pre-miRNA Information
pre-miRNA hsa-mir-4433a   
Genomic Coordinates chr2: 64340759 - 64340839
Description Homo sapiens miR-4433a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4433a-3p
Sequence 51| ACAGGAGUGGGGGUGGGACAU |71
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs751480515 9 dbSNP
rs557760377 15 dbSNP
rs1479580865 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CPT1A   
Synonyms CPT1, CPT1-L, L-CPT1
Description carnitine palmitoyltransferase 1A
Transcript NM_001876   
Other Transcripts NM_001031847   
Expression
Putative miRNA Targets on CPT1A
3'UTR of CPT1A
(miRNA target sites are highlighted)
>CPT1A|NM_001876|3'UTR
   1 TTCCACTGGAGCTGCTGGGAAGGAAAACGAGCTCTTCTGATGCAAACCAAATGAAAAATAGGCATTAATCCTGACCTTAG
  81 CTCGGGATGAAACACTGCTCTTAAAAAAACTCAGTTTTCCTTCCAGAAAATGTGGGTGTTTTTTTTTCCTAGAACAGTAT
 161 CTCTCCCCTGTGAAGCATAACCCCACTACTTCCAGACTTGCCCTCCCTTGGGGGACATCTGATAAAGTCTCCCCTGATGT
 241 CTCCGCATCGGCTTGGATTTATTAAGGGATGCAAATCTTGTTGAGTTAATGAAGGAATTAGTAGGGTTGTGGCTTCACAC
 321 ACAGTGGAATGGAAATGGTGTGCTTTCTCAGTGGCAACCGAAGGCCTAGTGCTTAAGGGCATTTAGCATCATCCAAGCAG
 401 GGTAAACTTTTGTTTTGTTAAAAGAAAAATGTGTTATTCAAGTTGGTGTCCCCAGTTGTAGCTAACACATCTGGAATGCA
 481 CTAACCAAAATGCTGTGCTTTGGAGACCTGCTTTTGTCACCGTGGGTAACCGTTCCCGTCTGGTCCAGTAGCCTGTGTTT
 561 GCCTCTCCACATTTGAAGCAAGCAGGATGCAAGGTCTTCAGTTTTACTGACCTTGTATGTCTTCAAGTCTTCACAACCCA
 641 GTGCCTTAAAAATGAAAGGCCCTAAATGTAAGGGAGATGGAGAGAAAGATTTATTTTGTAGAGTCTTTGGGTGGAATTGT
 721 GGGTATACTGTTCCCTTCACAATTGACTGAGTATGGATAACCGTACATAAGCATTTGCTACACCCCACCAGCCCCCTCCC
 801 CCTCAGAAACACCAGTTCCTTCCCAAGGGCAGCTGTGCCAGACTCCCCTCCCGGGACTGCCTTCTTGTCATCATAAGCAA
 881 CAAAAGAAATAACAGGCACATGTCATAAAAGGGGAGCAAGGGCCGTGATGGTCAGATAATTCACTCAAGAATAAAACATG
 961 ACACGTGCCTCAGGAGGATCTCTTTCCCAAAGTGACAGCAAGGAGGGCAGGGCATCGGCCACCAAGCGGGGACTAGCAAG
1041 TGAGGAAGGGGAGGGCAGCCCACCGTGGTGAGGAGAGAGTGGCTCCACGACCCCAAGGGATGGCCTTCTCCTCCCACCCG
1121 GTGAGGGGAAAGACTCACCAGAGGGTGATGGAGACAGTATGCCGGCTCACCTTGGTGACCAGCCAAGATGTCTCAAGTGA
1201 CAGTGCTAGGTGTTCACCCAGCCTGTCCTTCAGATAGGAGTGCCTTCACGAAAGCGTCTCATGGACCACAAAGCAATTAT
1281 GCACTGAGTCATCTTCAGTATTTAATGCAAAAATGAAGCATCATGGAATGAAATTCCCACTGTCTGTCATGACAAGCTTA
1361 GCTGTCCATTGTTTTAAATTGTGTATTTATTTTTTTGACCACTTGGTTCTAGTTGGGCCTGACTCCTTCAGAGTGCTGCA
1441 CCCCGATAGTACAACAGCGATGGCTGAACTGTTGGAGTCGATGGAAGGTGCTTGCCGGAGAACACGTGCCTTTTTTTTTT
1521 TTTTTTTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAGCATCT
1601 GCCTTGCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGGATTACACGCCCAACACCATGCCCTGCTAAT
1681 TTTTGTATTTTTAGTAGAGACGGGGTTTCATCATATTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTG
1761 CCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCGCGGCCCACATGCATGTTTTATGTATGTATACTT
1841 CATGATGTAAAAATCCCACCTTTATGGGCCAAAGATTTTTTTTCTCCTGAAAGCAAGAAAAAATGAAAACAAAAGACAAA
1921 AAAAAAAAAAAAAGCGTCCAGGCGCGGTGGCTCATGCGTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACG
2001 AGGTCAGGAGATGGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATTCAAAAAATGAGCCGGGCGTG
2081 GTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGT
2161 GAGCCGAGATCGCTCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTAAAAAAAAAAGCAAAAACAAACCAA
2241 CAACAAAAGCCCCTGACTGTCCGTCAAGCAGGCAGCGGGGATGTAGCTCTCTCTGCCCTGGGCAAGAATAGCACTTCCCG
2321 TTAAAAGCCAGCAGCCGGCGTCAGTCCCTATCAGAGCCAGCTAGATCATGCACTGTTGACCACTGAGCAATCTGTGTTAC
2401 ACTAGAGTTCACAGGGCATTTTGAGTGTAGACGTGAGTGCTTAAACATATTTGGGTTTCTCTCTCAGGTTTTAAATGTTT
2481 CAAATGTAATTGTTGCTCATCAGTGCAGTTATCAATGCAATTTTATATTCCTTGAGGGGAGAAAGAGGGGTCTTATTGTA
2561 CATGTCCAAGGGGGGTGATAAGAGTATTATCTGTTTAATTTAATTGGAACAAACCATTGTCTTAACGCAGCCATGGTTTG
2641 AATTTGTTATCTTGGGCTGACCGGTGCATGTAAATACAGTATGCTCTTTGGATGTAAATCTTAGAAATGCAGTGTGAATG
2721 TAGGTTATCATTAATAAAACATTAACCCCAGTCTACTACAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uaCAG---GGUGGGGG--UGAGGACa 5'
            |||   |:: :|:|  ||||||| 
Target 5' tgGTCAGGCTGGTCTCGAACTCCTGa 3'
1717 - 1742 149.00 -18.50
2
miRNA  3' uacagggUGGGGGUGAGGACa 5'
                 | :::|||||:|| 
Target 5' gagatggAGTTTCACTCTTGt 3'
1532 - 1552 134.00 -14.60
3
miRNA  3' uaCAGGGU-----GGGGGUGAGGAca 5'
            ||:|:|      ||: ||||||  
Target 5' tgGTTCTAGTTGGGCCTGACTCCTtc 3'
1404 - 1429 131.00 -15.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN20142241 23 COSMIC
COSN31558182 28 COSMIC
COSN30471829 29 COSMIC
COSN30494843 69 COSMIC
COSN13345756 96 COSMIC
COSN30526618 96 COSMIC
COSN30143641 98 COSMIC
COSN30639530 103 COSMIC
COSN20041818 139 COSMIC
COSN28840274 168 COSMIC
COSN22627119 283 COSMIC
COSN1541558 319 COSMIC
COSN16681972 591 COSMIC
COSN21082838 662 COSMIC
COSN1541557 859 COSMIC
COSN7017866 1028 COSMIC
COSN28162878 1431 COSMIC
COSN17878572 1492 COSMIC
COSN32069712 1551 COSMIC
COSN15197786 1666 COSMIC
COSN24399243 2134 COSMIC
COSN17265974 2192 COSMIC
COSN30541562 2250 COSMIC
COSN1136916 2291 COSMIC
COSN30599527 2337 COSMIC
COSN31487101 2339 COSMIC
COSN30594978 2393 COSMIC
COSN6611049 2447 COSMIC
COSN31570407 2474 COSMIC
COSN31581500 2591 COSMIC
COSN31604220 2627 COSMIC
COSN30138836 2662 COSMIC
COSN31582331 2662 COSMIC
COSN30151027 2709 COSMIC
COSN31492564 2712 COSMIC
COSN30159941 2716 COSMIC
COSN30138262 2722 COSMIC
COSN30505899 2744 COSMIC
COSN30492281 2753 COSMIC
rs2278907 1059 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs772856784 3 dbSNP
rs1254173288 4 dbSNP
rs771848705 12 dbSNP
rs747985267 15 dbSNP
rs1383467224 16 dbSNP
rs941054073 22 dbSNP
rs374992208 28 dbSNP
rs199893368 29 dbSNP
rs1437985427 36 dbSNP
rs909623352 39 dbSNP
rs748798764 44 dbSNP
rs779684589 50 dbSNP
rs1470535704 57 dbSNP
rs1047292169 62 dbSNP
rs1303036815 63 dbSNP
rs1403993896 82 dbSNP
rs1051521469 84 dbSNP
rs1332868486 86 dbSNP
rs929640845 103 dbSNP
rs767472718 115 dbSNP
rs1038473059 122 dbSNP
rs1328193785 125 dbSNP
rs941471408 134 dbSNP
rs1257977403 138 dbSNP
rs1200105089 139 dbSNP
rs564436601 139 dbSNP
rs1252547188 145 dbSNP
rs981690818 147 dbSNP
rs1044641174 148 dbSNP
rs1163005895 148 dbSNP
rs369823986 148 dbSNP
rs1439086549 156 dbSNP
rs972075006 160 dbSNP
rs1376300831 166 dbSNP
rs1394202668 168 dbSNP
rs916040175 172 dbSNP
rs1172664393 177 dbSNP
rs1370580117 181 dbSNP
rs1326902564 188 dbSNP
rs1306071221 197 dbSNP
rs1349864230 199 dbSNP
rs950269147 204 dbSNP
rs991626689 212 dbSNP
rs754845537 216 dbSNP
rs1352879547 223 dbSNP
rs1232755550 227 dbSNP
rs917529791 244 dbSNP
rs1429073950 245 dbSNP
rs1421505387 247 dbSNP
rs561605607 249 dbSNP
rs957569323 250 dbSNP
rs955765459 251 dbSNP
rs925658601 264 dbSNP
rs184270519 266 dbSNP
rs1172599754 269 dbSNP
rs1215227438 270 dbSNP
rs1479434460 276 dbSNP
rs1166234005 287 dbSNP
rs766066286 288 dbSNP
rs192951318 297 dbSNP
rs1250298979 298 dbSNP
rs1458285866 307 dbSNP
rs549711357 309 dbSNP
rs1365164436 324 dbSNP
rs964489942 339 dbSNP
rs1017404371 341 dbSNP
rs1367693933 349 dbSNP
rs1008713441 350 dbSNP
rs954784867 359 dbSNP
rs1224368744 360 dbSNP
rs540337961 364 dbSNP
rs1488339884 371 dbSNP
rs1304588086 373 dbSNP
rs998071727 375 dbSNP
rs772841681 377 dbSNP
rs1026264918 386 dbSNP
rs1388777498 388 dbSNP
rs572939607 392 dbSNP
rs1186285025 396 dbSNP
rs1039674784 398 dbSNP
rs1423912244 401 dbSNP
rs1005385394 416 dbSNP
rs1166793191 418 dbSNP
rs1297698371 424 dbSNP
rs1460718360 431 dbSNP
rs1320913428 432 dbSNP
rs552169089 441 dbSNP
rs888305217 442 dbSNP
rs554624367 455 dbSNP
rs761219765 456 dbSNP
rs188884544 469 dbSNP
rs1321702189 470 dbSNP
rs927630761 479 dbSNP
rs527854492 488 dbSNP
rs1270333819 489 dbSNP
rs568819871 495 dbSNP
rs1206383392 498 dbSNP
rs1046489721 508 dbSNP
rs950269340 515 dbSNP
rs916157843 521 dbSNP
rs1472838476 522 dbSNP
rs991723392 525 dbSNP
rs1171746051 529 dbSNP
rs879212647 531 dbSNP
rs557014887 532 dbSNP
rs1395499552 535 dbSNP
rs1411014055 537 dbSNP
rs150102435 538 dbSNP
rs1159861437 539 dbSNP
rs1416961156 542 dbSNP
rs1249311816 548 dbSNP
rs967867328 549 dbSNP
rs1029627472 561 dbSNP
rs934279884 567 dbSNP
rs1209408918 573 dbSNP
rs1347742663 582 dbSNP
rs1450277262 586 dbSNP
rs185556385 590 dbSNP
rs1235811925 593 dbSNP
rs546355771 600 dbSNP
rs978451266 605 dbSNP
rs1290776725 617 dbSNP
rs964078432 623 dbSNP
rs1327496925 625 dbSNP
rs1223645027 629 dbSNP
rs964416093 631 dbSNP
rs1442581351 652 dbSNP
rs910325643 653 dbSNP
rs1392163234 659 dbSNP
rs527801838 668 dbSNP
rs954576920 677 dbSNP
rs1311108597 690 dbSNP
rs772527141 693 dbSNP
rs1253944821 698 dbSNP
rs1414123332 705 dbSNP
rs1375937472 715 dbSNP
rs1157836128 716 dbSNP
rs1175295730 721 dbSNP
rs888254452 724 dbSNP
rs533401453 728 dbSNP
rs1416315804 729 dbSNP
rs1025920403 730 dbSNP
rs1451273657 733 dbSNP
rs1374875172 743 dbSNP
rs1410566912 745 dbSNP
rs993893279 752 dbSNP
rs1026612349 762 dbSNP
rs566652518 763 dbSNP
rs961647173 764 dbSNP
rs774523688 785 dbSNP
rs947722203 786 dbSNP
rs1347620396 787 dbSNP
rs548263723 788 dbSNP
rs894842128 794 dbSNP
rs1055942722 796 dbSNP
rs530083614 798 dbSNP
rs1186545836 799 dbSNP
rs562899721 801 dbSNP
rs544584298 802 dbSNP
rs1258754600 818 dbSNP
rs532797427 823 dbSNP
rs771243449 830 dbSNP
rs1478898501 833 dbSNP
rs1189670677 834 dbSNP
rs946268134 835 dbSNP
rs1430473137 843 dbSNP
rs1170503942 845 dbSNP
rs1368796250 849 dbSNP
rs565493475 852 dbSNP
rs1324810649 853 dbSNP
rs373835418 855 dbSNP
rs922674099 868 dbSNP
rs976855927 870 dbSNP
rs1434817231 884 dbSNP
rs1300804446 887 dbSNP
rs1369857929 893 dbSNP
rs1228697510 894 dbSNP
rs772298375 895 dbSNP
rs1276066524 900 dbSNP
rs1240076559 905 dbSNP
rs1195104541 911 dbSNP
rs1290565032 923 dbSNP
rs1331433424 925 dbSNP
rs1453085222 926 dbSNP
rs1211660358 932 dbSNP
rs1252162291 934 dbSNP
rs964028794 935 dbSNP
rs1190785365 948 dbSNP
rs749467869 951 dbSNP
rs1388346250 960 dbSNP
rs1475152821 964 dbSNP
rs796270955 965 dbSNP
rs1403937211 970 dbSNP
rs1232688297 983 dbSNP
rs895987150 999 dbSNP
rs1053756084 1007 dbSNP
rs984016172 1016 dbSNP
rs952611924 1028 dbSNP
rs1380436938 1033 dbSNP
rs1025442343 1036 dbSNP
rs1284705656 1043 dbSNP
rs149870808 1043 dbSNP
rs371693398 1044 dbSNP
rs906406348 1048 dbSNP
rs778043060 1049 dbSNP
rs2278907 1059 dbSNP
rs1272267367 1064 dbSNP
rs1011963159 1065 dbSNP
rs545441003 1085 dbSNP
rs1053387049 1089 dbSNP
rs936220061 1094 dbSNP
rs904763268 1097 dbSNP
rs757853252 1104 dbSNP
rs1188399089 1107 dbSNP
rs1370287386 1108 dbSNP
rs1042009812 1111 dbSNP
rs1164876000 1112 dbSNP
rs746057025 1115 dbSNP
rs910268006 1119 dbSNP
rs1322103678 1123 dbSNP
rs1382416281 1136 dbSNP
rs748192002 1143 dbSNP
rs143537796 1144 dbSNP
rs1419378581 1145 dbSNP
rs922824885 1148 dbSNP
rs193298043 1149 dbSNP
rs1445741213 1150 dbSNP
rs919112145 1155 dbSNP
rs972338136 1163 dbSNP
rs116862626 1164 dbSNP
rs1466432170 1167 dbSNP
rs1350147513 1168 dbSNP
rs1201255566 1172 dbSNP
rs114371223 1179 dbSNP
rs984112357 1183 dbSNP
rs538573155 1188 dbSNP
rs1023015625 1195 dbSNP
rs1473774462 1200 dbSNP
rs2278908 1202 dbSNP
rs1452553074 1205 dbSNP
rs867531201 1217 dbSNP
rs1225192235 1218 dbSNP
rs942668944 1219 dbSNP
rs1403691781 1224 dbSNP
rs1412425085 1226 dbSNP
rs754810651 1236 dbSNP
rs1325736416 1243 dbSNP
rs895942763 1249 dbSNP
rs552826487 1250 dbSNP
rs952777098 1254 dbSNP
rs1411596866 1255 dbSNP
rs1304520738 1261 dbSNP
rs1334986389 1262 dbSNP
rs1234178612 1267 dbSNP
rs1258039892 1271 dbSNP
rs751426944 1273 dbSNP
rs1392017125 1280 dbSNP
rs1324875404 1288 dbSNP
rs1031825257 1294 dbSNP
rs1176017832 1301 dbSNP
rs114604344 1308 dbSNP
rs1199091599 1314 dbSNP
rs1396576324 1319 dbSNP
rs1043297730 1323 dbSNP
rs527734626 1346 dbSNP
rs1172407494 1362 dbSNP
rs970937182 1364 dbSNP
rs942999478 1367 dbSNP
rs562540289 1368 dbSNP
rs1296409917 1378 dbSNP
rs77452976 1381 dbSNP
rs1387179126 1392 dbSNP
rs869126111 1393 dbSNP
rs1474724407 1406 dbSNP
rs1372949714 1412 dbSNP
rs1194349904 1424 dbSNP
rs754572795 1431 dbSNP
rs753516935 1433 dbSNP
rs1213348274 1436 dbSNP
rs1203007381 1441 dbSNP
rs1251281308 1444 dbSNP
rs186748671 1445 dbSNP
rs1292145457 1446 dbSNP
rs569169305 1447 dbSNP
rs1338676436 1453 dbSNP
rs766091449 1459 dbSNP
rs1192657187 1460 dbSNP
rs971922404 1467 dbSNP
rs902199150 1474 dbSNP
rs1042347282 1480 dbSNP
rs909091839 1485 dbSNP
rs550915708 1488 dbSNP
rs1327601568 1491 dbSNP
rs1441213687 1493 dbSNP
rs1440382638 1494 dbSNP
rs1321523356 1496 dbSNP
rs1010503115 1497 dbSNP
rs1212949782 1503 dbSNP
rs868561642 1505 dbSNP
rs1326293330 1506 dbSNP
rs901316114 1508 dbSNP
rs1041238486 1509 dbSNP
rs1303107741 1510 dbSNP
rs1432145309 1511 dbSNP
rs1393691575 1521 dbSNP
rs1212661602 1532 dbSNP
rs1248304975 1532 dbSNP
rs1388781838 1532 dbSNP
rs1418185314 1532 dbSNP
rs1468339653 1532 dbSNP
rs1486560840 1532 dbSNP
rs1491011472 1532 dbSNP
rs35803657 1532 dbSNP
rs542227664 1532 dbSNP
rs59285957 1532 dbSNP
rs1368566214 1533 dbSNP
rs1428901763 1533 dbSNP
rs1288290192 1534 dbSNP
rs1193344758 1535 dbSNP
rs12277917 1536 dbSNP
rs1478487758 1545 dbSNP
rs532714022 1549 dbSNP
rs1292035892 1552 dbSNP
rs1334583151 1558 dbSNP
rs915926036 1563 dbSNP
rs1268357283 1565 dbSNP
rs1318290559 1568 dbSNP
rs12790880 1576 dbSNP
rs993265268 1579 dbSNP
rs911302266 1583 dbSNP
rs1483318529 1584 dbSNP
rs1189939167 1585 dbSNP
rs1255396495 1586 dbSNP
rs1474749873 1597 dbSNP
rs960133520 1602 dbSNP
rs1409891332 1603 dbSNP
rs565603665 1607 dbSNP
rs547295948 1608 dbSNP
rs931288317 1615 dbSNP
rs1207253092 1617 dbSNP
rs1032211716 1618 dbSNP
rs1311590215 1619 dbSNP
rs918625539 1621 dbSNP
rs973036540 1624 dbSNP
rs1410987031 1626 dbSNP
rs1281570092 1629 dbSNP
rs1371671710 1644 dbSNP
rs1345590516 1648 dbSNP
rs1279366254 1651 dbSNP
rs970673436 1655 dbSNP
rs182416729 1657 dbSNP
rs758106736 1658 dbSNP
rs959234882 1663 dbSNP
rs1021810293 1665 dbSNP
rs1346687901 1667 dbSNP
rs561463279 1669 dbSNP
rs1032031455 1671 dbSNP
rs542360006 1674 dbSNP
rs1000647944 1680 dbSNP
rs1182845246 1681 dbSNP
rs966750670 1691 dbSNP
rs1335884265 1694 dbSNP
rs1020638040 1701 dbSNP
rs796481705 1702 dbSNP
rs575265090 1705 dbSNP
rs1374116518 1706 dbSNP
rs1173412763 1711 dbSNP
rs1455634954 1714 dbSNP
rs1171781751 1715 dbSNP
rs1415471550 1715 dbSNP
rs1427687171 1718 dbSNP
rs1051421932 1719 dbSNP
rs1157101659 1720 dbSNP
rs1469793496 1725 dbSNP
rs901436669 1727 dbSNP
rs1041354547 1728 dbSNP
rs997633930 1730 dbSNP
rs1278574710 1732 dbSNP
rs1184371846 1733 dbSNP
rs1484656240 1735 dbSNP
rs1236043570 1737 dbSNP
rs1256632784 1739 dbSNP
rs1300574070 1747 dbSNP
rs563159990 1747 dbSNP
rs1196278790 1756 dbSNP
rs1443983634 1757 dbSNP
rs1275084057 1765 dbSNP
rs1435867047 1773 dbSNP
rs1281856667 1776 dbSNP
rs1222891385 1777 dbSNP
rs1036527017 1790 dbSNP
rs1289694635 1791 dbSNP
rs1247084609 1793 dbSNP
rs1455696289 1802 dbSNP
rs1007062212 1806 dbSNP
rs377059717 1807 dbSNP
rs190153251 1808 dbSNP
rs1449374686 1809 dbSNP
rs552892244 1818 dbSNP
rs1361307387 1819 dbSNP
rs750020928 1822 dbSNP
rs1409908465 1824 dbSNP
rs1316623844 1831 dbSNP
rs1324539979 1832 dbSNP
rs1400360401 1841 dbSNP
rs1412896205 1854 dbSNP
rs1442583364 1855 dbSNP
rs187250131 1872 dbSNP
rs1474304442 1875 dbSNP
rs1044971934 1877 dbSNP
rs1417232723 1884 dbSNP
rs1182425399 1892 dbSNP
rs1473718968 1894 dbSNP
rs1240165106 1895 dbSNP
rs373164538 1897 dbSNP
rs1212035291 1904 dbSNP
rs1469670083 1904 dbSNP
rs1465072688 1905 dbSNP
rs1269705070 1906 dbSNP
rs1211425726 1907 dbSNP
rs1447639920 1910 dbSNP
rs369201016 1910 dbSNP
rs1293339904 1911 dbSNP
rs1229430560 1915 dbSNP
rs984738990 1917 dbSNP
rs1268797665 1920 dbSNP
rs1162346563 1934 dbSNP
rs1166619477 1934 dbSNP
rs1288378629 1934 dbSNP
rs1420442430 1934 dbSNP
rs1460240620 1934 dbSNP
rs750569368 1934 dbSNP
rs1417869484 1935 dbSNP
rs1231286362 1936 dbSNP
rs1272332523 1937 dbSNP
rs1351590506 1938 dbSNP
rs1389833495 1943 dbSNP
rs1259680281 1944 dbSNP
rs1446547057 1945 dbSNP
rs183535620 1946 dbSNP
rs1260316543 1947 dbSNP
rs951667566 1948 dbSNP
rs1474424809 1950 dbSNP
rs573504666 1955 dbSNP
rs1453962783 1956 dbSNP
rs1165521811 1957 dbSNP
rs555499476 1958 dbSNP
rs1313394183 1960 dbSNP
rs1357224099 1965 dbSNP
rs1412863596 1966 dbSNP
rs947938017 1975 dbSNP
rs1336148716 1976 dbSNP
rs1241420948 1983 dbSNP
rs1259222066 1984 dbSNP
rs1350035790 1985 dbSNP
rs917850280 1988 dbSNP
rs1417221065 1989 dbSNP
rs1251629924 1992 dbSNP
rs1484941493 1992 dbSNP
rs56096332 1992 dbSNP
rs1449913714 1993 dbSNP
rs1361772816 2000 dbSNP
rs1438709167 2002 dbSNP
rs1173640724 2003 dbSNP
rs1376779646 2010 dbSNP
rs1249641804 2012 dbSNP
rs11228340 2013 dbSNP
rs1305121558 2014 dbSNP
rs924680345 2015 dbSNP
rs977494860 2016 dbSNP
rs1223048551 2018 dbSNP
rs370478461 2019 dbSNP
rs1345846177 2023 dbSNP
rs1210771839 2027 dbSNP
rs1252449638 2028 dbSNP
rs1481822045 2032 dbSNP
rs1194378909 2033 dbSNP
rs187202273 2034 dbSNP
rs1007707278 2036 dbSNP
rs1396337371 2042 dbSNP
rs773116573 2044 dbSNP
rs1031037344 2045 dbSNP
rs533848543 2045 dbSNP
rs997160319 2053 dbSNP
rs572953609 2060 dbSNP
rs1439023884 2064 dbSNP
rs1296172991 2068 dbSNP
rs1370451745 2069 dbSNP
rs1294198354 2073 dbSNP
rs1459569129 2074 dbSNP
rs1352823543 2077 dbSNP
rs1169711075 2078 dbSNP
rs1430293235 2079 dbSNP
rs571657921 2081 dbSNP
rs1225915642 2083 dbSNP
rs1391812496 2085 dbSNP
rs897484009 2086 dbSNP
rs1453439176 2089 dbSNP
rs1267535667 2090 dbSNP
rs1036087384 2093 dbSNP
rs1466737301 2094 dbSNP
rs1190066502 2095 dbSNP
rs1005987095 2096 dbSNP
rs1479406739 2097 dbSNP
rs1168269227 2104 dbSNP
rs1231796484 2105 dbSNP
rs1461804726 2106 dbSNP
rs547364161 2110 dbSNP
rs1343450031 2122 dbSNP
rs1277240512 2124 dbSNP
rs1436031843 2126 dbSNP
rs931431721 2141 dbSNP
rs1289481412 2142 dbSNP
rs1232464078 2148 dbSNP
rs528747090 2149 dbSNP
rs1302310836 2153 dbSNP
rs887554852 2165 dbSNP
rs1388717987 2166 dbSNP
rs1371326412 2168 dbSNP
rs1037043083 2171 dbSNP
rs949449683 2172 dbSNP
rs1044901149 2173 dbSNP
rs1410377537 2174 dbSNP
rs1262471217 2175 dbSNP
rs1475406156 2178 dbSNP
rs1189733481 2181 dbSNP
rs917827921 2181 dbSNP
rs1415433073 2184 dbSNP
rs1404933893 2194 dbSNP
rs1160169587 2196 dbSNP
rs1347006738 2198 dbSNP
rs990720312 2201 dbSNP
rs1171534570 2203 dbSNP
rs561475406 2206 dbSNP
rs1377979588 2211 dbSNP
rs1417169187 2212 dbSNP
rs1177855437 2213 dbSNP
rs1291779762 2213 dbSNP
rs937832490 2216 dbSNP
rs1416908396 2225 dbSNP
rs1056787848 2226 dbSNP
rs1318195154 2226 dbSNP
rs1284705024 2235 dbSNP
rs1406649450 2236 dbSNP
rs938673680 2243 dbSNP
rs113910026 2252 dbSNP
rs1472367176 2255 dbSNP
rs977422880 2256 dbSNP
rs1410508224 2258 dbSNP
rs979569617 2262 dbSNP
rs146937052 2263 dbSNP
rs563431338 2272 dbSNP
rs975766085 2274 dbSNP
rs1358920937 2276 dbSNP
rs182097176 2277 dbSNP
rs1443467390 2280 dbSNP
rs544768058 2281 dbSNP
rs1279757903 2283 dbSNP
rs191052664 2286 dbSNP
rs1374994703 2290 dbSNP
rs1237515321 2291 dbSNP
rs1209336532 2294 dbSNP
rs538352947 2295 dbSNP
rs986256583 2296 dbSNP
rs965744229 2301 dbSNP
rs1276499520 2311 dbSNP
rs558879214 2319 dbSNP
rs1019862085 2320 dbSNP
rs1007178607 2323 dbSNP
rs1234396564 2332 dbSNP
rs1479759164 2333 dbSNP
rs1178285926 2334 dbSNP
rs1455673011 2336 dbSNP
rs1172310157 2337 dbSNP
rs889931238 2339 dbSNP
rs557710901 2347 dbSNP
rs761342493 2348 dbSNP
rs1030541396 2349 dbSNP
rs976756788 2351 dbSNP
rs1027155633 2357 dbSNP
rs1444092263 2359 dbSNP
rs1330310566 2363 dbSNP
rs1371086190 2367 dbSNP
rs1442538328 2370 dbSNP
rs1272582523 2373 dbSNP
rs540938410 2382 dbSNP
rs1215117869 2384 dbSNP
rs1274802388 2398 dbSNP
rs931284100 2398 dbSNP
rs1315299035 2402 dbSNP
rs1198217823 2404 dbSNP
rs1287818872 2426 dbSNP
rs113394033 2433 dbSNP
rs1005912856 2435 dbSNP
rs1246207674 2438 dbSNP
rs1476005828 2441 dbSNP
rs897228542 2447 dbSNP
rs887522372 2451 dbSNP
rs1417773235 2452 dbSNP
rs1037561923 2454 dbSNP
rs949394646 2455 dbSNP
rs896519145 2463 dbSNP
rs1462693097 2469 dbSNP
rs1054936370 2481 dbSNP
rs1311057243 2490 dbSNP
rs1431362995 2493 dbSNP
rs1271899818 2503 dbSNP
rs1338141952 2506 dbSNP
rs1217850521 2508 dbSNP
rs185026543 2514 dbSNP
rs1337143337 2515 dbSNP
rs1289209794 2525 dbSNP
rs1395363871 2527 dbSNP
rs1447693019 2531 dbSNP
rs896328403 2534 dbSNP
rs1261725492 2540 dbSNP
rs1056355685 2544 dbSNP
rs180958689 2545 dbSNP
rs370665972 2546 dbSNP
rs1304331433 2548 dbSNP
rs377375265 2556 dbSNP
rs1161148901 2557 dbSNP
rs1389350081 2557 dbSNP
rs1451205195 2558 dbSNP
rs1320192099 2567 dbSNP
rs1358487899 2574 dbSNP
rs1399332678 2576 dbSNP
rs188446249 2578 dbSNP
rs1357161700 2583 dbSNP
rs1242838385 2584 dbSNP
rs1283890430 2585 dbSNP
rs1344180356 2589 dbSNP
rs1351472198 2610 dbSNP
rs925079127 2626 dbSNP
rs539131366 2627 dbSNP
rs1488226737 2631 dbSNP
rs1212251769 2651 dbSNP
rs571670004 2662 dbSNP
rs1414991366 2663 dbSNP
rs184796065 2666 dbSNP
rs181603153 2667 dbSNP
rs914626755 2678 dbSNP
rs945236791 2682 dbSNP
rs189967951 2684 dbSNP
rs185442467 2686 dbSNP
rs549398357 2694 dbSNP
rs531177300 2700 dbSNP
rs1394129870 2717 dbSNP
rs1485020821 2720 dbSNP
rs1333274830 2739 dbSNP
rs976304389 2740 dbSNP
rs1336509374 2742 dbSNP
rs1241485653 2743 dbSNP
rs756547937 2745 dbSNP
rs750988576 2746 dbSNP
rs767933945 2747 dbSNP
rs1374414709 2748 dbSNP
rs1299628575 2749 dbSNP
rs757579878 2750 dbSNP
rs372015862 2753 dbSNP
rs764286178 2757 dbSNP
rs200989143 2761 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uaCAG---GGUGGGGG--UGAGGACa 5'
            |||   |:: :|:|  ||||||| 
Target 5' ugGUCAGGCUGGUCUCGAACUCCUGa 3'
3 - 28
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000265641.5 | 3UTR | AUUGGUCAGGCUGGUCUCGAACUCCUGACCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
256 hsa-miR-4433a-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT088097 SEPT2 septin 2 2 2
MIRT143134 MGRN1 mahogunin ring finger 1 2 2
MIRT153912 NCOA3 nuclear receptor coactivator 3 2 2
MIRT154894 GNAS GNAS complex locus 2 4
MIRT200996 ZNF805 zinc finger protein 805 2 2
MIRT215729 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT235593 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT263250 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT317951 CDC5L cell division cycle 5 like 2 4
MIRT325572 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT354739 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 2 2
MIRT444552 UBE2D3 ubiquitin conjugating enzyme E2 D3 2 4
MIRT446978 SUSD5 sushi domain containing 5 2 2
MIRT451036 ZNF610 zinc finger protein 610 2 2
MIRT451596 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT452025 NLRP6 NLR family pyrin domain containing 6 2 2
MIRT452594 CA6 carbonic anhydrase 6 2 2
MIRT452768 TCEA3 transcription elongation factor A3 2 4
MIRT452959 ZNF844 zinc finger protein 844 2 2
MIRT453191 ACSF2 acyl-CoA synthetase family member 2 2 2
MIRT453382 RHD Rh blood group D antigen 2 2
MIRT453685 CEBPD CCAAT/enhancer binding protein delta 2 2
MIRT455272 DDX39B DExD-box helicase 39B 2 8
MIRT455346 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT456494 SERAC1 serine active site containing 1 2 2
MIRT456585 NID1 nidogen 1 2 2
MIRT456888 DDA1 DET1 and DDB1 associated 1 2 2
MIRT457123 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT457852 ZNF324B zinc finger protein 324B 2 2
MIRT457987 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT459278 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 2
MIRT459625 SLC25A33 solute carrier family 25 member 33 2 2
MIRT459715 SGK494 uncharacterized serine/threonine-protein kinase SgK494 2 2
MIRT460057 RPL22L1 ribosomal protein L22 like 1 2 2
MIRT460182 UNK unkempt family zinc finger 2 6
MIRT460288 PDE11A phosphodiesterase 11A 2 2
MIRT460841 EGF epidermal growth factor 2 4
MIRT460860 TBC1D19 TBC1 domain family member 19 2 2
MIRT461519 EMC7 ER membrane protein complex subunit 7 2 2
MIRT461729 SLC27A1 solute carrier family 27 member 1 2 4
MIRT461821 SNAP23 synaptosome associated protein 23 2 2
MIRT462066 CCDC77 coiled-coil domain containing 77 2 4
MIRT462084 MSANTD2 Myb/SANT DNA binding domain containing 2 2 2
MIRT462508 MTFMT mitochondrial methionyl-tRNA formyltransferase 2 10
MIRT464239 VCP valosin containing protein 2 2
MIRT465316 TRAF5 TNF receptor associated factor 5 2 2
MIRT466549 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467128 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 8
MIRT468091 SHCBP1 SHC binding and spindle associated 1 2 2
MIRT469630 RAD21 RAD21 cohesin complex component 2 6
MIRT471097 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472704 MYBL1 MYB proto-oncogene like 1 2 2
MIRT472830 MTMR10 myotubularin related protein 10 2 2
MIRT472872 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT472895 MTDH metadherin 2 2
MIRT473728 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT473859 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT474047 LONRF1 LON peptidase N-terminal domain and ring finger 1 2 2
MIRT474297 LAMC1 laminin subunit gamma 1 2 2
MIRT474658 KLF13 Kruppel like factor 13 2 2
MIRT475234 IKZF3 IKAROS family zinc finger 3 2 2
MIRT475500 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT475742 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT475793 HDGF heparin binding growth factor 2 2
MIRT477254 ERGIC2 ERGIC and golgi 2 2 2
MIRT478228 DDX52 DExD-box helicase 52 2 2
MIRT478393 DCTN5 dynactin subunit 5 2 2
MIRT478754 CS citrate synthase 2 2
MIRT478827 CRKL CRK like proto-oncogene, adaptor protein 2 4
MIRT480234 C9orf41 carnosine N-methyltransferase 1 2 2
MIRT480597 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT484121 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT484689 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT486331 C11orf54 chromosome 11 open reading frame 54 2 4
MIRT488599 FAM3C family with sequence similarity 3 member C 2 8
MIRT488833 MRRF mitochondrial ribosome recycling factor 2 2
MIRT492523 RAB15 RAB15, member RAS oncogene family 2 4
MIRT493632 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT500026 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501075 SMAD7 SMAD family member 7 2 8
MIRT503094 BTG2 BTG anti-proliferation factor 2 2 4
MIRT503336 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT505465 STMN1 stathmin 1 2 4
MIRT505726 SERTAD3 SERTA domain containing 3 2 4
MIRT509333 MS4A4A membrane spanning 4-domains A4A 2 2
MIRT509978 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 4
MIRT513068 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT513446 EMP1 epithelial membrane protein 1 2 6
MIRT513736 PSD3 pleckstrin and Sec7 domain containing 3 2 4
MIRT513996 CENPQ centromere protein Q 2 4
MIRT516538 MIXL1 Mix paired-like homeobox 2 2
MIRT517606 SAV1 salvador family WW domain containing protein 1 2 2
MIRT518064 CEP89 centrosomal protein 89 2 2
MIRT518119 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT518325 WDR92 WD repeat domain 92 2 2
MIRT519048 ABCB11 ATP binding cassette subfamily B member 11 2 2
MIRT520972 SPPL2A signal peptide peptidase like 2A 2 4
MIRT521359 RPL35A ribosomal protein L35a 2 2
MIRT523359 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT523801 FAM63A MINDY lysine 48 deubiquitinase 1 2 2
MIRT524622 C7orf73 short transmembrane mitochondrial protein 1 2 2
MIRT525550 PHB2 prohibitin 2 2 4
MIRT529709 ZBTB49 zinc finger and BTB domain containing 49 2 2
MIRT531605 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT532387 UMPS uridine monophosphate synthetase 2 2
MIRT534468 SCD stearoyl-CoA desaturase 2 4
MIRT537546 ETNK1 ethanolamine kinase 1 2 2
MIRT541619 C11orf31 selenoprotein H 2 2
MIRT548380 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT549523 HDDC2 HD domain containing 2 2 2
MIRT549774 SOD2 superoxide dismutase 2 2 2
MIRT550578 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551498 CENPN centromere protein N 2 4
MIRT552301 ITGA3 integrin subunit alpha 3 2 2
MIRT555400 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT556399 LUC7L LUC7 like 2 2
MIRT557047 HOXB3 homeobox B3 2 2
MIRT558072 ERO1L endoplasmic reticulum oxidoreductase 1 alpha 1 2
MIRT559659 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT561239 ZNF354B zinc finger protein 354B 2 2
MIRT566899 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT568786 FAM120B family with sequence similarity 120B 2 2
MIRT574014 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT574885 Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 2 2
MIRT575243 Serping1 serine (or cysteine) peptidase inhibitor, clade G, member 1 2 2
MIRT576194 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576309 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576484 Lhx4 LIM homeobox protein 4 2 3
MIRT576646 Mill2 MHC I like leukocyte 2 1 1
MIRT576708 Kras Kirsten rat sarcoma viral oncogene homolog 2 2
MIRT576855 Socs6 suppressor of cytokine signaling 6 2 2
MIRT576950 Aldoa aldolase A, fructose-bisphosphate 2 2
MIRT617133 ZNF556 zinc finger protein 556 2 4
MIRT617928 ZNF783 zinc finger family member 783 2 2
MIRT618981 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT621100 SIX3 SIX homeobox 3 2 2
MIRT624537 BROX BRO1 domain and CAAX motif containing 2 2
MIRT625663 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT627059 DCTN6 dynactin subunit 6 2 2
MIRT628319 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT630859 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT632295 TMEM65 transmembrane protein 65 2 2
MIRT634115 ZNF207 zinc finger protein 207 2 2
MIRT634736 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT635655 NDST3 N-deacetylase and N-sulfotransferase 3 2 2
MIRT635772 PDCL3 phosducin like 3 2 2
MIRT635911 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT636365 OGFRL1 opioid growth factor receptor like 1 2 4
MIRT637251 GLRX2 glutaredoxin 2 2 2
MIRT638705 FZD4 frizzled class receptor 4 2 2
MIRT639640 PREX2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 2 2
MIRT639676 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT642267 SMIM17 small integral membrane protein 17 2 2
MIRT642372 ZNF581 zinc finger protein 581 2 2
MIRT643545 SLC25A17 solute carrier family 25 member 17 2 2
MIRT647994 PDE12 phosphodiesterase 12 2 2
MIRT649094 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT650993 ZNF770 zinc finger protein 770 2 2
MIRT651956 UBE2N ubiquitin conjugating enzyme E2 N 2 2
MIRT652977 SUN2 Sad1 and UNC84 domain containing 2 2 2
MIRT654389 RBM12B RNA binding motif protein 12B 2 2
MIRT655637 OLFML2A olfactomedin like 2A 2 2
MIRT655729 NRXN3 neurexin 3 2 2
MIRT658171 FCHSD1 FCH and double SH3 domains 1 2 2
MIRT660937 ACOX1 acyl-CoA oxidase 1 2 2
MIRT662112 CERKL ceramide kinase like 2 2
MIRT662302 MPV17L MPV17 mitochondrial inner membrane protein like 2 2
MIRT662993 TMEM59 transmembrane protein 59 2 2
MIRT663071 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT663704 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663864 MUC20 mucin 20, cell surface associated 2 2
MIRT665185 HAUS5 HAUS augmin like complex subunit 5 2 4
MIRT665402 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT665688 TNPO3 transportin 3 2 2
MIRT665795 TMEM170A transmembrane protein 170A 2 2
MIRT665847 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT666999 PDPN podoplanin 2 2
MIRT667598 LIPC lipase C, hepatic type 2 2
MIRT668576 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT670960 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT671187 ZNF891 zinc finger protein 891 2 2
MIRT671739 ZNF451 zinc finger protein 451 2 2
MIRT672745 ZNF585B zinc finger protein 585B 2 4
MIRT673446 ZNF583 zinc finger protein 583 2 2
MIRT679843 GPR75 G protein-coupled receptor 75 2 2
MIRT680556 ZNF584 zinc finger protein 584 2 2
MIRT680661 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT681285 RFC2 replication factor C subunit 2 2 2
MIRT683264 ZNF329 zinc finger protein 329 2 2
MIRT684519 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT685065 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685157 DTWD2 DTW domain containing 2 2 2
MIRT685168 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT685470 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT686001 NEK4 NIMA related kinase 4 2 2
MIRT687027 RNF24 ring finger protein 24 2 2
MIRT687543 MOB1B MOB kinase activator 1B 2 2
MIRT687592 MANEAL mannosidase endo-alpha like 2 2
MIRT687753 KIAA1328 KIAA1328 2 2
MIRT688050 GLUL glutamate-ammonia ligase 2 2
MIRT688374 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 2 2
MIRT688802 CBFA2T3 CBFA2/RUNX1 translocation partner 3 2 2
MIRT688957 ATXN3 ataxin 3 2 2
MIRT689281 C5AR2 complement component 5a receptor 2 2 2
MIRT689988 NNMT nicotinamide N-methyltransferase 2 2
MIRT689997 MMP17 matrix metallopeptidase 17 2 2
MIRT690014 LUZP2 leucine zipper protein 2 2 2
MIRT690161 ELP3 elongator acetyltransferase complex subunit 3 2 2
MIRT690379 ZSWIM7 zinc finger SWIM-type containing 7 2 2
MIRT690563 MICA MHC class I polypeptide-related sequence A 2 2
MIRT691891 EVC EvC ciliary complex subunit 1 2 2
MIRT693107 SCNM1 sodium channel modifier 1 2 2
MIRT693832 ZFP64 ZFP64 zinc finger protein 2 2
MIRT694105 ZNF446 zinc finger protein 446 2 2
MIRT694179 ZNF486 zinc finger protein 486 2 2
MIRT694475 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT694998 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 2 2
MIRT695031 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT695163 TCTN2 tectonic family member 2 2 2
MIRT695525 SLC25A34 solute carrier family 25 member 34 2 2
MIRT696067 ZNF264 zinc finger protein 264 2 2
MIRT696616 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT696661 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696705 PNPO pyridoxamine 5'-phosphate oxidase 2 2
MIRT697173 INMT indolethylamine N-methyltransferase 2 2
MIRT697303 ZNF652 zinc finger protein 652 2 2
MIRT697491 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT698657 TERF2 telomeric repeat binding factor 2 2 2
MIRT699042 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699185 SLX4IP SLX4 interacting protein 2 2
MIRT699598 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT700150 RNF115 ring finger protein 115 2 2
MIRT700720 PNO1 partner of NOB1 homolog 2 2
MIRT700870 PER2 period circadian clock 2 2 2
MIRT700912 PDXK pyridoxal kinase 2 2
MIRT701095 PAPOLG poly(A) polymerase gamma 2 2
MIRT701194 OTUD3 OTU deubiquitinase 3 2 2
MIRT702203 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT702272 LHX4 LIM homeobox 4 2 3
MIRT703125 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT703252 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT703262 GNL3L G protein nucleolar 3 like 2 2
MIRT703440 FYTTD1 forty-two-three domain containing 1 2 2
MIRT704321 DCUN1D5 defective in cullin neddylation 1 domain containing 5 2 2
MIRT704393 CTSS cathepsin S 2 2
MIRT704483 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT704880 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT704926 CCDC36 coiled-coil domain containing 36 2 2
MIRT705175 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT706561 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT707048 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT711497 PGD phosphogluconate dehydrogenase 2 2
MIRT716644 EPGN epithelial mitogen 2 2
MIRT720083 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT722288 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT725468 GRAP2 GRB2-related adaptor protein 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4433a Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-4433a Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-mir-4433a Vincristine 5978 approved resistant cell line (W1)
hsa-mir-4433a Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4433a-3p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Pancreatic Cancer cell line (BxPC-3)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (mitochondrial RNA)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-4433a-3p Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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