pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CLPX   
Synonyms -
Description caseinolytic mitochondrial matrix peptidase chaperone subunit
Transcript NM_006660   
Expression
Putative miRNA Targets on CLPX
3'UTR of CLPX
(miRNA target sites are highlighted)
>CLPX|NM_006660|3'UTR
   1 ACTGTCATATTGCTGTCTTGTATATACAGCTTTTCCTTCTTTTGTTTAGGATCATAATTGTCTCTACAGTCTGATATTAA
  81 AGGCATTGGATCTATCTTGGATATCATACATGGTCAGAGAAGCCTTTAGGAGAAGAATCAGATCATGTATATAATTGTAA
 161 CATCACATTGATTTTACGGAAGATGTTATATGGACTTTAATGACACAATGTTTAGAGATAAAATGTACATTATTTTGGTT
 241 CAGTTTTTTAAAAAAAATATGCTTTAACAAAATTCTTAGGAATTCTTTTAAGCAATGCAGGTATTGCGATAACTGTAGAT
 321 TTTACAATAATGTTACTCTACAAATGGGAAAATAAATTCTTTAAAATTGAATATTGAGATACCATTCTTTAGTGTTACCT
 401 TTTTTACCCACATGTGTTTCTGAAAATATTGGAATTTTATTCATCTTAAAAATTGGACCAGGTAGGCCGGGCGTGGTGGC
 481 TCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCAAG
 561 ATGGTGAAACCCCATCTCTACTAAAAATATGAAAAATTAGCTGGGTGCCGTGGCAGGTGCCTGTAATCCCAGCTACTCGG
 641 GAGGCTGAGGCAGGAGAATCGCTTGAACTCGGAGGGCAGAGTTTACAGTGAGCTGAGGTTGTGCCACTGCACTCCAGCCT
 721 GGGCGACAAAGTGAGACTCCGTCTCAGGGCGAAAACAAAAAATTGGACCAGGTAGTTTTCAAGTAGTTAAACATTTCATT
 801 GAAAAATACCCTGAAGAACTATATTTTGATAATTGGTTTAGCTGTATTCCTAGTCTTATCTGCTAATGCATGACACTAAC
 881 TTCCCAATTGGTTCTGTAAAAAAGGCCATTTTCTTACCAAGTTGTCTGATTTATTTACCATCTTTTTTTTTTTTTTTTTT
 961 TTAATTGAGCGGAGTCTCACGCTGTCCCAAGCTGAAGTGCAGTGGTGCGATCTTGGCTCACTGCAACCTCCGCCTCCCAG
1041 GTTCAAGCAATTTTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTATAGGCACGCACCACCACACCTGGCTAATTTTTGTA
1121 TTTTTAGTAGAGACAGGGTTTCACCCTGTTGGCCAGGCTAGTCTGTAACTCCTGACCTTGTGATCTGCTGGCCTCAGCCT
1201 CCCAAAGTGCTGGGATTGCAGGCGTAAGCCACCACACCCGGCCTTATTTACCATCTTTAATCCATTTTAGTACTATGGGT
1281 GAGTACATGGAATTGAAGTCTGGCTTAAATCTTCAGAAAGTTATATATCTATTTTATTTTATTTTTTTGAGACAGAGTCT
1361 CGCTGTGTCACCCAGGCTGGAGTACAGTGCCACAATCTTGGCTCACTGCAACCTCTGAGTCCCAGGTTCAAGCGATACTC
1441 ATGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGTGCACCACCACACCTGGCTAATTTTTTGTATTTTTAGTAGAGAC
1521 GGGGTTTCGCCATGTTGCCCAGGCTGGTCTCTCCTGAGCTCAGGCAATCGGCCACCTTGGCCTCTGAAAGTGCTAGAATT
1601 ACGGGCATGAGCCACCGCATCCAGCCAGAAAGATACATATCTAATTCTAGAAATAGCATGCAGTATCAGTCATAGTAACA
1681 GCCATGTGCTGACCTAAATAAAATTTCTTGATATTGTGTATTTAACCTGAAGTATTGAGCTAGTTTTTTTGTTTTGTTTT
1761 TTGGTGCTGAACATTTTGGTCTAATTCTTTGGCTTCTTAGAACATTTTAAAAAATCTATGTTTTGCTATCAGCCAAAGTA
1841 AATGTGTTCACACTAACATATAAGTTACTAACCTTCATTATACAGCAAAGCTAAAAAGTGGTGGGATATTTGGGGTCTTA
1921 ATGAAAATTGTATCATTTAATTCCATAAATATTAAAATATTTGGGTACCTTTTAAGCTTTTTTTCTTTCCTTCTATAATG
2001 GTGGTACAAGTTCTATATTCATTCAGTTTAATCTCATTTGAAATTGTTTAAATCAGAGTACATGTAAATATTTGTGGGTT
2081 TTTTTTTTTGGTTTATAGACTCGAGCTTTCCTTTTACACAGTTTTTTTTAGGGAAAAACTAAAGCTATTAGGAAATTCTA
2161 AATCTTGTTGATGAAGAGTTGGGCTTTCTTTGATATAATTAATAAAAGGGATGTATGGTATTTATGGCTGGGTAGGACCA
2241 GAAATGCACTTTGTATTACAGAGTGTTAAGGCTGGTTGCTATAGTATGGAACAGAAACACCTCTCCTTGGTCTCCCTAGT
2321 AATGGTTCAAGTTCTTCCCAGGAAGTCTTACATATTATAACTTTGTTCATTATCTTTCCCTTATAGCATCATTTTCCTTT
2401 TTGTAGAGTGGAAATCAGACTAGCTGCTAAACATATTAAGGTTAATCCTCCAGAAATGTACTGGGGAGGCATTTTAGTCA
2481 CAACAACTTACATTTGGCTTTGGAAGTTGTTAACAAAGCATAGTCGATGTTTTTAAATCAAACATAATTTGTATCTTGGA
2561 ACTTACATTTTGACATTTGAATAAAACAAAAAGACTAAATGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucggucGGUU-GAGUGUCACGUCu 5'
                |||| || | ||||||| 
Target 5' gctgtcCCAAGCTGA-AGTGCAGt 3'
981 - 1003 156.00 -15.30
2
miRNA  3' ucgguCGG--UUGAGUGUCACGUCu 5'
               ||:  |||||: || |||| 
Target 5' gaatcGCTTGAACTCGGAGGGCAGa 3'
656 - 680 132.00 -18.60
3
miRNA  3' ucGGUCGGUUGAGUGUCACGUCu 5'
            :|||||  | || ||||| | 
Target 5' ccTCAGCC-TCCCAAAGTGCTGg 3'
1192 - 1213 132.00 -18.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31598707 5 COSMIC
COSN31531533 7 COSMIC
COSN30657642 29 COSMIC
COSN20081805 35 COSMIC
COSN30153682 96 COSMIC
COSN30491442 105 COSMIC
COSN30170537 153 COSMIC
COSN30515842 200 COSMIC
COSN31545755 249 COSMIC
COSN31553764 250 COSMIC
COSN31568317 285 COSMIC
COSN31568049 359 COSMIC
COSN21566608 421 COSMIC
COSN22024248 550 COSMIC
COSN32149127 578 COSMIC
COSN6278132 776 COSMIC
COSN24912252 819 COSMIC
COSN1179015 1243 COSMIC
COSN15718063 1478 COSMIC
COSN29052125 2078 COSMIC
COSN27248098 2100 COSMIC
COSN25754530 2330 COSMIC
COSN21388526 2445 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1364126237 1 dbSNP
rs375348760 6 dbSNP
rs1042459848 7 dbSNP
rs771902132 10 dbSNP
rs201623357 12 dbSNP
rs778320231 13 dbSNP
rs915220663 15 dbSNP
rs757174098 18 dbSNP
rs749201029 22 dbSNP
rs1182983891 31 dbSNP
rs566610862 32 dbSNP
rs1267062718 34 dbSNP
rs777474164 39 dbSNP
rs1322144635 41 dbSNP
rs1283264383 42 dbSNP
rs762937599 42 dbSNP
rs755896226 44 dbSNP
rs961728075 46 dbSNP
rs1352740542 48 dbSNP
rs752543714 49 dbSNP
rs1403818520 50 dbSNP
rs1343043338 51 dbSNP
rs1310502748 52 dbSNP
rs984832291 63 dbSNP
rs958497177 64 dbSNP
rs1267460973 65 dbSNP
rs138843437 84 dbSNP
rs1003064151 90 dbSNP
rs1251192481 91 dbSNP
rs938054268 94 dbSNP
rs73475043 98 dbSNP
rs1020581330 106 dbSNP
rs759503919 110 dbSNP
rs1202125630 114 dbSNP
rs1302346313 115 dbSNP
rs567272403 135 dbSNP
rs961156382 149 dbSNP
rs749171896 150 dbSNP
rs550293779 151 dbSNP
rs1391613298 168 dbSNP
rs1448303168 170 dbSNP
rs114931353 177 dbSNP
rs569207573 178 dbSNP
rs952483868 187 dbSNP
rs1390091869 189 dbSNP
rs1343323852 191 dbSNP
rs552396503 192 dbSNP
rs1028099635 198 dbSNP
rs942666761 205 dbSNP
rs996906024 207 dbSNP
rs965109734 208 dbSNP
rs1019573210 215 dbSNP
rs867850478 216 dbSNP
rs1480267592 219 dbSNP
rs1009158449 224 dbSNP
rs773799392 225 dbSNP
rs1475354091 240 dbSNP
rs532577668 249 dbSNP
rs560268279 250 dbSNP
rs781494673 250 dbSNP
rs1170526720 257 dbSNP
rs1354526818 258 dbSNP
rs1177320664 259 dbSNP
rs1460898461 261 dbSNP
rs893882240 262 dbSNP
rs765916502 263 dbSNP
rs1414493091 285 dbSNP
rs1427512896 288 dbSNP
rs867285511 296 dbSNP
rs984494046 303 dbSNP
rs958598460 305 dbSNP
rs368299030 307 dbSNP
rs1034130070 308 dbSNP
rs981179140 309 dbSNP
rs376746728 313 dbSNP
rs971592783 317 dbSNP
rs1485890250 332 dbSNP
rs1186889597 338 dbSNP
rs1255042806 345 dbSNP
rs938008635 348 dbSNP
rs762310496 359 dbSNP
rs1418126238 381 dbSNP
rs1426175172 382 dbSNP
rs1463181038 384 dbSNP
rs1237827882 390 dbSNP
rs893401197 405 dbSNP
rs530104331 410 dbSNP
rs1362758061 412 dbSNP
rs1033654836 414 dbSNP
rs1269719758 415 dbSNP
rs1046711911 416 dbSNP
rs112243325 417 dbSNP
rs1327870241 418 dbSNP
rs1303338036 421 dbSNP
rs1348421666 436 dbSNP
rs561369024 443 dbSNP
rs889778234 452 dbSNP
rs192994387 456 dbSNP
rs879534696 458 dbSNP
rs908361926 464 dbSNP
rs983902374 468 dbSNP
rs575540282 469 dbSNP
rs772870723 473 dbSNP
rs1452431311 475 dbSNP
rs1404118471 482 dbSNP
rs111514945 485 dbSNP
rs375841039 493 dbSNP
rs909157773 501 dbSNP
rs985101729 504 dbSNP
rs184037264 513 dbSNP
rs1343598127 517 dbSNP
rs987697581 518 dbSNP
rs966931799 519 dbSNP
rs1326646081 528 dbSNP
rs1371699174 529 dbSNP
rs1233434199 543 dbSNP
rs1301108956 543 dbSNP
rs530364683 547 dbSNP
rs1224071130 551 dbSNP
rs1425452338 552 dbSNP
rs1021245708 556 dbSNP
rs1314757446 558 dbSNP
rs1223208906 570 dbSNP
rs1414503598 570 dbSNP
rs1011071261 574 dbSNP
rs894013278 578 dbSNP
rs1240516711 580 dbSNP
rs1470725297 583 dbSNP
rs1182694622 584 dbSNP
rs1459834743 587 dbSNP
rs1407269636 588 dbSNP
rs971144047 597 dbSNP
rs1393874170 604 dbSNP
rs550009810 606 dbSNP
rs1034140745 609 dbSNP
rs371255946 610 dbSNP
rs1278721380 613 dbSNP
rs1348164745 614 dbSNP
rs368058693 617 dbSNP
rs1046413182 622 dbSNP
rs940049792 623 dbSNP
rs1316381518 625 dbSNP
rs1211214217 626 dbSNP
rs1245651196 632 dbSNP
rs1275729007 634 dbSNP
rs1438897174 636 dbSNP
rs12909981 638 dbSNP
rs1231500854 644 dbSNP
rs1322746584 660 dbSNP
rs1048334691 661 dbSNP
rs1459942684 665 dbSNP
rs931107006 666 dbSNP
rs921112576 667 dbSNP
rs556966854 670 dbSNP
rs866732363 671 dbSNP
rs1333801868 676 dbSNP
rs1416346281 678 dbSNP
rs2946667 682 dbSNP
rs1354359084 685 dbSNP
rs772517358 687 dbSNP
rs1230997155 691 dbSNP
rs977070918 694 dbSNP
rs570871634 695 dbSNP
rs149146471 700 dbSNP
rs1271440663 713 dbSNP
rs1021214484 714 dbSNP
rs897265620 717 dbSNP
rs989734030 724 dbSNP
rs1004749815 725 dbSNP
rs190887919 727 dbSNP
rs1033866944 730 dbSNP
rs1475104337 731 dbSNP
rs1167289450 734 dbSNP
rs1002676983 740 dbSNP
rs564649753 741 dbSNP
rs566739252 744 dbSNP
rs906602350 749 dbSNP
rs546863344 750 dbSNP
rs1004164490 751 dbSNP
rs1488540019 752 dbSNP
rs1293059645 756 dbSNP
rs1222424500 767 dbSNP
rs1412502526 767 dbSNP
rs779223974 770 dbSNP
rs887151201 772 dbSNP
rs1326528240 781 dbSNP
rs1225986593 793 dbSNP
rs927197119 798 dbSNP
rs1350671368 805 dbSNP
rs1048262663 806 dbSNP
rs544657650 818 dbSNP
rs1280030481 824 dbSNP
rs899638256 832 dbSNP
rs1300267963 835 dbSNP
rs757374714 836 dbSNP
rs943897460 852 dbSNP
rs1446518123 862 dbSNP
rs912305973 870 dbSNP
rs988546049 874 dbSNP
rs1455523466 876 dbSNP
rs1293738695 882 dbSNP
rs145183802 886 dbSNP
rs1041526824 888 dbSNP
rs1174083788 892 dbSNP
rs945656513 896 dbSNP
rs1394282896 903 dbSNP
rs1388521034 904 dbSNP
rs1290279557 907 dbSNP
rs1385143876 910 dbSNP
rs914248790 911 dbSNP
rs989702932 918 dbSNP
rs1315593643 921 dbSNP
rs958334422 924 dbSNP
rs957601512 931 dbSNP
rs1032101676 933 dbSNP
rs1001995085 937 dbSNP
rs1366287695 940 dbSNP
rs530240453 942 dbSNP
rs780025910 945 dbSNP
rs1346199199 949 dbSNP
rs1422662596 959 dbSNP
rs985613116 962 dbSNP
rs1203530481 963 dbSNP
rs1216174673 963 dbSNP
rs1350226062 963 dbSNP
rs36113271 963 dbSNP
rs373084134 963 dbSNP
rs1168968985 964 dbSNP
rs1461315865 965 dbSNP
rs1452571747 966 dbSNP
rs1156342097 967 dbSNP
rs1396074877 967 dbSNP
rs1440945596 967 dbSNP
rs1325846535 970 dbSNP
rs1370944901 970 dbSNP
rs1200554431 980 dbSNP
rs186871537 981 dbSNP
rs926893789 984 dbSNP
rs1393573208 988 dbSNP
rs368275234 996 dbSNP
rs1308146466 1000 dbSNP
rs779069507 1001 dbSNP
rs1267545409 1008 dbSNP
rs954456155 1009 dbSNP
rs1031907991 1013 dbSNP
rs576084667 1018 dbSNP
rs866870846 1020 dbSNP
rs1272538000 1022 dbSNP
rs562581870 1024 dbSNP
rs1178778102 1026 dbSNP
rs951352390 1030 dbSNP
rs1026959101 1031 dbSNP
rs1179598761 1032 dbSNP
rs1006045359 1039 dbSNP
rs1461513439 1045 dbSNP
rs995934459 1046 dbSNP
rs1348709643 1049 dbSNP
rs899733975 1050 dbSNP
rs778171952 1059 dbSNP
rs1299140192 1072 dbSNP
rs1396270908 1075 dbSNP
rs1389968815 1079 dbSNP
rs1049373470 1081 dbSNP
rs1356328513 1085 dbSNP
rs1040059712 1092 dbSNP
rs1008058651 1093 dbSNP
rs1339139910 1094 dbSNP
rs1251770151 1096 dbSNP
rs890966564 1107 dbSNP
rs1249773187 1112 dbSNP
rs1001347222 1118 dbSNP
rs1480195693 1118 dbSNP
rs1259263224 1121 dbSNP
rs1475325477 1121 dbSNP
rs1346461887 1125 dbSNP
rs548842013 1128 dbSNP
rs1429735469 1129 dbSNP
rs1403233043 1135 dbSNP
rs1352205807 1137 dbSNP
rs1354393485 1142 dbSNP
rs1428290952 1143 dbSNP
rs945792534 1146 dbSNP
rs182092652 1153 dbSNP
rs1376345222 1160 dbSNP
rs1329497654 1167 dbSNP
rs545341725 1173 dbSNP
rs1304618587 1186 dbSNP
rs1436715028 1187 dbSNP
rs1350883836 1191 dbSNP
rs1318059250 1195 dbSNP
rs1399537862 1196 dbSNP
rs1414855951 1197 dbSNP
rs949727712 1204 dbSNP
rs1480167507 1207 dbSNP
rs1054105232 1209 dbSNP
rs1225975525 1210 dbSNP
rs1201921400 1213 dbSNP
rs1488920566 1218 dbSNP
rs573138394 1223 dbSNP
rs937033378 1224 dbSNP
rs926888702 1226 dbSNP
rs1486562704 1227 dbSNP
rs1380173032 1228 dbSNP
rs752597138 1231 dbSNP
rs1268721690 1232 dbSNP
rs1222783695 1234 dbSNP
rs1320856256 1236 dbSNP
rs866472496 1237 dbSNP
rs1186584977 1238 dbSNP
rs767702889 1239 dbSNP
rs1448179849 1240 dbSNP
rs918096523 1240 dbSNP
rs1267977578 1243 dbSNP
rs1052747760 1247 dbSNP
rs190271986 1251 dbSNP
rs1321851841 1252 dbSNP
rs542791403 1253 dbSNP
rs1469715864 1257 dbSNP
rs1404070717 1263 dbSNP
rs935758390 1267 dbSNP
rs542456323 1273 dbSNP
rs1431660025 1275 dbSNP
rs150494260 1286 dbSNP
rs986052881 1287 dbSNP
rs754661011 1296 dbSNP
rs1305488697 1304 dbSNP
rs1348357340 1314 dbSNP
rs556790405 1319 dbSNP
rs1451136678 1320 dbSNP
rs151312669 1323 dbSNP
rs796920369 1323 dbSNP
rs1202590906 1326 dbSNP
rs1324509658 1331 dbSNP
rs1262778514 1346 dbSNP
rs1463130527 1346 dbSNP
rs1221723007 1349 dbSNP
rs1254109553 1354 dbSNP
rs922887612 1355 dbSNP
rs1171182196 1357 dbSNP
rs1410513243 1359 dbSNP
rs1027054051 1361 dbSNP
rs995511996 1362 dbSNP
rs537104791 1363 dbSNP
rs976966029 1365 dbSNP
rs1374183954 1368 dbSNP
rs1193069718 1369 dbSNP
rs1386588785 1377 dbSNP
rs577241852 1379 dbSNP
rs1463037573 1381 dbSNP
rs1327862467 1382 dbSNP
rs16948525 1384 dbSNP
rs961397038 1386 dbSNP
rs1272831973 1391 dbSNP
rs1375125866 1395 dbSNP
rs1224022746 1406 dbSNP
rs557297537 1407 dbSNP
rs554079019 1412 dbSNP
rs1280009451 1417 dbSNP
rs751527170 1421 dbSNP
rs1018151790 1423 dbSNP
rs1015549126 1424 dbSNP
rs1274423350 1432 dbSNP
rs1441380330 1433 dbSNP
rs984103047 1434 dbSNP
rs1335906430 1436 dbSNP
rs1008570003 1438 dbSNP
rs1470696597 1441 dbSNP
rs1176864176 1448 dbSNP
rs890934762 1449 dbSNP
rs1020148442 1450 dbSNP
rs1165729318 1451 dbSNP
rs1395187063 1454 dbSNP
rs1404846775 1458 dbSNP
rs1404662083 1464 dbSNP
rs1334286926 1466 dbSNP
rs1033745794 1468 dbSNP
rs1001796987 1471 dbSNP
rs538980967 1475 dbSNP
rs1010097699 1480 dbSNP
rs1287325487 1487 dbSNP
rs1348238349 1492 dbSNP
rs566801397 1499 dbSNP
rs547218949 1506 dbSNP
rs1024261404 1512 dbSNP
rs1014183969 1514 dbSNP
rs1054649474 1515 dbSNP
rs937022348 1520 dbSNP
rs1157553249 1521 dbSNP
rs373454501 1528 dbSNP
rs777899320 1529 dbSNP
rs1204188957 1532 dbSNP
rs1045289298 1538 dbSNP
rs949654903 1539 dbSNP
rs1188792937 1547 dbSNP
rs1362615759 1553 dbSNP
rs1417282913 1555 dbSNP
rs918191377 1556 dbSNP
rs536433920 1557 dbSNP
rs756218836 1558 dbSNP
rs1462070064 1560 dbSNP
rs1307167911 1563 dbSNP
rs982898001 1567 dbSNP
rs932856620 1569 dbSNP
rs1313070719 1570 dbSNP
rs922772095 1571 dbSNP
rs1202023596 1575 dbSNP
rs1466467372 1587 dbSNP
rs1340657219 1596 dbSNP
rs535031010 1597 dbSNP
rs186517278 1601 dbSNP
rs1211893068 1602 dbSNP
rs141855533 1603 dbSNP
rs1440773634 1605 dbSNP
rs1243835082 1615 dbSNP
rs1285913063 1615 dbSNP
rs964044446 1616 dbSNP
rs147931273 1617 dbSNP
rs986712544 1626 dbSNP
rs1436306268 1627 dbSNP
rs955257543 1633 dbSNP
rs1173896985 1634 dbSNP
rs1400969525 1637 dbSNP
rs1312718457 1641 dbSNP
rs762479331 1655 dbSNP
rs1020242761 1657 dbSNP
rs1295977485 1658 dbSNP
rs1010066580 1663 dbSNP
rs1034207697 1665 dbSNP
rs1235392515 1674 dbSNP
rs1255694959 1682 dbSNP
rs1345460538 1686 dbSNP
rs1316989984 1688 dbSNP
rs749899766 1694 dbSNP
rs1285009887 1714 dbSNP
rs1398474140 1717 dbSNP
rs28452222 1740 dbSNP
rs1383388830 1751 dbSNP
rs1485503171 1751 dbSNP
rs1187882221 1756 dbSNP
rs551780048 1767 dbSNP
rs1455427417 1772 dbSNP
rs1445558753 1783 dbSNP
rs1199303548 1785 dbSNP
rs1376761814 1798 dbSNP
rs1464201698 1802 dbSNP
rs1384992227 1803 dbSNP
rs183276726 1809 dbSNP
rs1385075828 1810 dbSNP
rs572428337 1816 dbSNP
rs1319135983 1817 dbSNP
rs542868886 1818 dbSNP
rs1215103157 1826 dbSNP
rs1031571642 1828 dbSNP
rs775904800 1836 dbSNP
rs1291862284 1839 dbSNP
rs1223115131 1844 dbSNP
rs1358722430 1852 dbSNP
rs1000300767 1855 dbSNP
rs1261483168 1857 dbSNP
rs1312603872 1863 dbSNP
rs559093466 1868 dbSNP
rs896733082 1869 dbSNP
rs1266238492 1872 dbSNP
rs1269259936 1882 dbSNP
rs996552845 1897 dbSNP
rs1047339960 1903 dbSNP
rs1431179856 1915 dbSNP
rs1041208353 1919 dbSNP
rs1412162049 1920 dbSNP
rs563470181 1929 dbSNP
rs930105044 1932 dbSNP
rs1156298118 1940 dbSNP
rs940167367 1943 dbSNP
rs920095611 1945 dbSNP
rs974156627 1948 dbSNP
rs1293418419 1954 dbSNP
rs908810952 1958 dbSNP
rs942797871 1960 dbSNP
rs1393445735 1964 dbSNP
rs1307986479 1965 dbSNP
rs1350101865 1983 dbSNP
rs1425842317 1986 dbSNP
rs911334621 1989 dbSNP
rs1048626968 1993 dbSNP
rs1226717195 1993 dbSNP
rs1365554928 1995 dbSNP
rs1162037945 2001 dbSNP
rs1487384398 2013 dbSNP
rs547912620 2015 dbSNP
rs1197328953 2016 dbSNP
rs955394172 2030 dbSNP
rs931338797 2031 dbSNP
rs1020211796 2045 dbSNP
rs926640054 2055 dbSNP
rs1420407572 2059 dbSNP
rs1186155862 2074 dbSNP
rs1474581463 2076 dbSNP
rs1271132559 2078 dbSNP
rs1200278005 2079 dbSNP
rs1164710155 2082 dbSNP
rs1367169711 2083 dbSNP
rs988731158 2085 dbSNP
rs1309009148 2090 dbSNP
rs1314942070 2090 dbSNP
rs34741506 2090 dbSNP
rs751884936 2090 dbSNP
rs1356189695 2092 dbSNP
rs1227743350 2093 dbSNP
rs970816296 2098 dbSNP
rs1289533081 2102 dbSNP
rs1206980370 2121 dbSNP
rs1275049848 2121 dbSNP
rs1307866357 2122 dbSNP
rs1341147069 2127 dbSNP
rs917984093 2129 dbSNP
rs955847196 2130 dbSNP
rs992684766 2130 dbSNP
rs1271781360 2137 dbSNP
rs957160910 2146 dbSNP
rs1430792095 2148 dbSNP
rs1033275450 2152 dbSNP
rs1001396585 2153 dbSNP
rs1032042143 2155 dbSNP
rs1389967274 2157 dbSNP
rs543130118 2158 dbSNP
rs1212429691 2160 dbSNP
rs1428151907 2161 dbSNP
rs1175759709 2177 dbSNP
rs1000115677 2186 dbSNP
rs969002563 2188 dbSNP
rs1027994957 2196 dbSNP
rs970196807 2198 dbSNP
rs1403854751 2206 dbSNP
rs1437230328 2210 dbSNP
rs759765346 2212 dbSNP
rs900947171 2213 dbSNP
rs774946332 2230 dbSNP
rs1046125275 2233 dbSNP
rs1345386570 2239 dbSNP
rs886108411 2248 dbSNP
rs1324177077 2256 dbSNP
rs771304556 2263 dbSNP
rs1004366299 2264 dbSNP
rs1355461275 2281 dbSNP
rs1170268300 2287 dbSNP
rs1189785478 2292 dbSNP
rs1247876275 2293 dbSNP
rs1047269385 2303 dbSNP
rs1448117574 2305 dbSNP
rs1408392373 2324 dbSNP
rs994392585 2331 dbSNP
rs577303643 2351 dbSNP
rs370069854 2356 dbSNP
rs1431780629 2373 dbSNP
rs1426198667 2374 dbSNP
rs1414091849 2384 dbSNP
rs887273760 2387 dbSNP
rs1347061406 2389 dbSNP
rs1177178376 2406 dbSNP
rs1038926283 2408 dbSNP
rs942912956 2416 dbSNP
rs1480168918 2433 dbSNP
rs911289683 2435 dbSNP
rs1364371349 2436 dbSNP
rs1432710336 2439 dbSNP
rs1276376285 2445 dbSNP
rs1051222385 2450 dbSNP
rs77309008 2459 dbSNP
rs1232089839 2461 dbSNP
rs11174 2467 dbSNP
rs534315619 2472 dbSNP
rs913245581 2486 dbSNP
rs1268113015 2488 dbSNP
rs988701334 2492 dbSNP
rs1045109415 2505 dbSNP
rs573241156 2506 dbSNP
rs570122555 2522 dbSNP
rs925919854 2526 dbSNP
rs980334055 2527 dbSNP
rs1189707864 2530 dbSNP
rs1410357033 2532 dbSNP
rs1472999073 2534 dbSNP
rs553398280 2536 dbSNP
rs377130425 2547 dbSNP
rs191710803 2566 dbSNP
rs114205945 2573 dbSNP
rs1350264329 2574 dbSNP
rs1013966607 2577 dbSNP
rs1297940465 2587 dbSNP
rs1291495386 2590 dbSNP
rs1351931900 2591 dbSNP
rs1228520654 2592 dbSNP
rs1287122074 2595 dbSNP
rs1440492573 2600 dbSNP
rs1230550497 2605 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ucggucgguuGAGUGUCACGUCu 5'
                    || | ||||||| 
Target 5' ----------CUGA-AGUGCAGu 3'
1 - 12
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000300107.3 | 3UTR | CUGAAGUGCAGUGGUGCGAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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