 984 dbSNP
rs1461749652 985 dbSNP
rs1171406142 986 dbSNP
rs1177853527 988 dbSNP
rs1290869377 989 dbSNP
rs1413524052 989 dbSNP
rs1354225341 996 dbSNP
rs1485360856 1003 dbSNP
rs112431566 1004 dbSNP
rs1266909963 1004 dbSNP
rs1280856298 1004 dbSNP
rs1305405156 1004 dbSNP
rs1208693175 1008 dbSNP
rs1256756633 1012 dbSNP
rs1018271364 1013 dbSNP
rs1188376517 1024 dbSNP
rs1417556768 1024 dbSNP
rs1428198587 1030 dbSNP
rs1213259419 1033 dbSNP
rs1208469683 1047 dbSNP
rs1377689563 1048 dbSNP
rs71429778 1051 dbSNP
rs1433277721 1064 dbSNP
rs1485898349 1073 dbSNP
rs1489667207 1098 dbSNP
rs71429777 1100 dbSNP
rs1430736707 1110 dbSNP
rs1274416406 1156 dbSNP
rs1359414073 1165 dbSNP
rs1259923205 1197 dbSNP
rs1303836742 1200 dbSNP
rs1349735402 1214 dbSNP
rs1213317546 1276 dbSNP
rs1318664905 1279 dbSNP
rs1307571538 1324 dbSNP
rs1232175770 1327 dbSNP
rs1447521991 1340 dbSNP
rs1218037446 1365 dbSNP
rs1240478881 1401 dbSNP
rs1353001228 1408 dbSNP
rs1294792559 1411 dbSNP
rs1415016083 1425 dbSNP
rs1485645861 1436 dbSNP
rs1403429593 1439 dbSNP
rs1288667349 1447 dbSNP
rs1397137992 1448 dbSNP
rs1451989622 1459 dbSNP
rs1347491439 1470 dbSNP
rs868202546 1499 dbSNP
rs1474949075 1513 dbSNP
rs1415725668 1520 dbSNP
rs1190415340 1539 dbSNP
rs1475666996 1544 dbSNP
rs1261221492 1552 dbSNP
rs1184593289 1562 dbSNP
rs1486696574 1564 dbSNP
rs1261295134 1569 dbSNP
rs868043328 1570 dbSNP
rs1332119309 1573 dbSNP
rs1274495802 1576 dbSNP
rs1233299677 1579 dbSNP
rs1325491828 1599 dbSNP
rs1292943227 1616 dbSNP
rs1372745973 1630 dbSNP
rs1380904190 1651 dbSNP
rs1274101451 1654 dbSNP
rs1351282115 1714 dbSNP
rs1225429867 1716 dbSNP
rs865967616 1723 dbSNP
rs1214412527 1724 dbSNP
rs1255047119 1770 dbSNP
rs1321853473 1777 dbSNP
rs1461372899 1792 dbSNP
rs1392445545 1809 dbSNP
rs1233868774 1817 dbSNP
rs868472128 1851 dbSNP
rs1157300180 1859 dbSNP
rs1407922692 1865 dbSNP
rs1456199620 1877 dbSNP
rs1458440613 1881 dbSNP
rs1396220443 1886 dbSNP
rs1438335084 1895 dbSNP
rs1322612435 1896 dbSNP
rs1336083333 1900 dbSNP
rs1444134248 1904 dbSNP
rs1277637561 1905 dbSNP
rs1349801906 1905 dbSNP
rs1233974024 1908 dbSNP
rs1275188241 1912 dbSNP
rs1372743010 1920 dbSNP
rs1439870163 1923 dbSNP
rs1232745284 1934 dbSNP
rs1188033402 1935 dbSNP
rs1475860581 1935 dbSNP
rs1419437762 1936 dbSNP
rs1191277495 1937 dbSNP
rs1459439022 1937 dbSNP
rs1430130637 1942 dbSNP
rs1322545479 1944 dbSNP
rs867685487 1945 dbSNP
rs865905337 1947 dbSNP
rs1365797531 1949 dbSNP
rs1326684022 1951 dbSNP
rs1349782070 1952 dbSNP
rs1415373686 1952 dbSNP
rs1460992838 1952 dbSNP
rs1366899747 1955 dbSNP
rs1244187647 1959 dbSNP
rs1270933152 1966 dbSNP
rs1341746593 1971 dbSNP
rs1467096913 1980 dbSNP
rs1254737959 2001 dbSNP
rs1213800154 2011 dbSNP
rs1338115438 2013 dbSNP
rs1213592461 2016 dbSNP
rs1249308352 2017 dbSNP
rs1229117360 2024 dbSNP
rs1309699294 2026 dbSNP
rs1298779209 2027 dbSNP
rs1440542643 2029 dbSNP
rs1369472512 2032 dbSNP
rs1328457302 2033 dbSNP
rs1387476259 2035 dbSNP
rs1395828782 2040 dbSNP
rs1166443000 2041 dbSNP
rs1463712323 2044 dbSNP
rs1390960883 2045 dbSNP
rs868808166 2051 dbSNP
rs1452293235 2057 dbSNP
rs866931815 2058 dbSNP
rs1199459024 2060 dbSNP
rs1436761050 2061 dbSNP
rs1247796941 2068 dbSNP
rs1197242828 2071 dbSNP
rs1480761761 2072 dbSNP
rs1279115500 2079 dbSNP
rs1369760949 2079 dbSNP
rs1234049395 2090 dbSNP
rs1346144217 2093 dbSNP
rs865870461 2099 dbSNP
rs868573409 2114 dbSNP
rs1373574590 2117 dbSNP
rs1319146724 2128 dbSNP
rs1328415396 2128 dbSNP
rs1335311293 2128 dbSNP
rs1225589109 2139 dbSNP
rs1326953699 2141 dbSNP
rs1297180017 2155 dbSNP
rs1393148829 2156 dbSNP
rs1236971641 2157 dbSNP
rs1371433129 2163 dbSNP
rs1312445982 2164 dbSNP
rs1483247102 2165 dbSNP
rs1199375491 2168 dbSNP
rs1432681032 2174 dbSNP
rs1377015832 2175 dbSNP
rs1448338776 2177 dbSNP
rs1186237768 2180 dbSNP
rs1173154952 2181 dbSNP
rs1469551582 2182 dbSNP
rs1361934948 2183 dbSNP
rs1183397955 2187 dbSNP
rs1472605661 2188 dbSNP
rs1256430994 2189 dbSNP
rs1208241458 2192 dbSNP
rs1393193171 2199 dbSNP
rs1484935811 2200 dbSNP
rs1281155295 2202 dbSNP
rs1201335924 2203 dbSNP
rs1350600541 2205 dbSNP
rs1278249631 2207 dbSNP
rs1241299034 2208 dbSNP
rs1320069789 2212 dbSNP
rs1351154878 2216 dbSNP
rs1292946716 2217 dbSNP
rs866692445 2220 dbSNP
rs1377102934 2221 dbSNP
rs1334581136 2222 dbSNP
rs1301769278 2223 dbSNP
rs1312101325 2225 dbSNP
rs1399828643 2226 dbSNP
rs1382726733 2227 dbSNP
rs1160202836 2234 dbSNP
rs1457349262 2237 dbSNP
rs1416520759 2238 dbSNP
rs1468696692 2239 dbSNP
rs1185429741 2240 dbSNP
rs1195257163 2241 dbSNP
rs1475992543 2244 dbSNP
rs1237629530 2248 dbSNP
rs1188722105 2249 dbSNP
rs1365475337 2249 dbSNP
rs1451633452 2250 dbSNP
rs1446731190 2255 dbSNP
rs1282823813 2256 dbSNP
rs1463257018 2256 dbSNP
rs1211089618 2257 dbSNP
rs1330000357 2258 dbSNP
rs1272609622 2259 dbSNP
rs1231468453 2264 dbSNP
rs1357609855 2265 dbSNP
rs1284952273 2266 dbSNP
rs1429829817 2268 dbSNP
rs1324439079 2269 dbSNP
rs1320286424 2270 dbSNP
rs1435713022 2274 dbSNP
rs1393570712 2275 dbSNP
rs1162182104 2276 dbSNP
rs1462524895 2278 dbSNP
rs1488000646 2279 dbSNP
rs866335194 2283 dbSNP
rs1166931805 2285 dbSNP
rs1475313529 2287 dbSNP
rs1240712655 2289 dbSNP
rs1191115709 2290 dbSNP
rs1471600553 2290 dbSNP
rs1465754740 2291 dbSNP
rs1252847272 2292 dbSNP
rs1211936093 2315 dbSNP
rs1323560761 2316 dbSNP
rs1418715808 2317 dbSNP
rs1476245049 2319 dbSNP
rs1290910773 2320 dbSNP
rs1214201245 2325 dbSNP
rs1162884844 2329 dbSNP
rs1349531129 2335 dbSNP
rs200081603 2335 dbSNP
rs1462757424 2337 dbSNP
rs1337273579 2342 dbSNP
rs1300338263 2344 dbSNP
rs1299565220 2346 dbSNP
rs1435463065 2347 dbSNP
rs1370204542 2348 dbSNP
rs1323757173 2352 dbSNP
rs1442523621 2353 dbSNP
rs1349919442 2360 dbSNP
rs1327846637 2361 dbSNP
rs1409807734 2364 dbSNP
rs1287126123 2365 dbSNP
rs1355500003 2366 dbSNP
rs1407842741 2372 dbSNP
rs1310048697 2374 dbSNP
rs1320809822 2375 dbSNP
rs1421125651 2377 dbSNP
rs1170882977 2382 dbSNP
rs1450433735 2383 dbSNP
rs1482014529 2383 dbSNP
rs1395064171 2392 dbSNP
rs1192273342 2393 dbSNP
rs1489546076 2397 dbSNP
rs1476195373 2401 dbSNP
rs1180199707 2402 dbSNP
rs868842256 2409 dbSNP
rs1429399895 2413 dbSNP
rs1203838820 2428 dbSNP
rs1436298594 2445 dbSNP
rs1429552581 2453 dbSNP
rs1276993982 2477 dbSNP
rs1228900497 2485 dbSNP
rs1346847973 2489 dbSNP
rs1301205206 2490 dbSNP
rs1220866376 2491 dbSNP
rs1367761777 2499 dbSNP
rs1300624847 2501 dbSNP
rs1278456907 2517 dbSNP
rs1439309920 2518 dbSNP
rs1372055419 2520 dbSNP
rs1227409675 2522 dbSNP
rs1280878188 2523 dbSNP
rs1308208131 2542 dbSNP
rs1430845937 2568 dbSNP
rs1375218417 2570 dbSNP
rs1237027652 2603 dbSNP
rs1486300510 2638 dbSNP
rs1172380586 2642 dbSNP
rs1435440905 2643 dbSNP
rs1188470467 2687 dbSNP
rs1246452056 2787 dbSNP
rs1449169831 2800 dbSNP
rs1426410373 2896 dbSNP
rs1397414132 2916 dbSNP
rs1413312123 2936 dbSNP
rs1176724229 2958 dbSNP
rs1468626461 2975 dbSNP
rs1173303710 2979 dbSNP
rs1358029969 3013 dbSNP
rs1254308956 3016 dbSNP
rs1206094701 3017 dbSNP
rs1322069249 3049 dbSNP
rs1362588369 3074 dbSNP
rs1485258640 3075 dbSNP
rs1310252893 3077 dbSNP
rs1303958281 3081 dbSNP
rs1323174183 3082 dbSNP
rs1244974771 3083 dbSNP
rs1259640080 3088 dbSNP
rs1463203843 3096 dbSNP
rs1210054545 3098 dbSNP
rs1349938499 3099 dbSNP
rs1461248081 3100 dbSNP
rs1182160302 3101 dbSNP
rs1233371156 3109 dbSNP
rs542181104 3114 dbSNP
rs576422187 3118 dbSNP
rs556469424 3119 dbSNP
rs539647702 3124 dbSNP
rs570619770 3126 dbSNP
rs1217448585 3152 dbSNP
rs201100027 3154 dbSNP
rs558009075 3174 dbSNP
rs535113144 3178 dbSNP
rs528802722 3181 dbSNP
rs1277903200 3186 dbSNP
rs1211902138 3196 dbSNP
rs1312703750 3200 dbSNP
rs1306151093 3203 dbSNP
rs1246414729 3204 dbSNP
rs1464657726 3224 dbSNP
rs62191484 3225 dbSNP
rs1221598644 3230 dbSNP
rs1351766073 3246 dbSNP
rs1191072676 3252 dbSNP
rs1255326848 3252 dbSNP
rs1409372055 3252 dbSNP
rs879717925 3252 dbSNP
rs1400714473 3253 dbSNP
rs1288665566 3254 dbSNP
rs180737398 3254 dbSNP
rs189932776 3259 dbSNP
rs1385975887 3260 dbSNP
rs1456425475 3262 dbSNP
rs1326300164 3268 dbSNP
rs565966637 3269 dbSNP
rs549341817 3270 dbSNP
rs529213356 3271 dbSNP
rs200741071 3272 dbSNP
rs199667866 3273 dbSNP
rs1201623045 3274 dbSNP
rs1332567892 3274 dbSNP
rs201271790 3274 dbSNP
rs1284823771 3275 dbSNP
rs1353120498 3278 dbSNP
rs1274120429 3286 dbSNP
rs1374049235 3288 dbSNP
rs1301467192 3290 dbSNP
rs1266366175 3301 dbSNP
rs997980744 3326 dbSNP
rs564700649 3329 dbSNP
rs1328708930 3330 dbSNP
rs1214510288 3332 dbSNP
rs1467867850 3335 dbSNP
rs1450175924 3337 dbSNP
rs1221301520 3348 dbSNP
rs1360275645 3354 dbSNP
rs1233963788 3364 dbSNP
rs897938009 3369 dbSNP
rs376712903 3385 dbSNP
rs527366553 3386 dbSNP
rs887787012 3404 dbSNP
rs1414267885 3405 dbSNP
rs141109231 3410 dbSNP
rs995250453 3412 dbSNP
rs1355011253 3420 dbSNP
rs1045251421 3431 dbSNP
rs1044712516 3432 dbSNP
rs1013812199 3439 dbSNP
rs1233991886 3446 dbSNP
rs1286106629 3447 dbSNP
rs1354595333 3448 dbSNP
rs541868526 3461 dbSNP
rs1274209162 3463 dbSNP
rs1260123363 3468 dbSNP
rs896742997 3471 dbSNP
rs1251761382 3472 dbSNP
rs1330675976 3484 dbSNP
rs1188056373 3486 dbSNP
rs2551950 3489 dbSNP
rs1232083405 3492 dbSNP
rs935477227 3498 dbSNP
rs1056664718 3506 dbSNP
rs116333731 3507 dbSNP
rs1043801210 3523 dbSNP
rs1314375283 3535 dbSNP
rs932057916 3538 dbSNP
rs1338903976 3539 dbSNP
rs1398211072 3540 dbSNP
rs923755615 3548 dbSNP
rs1043406554 3554 dbSNP
rs976503135 3559 dbSNP
rs1226670847 3560 dbSNP
rs946328797 3561 dbSNP
rs530401403 3562 dbSNP
rs1349326292 3567 dbSNP
rs966100268 3572 dbSNP
rs1355563275 3602 dbSNP
rs1257703143 3604 dbSNP
rs910891413 3610 dbSNP
rs1186336783 3622 dbSNP
rs546109462 3643 dbSNP
rs185282742 3648 dbSNP
rs1242350563 3650 dbSNP
rs1451025093 3666 dbSNP
rs540203891 3666 dbSNP
rs1389466233 3668 dbSNP
rs1435318874 3672 dbSNP
rs1433506648 3673 dbSNP
rs1391392595 3681 dbSNP
rs1400108471 3684 dbSNP
rs1395550661 3686 dbSNP
rs985349359 3688 dbSNP
rs533007510 3697 dbSNP
rs1491439286 3698 dbSNP
rs534837842 3710 dbSNP
rs1424246273 3711 dbSNP
rs564816692 3714 dbSNP
rs1236015327 3730 dbSNP
rs114846295 3732 dbSNP
rs151077304 3733 dbSNP
rs951209372 3762 dbSNP
rs758937615 3770 dbSNP
rs1184500384 3781 dbSNP
rs962435576 3784 dbSNP
rs1247229177 3788 dbSNP
rs969127158 3802 dbSNP
rs1023270057 3806 dbSNP
rs1248528870 3810 dbSNP
rs1176699303 3813 dbSNP
rs1212552184 3821 dbSNP
rs1459083320 3823 dbSNP
rs535457446 3824 dbSNP
rs1014976862 3825 dbSNP
rs896174878 3827 dbSNP
rs1054941 3855 dbSNP
rs1031665646 3856 dbSNP
rs999791592 3860 dbSNP
rs1006264798 3865 dbSNP
rs903986008 3869 dbSNP
rs1372117433 3871 dbSNP
rs1043938425 3875 dbSNP
rs952024589 3928 dbSNP
rs1299733187 3929 dbSNP
rs1331101799 3932 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gggaaGGAGGAGGGGUCCGGCu 5'
               || |:|:   |||||| 
Target 5' -----CCACUUUGGGAGGCCGa 3'
1 - 17
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000448823.2 | 3UTR | CCACUUUGGGAGGCCGAGGCGGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
144 hsa-miR-7107-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT060580 CCND1 cyclin D1 2 4
MIRT451035 ZNF610 zinc finger protein 610 2 2
MIRT485711 CASP16 caspase 16, pseudogene 2 8
MIRT488402 TDRKH tudor and KH domain containing 2 2
MIRT492084 TCF21 transcription factor 21 2 2
MIRT504213 VAV3 vav guanine nucleotide exchange factor 3 2 13
MIRT505723 SERTAD3 SERTA domain containing 3 2 4
MIRT509007 FBXO6 F-box protein 6 2 2
MIRT509843 FOS Fos proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT514761 RBM4B RNA binding motif protein 4B 2 2
MIRT515664 LRRC27 leucine rich repeat containing 27 2 2
MIRT516316 F8A2 coagulation factor VIII associated 2 2 2
MIRT516342 F8A3 coagulation factor VIII associated 3 2 2
MIRT517139 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT518746 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519299 MLH1 mutL homolog 1 2 2
MIRT521527 QSOX1 quiescin sulfhydryl oxidase 1 2 4
MIRT531756 TXK TXK tyrosine kinase 2 2
MIRT542208 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542235 FUT9 fucosyltransferase 9 2 2
MIRT542791 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT554378 SETD5 SET domain containing 5 2 2
MIRT569908 PCSK9 proprotein convertase subtilisin/kexin type 9 2 2
MIRT570222 SLC27A1 solute carrier family 27 member 1 2 2
MIRT570976 RGS19 regulator of G protein signaling 19 2 2
MIRT573046 SHMT1 serine hydroxymethyltransferase 1 2 2
MIRT574954 Vav3 vav 3 oncogene 2 8
MIRT609297 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT612990 GBX2 gastrulation brain homeobox 2 2 2
MIRT613851 SHB SH2 domain containing adaptor protein B 2 2
MIRT613935 POLR3A RNA polymerase III subunit A 2 2
MIRT614243 WDR53 WD repeat domain 53 2 4
MIRT615158 SPIB Spi-B transcription factor 2 2
MIRT616145 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT616389 C1orf87 chromosome 1 open reading frame 87 2 2
MIRT617737 ATCAY ATCAY, caytaxin 2 4
MIRT621449 TCN2 transcobalamin 2 2 2
MIRT625784 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT628556 MELK maternal embryonic leucine zipper kinase 2 2
MIRT632041 ZNF430 zinc finger protein 430 2 2
MIRT634937 GTF2H2C GTF2H2 family member C 2 4
MIRT637208 MEAF6 MYST/Esa1 associated factor 6 2 2
MIRT637610 LOH12CR1 BLOC-1 related complex subunit 5 2 2
MIRT637832 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT638107 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT638387 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT641689 SPCS1 signal peptidase complex subunit 1 2 2
MIRT642611 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT643850 LACTB lactamase beta 2 4
MIRT649575 PALD1 phosphatase domain containing, paladin 1 2 2
MIRT649860 WDR12 WD repeat domain 12 2 2
MIRT651026 ZNF699 zinc finger protein 699 2 2
MIRT652336 TMOD3 tropomodulin 3 2 4
MIRT653286 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 2 2
MIRT656292 METTL14 methyltransferase like 14 2 2
MIRT656458 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT659539 CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 2 2
MIRT661537 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT668042 GTPBP10 GTP binding protein 10 2 2
MIRT668147 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT668800 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT669818 STOML1 stomatin like 1 2 2
MIRT670490 DCUN1D2 defective in cullin neddylation 1 domain containing 2 2 2
MIRT670615 NPHP1 nephrocystin 1 2 2
MIRT670892 CYTIP cytohesin 1 interacting protein 2 2
MIRT670943 LIPG lipase G, endothelial type 2 2
MIRT671268 MTRNR2L5 MT-RNR2-like 5 2 2
MIRT671903 GBP4 guanylate binding protein 4 2 2
MIRT672239 ABHD15 abhydrolase domain containing 15 2 2
MIRT672326 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT673113 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT674412 GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 2 2
MIRT677718 IRF1 interferon regulatory factor 1 2 2
MIRT678585 PPP1R3B protein phosphatase 1 regulatory subunit 3B 2 2
MIRT678726 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT679338 ISG20L2 interferon stimulated exonuclease gene 20 like 2 2 2
MIRT679614 RRP36 ribosomal RNA processing 36 2 2
MIRT679695 SLC1A5 solute carrier family 1 member 5 2 4
MIRT679715 RPL24 ribosomal protein L24 2 2
MIRT680065 CD96 CD96 molecule 2 2
MIRT683379 ESR2 estrogen receptor 2 2 2
MIRT683683 MICA MHC class I polypeptide-related sequence A 2 2
MIRT683865 OCIAD1 OCIA domain containing 1 2 2
MIRT684073 TLR7 toll like receptor 7 2 2
MIRT684126 CEP104 centrosomal protein 104 2 2
MIRT684485 GPR137B G protein-coupled receptor 137B 2 2
MIRT684736 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT684778 MYO1F myosin IF 2 2
MIRT685028 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT685189 DCTN5 dynactin subunit 5 2 2
MIRT685307 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT685514 MSH3 mutS homolog 3 2 2
MIRT685702 BHMT2 betaine--homocysteine S-methyltransferase 2 2 2
MIRT685944 PTGIS prostaglandin I2 synthase 2 2
MIRT686311 VPS53 VPS53, GARP complex subunit 2 2
MIRT686686 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT687641 LRIF1 ligand dependent nuclear receptor interacting factor 1 2 2
MIRT687923 HOOK3 hook microtubule tethering protein 3 2 2
MIRT688117 GEMIN8 gem nuclear organelle associated protein 8 2 2
MIRT688460 DNAJB4 DnaJ heat shock protein family (Hsp40) member B4 2 2
MIRT688629 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT688823 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT689117 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT689166 ZNF665 zinc finger protein 665 2 2
MIRT690070 MBD1 methyl-CpG binding domain protein 1 2 2
MIRT690733 IRAK4 interleukin 1 receptor associated kinase 4 2 2
MIRT691324 KIAA1841 KIAA1841 2 2
MIRT691517 ZNF682 zinc finger protein 682 2 2
MIRT691607 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT692314 RFK riboflavin kinase 2 2
MIRT692376 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT692436 METTL8 methyltransferase like 8 2 2
MIRT692782 SYNPO2L synaptopodin 2 like 2 2
MIRT693136 THEM4 thioesterase superfamily member 4 2 2
MIRT693422 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT693871 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT694049 PRIM1 DNA primase subunit 1 2 2
MIRT694092 KIAA0930 KIAA0930 2 2
MIRT694190 ZNF347 zinc finger protein 347 2 2
MIRT695177 SLC25A33 solute carrier family 25 member 33 2 2
MIRT696180 GNB5 G protein subunit beta 5 2 2
MIRT697387 ZMAT3 zinc finger matrin-type 3 2 2
MIRT698924 SPEM1 spermatid maturation 1 2 2
MIRT699314 SLC35F5 solute carrier family 35 member F5 2 4
MIRT701106 PAPD5 poly(A) RNA polymerase D5, non-canonical 2 2
MIRT701575 MYPN myopalladin 2 2
MIRT701825 MRPL37 mitochondrial ribosomal protein L37 2 2
MIRT702047 METTL21A methyltransferase like 21A 2 2
MIRT703034 HAS2 hyaluronan synthase 2 2 4
MIRT704143 DNAL1 dynein axonemal light chain 1 2 2
MIRT704759 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT705079 C4orf29 abhydrolase domain containing 18 2 2
MIRT705346 ATP1B3 ATPase Na+/K+ transporting subunit beta 3 2 2
MIRT706104 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT709070 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT709534 ZBED1 zinc finger BED-type containing 1 2 2
MIRT712356 NAT14 N-acetyltransferase 14 (putative) 2 2
MIRT713713 PAOX polyamine oxidase 2 2
MIRT714304 ZNF454 zinc finger protein 454 2 2
MIRT714919 PPP1R12C protein phosphatase 1 regulatory subunit 12C 2 2
MIRT715792 TBL3 transducin beta like 3 2 2
MIRT717376 RBM41 RNA binding motif protein 41 2 2
MIRT719069 ACOX1 acyl-CoA oxidase 1 2 2
MIRT724548 HAUS2 HAUS augmin like complex subunit 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-7107-5p Docetaxel 148124 NSC628503 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-7107-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-7107-5p Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-7107-5p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (SW480, HCT-116)
hsa-miR-7107-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-7107-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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