pre-miRNA Information
pre-miRNA hsa-mir-873   
Genomic Coordinates chr9: 28888879 - 28888955
Synonyms MIRN873, hsa-mir-873, MIR873
Description Homo sapiens miR-873 stem-loop
Comment This sequence was identified as a miRNA candidate by Berezikov et al. using RAKE and MPSS techniques .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-873-3p
Sequence 46| GGAGACUGAUGAGUUCCCGGGA |67
Evidence Not_experimental
Experiments
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs760528397 3 dbSNP
rs773403294 9 dbSNP
rs1273846238 13 dbSNP
rs1339396073 15 dbSNP
rs1247999695 18 dbSNP
rs377380148 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol FAM102B   
Synonyms SYM-3B
Description family with sequence similarity 102 member B
Transcript NM_001010883   
Expression
Putative miRNA Targets on FAM102B
3'UTR of FAM102B
(miRNA target sites are highlighted)
>FAM102B|NM_001010883|3'UTR
   1 AAGTCAAGTCGGTGAAAACATTTCCTTGTGGATTTAAGATGTGAGTAGTTGATGTATCAAGGCATTTTATTCAAGCACTT
  81 AATAGAAAATGAACCTCAACTATCAAGAGGAAAGCCAATGCTGGTTTCTTCTCTGGAAGGACCCACCGCCATCCTGTACC
 161 AGCCACCAAAGGGGAACATCTACATGGCAGTCTCCAGGCACTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGG
 241 TCACTGCACATCATAATGAAAAGCCTGCTTTTTCTTTCAGAACACCCCAGCGGAGAAAACAGCATTATATACATCGGAGT
 321 ATCATTTTAGGATTCAAGTGTAAAAATCTGTGATCAAGAGGCTCAATAGATTTGGGCTCTATGGTTTGGTTTTTTTAGTT
 401 TGAGAGACAGTACATGAATATAACTTAAACCCTATAGATTTTGTCAAGATAGTTGTAATTCCTGTTCTGGAAATCTTCCC
 481 TATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACAATTTAAACATGTGA
 561 TGTGCTTATTCATAATTCTCAGTGTATCAGTCATAAATGAAATAACAAGTGCATTTAAGTCAGAGATACGTGAATGGATG
 641 TAATGCCGTTATGCAGTATATATTGTTAATTGTCATTAATATTAGATGAGCTGCAGAACCACCCCCAAGCACTACATAAA
 721 AGACTCAAAATAAGTTTAACACTTACTGTGTTGGGCACCCTAACAGAAGAGCTATCTTAACTCATTGAATATTAAGATCT
 801 GCTGGTTTCAGGAGTCAAAATGTAGAAAAAGAGGAGAATTGTAATATGGTCAGAAACAGAGAAGCCTTTTCTATGTAAAT
 881 TCAGACTTATCTGAGGCTAACAGTTTTCCGAAGTGGTGGTGGGTAGCAGCATGACAGCTGCTTGCCATGACTGATGCAGA
 961 CTACTAGGTTTCCATTTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTTTTGAAGCAAGA
1041 GTAGAATATAACATCTATCAAATATAGCTTTTAAAATAAGAATACCTGGTCTGGATCCAGTTGAGCAGCACAGCAGATAA
1121 ACCTTAGAGTTTTTCTGTTCTTACATGACGGTTTCCATGTGGAAAGATCTAAACTTTCTTGGAATCACTATTAGTGAAGA
1201 AAAATGTAGAATCTGTATAACCAGTAATTCCCCAATTCTTACTTTCAAAGTCATATCCAAGAAAGACAATATGTCAGAAT
1281 AGAATGACTTTGGTCTAGGTGTTTTCACGTTGGCAAAAATAAGGAGGAAATTATATTATTTTAATATCCAAATTTAAAGG
1361 TTTGGAAAATTTTGAATAGTTAATATTAGAACTTATGTTGCTGTTTTTTATATTTCAAGGATTGAGTATTCTGCATTAAT
1441 CCAATACTATTCCAACAAAGAGATTCTGGAAGTTTTTAAAAAATGATACCCTGTTTTATATTTTGAATGTAGAGAGACTC
1521 TGAGAGAGAGAATGTTCTGAGTTATACTTTTTATTTTTTAAGATTTATTTTTAAGAATAAAACATTGACCTGAACATTTT
1601 AGCCTAACCAAGGGACTTAAGTGGTAAAGACTTGCATTATGTCTTCATGTGAACTGATCCGTTCATTATATATTATGGGA
1681 AAAATCAAAGAAAGTTTTTTATAGAGATATGAAGATATTATTTAGAGAGATATTTATTATGACATTTTTTAAAAACATAT
1761 TTTTCTATTTTCAAAATATTATTTCTAGGCTATATTTTTATTGGTGCTGTGCAAATGATTTTGCAGTTTTGAAAATGATA
1841 AAACTAGATTGTAAGTGGGGTTCAGTGAGGACATTCATCAGACACGTAAGAGGTGCTGCAATCAGGGTGATGCCCATCTT
1921 ACTCATCCTTGGCTGCCCTTGGTCCGACACCTCTCTATACAAGACTGGTTCTCAGTATTTTAAATGGTACAGAATTCTTT
2001 TTAAAAAGTAGAGAGATTTTGAAAAGCATAAAAATCATGCCTTTATAATCTTAGCAGCCATCAGATACACCTTGATTTAT
2081 GTAGTAGTAAATATAACAAATATTTTAATAAATAGAAACACTGATAAGGAAGAAAAAAGAACTAATGTCTATGTCTTCTG
2161 TAGTCAGCAAAAGTCTGGATCCATTTTCTATTTTGTGTTCCATTGGCACACTTTGTGTTCAAATTTCAGTGCAGTCCTTT
2241 CAAAATACTCGCTAAGGGTTGCCTAAGTGTCTGCCTTACTTTCTGATTGTCCTTTTCTGAGAGCATGGTTAAGAACATCT
2321 TAACCATATAGCTGTTGAAAAAATCTGTTTATTAAATAACAAGTTCACTTCTGTTTATGTTTTGAGTTTAGAAAATTTGA
2401 CTTGAAAATTTAGATTATTAATAAATTTATTTTTAAATATTAAAGTCAAATTTCAAATCACCCAGTGTTGAAGAATTTGC
2481 AGATGTATACAATACTTTTTCTAATTATGTCTTTTCTATCTCCATGCCTGGCTTTTTCTAATTATATCCTAGAGAAAAAG
2561 ACTAATGGTATTTCAAAGCTGTGTATTTGTGACGAGATAAAGAAGAGTCTTAAACATCTTGTTTGGGAGAATGCACAGGC
2641 CAGTCAGGAGACCCACCTCCTCCTGTGCCCTGAGCTGCTGAGACCCGACAGATCATGAAGGCTAGTAAAGGGCAGAGAAG
2721 GCCCTGAGCCATCAGTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATACCAACAGCTAAT
2801 GTGGATTAGTGCTTATGATCTTGAAAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAACAC
2881 TATCAGAATAATATCCAAATTCCAGATTTTTTTCTTTTTTACTTTTTTTTCTTCCTTTTTTAAGAGAGACAGTGTCTTGC
2961 TCGGTCACCTAGGCTGGAGTGTAGTGGCGCAATCGTTGCTCACTACAGCCTCCCAACTCCCAGGCTCAAATGAGCCTCCC
3041 ACCTTGGCCTCCCAAAGTGCTAGGACCACAGGCATGAGCCACTGTGCCCAGCCTAGTTTCTTTTCTGTATGCTTTTTTTA
3121 CAAAACTGTGAGCCACAGAGGTTGACCACTTAGCCAATTTGTTGCTAGAAGGGAGAAAAAAATCTCCAACTAGCCTCCAG
3201 ACAAAACATACTCAAATTCAAACAGCAGTTAGTTTTAATTAACATACAGAAGTAATTTTAGACTTTCAGATTTCTATGCT
3281 GACTAGAACACTTTGCAGGCTGAAGCTGACATTATTACCAAATACTTCATTTAAGTACATACTCTGAAGTGTCAGGCTTC
3361 CAGTATATATAGCAACGCTCTGAGAGACAAACTGGGCTCATATGACGGGGTTGCATTTTATTTTCTTAACAGGTCTTTAA
3441 ATTGGGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCAACCAAGCACTGTAGTTGAAATT
3521 GTGTTATGCCACTACTCATATGTTGTCTTAGGTACTACGCATAATGTTAATAGCTGAGATGTTAAAGAATTTGAAGTCTA
3601 AAATATAAAAGATGAATATACCCATATTAATCCTATGTTAAGATGCTCTGGAAATAAAGGCCTTATTCCCTTACACATGC
3681 GATTTTTGTAAGATAATATATACACAGTATATTTTAAATGTTTGTGTGGGTGGTCTGTGTAGTTACTCCCCATACAACAA
3761 AGCTGACAAAATTTTTAATTTACACAATGTATTCTGCATTTTCAAATGTTTATGTTGTGTATATAGCAAAGAAATTATCT
3841 TACTGATATGCGTTGACCAAATCCCATGGAGAAAAGACATCTCATTTGAGGTTCCCCTTCCTCTCATGTGTTTGATTTTT
3921 TGGAAGGTGATACAGTATGTGGGTAACCATGCAAATGTTTATGAATAACTTTACTGAAGTGATTCCATCCGTATTCTGTT
4001 CTAATACTTGGAGAATGACCTTCATATTTATATATTTTATTTCTTTGTTTCAACTATCCAGTGATAATTCAGGAAATGTT
4081 TCCTTTTTTTTTTTTTTTTACAAAAACTTTTTATTTGTAAAATGTTTGTAATAATGTAAAGGTGAACATGTTCAATAAAA
4161 ATCATATATTAAAAGTTTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agggCCCUU---GA-GUA--GUCAGAGg 5'
              |||||   || |||  ||||||| 
Target 5' aaagGGGAACATCTACATGGCAGTCTCc 3'
168 - 195 160.00 -22.90
2
miRNA  3' agGGCCCUUGAGUAGUCAGAgg 5'
            ||  ||:| |||||||:|  
Target 5' ggCCCTGAGC-CATCAGTTTac 3'
2720 - 2740 131.00 -19.30
3
miRNA  3' agggcccUUGAGUAGUCAGAGg 5'
                 |||||  ||| ||| 
Target 5' gcctcccAACTC-CCAGGCTCa 3'
3008 - 3028 122.00 -14.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31538488 11 COSMIC
COSN30658026 17 COSMIC
COSN6502029 31 COSMIC
COSN31502051 33 COSMIC
COSN30107415 44 COSMIC
COSN30529041 48 COSMIC
COSN30100356 51 COSMIC
COSN31604184 73 COSMIC
COSN31600912 103 COSMIC
COSN31612983 144 COSMIC
COSN17038222 1114 COSMIC
COSN15932989 1310 COSMIC
COSN21752625 1717 COSMIC
COSN17182985 1902 COSMIC
COSN5352611 1936 COSMIC
COSN22010009 2122 COSMIC
COSN31483086 2634 COSMIC
COSN31577067 2725 COSMIC
COSN31565745 2824 COSMIC
COSN31547935 2832 COSMIC
COSN31520778 2852 COSMIC
COSN31603276 2868 COSMIC
COSN22087818 3248 COSMIC
COSN1400718 3449 COSMIC
COSN20095092 3540 COSMIC
COSN5998084 3618 COSMIC
COSN29802829 3727 COSMIC
COSN7171458 3784 COSMIC
COSN24230429 3953 COSMIC
COSN19030518 4045 COSMIC
COSN27609020 4077 COSMIC
COSN20095098 4098 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs755839292 4 dbSNP
rs921339480 6 dbSNP
rs201749748 9 dbSNP
rs753502382 11 dbSNP
rs754559561 12 dbSNP
rs1388761038 13 dbSNP
rs201335946 15 dbSNP
rs776972439 15 dbSNP
rs748877332 18 dbSNP
rs41278478 31 dbSNP
rs771737802 32 dbSNP
rs752689265 38 dbSNP
rs1384009271 42 dbSNP
rs775392277 43 dbSNP
rs377241428 48 dbSNP
rs746746296 53 dbSNP
rs200324562 54 dbSNP
rs1472639676 56 dbSNP
rs1367108502 57 dbSNP
rs1277863316 58 dbSNP
rs1052933573 63 dbSNP
rs1324507884 64 dbSNP
rs1465718001 65 dbSNP
rs1248003662 77 dbSNP
rs1205691678 79 dbSNP
rs895815897 84 dbSNP
rs893056497 95 dbSNP
rs372276354 110 dbSNP
rs1290788883 119 dbSNP
rs1227985434 125 dbSNP
rs1355330784 132 dbSNP
rs1014248259 144 dbSNP
rs1230403611 148 dbSNP
rs1254365407 148 dbSNP
rs551897160 149 dbSNP
rs188604153 152 dbSNP
rs1351127451 158 dbSNP
rs531355070 160 dbSNP
rs969719488 173 dbSNP
rs1002018662 181 dbSNP
rs1264479405 185 dbSNP
rs540375337 191 dbSNP
rs1032571607 212 dbSNP
rs370345928 212 dbSNP
rs530664464 212 dbSNP
rs748241550 212 dbSNP
rs879676180 212 dbSNP
rs770267981 214 dbSNP
rs987881678 217 dbSNP
rs535665754 225 dbSNP
rs1220982748 228 dbSNP
rs1450063901 229 dbSNP
rs574362687 230 dbSNP
rs1207025004 234 dbSNP
rs1422526108 248 dbSNP
rs1480578376 260 dbSNP
rs970199790 264 dbSNP
rs954320441 269 dbSNP
rs1375439928 279 dbSNP
rs560098170 292 dbSNP
rs910774073 293 dbSNP
rs776792497 298 dbSNP
rs1328984909 301 dbSNP
rs76503936 305 dbSNP
rs1430738746 308 dbSNP
rs1397961944 314 dbSNP
rs950336504 316 dbSNP
rs546002868 317 dbSNP
rs1426548716 338 dbSNP
rs562996338 339 dbSNP
rs929512734 357 dbSNP
rs1477122485 361 dbSNP
rs908756413 365 dbSNP
rs193241177 367 dbSNP
rs1345863224 368 dbSNP
rs1183175866 370 dbSNP
rs1047800860 380 dbSNP
rs1273685421 381 dbSNP
rs974632587 382 dbSNP
rs1313859502 389 dbSNP
rs1279316543 390 dbSNP
rs1218059145 391 dbSNP
rs1342278878 392 dbSNP
rs1311750968 397 dbSNP
rs1410088918 399 dbSNP
rs1014176196 402 dbSNP
rs1239849560 406 dbSNP
rs150447186 407 dbSNP
rs1360250465 410 dbSNP
rs138232297 416 dbSNP
rs1216474049 421 dbSNP
rs1414304272 422 dbSNP
rs1160126567 423 dbSNP
rs1002516856 436 dbSNP
rs1270081214 439 dbSNP
rs1175253551 453 dbSNP
rs1484150738 457 dbSNP
rs1237927534 463 dbSNP
rs1051158831 468 dbSNP
rs1490925865 487 dbSNP
rs1192573261 502 dbSNP
rs1032294425 505 dbSNP
rs912652997 514 dbSNP
rs1269448248 515 dbSNP
rs1309895268 515 dbSNP
rs934623328 518 dbSNP
rs1264819803 526 dbSNP
rs1328037247 541 dbSNP
rs957854818 555 dbSNP
rs1230317599 556 dbSNP
rs1380372246 581 dbSNP
rs1159161231 585 dbSNP
rs1446506429 587 dbSNP
rs1382137307 595 dbSNP
rs1009403213 604 dbSNP
rs1456834364 612 dbSNP
rs1157922083 617 dbSNP
rs1167191794 629 dbSNP
rs527983319 629 dbSNP
rs1365970671 631 dbSNP
rs1425283856 648 dbSNP
rs1438345466 649 dbSNP
rs547931631 653 dbSNP
rs954455645 654 dbSNP
rs1053089281 659 dbSNP
rs1367149235 665 dbSNP
rs893048314 666 dbSNP
rs1459906219 674 dbSNP
rs568353094 677 dbSNP
rs910192822 678 dbSNP
rs1044605069 680 dbSNP
rs1258526871 683 dbSNP
rs1223350384 687 dbSNP
rs905675134 688 dbSNP
rs1322658458 694 dbSNP
rs1003135097 703 dbSNP
rs1035407123 705 dbSNP
rs1311601243 713 dbSNP
rs886194201 717 dbSNP
rs1004541359 722 dbSNP
rs1240080848 735 dbSNP
rs920898189 740 dbSNP
rs1362120280 745 dbSNP
rs184859008 759 dbSNP
rs749734754 760 dbSNP
rs963267458 767 dbSNP
rs1163788048 773 dbSNP
rs752020008 775 dbSNP
rs1442615537 777 dbSNP
rs1244669673 786 dbSNP
rs1487936623 788 dbSNP
rs1189149660 790 dbSNP
rs1029005339 794 dbSNP
rs1259098243 800 dbSNP
rs1211156437 810 dbSNP
rs1488591724 815 dbSNP
rs954204109 835 dbSNP
rs1239487365 841 dbSNP
rs1344764510 846 dbSNP
rs1275903257 867 dbSNP
rs764775046 873 dbSNP
rs950118426 874 dbSNP
rs1044514388 889 dbSNP
rs755707707 891 dbSNP
rs905850784 896 dbSNP
rs1367162391 899 dbSNP
rs1178016861 903 dbSNP
rs1385772472 911 dbSNP
rs1422449635 921 dbSNP
rs986931583 921 dbSNP
rs912643132 933 dbSNP
rs1406925924 935 dbSNP
rs1162400362 941 dbSNP
rs116364356 944 dbSNP
rs538702154 945 dbSNP
rs1428995755 949 dbSNP
rs988760108 951 dbSNP
rs1371317565 958 dbSNP
rs1462710886 962 dbSNP
rs777409852 964 dbSNP
rs149172979 965 dbSNP
rs1266148667 975 dbSNP
rs1196853062 981 dbSNP
rs1009372120 982 dbSNP
rs1484218212 987 dbSNP
rs1204954748 991 dbSNP
rs1338001176 996 dbSNP
rs868398614 1001 dbSNP
rs1233970658 1008 dbSNP
rs905785400 1014 dbSNP
rs568646646 1016 dbSNP
rs1316418828 1017 dbSNP
rs537440168 1021 dbSNP
rs1009052399 1037 dbSNP
rs1351383746 1039 dbSNP
rs1381938067 1048 dbSNP
rs1017390267 1049 dbSNP
rs938490778 1050 dbSNP
rs1227005122 1054 dbSNP
rs1289655234 1055 dbSNP
rs973095950 1059 dbSNP
rs373663016 1060 dbSNP
rs555563324 1060 dbSNP
rs116938760 1066 dbSNP
rs886174654 1075 dbSNP
rs917400957 1083 dbSNP
rs756786719 1084 dbSNP
rs574634610 1085 dbSNP
rs1456112448 1086 dbSNP
rs746378042 1087 dbSNP
rs778539079 1100 dbSNP
rs535628160 1126 dbSNP
rs1197433471 1130 dbSNP
rs533857642 1144 dbSNP
rs1201549104 1146 dbSNP
rs950252024 1151 dbSNP
rs1261305674 1153 dbSNP
rs1230365680 1159 dbSNP
rs1243717716 1166 dbSNP
rs1473756879 1169 dbSNP
rs1180000408 1189 dbSNP
rs78040087 1194 dbSNP
rs898802816 1195 dbSNP
rs1336038935 1206 dbSNP
rs547554045 1211 dbSNP
rs1405326165 1212 dbSNP
rs1334102744 1214 dbSNP
rs1028534795 1225 dbSNP
rs935963828 1231 dbSNP
rs1173174955 1233 dbSNP
rs146525774 1236 dbSNP
rs546052483 1238 dbSNP
rs1337435589 1240 dbSNP
rs945256297 1243 dbSNP
rs1042357934 1244 dbSNP
rs1019771421 1251 dbSNP
rs1241896949 1255 dbSNP
rs1210670206 1265 dbSNP
rs1360925097 1270 dbSNP
rs1465406504 1285 dbSNP
rs1446489220 1295 dbSNP
rs779697211 1309 dbSNP
rs988833514 1310 dbSNP
rs1348227110 1326 dbSNP
rs1285707806 1330 dbSNP
rs1220837606 1336 dbSNP
rs77856044 1348 dbSNP
rs1017735883 1355 dbSNP
rs1312836679 1383 dbSNP
rs7533972 1396 dbSNP
rs980514266 1397 dbSNP
rs994884691 1427 dbSNP
rs376360395 1428 dbSNP
rs927231710 1436 dbSNP
rs139082283 1445 dbSNP
rs1164188524 1450 dbSNP
rs950415228 1453 dbSNP
rs1383859528 1457 dbSNP
rs1278742874 1465 dbSNP
rs561951050 1479 dbSNP
rs1056966186 1494 dbSNP
rs777023965 1518 dbSNP
rs1247528395 1519 dbSNP
rs1453529695 1520 dbSNP
rs1290941075 1521 dbSNP
rs1210143073 1522 dbSNP
rs1358476393 1522 dbSNP
rs907683470 1522 dbSNP
rs940517093 1533 dbSNP
rs1289441496 1535 dbSNP
rs1037420502 1545 dbSNP
rs898912209 1551 dbSNP
rs1488525467 1554 dbSNP
rs1365887629 1561 dbSNP
rs1024549320 1562 dbSNP
rs1428117482 1576 dbSNP
rs971930895 1579 dbSNP
rs1323817463 1586 dbSNP
rs1424360605 1587 dbSNP
rs1364126807 1595 dbSNP
rs1195541980 1596 dbSNP
rs1430920286 1603 dbSNP
rs980303364 1604 dbSNP
rs1166225678 1612 dbSNP
rs1479050003 1613 dbSNP
rs1477636391 1615 dbSNP
rs927340827 1619 dbSNP
rs995853528 1636 dbSNP
rs1427369931 1640 dbSNP
rs35090431 1641 dbSNP
rs765391582 1641 dbSNP
rs1334153673 1642 dbSNP
rs1272288608 1644 dbSNP
rs913224246 1661 dbSNP
rs1346525514 1662 dbSNP
rs946065651 1670 dbSNP
rs1042326634 1671 dbSNP
rs1343298698 1687 dbSNP
rs774930631 1692 dbSNP
rs1050547348 1699 dbSNP
rs1354393683 1704 dbSNP
rs1327450202 1707 dbSNP
rs1425997515 1715 dbSNP
rs1402289271 1716 dbSNP
rs944506588 1720 dbSNP
rs1414544362 1723 dbSNP
rs1340244905 1724 dbSNP
rs1480840902 1725 dbSNP
rs1232177768 1731 dbSNP
rs1202385762 1732 dbSNP
rs1217655450 1734 dbSNP
rs1443604209 1734 dbSNP
rs890031624 1743 dbSNP
rs1038881963 1744 dbSNP
rs1275010970 1744 dbSNP
rs537748868 1757 dbSNP
rs1216953747 1758 dbSNP
rs1229330097 1761 dbSNP
rs900228572 1765 dbSNP
rs1008458821 1768 dbSNP
rs994579306 1769 dbSNP
rs527953529 1773 dbSNP
rs1220330082 1777 dbSNP
rs1354285771 1777 dbSNP
rs1019843093 1797 dbSNP
rs1360295484 1799 dbSNP
rs1048828766 1803 dbSNP
rs956179519 1804 dbSNP
rs886101899 1805 dbSNP
rs1010371374 1821 dbSNP
rs142946785 1835 dbSNP
rs1160203632 1851 dbSNP
rs1419403942 1865 dbSNP
rs760239085 1871 dbSNP
rs1487805491 1880 dbSNP
rs1175307039 1882 dbSNP
rs60782505 1883 dbSNP
rs1024475543 1885 dbSNP
rs564832645 1886 dbSNP
rs1248660505 1887 dbSNP
rs1483741365 1887 dbSNP
rs1202411780 1897 dbSNP
rs1459601170 1899 dbSNP
rs971685268 1909 dbSNP
rs1002084970 1913 dbSNP
rs980120406 1939 dbSNP
rs533348525 1946 dbSNP
rs112795449 1947 dbSNP
rs990226977 1951 dbSNP
rs1408757177 1952 dbSNP
rs960045020 1958 dbSNP
rs913359897 1966 dbSNP
rs992712664 1967 dbSNP
rs1453283830 1971 dbSNP
rs907801158 1987 dbSNP
rs1422088554 1989 dbSNP
rs967333627 1992 dbSNP
rs1157325967 1993 dbSNP
rs188057334 1996 dbSNP
rs761934807 1999 dbSNP
rs5006160 2000 dbSNP
rs1249307514 2008 dbSNP
rs944660102 2016 dbSNP
rs1332440158 2022 dbSNP
rs1485331190 2025 dbSNP
rs1258662784 2037 dbSNP
rs931754210 2038 dbSNP
rs1360639950 2048 dbSNP
rs191414382 2060 dbSNP
rs1244462520 2072 dbSNP
rs1039388252 2074 dbSNP
rs1298396257 2076 dbSNP
rs558183943 2081 dbSNP
rs1360047778 2088 dbSNP
rs1050077897 2089 dbSNP
rs1438287260 2090 dbSNP
rs890096266 2094 dbSNP
rs1365995288 2096 dbSNP
rs1162735703 2101 dbSNP
rs921776310 2107 dbSNP
rs1392008632 2114 dbSNP
rs1008531702 2116 dbSNP
rs1242241306 2121 dbSNP
rs1283712636 2126 dbSNP
rs1041250108 2130 dbSNP
rs1490605233 2133 dbSNP
rs930510852 2136 dbSNP
rs1048758163 2137 dbSNP
rs886194935 2142 dbSNP
rs1004475938 2143 dbSNP
rs1352796809 2150 dbSNP
rs567985952 2152 dbSNP
rs1303625244 2154 dbSNP
rs1220002062 2167 dbSNP
rs576381656 2171 dbSNP
rs1450118563 2174 dbSNP
rs753838173 2177 dbSNP
rs1372262249 2178 dbSNP
rs1198366380 2191 dbSNP
rs906886081 2196 dbSNP
rs773409152 2204 dbSNP
rs1238884748 2215 dbSNP
rs1480547257 2217 dbSNP
rs1441553584 2226 dbSNP
rs1001779807 2236 dbSNP
rs1251807379 2242 dbSNP
rs1380215634 2247 dbSNP
rs1035049874 2249 dbSNP
rs115683881 2252 dbSNP
rs1257808502 2257 dbSNP
rs1388969329 2259 dbSNP
rs1403263457 2260 dbSNP
rs1011754894 2266 dbSNP
rs2358529 2267 dbSNP
rs1221405331 2268 dbSNP
rs1337336535 2269 dbSNP
rs1307575962 2271 dbSNP
rs766921213 2273 dbSNP
rs1390722711 2280 dbSNP
rs1001999854 2284 dbSNP
rs967470790 2293 dbSNP
rs1304065471 2299 dbSNP
rs751802225 2300 dbSNP
rs986777304 2303 dbSNP
rs1404818679 2304 dbSNP
rs1173839343 2305 dbSNP
rs1019595250 2318 dbSNP
rs1376997905 2320 dbSNP
rs964421683 2328 dbSNP
rs759922094 2336 dbSNP
rs1258958323 2338 dbSNP
rs992830733 2339 dbSNP
rs921845541 2345 dbSNP
rs577105606 2346 dbSNP
rs930443354 2348 dbSNP
rs1351727438 2350 dbSNP
rs1261073117 2358 dbSNP
rs539638460 2361 dbSNP
rs907791335 2377 dbSNP
rs984599423 2385 dbSNP
rs961988478 2402 dbSNP
rs1333905767 2406 dbSNP
rs1452665578 2414 dbSNP
rs763684780 2414 dbSNP
rs908740311 2422 dbSNP
rs577543670 2424 dbSNP
rs1045917836 2431 dbSNP
rs1209479035 2466 dbSNP
rs1258947786 2473 dbSNP
rs556393815 2485 dbSNP
rs1158344920 2488 dbSNP
rs1196800349 2491 dbSNP
rs1370644193 2492 dbSNP
rs1184778194 2493 dbSNP
rs765167829 2494 dbSNP
rs1238140546 2495 dbSNP
rs1190658904 2509 dbSNP
rs931853811 2512 dbSNP
rs372983634 2532 dbSNP
rs1190158901 2543 dbSNP
rs1367100159 2548 dbSNP
rs1293802336 2551 dbSNP
rs1472635689 2551 dbSNP
rs1358703470 2562 dbSNP
rs41278480 2562 dbSNP
rs911650506 2565 dbSNP
rs1163841826 2566 dbSNP
rs944338657 2571 dbSNP
rs1052091624 2576 dbSNP
rs1466769913 2581 dbSNP
rs1011723627 2585 dbSNP
rs755304765 2586 dbSNP
rs892041758 2594 dbSNP
rs1398860349 2595 dbSNP
rs946322487 2596 dbSNP
rs1367888420 2611 dbSNP
rs1164660308 2616 dbSNP
rs542360526 2624 dbSNP
rs756948317 2633 dbSNP
rs1424563839 2638 dbSNP
rs903377918 2654 dbSNP
rs1008305188 2660 dbSNP
rs1475786501 2668 dbSNP
rs562088737 2673 dbSNP
rs778285471 2686 dbSNP
rs1043330550 2687 dbSNP
rs1338556568 2688 dbSNP
rs1223023751 2692 dbSNP
rs975825647 2694 dbSNP
rs1289505776 2702 dbSNP
rs1243782106 2711 dbSNP
rs1215753820 2715 dbSNP
rs1279139418 2721 dbSNP
rs1320227802 2728 dbSNP
rs1269189212 2729 dbSNP
rs1216982892 2743 dbSNP
rs904658427 2745 dbSNP
rs1001717366 2746 dbSNP
rs1483583823 2748 dbSNP
rs951981944 2752 dbSNP
rs984695700 2756 dbSNP
rs539877824 2758 dbSNP
rs1430326428 2762 dbSNP
rs1199786434 2764 dbSNP
rs940560652 2777 dbSNP
rs1266621850 2786 dbSNP
rs1206574643 2791 dbSNP
rs781469168 2792 dbSNP
rs1271659013 2796 dbSNP
rs1193636268 2797 dbSNP
rs1325238771 2797 dbSNP
rs1442264679 2800 dbSNP
rs1283533082 2813 dbSNP
rs1223222638 2824 dbSNP
rs981212871 2828 dbSNP
rs895942316 2832 dbSNP
rs1281680642 2853 dbSNP
rs928377931 2856 dbSNP
rs1354528371 2862 dbSNP
rs1426181647 2872 dbSNP
rs541450016 2874 dbSNP
rs1407029491 2879 dbSNP
rs1176003224 2880 dbSNP
rs1168023445 2891 dbSNP
rs564615207 2899 dbSNP
rs1055881711 2900 dbSNP
rs893371489 2901 dbSNP
rs1372008817 2913 dbSNP
rs1466104062 2919 dbSNP
rs1470466084 2923 dbSNP
rs570058842 2923 dbSNP
rs1042022146 2926 dbSNP
rs759407861 2931 dbSNP
rs1399955381 2932 dbSNP
rs1413981074 2935 dbSNP
rs1263326697 2936 dbSNP
rs1014961516 2937 dbSNP
rs1202677000 2949 dbSNP
rs1298611950 2951 dbSNP
rs1321031291 2963 dbSNP
rs1286765004 2964 dbSNP
rs961937898 2984 dbSNP
rs748248812 2989 dbSNP
rs1373155139 2990 dbSNP
rs750011378 2995 dbSNP
rs1398395344 2996 dbSNP
rs1383657390 3003 dbSNP
rs1336204882 3007 dbSNP
rs1027586852 3010 dbSNP
rs1277728414 3010 dbSNP
rs1347236582 3017 dbSNP
rs1161020813 3031 dbSNP
rs1401079746 3036 dbSNP
rs1407087216 3042 dbSNP
rs533494041 3049 dbSNP
rs953300298 3068 dbSNP
rs1254811348 3071 dbSNP
rs1344965101 3073 dbSNP
rs985986879 3075 dbSNP
rs1216879698 3083 dbSNP
rs911640707 3088 dbSNP
rs1282721152 3091 dbSNP
rs1248762542 3103 dbSNP
rs147011871 3105 dbSNP
rs899927126 3113 dbSNP
rs1450627174 3128 dbSNP
rs758214526 3130 dbSNP
rs1487474787 3136 dbSNP
rs1289686115 3145 dbSNP
rs996832540 3149 dbSNP
rs1344423422 3159 dbSNP
rs944495700 3169 dbSNP
rs1191150852 3173 dbSNP
rs1156659082 3176 dbSNP
rs796699658 3176 dbSNP
rs563554430 3177 dbSNP
rs531276113 3190 dbSNP
rs1177570987 3209 dbSNP
rs1186773563 3212 dbSNP
rs1261451091 3227 dbSNP
rs1375385956 3227 dbSNP
rs547858989 3229 dbSNP
rs1490655415 3233 dbSNP
rs1159113756 3235 dbSNP
rs1006086360 3245 dbSNP
rs1014832535 3250 dbSNP
rs1214176881 3268 dbSNP
rs1296519552 3268 dbSNP
rs961815165 3271 dbSNP
rs981691189 3272 dbSNP
rs946413464 3274 dbSNP
rs958718324 3277 dbSNP
rs1455899056 3280 dbSNP
rs1043665857 3292 dbSNP
rs991280247 3305 dbSNP
rs1170591782 3311 dbSNP
rs904773978 3312 dbSNP
rs1368542651 3316 dbSNP
rs1388703117 3317 dbSNP
rs937503120 3320 dbSNP
rs780047975 3322 dbSNP
rs148050810 3326 dbSNP
rs944189637 3330 dbSNP
rs1041626043 3336 dbSNP
rs1352042965 3339 dbSNP
rs900021961 3341 dbSNP
rs527278854 3343 dbSNP
rs183853149 3348 dbSNP
rs574154387 3352 dbSNP
rs997327166 3361 dbSNP
rs1316221316 3364 dbSNP
rs1048495509 3366 dbSNP
rs1225063617 3367 dbSNP
rs888444855 3369 dbSNP
rs1384983805 3370 dbSNP
rs570606560 3373 dbSNP
rs539751809 3377 dbSNP
rs556361653 3378 dbSNP
rs1178170341 3388 dbSNP
rs1470486768 3392 dbSNP
rs1428993493 3397 dbSNP
rs1197261178 3400 dbSNP
rs1251871440 3401 dbSNP
rs1027946465 3407 dbSNP
rs542062518 3408 dbSNP
rs986362446 3411 dbSNP
rs1204512022 3412 dbSNP
rs376162265 3418 dbSNP
rs958597339 3432 dbSNP
rs1255181073 3435 dbSNP
rs1018765720 3437 dbSNP
rs569889279 3446 dbSNP
rs756228669 3450 dbSNP
rs1307636192 3451 dbSNP
rs1445338101 3459 dbSNP
rs965751977 3460 dbSNP
rs987819535 3463 dbSNP
rs1338184254 3471 dbSNP
rs1452892018 3478 dbSNP
rs913659368 3485 dbSNP
rs968077043 3486 dbSNP
rs977096944 3491 dbSNP
rs1382080743 3495 dbSNP
rs1364825721 3497 dbSNP
rs781183004 3500 dbSNP
rs1417683578 3506 dbSNP
rs1438428052 3510 dbSNP
rs1158063692 3512 dbSNP
rs1184351328 3520 dbSNP
rs12732298 3527 dbSNP
rs555566397 3528 dbSNP
rs1055970 3533 dbSNP
rs10640665 3538 dbSNP
rs397696166 3538 dbSNP
rs370983515 3539 dbSNP
rs200824086 3541 dbSNP
rs869306567 3541 dbSNP
rs1261198460 3542 dbSNP
rs201675575 3543 dbSNP
rs770111351 3549 dbSNP
rs1351486549 3550 dbSNP
rs189930775 3553 dbSNP
rs1452729941 3554 dbSNP
rs371341245 3556 dbSNP
rs771395868 3557 dbSNP
rs950210887 3558 dbSNP
rs1036415336 3566 dbSNP
rs1386091034 3573 dbSNP
rs1313905977 3574 dbSNP
rs897913298 3584 dbSNP
rs111754005 3590 dbSNP
rs995245899 3610 dbSNP
rs1049095766 3619 dbSNP
rs763096333 3620 dbSNP
rs889020738 3623 dbSNP
rs767672754 3628 dbSNP
rs764614417 3631 dbSNP
rs1164223089 3635 dbSNP
rs866431258 3636 dbSNP
rs1223316169 3644 dbSNP
rs1195640816 3648 dbSNP
rs1366888341 3648 dbSNP
rs1263306100 3653 dbSNP
rs1447843896 3654 dbSNP
rs1262146406 3667 dbSNP
rs1467684403 3671 dbSNP
rs558137241 3679 dbSNP
rs147535154 3680 dbSNP
rs1003192343 3681 dbSNP
rs1246007377 3681 dbSNP
rs1018828111 3692 dbSNP
rs1414264686 3698 dbSNP
rs965815361 3702 dbSNP
rs1009356213 3703 dbSNP
rs150569519 3706 dbSNP
rs77609924 3708 dbSNP
rs879397191 3721 dbSNP
rs1021354037 3723 dbSNP
rs1398546000 3735 dbSNP
rs1356778647 3736 dbSNP
rs1367943553 3740 dbSNP
rs1304305496 3742 dbSNP
rs968473456 3748 dbSNP
rs1388632568 3749 dbSNP
rs563666657 3754 dbSNP
rs1475859354 3759 dbSNP
rs1372793667 3762 dbSNP
rs1192592585 3766 dbSNP
rs1476730071 3769 dbSNP
rs1223091316 3770 dbSNP
rs1270903562 3770 dbSNP
rs979493926 3774 dbSNP
rs1398137696 3776 dbSNP
rs1287117590 3780 dbSNP
rs1197103887 3787 dbSNP
rs1339576855 3788 dbSNP
rs1277196914 3790 dbSNP
rs760081420 3793 dbSNP
rs373983505 3802 dbSNP
rs1347817131 3807 dbSNP
rs1284374456 3811 dbSNP
rs529430793 3820 dbSNP
rs370974448 3821 dbSNP
rs1329921877 3823 dbSNP
rs561622775 3830 dbSNP
rs965106504 3839 dbSNP
rs1410612304 3842 dbSNP
rs991712825 3844 dbSNP
rs114192675 3846 dbSNP
rs1471099428 3846 dbSNP
rs563968621 3848 dbSNP
rs531193903 3850 dbSNP
rs921529335 3851 dbSNP
rs932779083 3852 dbSNP
rs1183274485 3856 dbSNP
rs34917793 3866 dbSNP
rs1437928302 3873 dbSNP
rs1256987581 3890 dbSNP
rs746226794 3904 dbSNP
rs570479494 3921 dbSNP
rs1325307837 3922 dbSNP
rs1264132789 3932 dbSNP
rs1333665009 3933 dbSNP
rs909946848 3934 dbSNP
rs76927623 3938 dbSNP
rs79380325 3939 dbSNP
rs940090313 3941 dbSNP
rs1281800101 3953 dbSNP
rs1218817942 3955 dbSNP
rs1442966678 3959 dbSNP
rs1376206442 3967 dbSNP
rs1329445443 3972 dbSNP
rs181480564 3989 dbSNP
rs906522615 3990 dbSNP
rs1435500577 3991 dbSNP
rs1413711577 3992 dbSNP
rs748451771 3993 dbSNP
rs1422918159 3997 dbSNP
rs1055977 3998 dbSNP
rs1203816270 3999 dbSNP
rs1160261244 4000 dbSNP
rs930774935 4001 dbSNP
rs11529 4010 dbSNP
rs1237010238 4013 dbSNP
rs187010070 4016 dbSNP
rs889100677 4019 dbSNP
rs939408140 4022 dbSNP
rs1484142383 4032 dbSNP
rs1057399784 4038 dbSNP
rs1007521217 4040 dbSNP
rs1441076543 4045 dbSNP
rs1286826374 4046 dbSNP
rs570003166 4055 dbSNP
rs1012729883 4063 dbSNP
rs938031364 4077 dbSNP
rs1478286037 4078 dbSNP
rs1248269351 4080 dbSNP
rs1021447326 4081 dbSNP
rs76692003 4081 dbSNP
rs1156235152 4082 dbSNP
rs1289065485 4082 dbSNP
rs1320101893 4082 dbSNP
rs1379693263 4082 dbSNP
rs1414013554 4082 dbSNP
rs756241303 4082 dbSNP
rs77763496 4082 dbSNP
rs904384360 4082 dbSNP
rs77423714 4083 dbSNP
rs1482098268 4089 dbSNP
rs1244177643 4098 dbSNP
rs1409445786 4098 dbSNP
rs1177493760 4099 dbSNP
rs1054165229 4100 dbSNP
rs1031458899 4106 dbSNP
rs893911377 4106 dbSNP
rs965375458 4106 dbSNP
rs535635911 4111 dbSNP
rs1312686148 4112 dbSNP
rs1226801514 4115 dbSNP
rs1341465172 4116 dbSNP
rs921616714 4120 dbSNP
rs954338759 4121 dbSNP
rs1359762149 4127 dbSNP
rs141284381 4130 dbSNP
rs1349929331 4131 dbSNP
rs1163527377 4137 dbSNP
rs1336950986 4145 dbSNP
rs555584971 4147 dbSNP
rs1040226534 4160 dbSNP
rs565995104 4161 dbSNP
rs1194764239 4162 dbSNP
rs1477711531 4164 dbSNP
rs1261604038 4165 dbSNP
rs901805732 4166 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' agggcccuUGAGUAGUCAGAGg 5'
                  || :: ||||||| 
Target 5' --------ACAUGGCAGUCUCc 3'
1 - 14
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000370035.3 | 3UTR | ACAUGGCAGUCUCCAGGCACUGUGCCACUGUGUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
108 hsa-miR-873-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT081178 MIDN midnolin 2 4
MIRT109809 ZFX zinc finger protein, X-linked 2 4
MIRT242383 TMC5 transmembrane channel like 5 2 4
MIRT444003 METRN meteorin, glial cell differentiation regulator 2 4
MIRT444097 SEPHS1 selenophosphate synthetase 1 2 2
MIRT446158 RPL12 ribosomal protein L12 2 2
MIRT446859 SAMD9L sterile alpha motif domain containing 9 like 2 2
MIRT447275 FZD5 frizzled class receptor 5 2 2
MIRT447391 TMPRSS15 transmembrane protease, serine 15 2 2
MIRT448817 FKBP1A FK506 binding protein 1A 2 4
MIRT450582 HIST1H2BG histone cluster 1 H2B family member g 2 2
MIRT451776 USP36 ubiquitin specific peptidase 36 2 2
MIRT457961 ABCC5 ATP binding cassette subfamily C member 5 2 4
MIRT458424 KLHL38 kelch like family member 38 2 4
MIRT461383 SLFN12L schlafen family member 12 like 2 2
MIRT467793 SLC2A14 solute carrier family 2 member 14 2 2
MIRT476517 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT480290 C7orf73 short transmembrane mitochondrial protein 1 2 4
MIRT482745 HES7 hes family bHLH transcription factor 7 2 10
MIRT483189 HIST1H2AH histone cluster 1 H2A family member h 2 6
MIRT486545 DCTN4 dynactin subunit 4 2 2
MIRT486581 ZNF619 zinc finger protein 619 2 2
MIRT492604 POLR3E RNA polymerase III subunit E 2 2
MIRT494130 DCAF7 DDB1 and CUL4 associated factor 7 2 6
MIRT496023 ZBED3 zinc finger BED-type containing 3 2 2
MIRT497121 NBEAL1 neurobeachin like 1 2 2
MIRT497400 TMEM245 transmembrane protein 245 2 2
MIRT501410 RANBP10 RAN binding protein 10 2 2
MIRT510947 PPTC7 PTC7 protein phosphatase homolog 2 6
MIRT512494 ARID2 AT-rich interaction domain 2 2 2
MIRT512595 ZNF783 zinc finger family member 783 2 2
MIRT512612 CNTN4 contactin 4 2 2
MIRT517808 UGDH UDP-glucose 6-dehydrogenase 2 6
MIRT520686 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT526179 HEPH hephaestin 2 2
MIRT532568 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT533979 TADA2A transcriptional adaptor 2A 2 2
MIRT538622 CCSER2 coiled-coil serine rich protein 2 2 4
MIRT539703 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT539806 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT540422 FAM83F family with sequence similarity 83 member F 2 2
MIRT540506 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT540619 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT542423 ZNF331 zinc finger protein 331 2 2
MIRT542454 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT543383 CC2D2A coiled-coil and C2 domain containing 2A 2 2
MIRT544777 CSTF2T cleavage stimulation factor subunit 2 tau variant 2 4
MIRT544923 ERCC4 ERCC excision repair 4, endonuclease catalytic subunit 2 2
MIRT549768 ZNF611 zinc finger protein 611 2 4
MIRT551242 COLEC10 collectin subfamily member 10 2 2
MIRT560474 ENSA endosulfine alpha 2 2
MIRT569738 GPR173 G protein-coupled receptor 173 2 2
MIRT571297 CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 2 2
MIRT572345 CKAP2L cytoskeleton associated protein 2 like 2 2
MIRT573112 ERBB2IP erbb2 interacting protein 2 2
MIRT607744 ANGPT4 angiopoietin 4 2 2
MIRT607903 SPRYD4 SPRY domain containing 4 2 2
MIRT611744 SERPING1 serpin family G member 1 2 4
MIRT615101 BNC2 basonuclin 2 2 2
MIRT619124 CD40LG CD40 ligand 2 2
MIRT625572 ANKRD42 ankyrin repeat domain 42 2 2
MIRT629038 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633986 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635675 COX18 COX18, cytochrome c oxidase assembly factor 2 4
MIRT637471 DEFB105B defensin beta 105B 2 4
MIRT637503 DEFB105A defensin beta 105A 2 4
MIRT639735 MAP2K2 mitogen-activated protein kinase kinase 2 2 2
MIRT640730 C9orf64 chromosome 9 open reading frame 64 2 2
MIRT645364 C9orf47 chromosome 9 open reading frame 47 2 2
MIRT647938 RNF152 ring finger protein 152 2 2
MIRT649400 SH2D4A SH2 domain containing 4A 2 2
MIRT656860 KIN Kin17 DNA and RNA binding protein 2 2
MIRT663470 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT663507 NKAPL NFKB activating protein like 2 4
MIRT667690 KNSTRN kinetochore localized astrin/SPAG5 binding protein 2 2
MIRT677403 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT678682 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT678789 NUPL2 nucleoporin like 2 2 2
MIRT680649 KIAA1456 KIAA1456 2 2
MIRT682450 MTX3 metaxin 3 2 2
MIRT682740 CA6 carbonic anhydrase 6 2 2
MIRT684421 TUFT1 tuftelin 1 2 2
MIRT690535 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT690595 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690771 PLA2G2C phospholipase A2 group IIC 2 2
MIRT692233 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693667 MXRA7 matrix remodeling associated 7 2 2
MIRT695551 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT695870 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT696214 LYZ lysozyme 2 2
MIRT698368 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT700795 PHTF2 putative homeodomain transcription factor 2 2 2
MIRT701640 MYLK3 myosin light chain kinase 3 2 2
MIRT702989 HERPUD2 HERPUD family member 2 2 2
MIRT703627 FBXL3 F-box and leucine rich repeat protein 3 2 2
MIRT703783 FAM102B family with sequence similarity 102 member B 2 2
MIRT704293 DDX19B DEAD-box helicase 19B 2 2
MIRT704828 CDC73 cell division cycle 73 2 2
MIRT705014 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT708480 OLR1 oxidized low density lipoprotein receptor 1 2 2
MIRT710770 PHF7 PHD finger protein 7 2 2
MIRT718918 TRIM66 tripartite motif containing 66 2 2
MIRT720390 ZNF549 zinc finger protein 549 2 2
MIRT720593 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT723515 SIGLEC8 sialic acid binding Ig like lectin 8 2 2
MIRT724458 PRKX protein kinase, X-linked 2 2
MIRT737267 UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 3 0
MIRT737356 ZIC2 Zic family member 2 4 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-873 Dexamethasone approved 5743 Microarray adrenals and granulosa cells 24205079 2014 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-873 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-873 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-mir-873 Cisplatin 5460033 NSC119875 approved resistant cell line (OE19)
hsa-mir-873 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-873 Decitabine 451668 approved sensitive tissue (esopheageal cancer)
hsa-miR-873-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-873-3p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780)
hsa-miR-873-3p Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-873-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-873-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-873-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-873-3p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-miR-873-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-873-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-873-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-873-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-873-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-873-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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