pre-miRNA Information
pre-miRNA hsa-mir-4433a   
Genomic Coordinates chr2: 64340759 - 64340839
Description Homo sapiens miR-4433a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4433a-3p
Sequence 51| ACAGGAGUGGGGGUGGGACAU |71
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs751480515 9 dbSNP
rs557760377 15 dbSNP
rs1479580865 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LHX4   
Synonyms CPHD4
Description LIM homeobox 4
Transcript NM_033343   
Expression
Putative miRNA Targets on LHX4
3'UTR of LHX4
(miRNA target sites are highlighted)
>LHX4|NM_033343|3'UTR
   1 ACTTCTCTCCTCCCCACCCTACCTGCCCCCCTGGCTTGAGAGAATATCTTCAAGGATCAAAAGAGACTTGCCTTTTAAGG
  81 ATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAATGGAAGTCCTCCGCTGATTCCTAGAAGGCTGTGAGACCACAC
 161 TAGGGCATTGTTTCCCTGGGGAAGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCACAGGGGGTAATGGCCTAGAGCT
 241 CTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCTTTGGTAGCACAAGG
 321 TGACTGTGATAGGCCCCCTTGGCCTTTGGGAACTTTGCTCCAACTGGTGTGTCTCACACAATGCCTCCCAAAACACTGCT
 401 CTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGAGTAAAATAAAAGTGATTTCTGGACCATCAAAAAA
 481 AAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uacAGGGUGG----GG--GUGAGGAca 5'
             ||:||||    |:   ||||||  
Target 5' tgcTCTCACCAGAACTGAGACTCCTaa 3'
397 - 423 130.00 -15.50
2
miRNA  3' uaCAGGGUGGGGGUGAGGAca 5'
            ||||: | |: |:||||  
Target 5' aaGTCCTCCGCTGATTCCTag 3'
122 - 142 127.00 -17.90
3
miRNA  3' uacagggugggggUGAGGACa 5'
                       |:|:||| 
Target 5' taaaataaaagtgATTTCTGg 3'
448 - 468 108.00 -5.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
874817 9 ClinVar
293872 18 ClinVar
874818 18 ClinVar
293873 27 ClinVar
293874 29 ClinVar
293875 92 ClinVar
293876 98 ClinVar
293877 120 ClinVar
293878 131 ClinVar
875752 155 ClinVar
875753 222 ClinVar
876749 281 ClinVar
293879 287 ClinVar
293880 290 ClinVar
293881 446 ClinVar
876750 461 ClinVar
COSN31556058 16 COSMIC
COSN28558692 27 COSMIC
COSN26982397 32 COSMIC
COSN26982400 32 COSMIC
COSN30145583 37 COSMIC
COSN30714216 41 COSMIC
COSN30453235 64 COSMIC
COSN30454258 80 COSMIC
COSN31604193 90 COSMIC
COSN30149733 117 COSMIC
COSN30165118 131 COSMIC
COSN27822935 162 COSMIC
COSN1415721 218 COSMIC
COSN26699543 267 COSMIC
COSN1415722 359 COSMIC
COSN20219907 362 COSMIC
COSN8409045 621 COSMIC
COSN15024501 661 COSMIC
COSN8336631 708 COSMIC
COSN17472816 1191 COSMIC
COSN29342287 1209 COSMIC
COSN1415723 1542 COSMIC
COSN17715874 1796 COSMIC
COSN27283010 2266 COSMIC
COSN6430834 2738 COSMIC
COSN9367523 3228 COSMIC
COSN17268252 3299 COSMIC
COSN22433072 4084 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1440904685 7 dbSNP
rs1320121590 9 dbSNP
rs1211678501 11 dbSNP
rs116482990 18 dbSNP
rs1468744404 19 dbSNP
rs752621836 23 dbSNP
rs758429350 24 dbSNP
rs546149199 26 dbSNP
rs138054044 27 dbSNP
rs75471724 29 dbSNP
rs771166162 31 dbSNP
rs1192772938 32 dbSNP
rs745959693 32 dbSNP
rs769698383 35 dbSNP
rs775561854 43 dbSNP
rs751030263 45 dbSNP
rs763403197 45 dbSNP
rs1462276677 46 dbSNP
rs769183650 48 dbSNP
rs373806372 49 dbSNP
rs762142528 52 dbSNP
rs1002278732 54 dbSNP
rs752434127 59 dbSNP
rs1468565202 64 dbSNP
rs1241779667 70 dbSNP
rs779064460 72 dbSNP
rs544419836 73 dbSNP
rs557484323 84 dbSNP
rs577330480 85 dbSNP
rs555728017 92 dbSNP
rs1476681003 93 dbSNP
rs559812806 97 dbSNP
rs145063714 98 dbSNP
rs542243627 99 dbSNP
rs1421827488 101 dbSNP
rs935512394 106 dbSNP
rs1172840410 109 dbSNP
rs1053152174 110 dbSNP
rs1478217804 113 dbSNP
rs562421943 119 dbSNP
rs180725260 120 dbSNP
rs1167227803 128 dbSNP
rs59623342 131 dbSNP
rs985897168 132 dbSNP
rs905162542 134 dbSNP
rs996023794 150 dbSNP
rs747210761 155 dbSNP
rs951328511 156 dbSNP
rs1210655714 167 dbSNP
rs1362864179 169 dbSNP
rs966247344 171 dbSNP
rs372160683 176 dbSNP
rs1225794230 177 dbSNP
rs571097424 181 dbSNP
rs1019832415 190 dbSNP
rs965284536 195 dbSNP
rs1373918979 201 dbSNP
rs533562704 201 dbSNP
rs547140594 210 dbSNP
rs1270536936 212 dbSNP
rs796476390 218 dbSNP
rs1043776625 221 dbSNP
rs148288621 223 dbSNP
rs920959329 225 dbSNP
rs1207484271 226 dbSNP
rs1424221942 227 dbSNP
rs879238096 234 dbSNP
rs113216566 246 dbSNP
rs535856338 251 dbSNP
rs1449225598 259 dbSNP
rs1256406921 261 dbSNP
rs978958922 263 dbSNP
rs924378191 269 dbSNP
rs1281237254 270 dbSNP
rs1194431158 274 dbSNP
rs555445765 275 dbSNP
rs1339348623 284 dbSNP
rs1259237706 285 dbSNP
rs80203153 287 dbSNP
rs1449108390 288 dbSNP
rs918065001 288 dbSNP
rs74970014 290 dbSNP
rs1418775903 295 dbSNP
rs1409133088 307 dbSNP
rs1036136512 310 dbSNP
rs1456921966 313 dbSNP
rs1157025788 323 dbSNP
rs1459418363 328 dbSNP
rs1390994723 333 dbSNP
rs1402352025 340 dbSNP
rs1473611932 351 dbSNP
rs1230782461 353 dbSNP
rs1318939460 360 dbSNP
rs1180164323 361 dbSNP
rs1045327122 363 dbSNP
rs1457556466 370 dbSNP
rs1239329012 372 dbSNP
rs905215385 374 dbSNP
rs557624416 384 dbSNP
rs1333325016 387 dbSNP
rs1316614389 390 dbSNP
rs995516927 391 dbSNP
rs994707242 396 dbSNP
rs1277955228 398 dbSNP
rs1027775184 402 dbSNP
rs907448715 407 dbSNP
rs1333298017 413 dbSNP
rs1048990008 418 dbSNP
rs1438695295 424 dbSNP
rs1393633082 428 dbSNP
rs1164909401 429 dbSNP
rs1007605258 441 dbSNP
rs887206679 445 dbSNP
rs57069480 446 dbSNP
rs1439490086 447 dbSNP
rs533717296 448 dbSNP
rs966159990 458 dbSNP
rs780118212 460 dbSNP
rs988330056 461 dbSNP
rs1205242021 471 dbSNP
rs1467558994 480 dbSNP
rs1222432342 489 dbSNP
rs1278477848 489 dbSNP
rs781370335 490 dbSNP
rs747058518 492 dbSNP
rs968323299 495 dbSNP
rs996743732 500 dbSNP
rs770137478 518 dbSNP
rs776046764 524 dbSNP
rs1231761025 526 dbSNP
rs748861299 530 dbSNP
rs768120436 532 dbSNP
rs1342874368 541 dbSNP
rs1438023666 541 dbSNP
rs924235968 544 dbSNP
rs1365576127 545 dbSNP
rs553485180 550 dbSNP
rs1381748808 553 dbSNP
rs1160876063 558 dbSNP
rs918031805 561 dbSNP
rs1425122448 569 dbSNP
rs1192214535 571 dbSNP
rs1479055803 573 dbSNP
rs1240489269 582 dbSNP
rs1215978921 590 dbSNP
rs940096640 600 dbSNP
rs992957143 601 dbSNP
rs1311348418 602 dbSNP
rs1301895658 608 dbSNP
rs1220938576 618 dbSNP
rs1172085204 630 dbSNP
rs573620688 634 dbSNP
rs1269122489 636 dbSNP
rs949512307 644 dbSNP
rs1045379440 648 dbSNP
rs1362093308 649 dbSNP
rs930441787 651 dbSNP
rs926853696 652 dbSNP
rs1375893199 655 dbSNP
rs1358890159 658 dbSNP
rs562301427 661 dbSNP
rs1048392230 663 dbSNP
rs1286032024 664 dbSNP
rs1337186559 665 dbSNP
rs889004628 671 dbSNP
rs1193099895 673 dbSNP
rs1478159183 689 dbSNP
rs562302468 690 dbSNP
rs1185988922 715 dbSNP
rs60852985 721 dbSNP
rs1004329466 730 dbSNP
rs1041091769 731 dbSNP
rs1343491496 739 dbSNP
rs1211938196 743 dbSNP
rs1305747737 750 dbSNP
rs1282372561 772 dbSNP
rs756032349 777 dbSNP
rs761417585 787 dbSNP
rs901054684 791 dbSNP
rs1341762811 793 dbSNP
rs529483972 801 dbSNP
rs1379440526 807 dbSNP
rs572639772 824 dbSNP
rs1467879149 835 dbSNP
rs1203486841 841 dbSNP
rs1353288968 842 dbSNP
rs1170539447 843 dbSNP
rs1425789942 859 dbSNP
rs564218424 859 dbSNP
rs968210156 862 dbSNP
rs1252867621 865 dbSNP
rs186031944 866 dbSNP
rs1183405121 878 dbSNP
rs544485774 880 dbSNP
rs1237500353 884 dbSNP
rs1199131296 885 dbSNP
rs772828418 887 dbSNP
rs955882997 889 dbSNP
rs1376058587 894 dbSNP
rs1270798160 896 dbSNP
rs760506914 902 dbSNP
rs916998807 906 dbSNP
rs992201734 908 dbSNP
rs1452476794 912 dbSNP
rs141416491 918 dbSNP
rs980943484 924 dbSNP
rs189750912 925 dbSNP
rs1395648555 927 dbSNP
rs1428811561 934 dbSNP
rs1403050688 936 dbSNP
rs1324026681 944 dbSNP
rs770847842 948 dbSNP
rs984766769 962 dbSNP
rs1167101772 963 dbSNP
rs1417097062 964 dbSNP
rs930494200 966 dbSNP
rs1179016944 972 dbSNP
rs1459067896 978 dbSNP
rs1398107598 991 dbSNP
rs1251034749 994 dbSNP
rs1208747024 995 dbSNP
rs1488497222 1013 dbSNP
rs1266846098 1016 dbSNP
rs181406384 1017 dbSNP
rs889059857 1019 dbSNP
rs943266728 1020 dbSNP
rs16855661 1021 dbSNP
rs867935039 1025 dbSNP
rs1241304043 1027 dbSNP
rs1041146716 1045 dbSNP
rs1379796151 1046 dbSNP
rs1322104414 1057 dbSNP
rs1368206216 1063 dbSNP
rs1391470584 1068 dbSNP
rs1237099055 1069 dbSNP
rs1418174920 1074 dbSNP
rs1304752075 1079 dbSNP
rs1342103863 1080 dbSNP
rs901274276 1083 dbSNP
rs1159080128 1087 dbSNP
rs1226572217 1090 dbSNP
rs1441262280 1091 dbSNP
rs1393226690 1095 dbSNP
rs1009196972 1096 dbSNP
rs1020723824 1096 dbSNP
rs901505150 1096 dbSNP
rs1253452274 1104 dbSNP
rs903576982 1105 dbSNP
rs1487788267 1106 dbSNP
rs1286229765 1108 dbSNP
rs1340315414 1118 dbSNP
rs1238959209 1119 dbSNP
rs1209522124 1125 dbSNP
rs1265321953 1142 dbSNP
rs1001064814 1144 dbSNP
rs1273596359 1151 dbSNP
rs1194363461 1154 dbSNP
rs764219495 1157 dbSNP
rs1303550718 1159 dbSNP
rs552119222 1162 dbSNP
rs959684811 1172 dbSNP
rs1168059086 1183 dbSNP
rs1298986769 1183 dbSNP
rs1421290009 1184 dbSNP
rs904328196 1185 dbSNP
rs1374643876 1194 dbSNP
rs1041275192 1209 dbSNP
rs1462157000 1211 dbSNP
rs1466545036 1212 dbSNP
rs1031986408 1216 dbSNP
rs1190432421 1224 dbSNP
rs150837893 1229 dbSNP
rs891498123 1240 dbSNP
rs549370365 1243 dbSNP
rs1477188226 1250 dbSNP
rs1195323796 1254 dbSNP
rs1013919201 1259 dbSNP
rs569199188 1263 dbSNP
rs1025143576 1267 dbSNP
rs1442400133 1270 dbSNP
rs1258234540 1271 dbSNP
rs1339850290 1275 dbSNP
rs961364966 1275 dbSNP
rs1279090429 1277 dbSNP
rs969796815 1279 dbSNP
rs1365018095 1283 dbSNP
rs979823907 1285 dbSNP
rs185837214 1286 dbSNP
rs1396348549 1290 dbSNP
rs1404309935 1294 dbSNP
rs952974143 1297 dbSNP
rs984429893 1298 dbSNP
rs1464661879 1306 dbSNP
rs1423790704 1309 dbSNP
rs1308489851 1311 dbSNP
rs984672297 1312 dbSNP
rs1471629730 1316 dbSNP
rs910371055 1328 dbSNP
rs1244557086 1330 dbSNP
rs943341574 1339 dbSNP
rs908780131 1341 dbSNP
rs1258877158 1343 dbSNP
rs1197234039 1344 dbSNP
rs138323938 1344 dbSNP
rs976725899 1345 dbSNP
rs144135277 1351 dbSNP
rs533755168 1352 dbSNP
rs1049784924 1367 dbSNP
rs1283779065 1367 dbSNP
rs1214332326 1368 dbSNP
rs1267665783 1371 dbSNP
rs904378207 1372 dbSNP
rs781629421 1375 dbSNP
rs1400907962 1384 dbSNP
rs528142859 1392 dbSNP
rs1412657253 1393 dbSNP
rs1163411746 1394 dbSNP
rs370226839 1396 dbSNP
rs1184763750 1398 dbSNP
rs746272291 1399 dbSNP
rs553523962 1409 dbSNP
rs1053075166 1418 dbSNP
rs573688451 1432 dbSNP
rs1042052918 1434 dbSNP
rs1449874564 1437 dbSNP
rs891713991 1452 dbSNP
rs536002407 1465 dbSNP
rs1023995278 1466 dbSNP
rs905498279 1469 dbSNP
rs1358732966 1470 dbSNP
rs546424215 1483 dbSNP
rs1462694597 1493 dbSNP
rs1027814740 1495 dbSNP
rs952944397 1507 dbSNP
rs984704796 1512 dbSNP
rs11450923 1515 dbSNP
rs397797382 1516 dbSNP
rs113737939 1517 dbSNP
rs895305262 1520 dbSNP
rs1452227120 1521 dbSNP
rs1358197415 1523 dbSNP
rs1015724619 1531 dbSNP
rs1439432265 1532 dbSNP
rs1381480567 1537 dbSNP
rs1179407925 1543 dbSNP
rs961625708 1543 dbSNP
rs1013719728 1544 dbSNP
rs1025192372 1557 dbSNP
rs1222359459 1559 dbSNP
rs1490916810 1565 dbSNP
rs1284088996 1572 dbSNP
rs190692673 1578 dbSNP
rs780463630 1579 dbSNP
rs954025046 1582 dbSNP
rs77775666 1585 dbSNP
rs796921914 1587 dbSNP
rs926020706 1590 dbSNP
rs369707025 1592 dbSNP
rs1026932615 1605 dbSNP
rs1337991357 1617 dbSNP
rs952863172 1632 dbSNP
rs1218074659 1633 dbSNP
rs115351245 1635 dbSNP
rs1361642777 1636 dbSNP
rs147293717 1649 dbSNP
rs749769562 1653 dbSNP
rs1199596963 1663 dbSNP
rs1425055878 1669 dbSNP
rs1191871326 1670 dbSNP
rs1481435709 1674 dbSNP
rs1255221890 1677 dbSNP
rs868744058 1684 dbSNP
rs1193144222 1686 dbSNP
rs116792859 1687 dbSNP
rs1243697150 1704 dbSNP
rs1207714390 1706 dbSNP
rs1311579935 1723 dbSNP
rs1188273964 1729 dbSNP
rs1279177043 1735 dbSNP
rs201537415 1738 dbSNP
rs879644294 1743 dbSNP
rs1224826982 1745 dbSNP
rs1410810792 1756 dbSNP
rs975885814 1766 dbSNP
rs140862 1767 dbSNP
rs55705194 1767 dbSNP
rs199511689 1768 dbSNP
rs200349443 1771 dbSNP
rs139984588 1773 dbSNP
rs148463688 1774 dbSNP
rs147864191 1775 dbSNP
rs1045663521 1789 dbSNP
rs905567025 1796 dbSNP
rs1001194044 1797 dbSNP
rs1415596887 1805 dbSNP
rs1478292474 1807 dbSNP
rs578242383 1809 dbSNP
rs887527653 1810 dbSNP
rs377546564 1812 dbSNP
rs540830669 1813 dbSNP
rs865840340 1815 dbSNP
rs1456386864 1818 dbSNP
rs773786124 1838 dbSNP
rs557214263 1839 dbSNP
rs1029865232 1841 dbSNP
rs1233546732 1844 dbSNP
rs954076556 1846 dbSNP
rs1486508038 1847 dbSNP
rs1378825217 1864 dbSNP
rs1337786094 1870 dbSNP
rs1211362104 1871 dbSNP
rs1046528781 1882 dbSNP
rs1398693130 1883 dbSNP
rs1330818760 1886 dbSNP
rs182904877 1889 dbSNP
rs1479456689 1893 dbSNP
rs1162878036 1894 dbSNP
rs771680563 1900 dbSNP
rs78618355 1902 dbSNP
rs994373161 1906 dbSNP
rs1026983649 1909 dbSNP
rs952826256 1910 dbSNP
rs1433093882 1922 dbSNP
rs760428516 1924 dbSNP
rs113823524 1929 dbSNP
rs1263326243 1930 dbSNP
rs988882255 1932 dbSNP
rs1321943496 1935 dbSNP
rs2764451 1938 dbSNP
rs1248590411 1940 dbSNP
rs558085840 1944 dbSNP
rs949861405 1946 dbSNP
rs1045713927 1960 dbSNP
rs1307819252 1961 dbSNP
rs927204121 1962 dbSNP
rs937236235 1965 dbSNP
rs2764452 1967 dbSNP
rs1392040020 1978 dbSNP
rs1398804722 1984 dbSNP
rs1291857405 1991 dbSNP
rs551328183 1994 dbSNP
rs1457634428 1995 dbSNP
rs1350664608 2008 dbSNP
rs1165266064 2011 dbSNP
rs978004312 2035 dbSNP
rs1379622002 2038 dbSNP
rs925188807 2042 dbSNP
rs1298805542 2043 dbSNP
rs936346278 2045 dbSNP
rs887423762 2052 dbSNP
rs1488629093 2055 dbSNP
rs990474924 2056 dbSNP
rs1005071541 2060 dbSNP
rs1036097093 2071 dbSNP
rs1285740212 2076 dbSNP
rs916337175 2077 dbSNP
rs571230599 2078 dbSNP
rs1299351304 2081 dbSNP
rs1440039018 2083 dbSNP
rs533791618 2089 dbSNP
rs1301099252 2093 dbSNP
rs897366294 2100 dbSNP
rs1346422515 2101 dbSNP
rs1349981630 2112 dbSNP
rs949152610 2113 dbSNP
rs1158925173 2115 dbSNP
rs1234668473 2119 dbSNP
rs1455318437 2122 dbSNP
rs998298817 2127 dbSNP
rs759505291 2129 dbSNP
rs1174766617 2132 dbSNP
rs1305392878 2135 dbSNP
rs1270597225 2136 dbSNP
rs1190977984 2158 dbSNP
rs1029749303 2160 dbSNP
rs1487757104 2161 dbSNP
rs1206245669 2167 dbSNP
rs954298194 2168 dbSNP
rs1254730706 2172 dbSNP
rs1232630917 2183 dbSNP
rs1007120380 2184 dbSNP
rs1285255248 2185 dbSNP
rs534289227 2186 dbSNP
rs771052370 2186 dbSNP
rs1318781413 2191 dbSNP
rs1255375631 2210 dbSNP
rs1383650732 2214 dbSNP
rs1400015082 2220 dbSNP
rs1171861238 2225 dbSNP
rs1469878158 2227 dbSNP
rs994111865 2228 dbSNP
rs547278988 2234 dbSNP
rs1048636384 2238 dbSNP
rs1194385265 2240 dbSNP
rs1337508956 2241 dbSNP
rs567394906 2247 dbSNP
rs536425046 2248 dbSNP
rs71630259 2254 dbSNP
rs1018257180 2256 dbSNP
rs200797803 2256 dbSNP
rs371104904 2256 dbSNP
rs1020372202 2257 dbSNP
rs879277139 2258 dbSNP
rs149261601 2259 dbSNP
rs5779057 2259 dbSNP
rs66735108 2260 dbSNP
rs878961563 2260 dbSNP
rs966540360 2263 dbSNP
rs981274526 2264 dbSNP
rs1367153508 2265 dbSNP
rs888470172 2266 dbSNP
rs1438733953 2268 dbSNP
rs867798153 2270 dbSNP
rs1328010882 2271 dbSNP
rs1445814657 2275 dbSNP
rs1245452455 2286 dbSNP
rs186109491 2286 dbSNP
rs1032690504 2293 dbSNP
rs1273988324 2297 dbSNP
rs200587956 2300 dbSNP
rs4058059 2300 dbSNP
rs57728752 2300 dbSNP
rs1354472903 2309 dbSNP
rs1283433967 2322 dbSNP
rs990918054 2323 dbSNP
rs1384948131 2326 dbSNP
rs1359658566 2330 dbSNP
rs1306910124 2335 dbSNP
rs538657500 2337 dbSNP
rs1216145106 2345 dbSNP
rs937267582 2347 dbSNP
rs192015272 2351 dbSNP
rs984710083 2353 dbSNP
rs908892767 2361 dbSNP
rs981830793 2364 dbSNP
rs1211200671 2372 dbSNP
rs80321654 2376 dbSNP
rs1425642685 2383 dbSNP
rs866786137 2386 dbSNP
rs751630990 2388 dbSNP
rs1193157968 2392 dbSNP
rs901610983 2395 dbSNP
rs563635775 2399 dbSNP
rs1240687197 2403 dbSNP
rs1048532916 2404 dbSNP
rs1476570392 2407 dbSNP
rs1450108646 2408 dbSNP
rs1187486267 2413 dbSNP
rs933034434 2415 dbSNP
rs1222959865 2422 dbSNP
rs1051224858 2425 dbSNP
rs757343785 2427 dbSNP
rs1198838941 2428 dbSNP
rs578252880 2430 dbSNP
rs1433608782 2436 dbSNP
rs1460133094 2444 dbSNP
rs182706541 2450 dbSNP
rs942953444 2484 dbSNP
rs111343222 2493 dbSNP
rs1461870145 2504 dbSNP
rs1438954621 2505 dbSNP
rs117654741 2517 dbSNP
rs1157225347 2520 dbSNP
rs1400690292 2535 dbSNP
rs893161392 2537 dbSNP
rs1010245284 2538 dbSNP
rs371472641 2541 dbSNP
rs201557317 2546 dbSNP
rs6680361 2548 dbSNP
rs1270555164 2554 dbSNP
rs1490901632 2562 dbSNP
rs749255795 2568 dbSNP
rs971488054 2574 dbSNP
rs1020393191 2576 dbSNP
rs549309861 2577 dbSNP
rs903244043 2579 dbSNP
rs1286206452 2582 dbSNP
rs1231132528 2587 dbSNP
rs1343599033 2592 dbSNP
rs981494145 2595 dbSNP
rs1225037098 2596 dbSNP
rs1337919056 2603 dbSNP
rs1296763478 2606 dbSNP
rs1334962890 2610 dbSNP
rs1430411965 2611 dbSNP
rs1204068937 2634 dbSNP
rs577878948 2635 dbSNP
rs1346312729 2645 dbSNP
rs1282701624 2651 dbSNP
rs1413258292 2653 dbSNP
rs1428770425 2658 dbSNP
rs1177206780 2661 dbSNP
rs566034608 2666 dbSNP
rs1449240998 2668 dbSNP
rs750624027 2674 dbSNP
rs1034210720 2675 dbSNP
rs1185743009 2689 dbSNP
rs1032161294 2696 dbSNP
rs756482351 2697 dbSNP
rs985148849 2698 dbSNP
rs1474338642 2699 dbSNP
rs1190388860 2700 dbSNP
rs1263262570 2704 dbSNP
rs1418891022 2705 dbSNP
rs1315714835 2710 dbSNP
rs1294327913 2713 dbSNP
rs780429242 2723 dbSNP
rs1363171023 2731 dbSNP
rs1272287832 2733 dbSNP
rs6704010 2738 dbSNP
rs1156906276 2743 dbSNP
rs940571593 2748 dbSNP
rs970376901 2751 dbSNP
rs755424000 2753 dbSNP
rs1169930619 2754 dbSNP
rs981716052 2766 dbSNP
rs971709148 2773 dbSNP
rs1421475635 2780 dbSNP
rs918355070 2782 dbSNP
rs1443985930 2785 dbSNP
rs529130617 2787 dbSNP
rs922918753 2787 dbSNP
rs933085316 2791 dbSNP
rs564105781 2792 dbSNP
rs1314287248 2794 dbSNP
rs528116868 2805 dbSNP
rs889975173 2813 dbSNP
rs1275615166 2836 dbSNP
rs1244174034 2843 dbSNP
rs1382735585 2844 dbSNP
rs1316259946 2852 dbSNP
rs747724211 2853 dbSNP
rs1454659049 2857 dbSNP
rs187694944 2859 dbSNP
rs1355720085 2863 dbSNP
rs140935054 2864 dbSNP
rs545006399 2874 dbSNP
rs1039962788 2875 dbSNP
rs1356472834 2877 dbSNP
rs922820449 2877 dbSNP
rs1054998257 2880 dbSNP
rs374658124 2884 dbSNP
rs893389948 2886 dbSNP
rs1437748588 2892 dbSNP
rs903294549 2894 dbSNP
rs1010467831 2901 dbSNP
rs1177254184 2903 dbSNP
rs1020308361 2905 dbSNP
rs771580944 2907 dbSNP
rs1258423468 2908 dbSNP
rs1292939501 2909 dbSNP
rs1359091507 2909 dbSNP
rs1002980346 2913 dbSNP
rs1315622889 2917 dbSNP
rs1306445926 2922 dbSNP
rs1391987506 2924 dbSNP
rs1034434118 2925 dbSNP
rs546661405 2925 dbSNP
rs1365662835 2928 dbSNP
rs577612944 2934 dbSNP
rs1404554066 2947 dbSNP
rs1366036407 2972 dbSNP
rs1159220311 2976 dbSNP
rs1023567778 2984 dbSNP
rs1377876206 2993 dbSNP
rs1394437325 2997 dbSNP
rs777340599 2998 dbSNP
rs1159237783 3003 dbSNP
rs1175289556 3013 dbSNP
rs1003187117 3019 dbSNP
rs1016473193 3021 dbSNP
rs145086828 3022 dbSNP
rs368031683 3025 dbSNP
rs1225153446 3034 dbSNP
rs778874982 3035 dbSNP
rs879929142 3044 dbSNP
rs981978558 3046 dbSNP
rs951168506 3048 dbSNP
rs1337062169 3049 dbSNP
rs1281450950 3053 dbSNP
rs954360240 3054 dbSNP
rs1223178553 3069 dbSNP
rs1346369009 3075 dbSNP
rs985881566 3085 dbSNP
rs1380275053 3086 dbSNP
rs964255761 3099 dbSNP
rs1289315602 3101 dbSNP
rs567536356 3104 dbSNP
rs1455268094 3106 dbSNP
rs1426674815 3107 dbSNP
rs1175045857 3108 dbSNP
rs910309689 3111 dbSNP
rs1480587471 3112 dbSNP
rs1430909727 3114 dbSNP
rs1303257216 3124 dbSNP
rs1346362975 3126 dbSNP
rs936378764 3131 dbSNP
rs1206307873 3138 dbSNP
rs1261454890 3138 dbSNP
rs1236859841 3139 dbSNP
rs1487119321 3160 dbSNP
rs1261398897 3162 dbSNP
rs1203066067 3171 dbSNP
rs1054647185 3175 dbSNP
rs1224982011 3176 dbSNP
rs914694776 3176 dbSNP
rs1325696015 3178 dbSNP
rs1300621730 3187 dbSNP
rs1296016758 3189 dbSNP
rs1383893389 3189 dbSNP
rs1338964652 3198 dbSNP
rs529860664 3198 dbSNP
rs1041971484 3200 dbSNP
rs1252718609 3204 dbSNP
rs1469829224 3205 dbSNP
rs922871202 3218 dbSNP
rs1438425988 3223 dbSNP
rs1165852529 3224 dbSNP
rs1474875029 3227 dbSNP
rs934215902 3239 dbSNP
rs1194323177 3242 dbSNP
rs192891529 3244 dbSNP
rs1241796627 3245 dbSNP
rs1183071894 3248 dbSNP
rs1002864438 3250 dbSNP
rs924601583 3252 dbSNP
rs796879260 3256 dbSNP
rs1265064347 3268 dbSNP
rs1194359222 3271 dbSNP
rs1251721210 3279 dbSNP
rs1056168680 3280 dbSNP
rs1195253918 3285 dbSNP
rs1229271129 3285 dbSNP
rs1378042331 3288 dbSNP
rs935963760 3292 dbSNP
rs1165756217 3293 dbSNP
rs1453270183 3293 dbSNP
rs1326246155 3294 dbSNP
rs878889625 3294 dbSNP
rs1054555075 3298 dbSNP
rs11407332 3299 dbSNP
rs1239324575 3299 dbSNP
rs199610642 3299 dbSNP
rs202017094 3299 dbSNP
rs34583869 3300 dbSNP
rs894524113 3300 dbSNP
rs1398215062 3301 dbSNP
rs1012100799 3302 dbSNP
rs1044859976 3302 dbSNP
rs1003408244 3303 dbSNP
rs1335991297 3304 dbSNP
rs1330409753 3305 dbSNP
rs531531999 3307 dbSNP
rs77873709 3309 dbSNP
rs869237883 3309 dbSNP
rs1163300543 3311 dbSNP
rs1324644106 3312 dbSNP
rs1369418138 3313 dbSNP
rs1416525180 3315 dbSNP
rs1156927265 3325 dbSNP
rs1025476022 3327 dbSNP
rs1443823524 3332 dbSNP
rs894564551 3335 dbSNP
rs1326248450 3342 dbSNP
rs1489912082 3345 dbSNP
rs1267980027 3348 dbSNP
rs1222890771 3354 dbSNP
rs1453290766 3371 dbSNP
rs1159676220 3372 dbSNP
rs1225735669 3375 dbSNP
rs1222723024 3385 dbSNP
rs1280778144 3401 dbSNP
rs529012258 3401 dbSNP
rs1340339015 3402 dbSNP
rs1221344088 3405 dbSNP
rs1213074029 3410 dbSNP
rs758935048 3412 dbSNP
rs1467068949 3414 dbSNP
rs1352127747 3419 dbSNP
rs1006695596 3424 dbSNP
rs1016114129 3434 dbSNP
rs1268012113 3436 dbSNP
rs1408857718 3436 dbSNP
rs200798110 3438 dbSNP
rs975635155 3444 dbSNP
rs1199890452 3450 dbSNP
rs1029826374 3460 dbSNP
rs1240133782 3464 dbSNP
rs1215061032 3478 dbSNP
rs1190781997 3480 dbSNP
rs1447476937 3482 dbSNP
rs1269523386 3488 dbSNP
rs1201176689 3496 dbSNP
rs1322435598 3501 dbSNP
rs1283451652 3502 dbSNP
rs993400149 3509 dbSNP
rs1268757929 3511 dbSNP
rs977675500 3511 dbSNP
rs1430704515 3515 dbSNP
rs1346259770 3516 dbSNP
rs538695571 3521 dbSNP
rs1468239561 3525 dbSNP
rs1030203211 3530 dbSNP
rs558679076 3533 dbSNP
rs143952197 3534 dbSNP
rs1417173827 3538 dbSNP
rs1185687899 3539 dbSNP
rs1463444282 3540 dbSNP
rs916022484 3541 dbSNP
rs1181219185 3542 dbSNP
rs948802929 3547 dbSNP
rs534581126 3565 dbSNP
rs1263203366 3577 dbSNP
rs1211849838 3579 dbSNP
rs910186157 3590 dbSNP
rs1271353933 3592 dbSNP
rs957824816 3606 dbSNP
rs989620307 3607 dbSNP
rs551630759 3610 dbSNP
rs1298191314 3612 dbSNP
rs1451085899 3614 dbSNP
rs914767830 3615 dbSNP
rs182835564 3618 dbSNP
rs770660651 3620 dbSNP
rs113080940 3621 dbSNP
rs1046979422 3622 dbSNP
rs1042023606 3630 dbSNP
rs1352927556 3635 dbSNP
rs1005241098 3637 dbSNP
rs1232953264 3639 dbSNP
rs1016996914 3640 dbSNP
rs899614172 3646 dbSNP
rs115677629 3652 dbSNP
rs1265901503 3654 dbSNP
rs1479473012 3655 dbSNP
rs938877867 3655 dbSNP
rs1485507937 3660 dbSNP
rs1029376629 3661 dbSNP
rs955534921 3661 dbSNP
rs977559471 3662 dbSNP
rs187183197 3665 dbSNP
rs1244477055 3669 dbSNP
rs1359316263 3674 dbSNP
rs371997581 3681 dbSNP
rs148649612 3682 dbSNP
rs1186827966 3684 dbSNP
rs1415249887 3688 dbSNP
rs781349198 3689 dbSNP
rs1297763772 3690 dbSNP
rs1443187740 3691 dbSNP
rs1006336078 3699 dbSNP
rs576139202 3707 dbSNP
rs1038174834 3710 dbSNP
rs1301041859 3711 dbSNP
rs897702966 3711 dbSNP
rs1385745761 3715 dbSNP
rs771892014 3716 dbSNP
rs1166300340 3721 dbSNP
rs993282466 3724 dbSNP
rs981499642 3736 dbSNP
rs1164877782 3737 dbSNP
rs1254474011 3738 dbSNP
rs928694238 3750 dbSNP
rs1490337929 3754 dbSNP
rs1266478878 3759 dbSNP
rs571350200 3760 dbSNP
rs1290976677 3762 dbSNP
rs1315260372 3762 dbSNP
rs11316143 3764 dbSNP
rs397982132 3764 dbSNP
rs1352507483 3765 dbSNP
rs373624414 3765 dbSNP
rs376138371 3766 dbSNP
rs368725355 3767 dbSNP
rs1281179227 3768 dbSNP
rs1030082070 3769 dbSNP
rs1391381247 3774 dbSNP
rs1295284296 3776 dbSNP
rs890390806 3784 dbSNP
rs1344135784 3802 dbSNP
rs1357620308 3810 dbSNP
rs1159171742 3812 dbSNP
rs1228900735 3812 dbSNP
rs1473378985 3813 dbSNP
rs1426717685 3814 dbSNP
rs1197716004 3819 dbSNP
rs1480279628 3820 dbSNP
rs1038076670 3823 dbSNP
rs1268476057 3823 dbSNP
rs1485161193 3826 dbSNP
rs544755398 3831 dbSNP
rs746558196 3833 dbSNP
rs10913958 3834 dbSNP
rs1331491256 3844 dbSNP
rs375586157 3844 dbSNP
rs1029433778 3849 dbSNP
rs1223123713 3850 dbSNP
rs1331536779 3851 dbSNP
rs1303101020 3854 dbSNP
rs1380511552 3855 dbSNP
rs1017298024 3860 dbSNP
rs111824982 3878 dbSNP
rs527714129 3880 dbSNP
rs999050348 3890 dbSNP
rs547031008 3895 dbSNP
rs957679670 3897 dbSNP
rs989282670 3898 dbSNP
rs1012240550 3903 dbSNP
rs1023178463 3903 dbSNP
rs1427292802 3904 dbSNP
rs1020705944 3905 dbSNP
rs966414113 3908 dbSNP
rs970476373 3916 dbSNP
rs981383833 3917 dbSNP
rs776500405 3928 dbSNP
rs1466358216 3933 dbSNP
rs1261334756 3935 dbSNP
rs928746437 3937 dbSNP
rs759558723 3952 dbSNP
rs977590813 3955 dbSNP
rs1345954396 3957 dbSNP
rs1257570117 3958 dbSNP
rs1224910761 3963 dbSNP
rs950788628 3967 dbSNP
rs1298169661 3969 dbSNP
rs982611927 3981 dbSNP
rs908367537 3987 dbSNP
rs928767390 4002 dbSNP
rs1236847630 4003 dbSNP
rs1287850297 4010 dbSNP
rs541382340 4011 dbSNP
rs1396298520 4012 dbSNP
rs1488469760 4013 dbSNP
rs1209915803 4017 dbSNP
rs1403854300 4018 dbSNP
rs115317153 4020 dbSNP
rs1486450828 4021 dbSNP
rs1181934093 4022 dbSNP
rs775559220 4023 dbSNP
rs1169858472 4025 dbSNP
rs1249266362 4026 dbSNP
rs1417820521 4029 dbSNP
rs1241417757 4030 dbSNP
rs921164947 4031 dbSNP
rs1161867040 4032 dbSNP
rs775934814 4037 dbSNP
rs1258453707 4038 dbSNP
rs377174838 4046 dbSNP
rs1193874216 4047 dbSNP
rs1338574753 4050 dbSNP
rs1275087289 4053 dbSNP
rs942024801 4056 dbSNP
rs1050733609 4074 dbSNP
rs1357163953 4077 dbSNP
rs1313766073 4078 dbSNP
rs191992606 4081 dbSNP
rs897921999 4082 dbSNP
rs762319819 4083 dbSNP
rs1390455182 4085 dbSNP
rs929368749 4097 dbSNP
rs1297656195 4098 dbSNP
rs1370373989 4098 dbSNP
rs1308991525 4103 dbSNP
rs1432190637 4104 dbSNP
rs1383881890 4105 dbSNP
rs76866993 4108 dbSNP
rs1473135647 4109 dbSNP
rs890272778 4120 dbSNP
rs1370258746 4123 dbSNP
rs1180016303 4126 dbSNP
rs1482835180 4128 dbSNP
rs1311301360 4131 dbSNP
rs1354340816 4135 dbSNP
rs1007498020 4138 dbSNP
rs1017933660 4147 dbSNP
rs893503918 4151 dbSNP
rs893297413 4160 dbSNP
rs1011716496 4176 dbSNP
rs569907749 4177 dbSNP
rs1237938401 4180 dbSNP
rs1313575381 4195 dbSNP
rs184581233 4196 dbSNP
rs569076091 4200 dbSNP
rs1023657401 4208 dbSNP
rs1289402133 4209 dbSNP
rs970265804 4210 dbSNP
rs1210435644 4211 dbSNP
rs200653054 4214 dbSNP
rs1479345275 4217 dbSNP
rs1406458494 4218 dbSNP
rs1393022164 4220 dbSNP
rs1156872477 4221 dbSNP
rs1010993817 4224 dbSNP
rs748684408 4228 dbSNP
rs1178447516 4229 dbSNP
rs552331693 4232 dbSNP
rs767609726 4233 dbSNP
rs1245907112 4239 dbSNP
rs151152109 4240 dbSNP
rs1453228506 4242 dbSNP
rs1281548415 4243 dbSNP
rs1329427541 4243 dbSNP
rs983943528 4243 dbSNP
rs909263120 4244 dbSNP
rs962877289 4244 dbSNP
rs973911262 4245 dbSNP
rs1274600937 4246 dbSNP
rs750630722 4248 dbSNP
rs534340076 4249 dbSNP
rs1397321136 4252 dbSNP
rs1316353881 4254 dbSNP
rs189344538 4256 dbSNP
rs1250279816 4258 dbSNP
rs11397772 4260 dbSNP
rs145377634 4260 dbSNP
rs1478983752 4260 dbSNP
rs397762436 4260 dbSNP
rs76641730 4260 dbSNP
rs932545319 4260 dbSNP
rs1240212356 4263 dbSNP
rs193125634 4264 dbSNP
rs960467313 4271 dbSNP
rs1352997258 4275 dbSNP
rs1249343243 4276 dbSNP
rs991795374 4277 dbSNP
rs916140905 4278 dbSNP
rs1053288408 4279 dbSNP
rs140382495 4281 dbSNP
rs947564063 4295 dbSNP
rs1268990422 4296 dbSNP
rs1044556703 4297 dbSNP
rs1300945422 4298 dbSNP
rs1366072441 4304 dbSNP
rs536912615 4309 dbSNP
rs1322613356 4324 dbSNP
rs1369415220 4324 dbSNP
rs1176525309 4325 dbSNP
rs533964903 4325 dbSNP
rs761219484 4325 dbSNP
rs919230773 4334 dbSNP
rs929420939 4337 dbSNP
rs555364688 4340 dbSNP
rs144160869 4342 dbSNP
rs776203987 4360 dbSNP
rs1249404534 4365 dbSNP
rs1199981500 4368 dbSNP
rs755332163 4369 dbSNP
rs538830460 4370 dbSNP
rs1212405730 4374 dbSNP
rs886448564 4383 dbSNP
rs184398297 4384 dbSNP
rs1004854642 4395 dbSNP
rs1248995830 4397 dbSNP
rs1038829715 4399 dbSNP
rs1228372650 4400 dbSNP
rs1343433362 4405 dbSNP
rs893714708 4406 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uaCAGGGUGGGG-GUGAGGACa 5'
            | |: ::|:|  ||||||| 
Target 5' caGGCUGGUCUCGAACUCCUGa 3'
13 - 34
2
miRNA  3' uacagggugggGGUGAGGACa 5'
                     |||| :: | 
Target 5' ---------ugCCACGUUGGc 3'
1 - 12
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000263726.2 | 3UTR | UGCCACGUUGGCCAGGCUGGUCUCGAACUCCUGACCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1013106
Method / RBP HITS-CLIP  / AGO
Cell line / Condition HS27a / HS27a-replicate-2
Location of target site ENST00000263726.2 | 3UTR | UGCCACGUUGGCCAGGCUGGUCUCGAACUCCUGACCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 24038734 / GSE41272
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
256 hsa-miR-4433a-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT088097 SEPT2 septin 2 2 2
MIRT143134 MGRN1 mahogunin ring finger 1 2 2
MIRT153912 NCOA3 nuclear receptor coactivator 3 2 2
MIRT154894 GNAS GNAS complex locus 2 4
MIRT200996 ZNF805 zinc finger protein 805 2 2
MIRT215729 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT235593 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT263250 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT317951 CDC5L cell division cycle 5 like 2 4
MIRT325572 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT354739 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 2 2
MIRT444552 UBE2D3 ubiquitin conjugating enzyme E2 D3 2 4
MIRT446978 SUSD5 sushi domain containing 5 2 2
MIRT451036 ZNF610 zinc finger protein 610 2 2
MIRT451596 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT452025 NLRP6 NLR family pyrin domain containing 6 2 2
MIRT452594 CA6 carbonic anhydrase 6 2 2
MIRT452768 TCEA3 transcription elongation factor A3 2 4
MIRT452959 ZNF844 zinc finger protein 844 2 2
MIRT453191 ACSF2 acyl-CoA synthetase family member 2 2 2
MIRT453382 RHD Rh blood group D antigen 2 2
MIRT453685 CEBPD CCAAT/enhancer binding protein delta 2 2
MIRT455272 DDX39B DExD-box helicase 39B 2 8
MIRT455346 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT456494 SERAC1 serine active site containing 1 2 2
MIRT456585 NID1 nidogen 1 2 2
MIRT456888 DDA1 DET1 and DDB1 associated 1 2 2
MIRT457123 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT457852 ZNF324B zinc finger protein 324B 2 2
MIRT457987 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT459278 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 2
MIRT459625 SLC25A33 solute carrier family 25 member 33 2 2
MIRT459715 SGK494 uncharacterized serine/threonine-protein kinase SgK494 2 2
MIRT460057 RPL22L1 ribosomal protein L22 like 1 2 2
MIRT460182 UNK unkempt family zinc finger 2 6
MIRT460288 PDE11A phosphodiesterase 11A 2 2
MIRT460841 EGF epidermal growth factor 2 4
MIRT460860 TBC1D19 TBC1 domain family member 19 2 2
MIRT461519 EMC7 ER membrane protein complex subunit 7 2 2
MIRT461729 SLC27A1 solute carrier family 27 member 1 2 4
MIRT461821 SNAP23 synaptosome associated protein 23 2 2
MIRT462066 CCDC77 coiled-coil domain containing 77 2 4
MIRT462084 MSANTD2 Myb/SANT DNA binding domain containing 2 2 2
MIRT462508 MTFMT mitochondrial methionyl-tRNA formyltransferase 2 10
MIRT464239 VCP valosin containing protein 2 2
MIRT465316 TRAF5 TNF receptor associated factor 5 2 2
MIRT466549 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467128 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 8
MIRT468091 SHCBP1 SHC binding and spindle associated 1 2 2
MIRT469630 RAD21 RAD21 cohesin complex component 2 6
MIRT471097 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472704 MYBL1 MYB proto-oncogene like 1 2 2
MIRT472830 MTMR10 myotubularin related protein 10 2 2
MIRT472872 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT472895 MTDH metadherin 2 2
MIRT473728 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT473859 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT474047 LONRF1 LON peptidase N-terminal domain and ring finger 1 2 2
MIRT474297 LAMC1 laminin subunit gamma 1 2 2
MIRT474658 KLF13 Kruppel like factor 13 2 2
MIRT475234 IKZF3 IKAROS family zinc finger 3 2 2
MIRT475500 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT475742 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT475793 HDGF heparin binding growth factor 2 2
MIRT477254 ERGIC2 ERGIC and golgi 2 2 2
MIRT478228 DDX52 DExD-box helicase 52 2 2
MIRT478393 DCTN5 dynactin subunit 5 2 2
MIRT478754 CS citrate synthase 2 2
MIRT478827 CRKL CRK like proto-oncogene, adaptor protein 2 4
MIRT480234 C9orf41 carnosine N-methyltransferase 1 2 2
MIRT480597 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT484121 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT484689 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT486331 C11orf54 chromosome 11 open reading frame 54 2 4
MIRT488599 FAM3C family with sequence similarity 3 member C 2 8
MIRT488833 MRRF mitochondrial ribosome recycling factor 2 2
MIRT492523 RAB15 RAB15, member RAS oncogene family 2 4
MIRT493632 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT500026 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501075 SMAD7 SMAD family member 7 2 8
MIRT503094 BTG2 BTG anti-proliferation factor 2 2 4
MIRT503336 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT505465 STMN1 stathmin 1 2 4
MIRT505726 SERTAD3 SERTA domain containing 3 2 4
MIRT509333 MS4A4A membrane spanning 4-domains A4A 2 2
MIRT509978 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 4
MIRT513068 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT513446 EMP1 epithelial membrane protein 1 2 6
MIRT513736 PSD3 pleckstrin and Sec7 domain containing 3 2 4
MIRT513996 CENPQ centromere protein Q 2 4
MIRT516538 MIXL1 Mix paired-like homeobox 2 2
MIRT517606 SAV1 salvador family WW domain containing protein 1 2 2
MIRT518064 CEP89 centrosomal protein 89 2 2
MIRT518119 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT518325 WDR92 WD repeat domain 92 2 2
MIRT519048 ABCB11 ATP binding cassette subfamily B member 11 2 2
MIRT520972 SPPL2A signal peptide peptidase like 2A 2 4
MIRT521359 RPL35A ribosomal protein L35a 2 2
MIRT523359 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT523801 FAM63A MINDY lysine 48 deubiquitinase 1 2 2
MIRT524622 C7orf73 short transmembrane mitochondrial protein 1 2 2
MIRT525550 PHB2 prohibitin 2 2 4
MIRT529709 ZBTB49 zinc finger and BTB domain containing 49 2 2
MIRT531605 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT532387 UMPS uridine monophosphate synthetase 2 2
MIRT534468 SCD stearoyl-CoA desaturase 2 4
MIRT537546 ETNK1 ethanolamine kinase 1 2 2
MIRT541619 C11orf31 selenoprotein H 2 2
MIRT548380 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT549523 HDDC2 HD domain containing 2 2 2
MIRT549774 SOD2 superoxide dismutase 2 2 2
MIRT550578 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551498 CENPN centromere protein N 2 4
MIRT552301 ITGA3 integrin subunit alpha 3 2 2
MIRT555400 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT556399 LUC7L LUC7 like 2 2
MIRT557047 HOXB3 homeobox B3 2 2
MIRT558072 ERO1L endoplasmic reticulum oxidoreductase 1 alpha 1 2
MIRT559659 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT561239 ZNF354B zinc finger protein 354B 2 2
MIRT566899 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT568786 FAM120B family with sequence similarity 120B 2 2
MIRT574014 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT574885 Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 2 2
MIRT575243 Serping1 serine (or cysteine) peptidase inhibitor, clade G, member 1 2 2
MIRT576194 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576309 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576484 Lhx4 LIM homeobox protein 4 2 3
MIRT576646 Mill2 MHC I like leukocyte 2 1 1
MIRT576708 Kras Kirsten rat sarcoma viral oncogene homolog 2 2
MIRT576855 Socs6 suppressor of cytokine signaling 6 2 2
MIRT576950 Aldoa aldolase A, fructose-bisphosphate 2 2
MIRT617133 ZNF556 zinc finger protein 556 2 4
MIRT617928 ZNF783 zinc finger family member 783 2 2
MIRT618981 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT621100 SIX3 SIX homeobox 3 2 2
MIRT624537 BROX BRO1 domain and CAAX motif containing 2 2
MIRT625663 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT627059 DCTN6 dynactin subunit 6 2 2
MIRT628319 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT630859 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT632295 TMEM65 transmembrane protein 65 2 2
MIRT634115 ZNF207 zinc finger protein 207 2 2
MIRT634736 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT635655 NDST3 N-deacetylase and N-sulfotransferase 3 2 2
MIRT635772 PDCL3 phosducin like 3 2 2
MIRT635911 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT636365 OGFRL1 opioid growth factor receptor like 1 2 4
MIRT637251 GLRX2 glutaredoxin 2 2 2
MIRT638705 FZD4 frizzled class receptor 4 2 2
MIRT639640 PREX2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 2 2
MIRT639676 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT642267 SMIM17 small integral membrane protein 17 2 2
MIRT642372 ZNF581 zinc finger protein 581 2 2
MIRT643545 SLC25A17 solute carrier family 25 member 17 2 2
MIRT647994 PDE12 phosphodiesterase 12 2 2
MIRT649094 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT650993 ZNF770 zinc finger protein 770 2 2
MIRT651956 UBE2N ubiquitin conjugating enzyme E2 N 2 2
MIRT652977 SUN2 Sad1 and UNC84 domain containing 2 2 2
MIRT654389 RBM12B RNA binding motif protein 12B 2 2
MIRT655637 OLFML2A olfactomedin like 2A 2 2
MIRT655729 NRXN3 neurexin 3 2 2
MIRT658171 FCHSD1 FCH and double SH3 domains 1 2 2
MIRT660937 ACOX1 acyl-CoA oxidase 1 2 2
MIRT662112 CERKL ceramide kinase like 2 2
MIRT662302 MPV17L MPV17 mitochondrial inner membrane protein like 2 2
MIRT662993 TMEM59 transmembrane protein 59 2 2
MIRT663071 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT663704 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663864 MUC20 mucin 20, cell surface associated 2 2
MIRT665185 HAUS5 HAUS augmin like complex subunit 5 2 4
MIRT665402 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT665688 TNPO3 transportin 3 2 2
MIRT665795 TMEM170A transmembrane protein 170A 2 2
MIRT665847 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT666999 PDPN podoplanin 2 2
MIRT667598 LIPC lipase C, hepatic type 2 2
MIRT668576 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT670960 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT671187 ZNF891 zinc finger protein 891 2 2
MIRT671739 ZNF451 zinc finger protein 451 2 2
MIRT672745 ZNF585B zinc finger protein 585B 2 4
MIRT673446 ZNF583 zinc finger protein 583 2 2
MIRT679843 GPR75 G protein-coupled receptor 75 2 2
MIRT680556 ZNF584 zinc finger protein 584 2 2
MIRT680661 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT681285 RFC2 replication factor C subunit 2 2 2
MIRT683264 ZNF329 zinc finger protein 329 2 2
MIRT684519 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT685065 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685157 DTWD2 DTW domain containing 2 2 2
MIRT685168 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT685470 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT686001 NEK4 NIMA related kinase 4 2 2
MIRT687027 RNF24 ring finger protein 24 2 2
MIRT687543 MOB1B MOB kinase activator 1B 2 2
MIRT687592 MANEAL mannosidase endo-alpha like 2 2
MIRT687753 KIAA1328 KIAA1328 2 2
MIRT688050 GLUL glutamate-ammonia ligase 2 2
MIRT688374 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 2 2
MIRT688802 CBFA2T3 CBFA2/RUNX1 translocation partner 3 2 2
MIRT688957 ATXN3 ataxin 3 2 2
MIRT689281 C5AR2 complement component 5a receptor 2 2 2
MIRT689988 NNMT nicotinamide N-methyltransferase 2 2
MIRT689997 MMP17 matrix metallopeptidase 17 2 2
MIRT690014 LUZP2 leucine zipper protein 2 2 2
MIRT690161 ELP3 elongator acetyltransferase complex subunit 3 2 2
MIRT690379 ZSWIM7 zinc finger SWIM-type containing 7 2 2
MIRT690563 MICA MHC class I polypeptide-related sequence A 2 2
MIRT691891 EVC EvC ciliary complex subunit 1 2 2
MIRT693107 SCNM1 sodium channel modifier 1 2 2
MIRT693832 ZFP64 ZFP64 zinc finger protein 2 2
MIRT694105 ZNF446 zinc finger protein 446 2 2
MIRT694179 ZNF486 zinc finger protein 486 2 2
MIRT694475 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT694998 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 2 2
MIRT695031 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT695163 TCTN2 tectonic family member 2 2 2
MIRT695525 SLC25A34 solute carrier family 25 member 34 2 2
MIRT696067 ZNF264 zinc finger protein 264 2 2
MIRT696616 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT696661 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696705 PNPO pyridoxamine 5'-phosphate oxidase 2 2
MIRT697173 INMT indolethylamine N-methyltransferase 2 2
MIRT697303 ZNF652 zinc finger protein 652 2 2
MIRT697491 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT698657 TERF2 telomeric repeat binding factor 2 2 2
MIRT699042 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699185 SLX4IP SLX4 interacting protein 2 2
MIRT699598 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT700150 RNF115 ring finger protein 115 2 2
MIRT700720 PNO1 partner of NOB1 homolog 2 2
MIRT700870 PER2 period circadian clock 2 2 2
MIRT700912 PDXK pyridoxal kinase 2 2
MIRT701095 PAPOLG poly(A) polymerase gamma 2 2
MIRT701194 OTUD3 OTU deubiquitinase 3 2 2
MIRT702203 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT702272 LHX4 LIM homeobox 4 2 3
MIRT703125 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT703252 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT703262 GNL3L G protein nucleolar 3 like 2 2
MIRT703440 FYTTD1 forty-two-three domain containing 1 2 2
MIRT704321 DCUN1D5 defective in cullin neddylation 1 domain containing 5 2 2
MIRT704393 CTSS cathepsin S 2 2
MIRT704483 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT704880 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT704926 CCDC36 coiled-coil domain containing 36 2 2
MIRT705175 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT706561 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT707048 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT711497 PGD phosphogluconate dehydrogenase 2 2
MIRT716644 EPGN epithelial mitogen 2 2
MIRT720083 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT722288 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT725468 GRAP2 GRB2-related adaptor protein 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4433a Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-4433a Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-mir-4433a Vincristine 5978 approved resistant cell line (W1)
hsa-mir-4433a Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4433a-3p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Pancreatic Cancer cell line (BxPC-3)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (mitochondrial RNA)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-4433a-3p Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

Error report submission