pre-miRNA Information
pre-miRNA hsa-mir-4433a   
Genomic Coordinates chr2: 64340759 - 64340839
Description Homo sapiens miR-4433a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4433a-3p
Sequence 51| ACAGGAGUGGGGGUGGGACAU |71
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs751480515 9 dbSNP
rs557760377 15 dbSNP
rs1479580865 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CTSS   
Synonyms -
Description cathepsin S
Transcript NM_004079   
Expression
Putative miRNA Targets on CTSS
3'UTR of CTSS
(miRNA target sites are highlighted)
>CTSS|NM_004079|3'UTR
   1 AGGATCTCTCCTTTTTATAACAAATCAAGAAATATGAAGCACTTTCTCTTAACTTAATTTTTCCTGCTGTATCCAGAAGA
  81 AATAATTGTGTCATGATTAATGTGTATTTACTGTACTAATTAGAAAATATAGTTTGAGGCCGGGCACGGTGGCTCACGCC
 161 TGTAATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGGCTAACATGGT
 241 GAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGAGCACGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGC
 321 TGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTCCAGCCTGGATGA
 401 CAGAGTGGAGACTCTGTTTCAAAAAAACAGAAAAGAAAATATAGTTTGATTCTTCATTTTTTTAAATTTGCAAATCTCAG
 481 GATAAAGTTTGCTAAGTAAATTAGTAATGTACTATAGATATAACTGTACAAAAATTGTTCAACCTAAAACAATCTGTAAT
 561 TGCTTATTGTTTTATTGTATACTCTTTGTCTTTTTAAGACCCCTAATAGCCTTTTGTAACTTGATGGCTTAAAAATACTT
 641 AATAAATCTGCCATTTCAAATTTCTATCATTGCCACATACCATTCTTATTCCTAGGCAACTATTAATAATCTATCCTGAG
 721 AATATTAATTGTGGTATTCTGGTGATGGGGTTTAGCAACTTTGATGGAAGAAAATATTAGGCTATAAATGTCCTAAGGAC
 801 TCAGATTGTATCTTTGTACAGAAGAGGATTCAAAACGCCACGTGTAGTGGCTCATGCCTGTAATCCCAACACTTTGGGAG
 881 GCTGAAGTAGGAGGATCGTCTTGAGCCCAGGAGTTCAAGACCAGCCTGGACAACATAGTGAGACCTTGTCTCCACAAAAA
 961 TAAAAAAGAAACTATCCAGGAGTGGTGGTGTGTGCCTGTGGTCCCTGCTATGCAGATGTCTAAGACAGGAGGATCACAAG
1041 AGCCCAGGAGGTTGAGAATGCAGTGAGCTTGTAATTGCACCACTGCACTCCAGCCTGGGTGACAGAGCAAGACCCTGTCT
1121 TAAAAAAAGAGGATTCAACACATATTTTTATATTATGTTAAAGTAAAGAAATGCATAAAAGACAAGCACTTTGGAAGAAT
1201 TATTTTAATGATCAACAATTTAATGTATTAGTCCAAATTATTTTTACGTAGTCATCAACAATTTGACCAGGGCCTTTATT
1281 TGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACTCCACTGCTCATATTTTTATCTAATTCAGATGGATCTTCC
1361 TTACAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTTTTTAAGTTCATGTCTATGACATG
1441 AACAATGTGTGGGATAATGTCATTAATATATCCTAAATTAACCTAAACGTATTTCACTAACTCTGGCTCCTTCTCCATAA
1521 AGCACATTTTAAGGAACAAGAATTGCTAAATATAAAAACATAAATAATACCATAATACATGGCTATCATCAAAAGTGTAT
1601 AGAATATTATAGTTTAAAAGTATTTAGTTGATTACTTTTCAGTTTTGTTTTGTTTTTTGAGACGGAGTCTCACTCTGTTG
1681 CCCAGGCTGGAGTGCAGTGGCACCATCTCAGTTCACTGCAACTTCTGCCTCCCGAGTTCAAGCGATTCTCCTGCCTCAGC
1761 CTCCCGAGTAGCTGGAATTATAGGCGTGCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAAAGACAGGGTTTTGCC
1841 ACATTAGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCACCCCAGCCTCCCAAAGTGCTAAGATTACAGGC
1921 GTGAGCCACTGAGCCCAGCCTACTTTTCAGTTTTTAACATAATTTTTGTTTTATCCACAACTTTTCAAGTATTGAAAGTA
2001 GAATAAAAACATGGGTTCTTAGTCTTTAGCTATCTGTTAAAGCCTATGAATGCCTTCTTAAAATCATGTTTTTAAATGCA
2081 TAAAATATATAGGATTACAAAGGAATCTAATTATATCGAAATACAGTTATTAAAATGTTAAAAGATAAGTTTGTTATATA
2161 TTAATATGCATGCTTCTTTATAAATGCATTAAATAAGAGTTAATAGCTATCCTAAATTTGAAATAGTGATAAGCATAATG
2241 AAAATAGATGCAAAAAACTAATGTGATATGAAAATATCTGGGTTTTTCTTTTGATGATGAAGTATTGCTAATATTACCGT
2321 GGTTTATGAACTATGTTCAGAATTGAAGAAAATCCTAACTTTCAGTTAGAGGTTAGTGACGGGGTTCAGGACACCCTACA
2401 CAAAATACAGCACTTTGACATATTGAATATTTTAAGCTGAAGGCATTTGAGGAAATTGCAGAAGCAGGAAGGTGACTCTG
2481 ACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGAAGGATTTTCTGACCTTCCCCTGAAGTAGATCATA
2561 AGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACCTCCAAAAGCACAGGGACACAAAGA
2641 GGAATCTAAACAAACAGGCCTCTCAGTTTCCCCCAGTTTATTACATTTAGCTTGTTCACACTTTGCCCTATGACATTTCT
2721 ACATCACTGGCTGCTCTTCATCAAACCTACTATAAAAAACATTCAAGTTCAACTGTTTCTTTGGGCCTTTATTTCCTTAT
2801 GGAGCCCCTCGTGTCGTGTAAAACTTATATTAAATAAATGTGCATGCTTT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uaCAGGGUGGGGGUGAGGACa 5'
            |||:||     ||||||| 
Target 5' tgGTCTCA----AACTCCTGa 3'
1854 - 1870 149.00 -18.20
2
miRNA  3' uaCAGGGUGGGGGUGAGGACa 5'
            || :|||: | |||:||| 
Target 5' caGT-TCACTGCAACTTCTGc 3'
1709 - 1728 142.00 -15.70
3
miRNA  3' uacAGGGUGGGGGUGAGGAca 5'
             | |||::|::|:||||  
Target 5' acaTACCATTCTTATTCCTag 3'
675 - 695 130.00 -18.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN7177087 6 COSMIC
COSN32053224 8 COSMIC
COSN31559022 23 COSMIC
COSN8636171 39 COSMIC
COSN30142372 43 COSMIC
COSN17159065 63 COSMIC
COSN30113929 79 COSMIC
COSN30527223 105 COSMIC
COSN24386514 145 COSMIC
COSN30530492 151 COSMIC
COSN30530500 152 COSMIC
COSN30173924 198 COSMIC
COSN8642054 288 COSMIC
COSN216743 790 COSMIC
COSN23430444 898 COSMIC
COSN25296178 987 COSMIC
COSN27641907 1556 COSMIC
COSN17202225 1663 COSMIC
COSN24471030 1735 COSMIC
COSN22372625 2628 COSMIC
COSN24974100 2657 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1008343358 4 dbSNP
rs748206909 18 dbSNP
rs866627817 25 dbSNP
rs954350953 26 dbSNP
rs776601769 28 dbSNP
rs1326687333 33 dbSNP
rs768760559 34 dbSNP
rs1227195716 35 dbSNP
rs1264871061 36 dbSNP
rs1380325289 39 dbSNP
rs367582792 40 dbSNP
rs1011769905 42 dbSNP
rs1163837043 49 dbSNP
rs1313626928 57 dbSNP
rs1286094287 58 dbSNP
rs887762178 62 dbSNP
rs1482148716 64 dbSNP
rs587745951 65 dbSNP
rs1027652433 67 dbSNP
rs1252376013 77 dbSNP
rs1226286355 86 dbSNP
rs1181497409 94 dbSNP
rs893401798 97 dbSNP
rs111323510 100 dbSNP
rs1435192436 108 dbSNP
rs993465708 108 dbSNP
rs186997930 110 dbSNP
rs56210936 111 dbSNP
rs113776715 114 dbSNP
rs1406286086 115 dbSNP
rs756789016 116 dbSNP
rs587687300 123 dbSNP
rs1292389006 129 dbSNP
rs1457871579 130 dbSNP
rs587636359 141 dbSNP
rs751018651 142 dbSNP
rs1300080173 144 dbSNP
rs1310231473 145 dbSNP
rs1161839781 147 dbSNP
rs1141835 148 dbSNP
rs1341416646 157 dbSNP
rs181875038 157 dbSNP
rs758325433 158 dbSNP
rs1489467479 159 dbSNP
rs752499667 161 dbSNP
rs1044983034 179 dbSNP
rs1453003463 182 dbSNP
rs1190956080 185 dbSNP
rs1391143804 193 dbSNP
rs1429732650 197 dbSNP
rs1167254114 209 dbSNP
rs1351117874 223 dbSNP
rs946654073 231 dbSNP
rs931197222 241 dbSNP
rs3208233 244 dbSNP
rs1365001027 245 dbSNP
rs1436787632 249 dbSNP
rs587683802 256 dbSNP
rs914901212 257 dbSNP
rs1364191064 262 dbSNP
rs1226092597 267 dbSNP
rs1291866532 275 dbSNP
rs919846312 277 dbSNP
rs972697687 278 dbSNP
rs934996463 281 dbSNP
rs961666023 283 dbSNP
rs1190622163 284 dbSNP
rs912601643 290 dbSNP
rs1449168822 296 dbSNP
rs375417744 298 dbSNP
rs11542002 306 dbSNP
rs1416526706 312 dbSNP
rs954182618 315 dbSNP
rs1028418200 322 dbSNP
rs1423921230 324 dbSNP
rs1011717723 328 dbSNP
rs976923309 329 dbSNP
rs1458551218 335 dbSNP
rs957578918 343 dbSNP
rs112354597 352 dbSNP
rs1387654157 359 dbSNP
rs1432574552 364 dbSNP
rs966225224 364 dbSNP
rs370630584 369 dbSNP
rs1227654650 370 dbSNP
rs1312166920 372 dbSNP
rs587753888 390 dbSNP
rs999156420 392 dbSNP
rs1243765700 395 dbSNP
rs1210822382 396 dbSNP
rs188466780 399 dbSNP
rs1464745377 401 dbSNP
rs1046093764 410 dbSNP
rs1328189220 412 dbSNP
rs1013725330 418 dbSNP
rs986344811 430 dbSNP
rs587611707 431 dbSNP
rs55667933 442 dbSNP
rs1027863797 445 dbSNP
rs1473253836 455 dbSNP
rs1054928667 464 dbSNP
rs1410722223 484 dbSNP
rs1398566080 485 dbSNP
rs993435944 501 dbSNP
rs897833491 514 dbSNP
rs1447284331 517 dbSNP
rs1310036658 518 dbSNP
rs1299994804 519 dbSNP
rs1230246957 525 dbSNP
rs1289251508 529 dbSNP
rs587657761 529 dbSNP
rs1222255586 535 dbSNP
rs1035094963 550 dbSNP
rs931143930 555 dbSNP
rs777083427 562 dbSNP
rs919794121 568 dbSNP
rs1036945892 580 dbSNP
rs1363342685 581 dbSNP
rs1217647662 584 dbSNP
rs1250399801 588 dbSNP
rs377667408 588 dbSNP
rs905020986 594 dbSNP
rs912539175 600 dbSNP
rs1044951961 605 dbSNP
rs1314822072 641 dbSNP
rs1171707165 651 dbSNP
rs946541445 662 dbSNP
rs587632006 666 dbSNP
rs587756062 668 dbSNP
rs932703826 678 dbSNP
rs934986336 682 dbSNP
rs1276772016 696 dbSNP
rs921350280 698 dbSNP
rs922290114 699 dbSNP
rs1278597285 702 dbSNP
rs990243782 710 dbSNP
rs1206486777 711 dbSNP
rs1345003563 711 dbSNP
rs148406315 729 dbSNP
rs1435496171 731 dbSNP
rs147370389 744 dbSNP
rs1246875686 749 dbSNP
rs1191555803 761 dbSNP
rs1376078401 768 dbSNP
rs978064390 770 dbSNP
rs879260826 775 dbSNP
rs1391758729 776 dbSNP
rs1175526563 777 dbSNP
rs879874348 796 dbSNP
rs1430394430 798 dbSNP
rs971686792 804 dbSNP
rs1395881274 806 dbSNP
rs1025039460 813 dbSNP
rs1325814307 818 dbSNP
rs910713827 819 dbSNP
rs750681321 820 dbSNP
rs56409713 836 dbSNP
rs894865718 837 dbSNP
rs142768900 841 dbSNP
rs1033423290 842 dbSNP
rs1270063617 847 dbSNP
rs1336904041 857 dbSNP
rs1211065040 858 dbSNP
rs995292191 860 dbSNP
rs1289931981 861 dbSNP
rs1450730608 861 dbSNP
rs1211422458 868 dbSNP
rs898311674 869 dbSNP
rs1464350530 876 dbSNP
rs1234480797 877 dbSNP
rs1243563068 881 dbSNP
rs1036894392 888 dbSNP
rs939902184 897 dbSNP
rs1201900400 898 dbSNP
rs1165126590 902 dbSNP
rs1391530832 903 dbSNP
rs891062794 924 dbSNP
rs1349435538 927 dbSNP
rs962049608 943 dbSNP
rs762423182 944 dbSNP
rs1051496520 947 dbSNP
rs1436206077 952 dbSNP
rs184119191 956 dbSNP
rs1035469254 961 dbSNP
rs1003621123 962 dbSNP
rs1284336747 977 dbSNP
rs1333517917 983 dbSNP
rs200492700 989 dbSNP
rs932676938 998 dbSNP
rs1231078937 1000 dbSNP
rs1269575796 1001 dbSNP
rs921298021 1011 dbSNP
rs1255036651 1014 dbSNP
rs969842176 1016 dbSNP
rs1023730217 1025 dbSNP
rs1308711943 1032 dbSNP
rs1259374528 1039 dbSNP
rs1300505729 1043 dbSNP
rs1010722945 1061 dbSNP
rs754588252 1063 dbSNP
rs1226863985 1064 dbSNP
rs1474890282 1066 dbSNP
rs1163075507 1071 dbSNP
rs1414411049 1078 dbSNP
rs587593563 1079 dbSNP
rs1365048595 1084 dbSNP
rs990175292 1085 dbSNP
rs587715058 1087 dbSNP
rs765507188 1092 dbSNP
rs1398374278 1098 dbSNP
rs1335363651 1099 dbSNP
rs1398146044 1103 dbSNP
rs1354295255 1107 dbSNP
rs1052341770 1109 dbSNP
rs1412339124 1113 dbSNP
rs1289649946 1117 dbSNP
rs1363236863 1118 dbSNP
rs56291655 1123 dbSNP
rs1329493536 1126 dbSNP
rs1237865269 1129 dbSNP
rs1258817075 1129 dbSNP
rs1400421244 1129 dbSNP
rs1200981360 1131 dbSNP
rs1302456982 1131 dbSNP
rs1462604315 1142 dbSNP
rs1372514235 1151 dbSNP
rs999873746 1171 dbSNP
rs900835120 1173 dbSNP
rs936117163 1176 dbSNP
rs1448797715 1181 dbSNP
rs924755038 1183 dbSNP
rs1158648264 1188 dbSNP
rs1385722781 1194 dbSNP
rs977637028 1197 dbSNP
rs1173706231 1200 dbSNP
rs1375415423 1218 dbSNP
rs942382213 1222 dbSNP
rs587631072 1227 dbSNP
rs972019132 1231 dbSNP
rs767807873 1245 dbSNP
rs992187721 1246 dbSNP
rs959027235 1247 dbSNP
rs1048145015 1248 dbSNP
rs1255094498 1256 dbSNP
rs1233646584 1270 dbSNP
rs930800054 1286 dbSNP
rs1033367430 1292 dbSNP
rs1207194680 1294 dbSNP
rs55954760 1307 dbSNP
rs1480962139 1314 dbSNP
rs898259493 1316 dbSNP
rs1015818245 1324 dbSNP
rs180727719 1325 dbSNP
rs962640698 1330 dbSNP
rs928243697 1348 dbSNP
rs982483143 1353 dbSNP
rs1394846881 1372 dbSNP
rs1433480182 1374 dbSNP
rs1004051340 1376 dbSNP
rs774554841 1381 dbSNP
rs1170960881 1383 dbSNP
rs188250233 1388 dbSNP
rs1461004245 1402 dbSNP
rs1296120265 1413 dbSNP
rs1392476883 1415 dbSNP
rs1203726173 1418 dbSNP
rs1302479282 1424 dbSNP
rs1368508217 1430 dbSNP
rs1342150034 1443 dbSNP
rs1285300826 1451 dbSNP
rs1298171361 1462 dbSNP
rs1308176154 1482 dbSNP
rs1051013850 1483 dbSNP
rs1247500450 1484 dbSNP
rs1249666986 1487 dbSNP
rs1489623077 1488 dbSNP
rs764553593 1489 dbSNP
rs763514753 1499 dbSNP
rs1252772402 1518 dbSNP
rs1023697517 1519 dbSNP
rs1191083643 1524 dbSNP
rs1011024091 1525 dbSNP
rs957841801 1527 dbSNP
rs1167760887 1560 dbSNP
rs1312396124 1569 dbSNP
rs1031294162 1573 dbSNP
rs999443795 1580 dbSNP
rs1392035631 1583 dbSNP
rs1436946920 1606 dbSNP
rs1320944723 1611 dbSNP
rs1306277957 1621 dbSNP
rs901052838 1627 dbSNP
rs932594401 1636 dbSNP
rs899830507 1645 dbSNP
rs1323512341 1646 dbSNP
rs1234149236 1653 dbSNP
rs587755816 1656 dbSNP
rs1366187510 1657 dbSNP
rs1006937439 1663 dbSNP
rs587698231 1664 dbSNP
rs1048111395 1672 dbSNP
rs1243030449 1677 dbSNP
rs1485858584 1684 dbSNP
rs931103734 1685 dbSNP
rs1415336596 1699 dbSNP
rs899332365 1707 dbSNP
rs936063103 1717 dbSNP
rs1367697829 1719 dbSNP
rs924721108 1726 dbSNP
rs1042242554 1728 dbSNP
rs1159641143 1731 dbSNP
rs777057876 1733 dbSNP
rs1428559091 1734 dbSNP
rs56091952 1735 dbSNP
rs1442453461 1736 dbSNP
rs768339836 1743 dbSNP
rs1415436152 1744 dbSNP
rs1473369772 1752 dbSNP
rs917442680 1757 dbSNP
rs587619777 1765 dbSNP
rs587762864 1766 dbSNP
rs928183573 1781 dbSNP
rs185378844 1784 dbSNP
rs958973893 1785 dbSNP
rs587626722 1786 dbSNP
rs1239674198 1797 dbSNP
rs926249787 1815 dbSNP
rs973754436 1816 dbSNP
rs1254758779 1831 dbSNP
rs948023126 1832 dbSNP
rs1177360168 1837 dbSNP
rs1265233228 1838 dbSNP
rs1398692835 1842 dbSNP
rs587756410 1856 dbSNP
rs962415948 1857 dbSNP
rs1178182632 1862 dbSNP
rs1376041294 1865 dbSNP
rs587700887 1866 dbSNP
rs1015351647 1872 dbSNP
rs1004404932 1878 dbSNP
rs1312409919 1881 dbSNP
rs1286673888 1885 dbSNP
rs955232273 1890 dbSNP
rs1280299815 1901 dbSNP
rs1373084183 1902 dbSNP
rs1029938559 1917 dbSNP
rs996689690 1918 dbSNP
rs899777980 1920 dbSNP
rs1054343351 1921 dbSNP
rs1210792521 1930 dbSNP
rs1385038925 1931 dbSNP
rs1483715913 1935 dbSNP
rs1182105389 1939 dbSNP
rs1231910778 1947 dbSNP
rs1468251751 1950 dbSNP
rs1192750631 1963 dbSNP
rs35549166 1973 dbSNP
rs903215168 1976 dbSNP
rs1458615359 1983 dbSNP
rs1409363897 1984 dbSNP
rs1411684179 1989 dbSNP
rs1041799554 1993 dbSNP
rs1354207711 2014 dbSNP
rs950200536 2017 dbSNP
rs1306175347 2020 dbSNP
rs1031093717 2022 dbSNP
rs978304637 2027 dbSNP
rs762465165 2035 dbSNP
rs374227676 2038 dbSNP
rs1195909838 2042 dbSNP
rs1271649991 2045 dbSNP
rs1006783090 2047 dbSNP
rs1055987846 2065 dbSNP
rs1196052408 2067 dbSNP
rs1253402237 2068 dbSNP
rs937554815 2077 dbSNP
rs1450410408 2078 dbSNP
rs1475683155 2090 dbSNP
rs1168618200 2092 dbSNP
rs770545477 2102 dbSNP
rs1418887044 2112 dbSNP
rs193263209 2117 dbSNP
rs896870254 2118 dbSNP
rs1440574079 2122 dbSNP
rs1324261396 2124 dbSNP
rs199546192 2126 dbSNP
rs962364312 2127 dbSNP
rs1036802412 2133 dbSNP
rs1269151779 2136 dbSNP
rs940826598 2138 dbSNP
rs1234766660 2139 dbSNP
rs1273375138 2143 dbSNP
rs1266520874 2144 dbSNP
rs1228035029 2145 dbSNP
rs1211631976 2149 dbSNP
rs1249640300 2151 dbSNP
rs202161705 2152 dbSNP
rs1447580126 2153 dbSNP
rs906731743 2154 dbSNP
rs3975894 2156 dbSNP
rs56303945 2156 dbSNP
rs781206057 2156 dbSNP
rs908244657 2156 dbSNP
rs55999253 2158 dbSNP
rs1276694130 2163 dbSNP
rs1418896860 2164 dbSNP
rs188941304 2166 dbSNP
rs587594366 2167 dbSNP
rs1321106463 2169 dbSNP
rs1029473515 2170 dbSNP
rs1318185132 2171 dbSNP
rs936660219 2173 dbSNP
rs923990794 2179 dbSNP
rs1293336726 2184 dbSNP
rs996637197 2187 dbSNP
rs1386212411 2188 dbSNP
rs1262275288 2200 dbSNP
rs1351055120 2203 dbSNP
rs1319602171 2204 dbSNP
rs1470002831 2208 dbSNP
rs1204500956 2226 dbSNP
rs1282013214 2226 dbSNP
rs963893750 2229 dbSNP
rs74743630 2231 dbSNP
rs777332995 2242 dbSNP
rs1190209011 2245 dbSNP
rs1258295301 2251 dbSNP
rs1000106333 2264 dbSNP
rs1475039639 2271 dbSNP
rs1170359610 2272 dbSNP
rs1185999982 2275 dbSNP
rs1365931723 2294 dbSNP
rs1477404762 2300 dbSNP
rs903163660 2308 dbSNP
rs587662531 2319 dbSNP
rs1019480437 2334 dbSNP
rs985335843 2335 dbSNP
rs1313018574 2352 dbSNP
rs953929619 2353 dbSNP
rs1412552519 2361 dbSNP
rs587608073 2365 dbSNP
rs1189747117 2366 dbSNP
rs1466598233 2367 dbSNP
rs866567397 2375 dbSNP
rs895908584 2381 dbSNP
rs1055935209 2384 dbSNP
rs995109718 2394 dbSNP
rs1485354525 2401 dbSNP
rs937502333 2406 dbSNP
rs750134883 2407 dbSNP
rs1037955833 2408 dbSNP
rs1002650149 2416 dbSNP
rs940963906 2417 dbSNP
rs1181605721 2419 dbSNP
rs908173756 2423 dbSNP
rs1362409103 2424 dbSNP
rs982873671 2426 dbSNP
rs933714884 2429 dbSNP
rs922363260 2443 dbSNP
rs1344373451 2455 dbSNP
rs1432278296 2467 dbSNP
rs1299352976 2473 dbSNP
rs906691478 2475 dbSNP
rs1390446343 2483 dbSNP
rs200902062 2485 dbSNP
rs371407351 2486 dbSNP
rs199939634 2487 dbSNP
rs55960943 2488 dbSNP
rs56363548 2488 dbSNP
rs766655477 2488 dbSNP
rs1234950980 2490 dbSNP
rs895363097 2495 dbSNP
rs1054060128 2502 dbSNP
rs1296619860 2514 dbSNP
rs587653071 2524 dbSNP
rs1231214974 2535 dbSNP
rs963841416 2537 dbSNP
rs1253129802 2539 dbSNP
rs1481116592 2545 dbSNP
rs936640730 2566 dbSNP
rs1032827901 2569 dbSNP
rs748874096 2570 dbSNP
rs1448468721 2571 dbSNP
rs587699541 2574 dbSNP
rs978634278 2577 dbSNP
rs371014245 2578 dbSNP
rs587721154 2583 dbSNP
rs587637029 2587 dbSNP
rs367838257 2590 dbSNP
rs1373144906 2592 dbSNP
rs1461174145 2598 dbSNP
rs895867125 2607 dbSNP
rs113003008 2610 dbSNP
rs1034426668 2639 dbSNP
rs953897362 2646 dbSNP
rs1324941072 2647 dbSNP
rs919815981 2651 dbSNP
rs1001659668 2657 dbSNP
rs1451884756 2663 dbSNP
rs899313409 2664 dbSNP
rs1216244082 2667 dbSNP
rs1388795215 2672 dbSNP
rs1188390716 2675 dbSNP
rs1037886938 2681 dbSNP
rs973990914 2686 dbSNP
rs1337181794 2690 dbSNP
rs1214760430 2691 dbSNP
rs1252744513 2693 dbSNP
rs940929000 2710 dbSNP
rs886692143 2711 dbSNP
rs1261831011 2714 dbSNP
rs1046692495 2720 dbSNP
rs587767326 2722 dbSNP
rs1168140555 2725 dbSNP
rs1419628435 2731 dbSNP
rs1239484215 2734 dbSNP
rs961316444 2736 dbSNP
rs752960817 2737 dbSNP
rs1392015323 2740 dbSNP
rs933641974 2744 dbSNP
rs1015299108 2748 dbSNP
rs56388345 2753 dbSNP
rs975112016 2760 dbSNP
rs1381761697 2763 dbSNP
rs1022726035 2767 dbSNP
rs1275454497 2767 dbSNP
rs778651001 2768 dbSNP
rs1357660652 2775 dbSNP
rs925762326 2777 dbSNP
rs979022644 2783 dbSNP
rs118104883 2786 dbSNP
rs1320228208 2796 dbSNP
rs1340041808 2798 dbSNP
rs1273825457 2799 dbSNP
rs1136808 2805 dbSNP
rs1261789546 2806 dbSNP
rs1485810581 2810 dbSNP
rs992794719 2811 dbSNP
rs1190939754 2815 dbSNP
rs960027279 2816 dbSNP
rs1054021205 2819 dbSNP
rs1034374323 2824 dbSNP
rs1411376470 2827 dbSNP
rs185277973 2828 dbSNP
rs899266025 2829 dbSNP
rs368966396 2832 dbSNP
rs1042357517 2834 dbSNP
rs944038417 2836 dbSNP
rs1377279282 2839 dbSNP
rs912624542 2839 dbSNP
rs1016401845 2840 dbSNP
rs1427243608 2842 dbSNP
rs1049812648 2846 dbSNP
rs1005469185 2851 dbSNP
rs1170335642 2852 dbSNP
rs1316906313 2854 dbSNP
rs886643546 2858 dbSNP
rs7540874 2859 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uaCAGGGUGGGGGUGAGGACa 5'
            |||:||     ||||||| 
Target 5' ugGUCUCA----AACUCCUGa 3'
11 - 27
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000368985.3 | 3UTR | UUAGCCAGGCUGGUCUCAAACUCCUGACCUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
256 hsa-miR-4433a-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT088097 SEPT2 septin 2 2 2
MIRT143134 MGRN1 mahogunin ring finger 1 2 2
MIRT153912 NCOA3 nuclear receptor coactivator 3 2 2
MIRT154894 GNAS GNAS complex locus 2 4
MIRT200996 ZNF805 zinc finger protein 805 2 2
MIRT215729 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT235593 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT263250 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT317951 CDC5L cell division cycle 5 like 2 4
MIRT325572 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT354739 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 2 2
MIRT444552 UBE2D3 ubiquitin conjugating enzyme E2 D3 2 4
MIRT446978 SUSD5 sushi domain containing 5 2 2
MIRT451036 ZNF610 zinc finger protein 610 2 2
MIRT451596 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT452025 NLRP6 NLR family pyrin domain containing 6 2 2
MIRT452594 CA6 carbonic anhydrase 6 2 2
MIRT452768 TCEA3 transcription elongation factor A3 2 4
MIRT452959 ZNF844 zinc finger protein 844 2 2
MIRT453191 ACSF2 acyl-CoA synthetase family member 2 2 2
MIRT453382 RHD Rh blood group D antigen 2 2
MIRT453685 CEBPD CCAAT/enhancer binding protein delta 2 2
MIRT455272 DDX39B DExD-box helicase 39B 2 8
MIRT455346 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT456494 SERAC1 serine active site containing 1 2 2
MIRT456585 NID1 nidogen 1 2 2
MIRT456888 DDA1 DET1 and DDB1 associated 1 2 2
MIRT457123 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT457852 ZNF324B zinc finger protein 324B 2 2
MIRT457987 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT459278 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 2
MIRT459625 SLC25A33 solute carrier family 25 member 33 2 2
MIRT459715 SGK494 uncharacterized serine/threonine-protein kinase SgK494 2 2
MIRT460057 RPL22L1 ribosomal protein L22 like 1 2 2
MIRT460182 UNK unkempt family zinc finger 2 6
MIRT460288 PDE11A phosphodiesterase 11A 2 2
MIRT460841 EGF epidermal growth factor 2 4
MIRT460860 TBC1D19 TBC1 domain family member 19 2 2
MIRT461519 EMC7 ER membrane protein complex subunit 7 2 2
MIRT461729 SLC27A1 solute carrier family 27 member 1 2 4
MIRT461821 SNAP23 synaptosome associated protein 23 2 2
MIRT462066 CCDC77 coiled-coil domain containing 77 2 4
MIRT462084 MSANTD2 Myb/SANT DNA binding domain containing 2 2 2
MIRT462508 MTFMT mitochondrial methionyl-tRNA formyltransferase 2 10
MIRT464239 VCP valosin containing protein 2 2
MIRT465316 TRAF5 TNF receptor associated factor 5 2 2
MIRT466549 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467128 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 8
MIRT468091 SHCBP1 SHC binding and spindle associated 1 2 2
MIRT469630 RAD21 RAD21 cohesin complex component 2 6
MIRT471097 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472704 MYBL1 MYB proto-oncogene like 1 2 2
MIRT472830 MTMR10 myotubularin related protein 10 2 2
MIRT472872 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT472895 MTDH metadherin 2 2
MIRT473728 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT473859 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT474047 LONRF1 LON peptidase N-terminal domain and ring finger 1 2 2
MIRT474297 LAMC1 laminin subunit gamma 1 2 2
MIRT474658 KLF13 Kruppel like factor 13 2 2
MIRT475234 IKZF3 IKAROS family zinc finger 3 2 2
MIRT475500 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT475742 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT475793 HDGF heparin binding growth factor 2 2
MIRT477254 ERGIC2 ERGIC and golgi 2 2 2
MIRT478228 DDX52 DExD-box helicase 52 2 2
MIRT478393 DCTN5 dynactin subunit 5 2 2
MIRT478754 CS citrate synthase 2 2
MIRT478827 CRKL CRK like proto-oncogene, adaptor protein 2 4
MIRT480234 C9orf41 carnosine N-methyltransferase 1 2 2
MIRT480597 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT484121 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT484689 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT486331 C11orf54 chromosome 11 open reading frame 54 2 4
MIRT488599 FAM3C family with sequence similarity 3 member C 2 8
MIRT488833 MRRF mitochondrial ribosome recycling factor 2 2
MIRT492523 RAB15 RAB15, member RAS oncogene family 2 4
MIRT493632 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT500026 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501075 SMAD7 SMAD family member 7 2 8
MIRT503094 BTG2 BTG anti-proliferation factor 2 2 4
MIRT503336 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT505465 STMN1 stathmin 1 2 4
MIRT505726 SERTAD3 SERTA domain containing 3 2 4
MIRT509333 MS4A4A membrane spanning 4-domains A4A 2 2
MIRT509978 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 4
MIRT513068 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT513446 EMP1 epithelial membrane protein 1 2 6
MIRT513736 PSD3 pleckstrin and Sec7 domain containing 3 2 4
MIRT513996 CENPQ centromere protein Q 2 4
MIRT516538 MIXL1 Mix paired-like homeobox 2 2
MIRT517606 SAV1 salvador family WW domain containing protein 1 2 2
MIRT518064 CEP89 centrosomal protein 89 2 2
MIRT518119 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT518325 WDR92 WD repeat domain 92 2 2
MIRT519048 ABCB11 ATP binding cassette subfamily B member 11 2 2
MIRT520972 SPPL2A signal peptide peptidase like 2A 2 4
MIRT521359 RPL35A ribosomal protein L35a 2 2
MIRT523359 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT523801 FAM63A MINDY lysine 48 deubiquitinase 1 2 2
MIRT524622 C7orf73 short transmembrane mitochondrial protein 1 2 2
MIRT525550 PHB2 prohibitin 2 2 4
MIRT529709 ZBTB49 zinc finger and BTB domain containing 49 2 2
MIRT531605 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT532387 UMPS uridine monophosphate synthetase 2 2
MIRT534468 SCD stearoyl-CoA desaturase 2 4
MIRT537546 ETNK1 ethanolamine kinase 1 2 2
MIRT541619 C11orf31 selenoprotein H 2 2
MIRT548380 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT549523 HDDC2 HD domain containing 2 2 2
MIRT549774 SOD2 superoxide dismutase 2 2 2
MIRT550578 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551498 CENPN centromere protein N 2 4
MIRT552301 ITGA3 integrin subunit alpha 3 2 2
MIRT555400 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT556399 LUC7L LUC7 like 2 2
MIRT557047 HOXB3 homeobox B3 2 2
MIRT558072 ERO1L endoplasmic reticulum oxidoreductase 1 alpha 1 2
MIRT559659 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT561239 ZNF354B zinc finger protein 354B 2 2
MIRT566899 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT568786 FAM120B family with sequence similarity 120B 2 2
MIRT574014 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT574885 Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 2 2
MIRT575243 Serping1 serine (or cysteine) peptidase inhibitor, clade G, member 1 2 2
MIRT576194 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576309 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576484 Lhx4 LIM homeobox protein 4 2 3
MIRT576646 Mill2 MHC I like leukocyte 2 1 1
MIRT576708 Kras Kirsten rat sarcoma viral oncogene homolog 2 2
MIRT576855 Socs6 suppressor of cytokine signaling 6 2 2
MIRT576950 Aldoa aldolase A, fructose-bisphosphate 2 2
MIRT617133 ZNF556 zinc finger protein 556 2 4
MIRT617928 ZNF783 zinc finger family member 783 2 2
MIRT618981 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT621100 SIX3 SIX homeobox 3 2 2
MIRT624537 BROX BRO1 domain and CAAX motif containing 2 2
MIRT625663 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT627059 DCTN6 dynactin subunit 6 2 2
MIRT628319 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT630859 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT632295 TMEM65 transmembrane protein 65 2 2
MIRT634115 ZNF207 zinc finger protein 207 2 2
MIRT634736 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT635655 NDST3 N-deacetylase and N-sulfotransferase 3 2 2
MIRT635772 PDCL3 phosducin like 3 2 2
MIRT635911 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT636365 OGFRL1 opioid growth factor receptor like 1 2 4
MIRT637251 GLRX2 glutaredoxin 2 2 2
MIRT638705 FZD4 frizzled class receptor 4 2 2
MIRT639640 PREX2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 2 2
MIRT639676 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT642267 SMIM17 small integral membrane protein 17 2 2
MIRT642372 ZNF581 zinc finger protein 581 2 2
MIRT643545 SLC25A17 solute carrier family 25 member 17 2 2
MIRT647994 PDE12 phosphodiesterase 12 2 2
MIRT649094 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT650993 ZNF770 zinc finger protein 770 2 2
MIRT651956 UBE2N ubiquitin conjugating enzyme E2 N 2 2
MIRT652977 SUN2 Sad1 and UNC84 domain containing 2 2 2
MIRT654389 RBM12B RNA binding motif protein 12B 2 2
MIRT655637 OLFML2A olfactomedin like 2A 2 2
MIRT655729 NRXN3 neurexin 3 2 2
MIRT658171 FCHSD1 FCH and double SH3 domains 1 2 2
MIRT660937 ACOX1 acyl-CoA oxidase 1 2 2
MIRT662112 CERKL ceramide kinase like 2 2
MIRT662302 MPV17L MPV17 mitochondrial inner membrane protein like 2 2
MIRT662993 TMEM59 transmembrane protein 59 2 2
MIRT663071 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT663704 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663864 MUC20 mucin 20, cell surface associated 2 2
MIRT665185 HAUS5 HAUS augmin like complex subunit 5 2 4
MIRT665402 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT665688 TNPO3 transportin 3 2 2
MIRT665795 TMEM170A transmembrane protein 170A 2 2
MIRT665847 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT666999 PDPN podoplanin 2 2
MIRT667598 LIPC lipase C, hepatic type 2 2
MIRT668576 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT670960 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT671187 ZNF891 zinc finger protein 891 2 2
MIRT671739 ZNF451 zinc finger protein 451 2 2
MIRT672745 ZNF585B zinc finger protein 585B 2 4
MIRT673446 ZNF583 zinc finger protein 583 2 2
MIRT679843 GPR75 G protein-coupled receptor 75 2 2
MIRT680556 ZNF584 zinc finger protein 584 2 2
MIRT680661 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT681285 RFC2 replication factor C subunit 2 2 2
MIRT683264 ZNF329 zinc finger protein 329 2 2
MIRT684519 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT685065 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685157 DTWD2 DTW domain containing 2 2 2
MIRT685168 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT685470 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT686001 NEK4 NIMA related kinase 4 2 2
MIRT687027 RNF24 ring finger protein 24 2 2
MIRT687543 MOB1B MOB kinase activator 1B 2 2
MIRT687592 MANEAL mannosidase endo-alpha like 2 2
MIRT687753 KIAA1328 KIAA1328 2 2
MIRT688050 GLUL glutamate-ammonia ligase 2 2
MIRT688374 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 2 2
MIRT688802 CBFA2T3 CBFA2/RUNX1 translocation partner 3 2 2
MIRT688957 ATXN3 ataxin 3 2 2
MIRT689281 C5AR2 complement component 5a receptor 2 2 2
MIRT689988 NNMT nicotinamide N-methyltransferase 2 2
MIRT689997 MMP17 matrix metallopeptidase 17 2 2
MIRT690014 LUZP2 leucine zipper protein 2 2 2
MIRT690161 ELP3 elongator acetyltransferase complex subunit 3 2 2
MIRT690379 ZSWIM7 zinc finger SWIM-type containing 7 2 2
MIRT690563 MICA MHC class I polypeptide-related sequence A 2 2
MIRT691891 EVC EvC ciliary complex subunit 1 2 2
MIRT693107 SCNM1 sodium channel modifier 1 2 2
MIRT693832 ZFP64 ZFP64 zinc finger protein 2 2
MIRT694105 ZNF446 zinc finger protein 446 2 2
MIRT694179 ZNF486 zinc finger protein 486 2 2
MIRT694475 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT694998 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 2 2
MIRT695031 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT695163 TCTN2 tectonic family member 2 2 2
MIRT695525 SLC25A34 solute carrier family 25 member 34 2 2
MIRT696067 ZNF264 zinc finger protein 264 2 2
MIRT696616 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT696661 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696705 PNPO pyridoxamine 5'-phosphate oxidase 2 2
MIRT697173 INMT indolethylamine N-methyltransferase 2 2
MIRT697303 ZNF652 zinc finger protein 652 2 2
MIRT697491 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT698657 TERF2 telomeric repeat binding factor 2 2 2
MIRT699042 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699185 SLX4IP SLX4 interacting protein 2 2
MIRT699598 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT700150 RNF115 ring finger protein 115 2 2
MIRT700720 PNO1 partner of NOB1 homolog 2 2
MIRT700870 PER2 period circadian clock 2 2 2
MIRT700912 PDXK pyridoxal kinase 2 2
MIRT701095 PAPOLG poly(A) polymerase gamma 2 2
MIRT701194 OTUD3 OTU deubiquitinase 3 2 2
MIRT702203 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT702272 LHX4 LIM homeobox 4 2 3
MIRT703125 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT703252 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT703262 GNL3L G protein nucleolar 3 like 2 2
MIRT703440 FYTTD1 forty-two-three domain containing 1 2 2
MIRT704321 DCUN1D5 defective in cullin neddylation 1 domain containing 5 2 2
MIRT704393 CTSS cathepsin S 2 2
MIRT704483 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT704880 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT704926 CCDC36 coiled-coil domain containing 36 2 2
MIRT705175 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT706561 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT707048 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT711497 PGD phosphogluconate dehydrogenase 2 2
MIRT716644 EPGN epithelial mitogen 2 2
MIRT720083 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT722288 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT725468 GRAP2 GRB2-related adaptor protein 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4433a Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-4433a Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-mir-4433a Vincristine 5978 approved resistant cell line (W1)
hsa-mir-4433a Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4433a-3p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Pancreatic Cancer cell line (BxPC-3)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (mitochondrial RNA)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-4433a-3p Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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