pre-miRNA Information
pre-miRNA hsa-mir-640   
Genomic Coordinates chr19: 19435063 - 19435158
Synonyms MIRN640, hsa-mir-640, MIR640
Description Homo sapiens miR-640 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-640
Sequence 61| AUGAUCCAGGAACCUGCCUCU |81
Evidence Experimental
Experiments RT-PCR
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30153378 1 COSMIC
COSN23015356 12 COSMIC
COSN30513185 19 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs111726405 1 dbSNP
rs765622881 2 dbSNP
rs1249744889 6 dbSNP
rs752995186 12 dbSNP
rs758746736 13 dbSNP
rs918887970 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol F2R   
Synonyms CF2R, HTR, PAR-1, PAR1, TR
Description coagulation factor II thrombin receptor
Transcript NM_001992   
Expression
Putative miRNA Targets on F2R
3'UTR of F2R
(miRNA target sites are highlighted)
>F2R|NM_001992|3'UTR
   1 GAAAAGGGACTGCTGGGAGGTTAAAAAGAAAAGTTTATAAAAGTGAATAACCTGAGGATTCTATTAGTCCCCACCCAAAC
  81 TTTATTGATTCACCTCCTAAAACAACAGATGTACGACTTGCATACCTGCTTTTTATGGGAGCTGTCAAGCATGTATTTTT
 161 GTCAATTACCAGAAAGATAACAGGACGAGATGACGGTGTTATTCCAAGGGAATATTGCCAATGCTACAGTAATAAATGAA
 241 TGTCACTTCTGGATATAGCTAGGTGACATATACATACTTACATGTGTGTATATGTAGATGTATGCACACACATATATTAT
 321 TTGCAGTGCAGTATAGAATAGGCACTTTAAAACACTCTTTCCCCGCACCCCAGCAATTATGAAAATAATCTCTGATTCCC
 401 TGATTTAATATGCAAAGTCTAGGTTGGTAGAGTTTAGCCCTGAACATTTCATGGTGTTCATCAACAGTGAGAGACTCCAT
 481 AGTTTGGGCTTGTACCACTTTTGCAAATAAGTGTATTTTGAAATTGTTTGACGGCAAGGTTTAAGTTATTAAGAGGTAAG
 561 ACTTAGTACTATCTGTGCGTAGAAGTTCTAGTGTTTTCAATTTTAAACATATCCAAGTTTGAATTCCTAAAATTATGGAA
 641 ACAGATGAAAAGCCTCTGTTTTGATATGGGTAGTATTTTTTACATTTTACACACTGTACACATAAGCCAAAACTGAGCAT
 721 AAGTCCTCTAGTGAATGTAGGCTGGCTTTCAGAGTAGGCTATTCCTGAGAGCTGCATGTGTCCGCCCCCGATGGAGGACT
 801 CCAGGCAGCAGACACATGCCAGGGCCATGTCAGACACAGATTGGCCAGAAACCTTCCTGCTGAGCCTCACAGCAGTGAGA
 881 CTGGGGCCACTACATTTGCTCCATCCTCCTGGGATTGGCTGTGAACTGATCATGTTTATGAGAAACTGGCAAAGCAGAAT
 961 GTGATATCCTAGGAGGTAATGACCATGAAAGACTTCTCTACCCATCTTAAAAACAACGAAAGAAGGCATGGACTTCTGGA
1041 TGCCCATCCACTGGGTGTAAACACATCTAGTAGTTGTTCTGAAATGTCAGTTCTGATATGGAAGCACCCATTATGCGCTG
1121 TGGCCACTCCAATAGGTGCTGAGTGTACAGAGTGGAATAAGACAGAGACCTGCCCTCAAGAGCAAAGTAGATCATGCATA
1201 GAGTGTGATGTATGTGTAATAAATATGTTTCACACAAACAAGGCCTGTCAGCTAAAGAAGTTTGAACATTTGGGTTACTA
1281 TTTCTTGTGGTTATAACTTAATGAAAACAATGCAGTACAGGACATATATTTTTTAAAATAAGTCTGATTTAATTGGGCAC
1361 TATTTATTTACAAATGTTTTGCTCAATAGATTGCTCAAATCAGGTTTTCTTTTAAGAATCAATCATGTCAGTCTGCTTAG
1441 AAATAACAGAAGAAAATAGAATTGACATTGAAATCTAGGAAAATTATTCTATAATTTCCATTTACTTAAGACTTAATGAG
1521 ACTTTAAAAGCATTTTTTAACCTCCTAAGTATCAAGTATAGAAAATCTTCATGGAATTCACAAAGTAATTTGGAAATTAG
1601 GTTGAAACATATCTCTTATCTTACGAAAAAATGGTAGCATTTTAAACAAAATAGAAAGTTGCAAGGCAAATGTTTATTTA
1681 AAAGAGCAGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCACGAGGTCAG
1761 GAGATCGAGACCATCCTGGCTAACACGGTGAAACCCGTCTCTACTAAAAATGCAAAAAAAATTAGCCGGGCGTGGTGGCA
1841 GGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGACTGGCGTGAACCCAGGAGGCGGACCTTGTAGTGAGCCG
1921 AGATCGCGCCACTGTGCTCCAGCCTGGGCAACAGAGCAAGACTCCATCTCAAAAAATAAAAATAAATAAAAAATAAAAAA
2001 ATAAAAGAGCAAACTATTTCCAAATACCATAGAATAACTTACATAAAAGTAATATAACTGTATTGTAAGTAGAAGCTAGC
2081 ACTGGTTTTATTAATTTAGTGACTATTCATTTTATCTAAATCAGTGAAGATTTACTGTCATTGTTTATTAGTCTGTATAT
2161 ATTAAAATATGATATCATTAATGTACTTACAAAATAGTATGTCACTGTTTTTATGTTCATTCTTAAAAACATAACCTGTA
2241 TTAATAAATGTGAACATTTGCTTGGTATCTCTTTGGA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucUCCGUCCAAGGACCUAGUa 5'
            ||||:||    ||||||| 
Target 5' tgAGGCGGG----TGGATCAc 3'
1736 - 1752 157.00 -21.20
2
miRNA  3' ucUCCGU-CC-AAGGACCUAgua 5'
            ||||| ||  |:||||||   
Target 5' gaAGGCATGGACTTCTGGATgcc 3'
1022 - 1044 127.00 -17.12
3
miRNA  3' ucUCC-GUCCAAG-GACCUAGUa 5'
            ||| ||||  |  ||| ||| 
Target 5' gcAGGCCAGGCGCGGTGGCTCAc 3'
1686 - 1708 123.00 -11.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30520549 29 COSMIC
COSN7579947 44 COSMIC
COSN20086935 88 COSMIC
COSN30644586 93 COSMIC
COSN9957045 115 COSMIC
COSN26140248 135 COSMIC
COSN17181847 405 COSMIC
COSN25772257 534 COSMIC
COSN16353626 920 COSMIC
COSN16357591 930 COSMIC
COSN23150823 1117 COSMIC
COSN32058422 1164 COSMIC
COSN23995872 1194 COSMIC
COSN16236800 1525 COSMIC
COSN14942391 1619 COSMIC
COSN32188784 2009 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1325890921 5 dbSNP
rs1029509392 11 dbSNP
rs780116373 13 dbSNP
rs1266008685 18 dbSNP
rs371882526 21 dbSNP
rs1204949625 24 dbSNP
rs758362767 26 dbSNP
rs1263170262 29 dbSNP
rs777725871 30 dbSNP
rs768865391 34 dbSNP
rs746756476 37 dbSNP
rs760079347 38 dbSNP
rs780643564 40 dbSNP
rs376494894 44 dbSNP
rs2227800 45 dbSNP
rs1290004718 48 dbSNP
rs775176122 52 dbSNP
rs1394346295 53 dbSNP
rs151014270 62 dbSNP
rs1405337128 64 dbSNP
rs1454691445 66 dbSNP
rs1016530320 72 dbSNP
rs1233772417 83 dbSNP
rs1181079717 84 dbSNP
rs1358291366 85 dbSNP
rs140665593 86 dbSNP
rs967742054 104 dbSNP
rs1398958550 110 dbSNP
rs1242655573 119 dbSNP
rs1204384642 122 dbSNP
rs980444018 123 dbSNP
rs963205270 125 dbSNP
rs752798920 126 dbSNP
rs1033892691 130 dbSNP
rs763954114 140 dbSNP
rs751472124 142 dbSNP
rs1029028513 143 dbSNP
rs552152050 145 dbSNP
rs954750758 146 dbSNP
rs186599475 150 dbSNP
rs1381907252 152 dbSNP
rs1020520442 156 dbSNP
rs1317409681 162 dbSNP
rs1342870241 163 dbSNP
rs1240977816 176 dbSNP
rs371469192 178 dbSNP
rs1487448530 179 dbSNP
rs979011519 182 dbSNP
rs1160795226 188 dbSNP
rs919455506 190 dbSNP
rs1385147486 193 dbSNP
rs569367818 195 dbSNP
rs984926187 196 dbSNP
rs1413757321 199 dbSNP
rs548490232 202 dbSNP
rs1447773359 203 dbSNP
rs1286132179 208 dbSNP
rs916330854 219 dbSNP
rs1358712564 222 dbSNP
rs1315661985 227 dbSNP
rs909308433 234 dbSNP
rs943331678 237 dbSNP
rs1359283106 241 dbSNP
rs1378816823 247 dbSNP
rs1431066157 257 dbSNP
rs1039026226 270 dbSNP
rs767102995 275 dbSNP
rs1300499587 276 dbSNP
rs749869564 282 dbSNP
rs1313048375 286 dbSNP
rs933950803 291 dbSNP
rs755893650 298 dbSNP
rs1365273048 304 dbSNP
rs1164802905 323 dbSNP
rs1376884480 325 dbSNP
rs1051354862 329 dbSNP
rs886082729 332 dbSNP
rs1185970572 333 dbSNP
rs892340532 335 dbSNP
rs1373994149 338 dbSNP
rs1490126415 344 dbSNP
rs1393024582 349 dbSNP
rs1223742117 356 dbSNP
rs1305664083 358 dbSNP
rs1009726436 362 dbSNP
rs1043463861 365 dbSNP
rs779835348 366 dbSNP
rs1280983614 368 dbSNP
rs1403914721 374 dbSNP
rs568695638 377 dbSNP
rs1304105311 380 dbSNP
rs1459932032 392 dbSNP
rs1353263473 393 dbSNP
rs1033359585 396 dbSNP
rs556426580 411 dbSNP
rs569723649 412 dbSNP
rs755329288 414 dbSNP
rs1314130450 423 dbSNP
rs191397769 424 dbSNP
rs1008906435 428 dbSNP
rs1269381415 432 dbSNP
rs779322145 435 dbSNP
rs1020720907 438 dbSNP
rs183763206 446 dbSNP
rs372907246 448 dbSNP
rs187057192 452 dbSNP
rs1033256067 489 dbSNP
rs556564384 490 dbSNP
rs1180985104 495 dbSNP
rs1260655320 496 dbSNP
rs1236746124 499 dbSNP
rs964775858 500 dbSNP
rs1174652912 503 dbSNP
rs1426886961 513 dbSNP
rs1323770292 516 dbSNP
rs1470888287 520 dbSNP
rs576456187 533 dbSNP
rs748643980 534 dbSNP
rs542338855 539 dbSNP
rs772440377 540 dbSNP
rs917394638 546 dbSNP
rs756147509 550 dbSNP
rs1402610126 553 dbSNP
rs1174326201 554 dbSNP
rs933900621 557 dbSNP
rs879800461 559 dbSNP
rs1430226943 562 dbSNP
rs907542412 563 dbSNP
rs868205469 571 dbSNP
rs1177730077 572 dbSNP
rs1329296919 573 dbSNP
rs777948684 580 dbSNP
rs945192260 585 dbSNP
rs1461539038 611 dbSNP
rs1043598016 618 dbSNP
rs1236350895 621 dbSNP
rs1315540059 631 dbSNP
rs903577336 637 dbSNP
rs1241556013 638 dbSNP
rs1303373345 639 dbSNP
rs931843091 645 dbSNP
rs1370030874 653 dbSNP
rs1001983848 654 dbSNP
rs1452020791 657 dbSNP
rs111660890 671 dbSNP
rs1278010993 674 dbSNP
rs1308097711 676 dbSNP
rs1363065710 677 dbSNP
rs1159528362 680 dbSNP
rs896186414 689 dbSNP
rs1441545058 691 dbSNP
rs747088607 693 dbSNP
rs1383293540 699 dbSNP
rs1013677810 702 dbSNP
rs1256790163 708 dbSNP
rs1257611953 709 dbSNP
rs1026527178 710 dbSNP
rs1203030070 717 dbSNP
rs1485322796 720 dbSNP
rs554329048 727 dbSNP
rs113734071 729 dbSNP
rs1217789098 739 dbSNP
rs1194675740 749 dbSNP
rs1006313900 755 dbSNP
rs377230979 762 dbSNP
rs1476837727 764 dbSNP
rs1020333450 765 dbSNP
rs964745280 770 dbSNP
rs1314908939 773 dbSNP
rs974839321 784 dbSNP
rs758108065 785 dbSNP
rs1167879108 787 dbSNP
rs771201821 790 dbSNP
rs1000197474 791 dbSNP
rs1425169858 792 dbSNP
rs1033703697 795 dbSNP
rs865855371 806 dbSNP
rs989223086 814 dbSNP
rs34314266 815 dbSNP
rs1190391955 820 dbSNP
rs1327706031 828 dbSNP
rs1347835984 830 dbSNP
rs958956775 834 dbSNP
rs1013152254 842 dbSNP
rs1024482397 845 dbSNP
rs1274548473 845 dbSNP
rs776777444 851 dbSNP
rs535299274 853 dbSNP
rs1267380425 854 dbSNP
rs1225321103 874 dbSNP
rs1043567850 879 dbSNP
rs1220590947 883 dbSNP
rs982305045 893 dbSNP
rs1402037599 894 dbSNP
rs1276330422 895 dbSNP
rs907615765 900 dbSNP
rs962040399 904 dbSNP
rs777863192 905 dbSNP
rs973081569 919 dbSNP
rs925132590 933 dbSNP
rs540059283 935 dbSNP
rs41272244 940 dbSNP
rs1373109748 941 dbSNP
rs773993482 946 dbSNP
rs896227667 967 dbSNP
rs949056803 973 dbSNP
rs1214786758 975 dbSNP
rs532445928 976 dbSNP
rs1199148221 982 dbSNP
rs1047861955 985 dbSNP
rs761849970 986 dbSNP
rs1452756759 994 dbSNP
rs191179957 996 dbSNP
rs750007197 997 dbSNP
rs1016382602 1008 dbSNP
rs1194520000 1009 dbSNP
rs1338862516 1018 dbSNP
rs1221288230 1019 dbSNP
rs760202747 1030 dbSNP
rs1321636069 1031 dbSNP
rs1478584521 1039 dbSNP
rs182200038 1040 dbSNP
rs186981649 1045 dbSNP
rs1030379414 1049 dbSNP
rs954980124 1057 dbSNP
rs1326805886 1058 dbSNP
rs369580387 1065 dbSNP
rs1422237647 1068 dbSNP
rs1042232330 1090 dbSNP
rs988798998 1091 dbSNP
rs1467972225 1106 dbSNP
rs1428155720 1112 dbSNP
rs1000633032 1117 dbSNP
rs548336403 1118 dbSNP
rs1054480484 1127 dbSNP
rs1411521587 1133 dbSNP
rs1404623825 1134 dbSNP
rs1318694950 1136 dbSNP
rs1361471382 1146 dbSNP
rs1402033177 1160 dbSNP
rs1296422291 1168 dbSNP
rs894442622 1168 dbSNP
rs1459990661 1179 dbSNP
rs1013183495 1187 dbSNP
rs536801193 1189 dbSNP
rs966601064 1196 dbSNP
rs1346884876 1200 dbSNP
rs1277532199 1202 dbSNP
rs1024556146 1208 dbSNP
rs1233957835 1211 dbSNP
rs577274484 1213 dbSNP
rs1286533151 1219 dbSNP
rs527842551 1221 dbSNP
rs1404637132 1223 dbSNP
rs1334440009 1236 dbSNP
rs1415774349 1239 dbSNP
rs1354823484 1244 dbSNP
rs1228157903 1251 dbSNP
rs937788615 1253 dbSNP
rs990670457 1259 dbSNP
rs1157161538 1263 dbSNP
rs1439694428 1265 dbSNP
rs372229305 1274 dbSNP
rs766132440 1295 dbSNP
rs1442888020 1298 dbSNP
rs1236925599 1300 dbSNP
rs961832113 1303 dbSNP
rs1444308702 1312 dbSNP
rs1281966305 1320 dbSNP
rs949185062 1324 dbSNP
rs1261853135 1325 dbSNP
rs1354084411 1330 dbSNP
rs1311382354 1336 dbSNP
rs753504178 1343 dbSNP
rs1189019441 1344 dbSNP
rs1284254759 1352 dbSNP
rs1235708185 1361 dbSNP
rs557592863 1361 dbSNP
rs571049713 1361 dbSNP
rs2227801 1367 dbSNP
rs1158957353 1376 dbSNP
rs779386669 1378 dbSNP
rs1361524223 1388 dbSNP
rs2227802 1397 dbSNP
rs986043779 1399 dbSNP
rs1421763721 1402 dbSNP
rs1413213862 1410 dbSNP
rs1182511464 1415 dbSNP
rs1157138375 1416 dbSNP
rs942281192 1418 dbSNP
rs1193139348 1423 dbSNP
rs944565848 1428 dbSNP
rs1220228647 1431 dbSNP
rs1041538991 1433 dbSNP
rs1290053435 1438 dbSNP
rs924416858 1450 dbSNP
rs1396717516 1459 dbSNP
rs1336220615 1461 dbSNP
rs1037886016 1463 dbSNP
rs17568523 1468 dbSNP
rs1801719 1469 dbSNP
rs894514737 1477 dbSNP
rs1030930229 1487 dbSNP
rs1349791668 1491 dbSNP
rs890533568 1492 dbSNP
rs759010909 1513 dbSNP
rs1417418939 1517 dbSNP
rs1020282767 1519 dbSNP
rs1238414123 1523 dbSNP
rs2227803 1527 dbSNP
rs1348121335 1531 dbSNP
rs555415377 1532 dbSNP
rs1478259027 1541 dbSNP
rs572209910 1552 dbSNP
rs1197010291 1558 dbSNP
rs1201727727 1562 dbSNP
rs1488150312 1567 dbSNP
rs1247219613 1570 dbSNP
rs1223620819 1575 dbSNP
rs1253404988 1591 dbSNP
rs1256843400 1592 dbSNP
rs146680313 1597 dbSNP
rs376561509 1598 dbSNP
rs1280551400 1609 dbSNP
rs1319548796 1609 dbSNP
rs778130003 1613 dbSNP
rs575436918 1614 dbSNP
rs747106984 1614 dbSNP
rs1367265701 1615 dbSNP
rs1182360302 1618 dbSNP
rs1239917039 1620 dbSNP
rs1439168056 1621 dbSNP
rs533698594 1625 dbSNP
rs1330728691 1626 dbSNP
rs898617850 1626 dbSNP
rs1426035992 1632 dbSNP
rs1174475345 1634 dbSNP
rs994602293 1657 dbSNP
rs1379970757 1665 dbSNP
rs959289362 1677 dbSNP
rs1192900487 1680 dbSNP
rs557824052 1690 dbSNP
rs182799626 1691 dbSNP
rs1479599600 1692 dbSNP
rs990652213 1697 dbSNP
rs1174417669 1699 dbSNP
rs917763843 1700 dbSNP
rs1260867292 1702 dbSNP
rs1208943040 1704 dbSNP
rs1801718 1708 dbSNP
rs546104054 1709 dbSNP
rs1332699200 1710 dbSNP
rs562326391 1723 dbSNP
rs1308697462 1724 dbSNP
rs1447630755 1726 dbSNP
rs543727790 1729 dbSNP
rs1379758447 1734 dbSNP
rs985741452 1737 dbSNP
rs1334993977 1740 dbSNP
rs369278664 1742 dbSNP
rs1037350053 1743 dbSNP
rs1177958976 1746 dbSNP
rs1417301623 1748 dbSNP
rs922161933 1753 dbSNP
rs1179101830 1756 dbSNP
rs932265199 1757 dbSNP
rs975314820 1758 dbSNP
rs1234915148 1762 dbSNP
rs1051920854 1766 dbSNP
rs867426718 1767 dbSNP
rs1010411506 1768 dbSNP
rs1212669662 1772 dbSNP
rs1351891967 1779 dbSNP
rs1241444234 1785 dbSNP
rs768733633 1785 dbSNP
rs1259961627 1787 dbSNP
rs1456368693 1788 dbSNP
rs1395732831 1797 dbSNP
rs1042154170 1798 dbSNP
rs904626123 1801 dbSNP
rs541851864 1802 dbSNP
rs1304744611 1812 dbSNP
rs1359612548 1814 dbSNP
rs924477824 1814 dbSNP
rs546054294 1815 dbSNP
rs935826727 1822 dbSNP
rs1421422394 1824 dbSNP
rs1034377321 1828 dbSNP
rs564022321 1829 dbSNP
rs1424091051 1830 dbSNP
rs1012615629 1832 dbSNP
rs1024799827 1833 dbSNP
rs1262891404 1836 dbSNP
rs1376117074 1838 dbSNP
rs2227805 1841 dbSNP
rs1356458332 1843 dbSNP
rs1263813666 1844 dbSNP
rs983309240 1845 dbSNP
rs781232421 1848 dbSNP
rs536496348 1853 dbSNP
rs747662334 1855 dbSNP
rs1298554130 1863 dbSNP
rs1339652843 1863 dbSNP
rs1401844227 1864 dbSNP
rs1388473727 1865 dbSNP
rs548010162 1867 dbSNP
rs1457976091 1868 dbSNP
rs948731406 1871 dbSNP
rs1045777124 1874 dbSNP
rs907608749 1880 dbSNP
rs1464479658 1884 dbSNP
rs564731022 1888 dbSNP
rs1391832214 1889 dbSNP
rs963113996 1890 dbSNP
rs1388872751 1897 dbSNP
rs372812623 1898 dbSNP
rs377070938 1903 dbSNP
rs932250204 1904 dbSNP
rs550416761 1907 dbSNP
rs2227806 1908 dbSNP
rs1278669788 1910 dbSNP
rs1220251087 1912 dbSNP
rs1329072445 1913 dbSNP
rs570275605 1916 dbSNP
rs1027384601 1919 dbSNP
rs1387254853 1921 dbSNP
rs888851574 1924 dbSNP
rs946182655 1926 dbSNP
rs188268346 1927 dbSNP
rs774268507 1928 dbSNP
rs904595088 1929 dbSNP
rs1207838676 1934 dbSNP
rs966064497 1935 dbSNP
rs1265586694 1944 dbSNP
rs1000302704 1945 dbSNP
rs1198841416 1950 dbSNP
rs1451233660 1953 dbSNP
rs1434231520 1980 dbSNP
rs1269647566 1984 dbSNP
rs977399136 1984 dbSNP
rs1032002788 1988 dbSNP
rs1457327822 1988 dbSNP
rs957249405 1989 dbSNP
rs1055798947 1993 dbSNP
rs1273996657 1995 dbSNP
rs1332744824 1995 dbSNP
rs1369544375 1995 dbSNP
rs915716003 1996 dbSNP
rs948798346 1997 dbSNP
rs981487566 1998 dbSNP
rs1412375705 1999 dbSNP
rs894512771 1999 dbSNP
rs1172359183 2002 dbSNP
rs940010042 2002 dbSNP
rs1478678374 2003 dbSNP
rs1397448614 2004 dbSNP
rs1292124596 2006 dbSNP
rs1014263139 2007 dbSNP
rs1238817703 2008 dbSNP
rs1180789644 2027 dbSNP
rs1440905044 2030 dbSNP
rs1277726034 2042 dbSNP
rs1389595690 2043 dbSNP
rs1200835439 2046 dbSNP
rs1400185803 2051 dbSNP
rs1025274573 2054 dbSNP
rs1299501349 2059 dbSNP
rs149407515 2061 dbSNP
rs1239273849 2066 dbSNP
rs1005096465 2072 dbSNP
rs931511021 2076 dbSNP
rs1445449549 2081 dbSNP
rs1055222 2082 dbSNP
rs1014742407 2083 dbSNP
rs963079807 2087 dbSNP
rs1323400579 2101 dbSNP
rs565825695 2102 dbSNP
rs1242408138 2104 dbSNP
rs1334343795 2104 dbSNP
rs889928455 2106 dbSNP
rs796440284 2110 dbSNP
rs747878235 2117 dbSNP
rs534837182 2119 dbSNP
rs901548013 2127 dbSNP
rs921595989 2130 dbSNP
rs553660811 2136 dbSNP
rs1160357337 2140 dbSNP
rs998906987 2145 dbSNP
rs1237123929 2148 dbSNP
rs1031614397 2158 dbSNP
rs1486540228 2161 dbSNP
rs1260733116 2163 dbSNP
rs574272329 2169 dbSNP
rs953129389 2172 dbSNP
rs1011474476 2174 dbSNP
rs577000097 2184 dbSNP
rs1354963511 2187 dbSNP
rs1284457657 2189 dbSNP
rs1449705333 2203 dbSNP
rs1055227 2205 dbSNP
rs539270072 2207 dbSNP
rs1357814734 2208 dbSNP
rs1022809710 2211 dbSNP
rs1361748131 2231 dbSNP
rs543275531 2231 dbSNP
rs981559567 2234 dbSNP
rs1419943425 2237 dbSNP
rs1413100456 2243 dbSNP
rs928710861 2245 dbSNP
rs1476290830 2250 dbSNP
rs1421299823 2251 dbSNP
rs961426342 2261 dbSNP
rs973132787 2265 dbSNP
rs919909811 2266 dbSNP
rs1219233061 2268 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1015449. RNA binding protein: AGO2. Condition:BC-3 mRNA ...

- Haecker I; Gay LA; Yang Y; Hu J; Morse AM; et al., 2012, PLoS pathogens.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ucUCCGUCCAAGGACCUAGUa 5'
            ||||:||    ||||||| 
Target 5' ugAGGCGGG----UGGAUCAc 3'
6 - 22
Article - Haecker I; Gay LA; Yang Y; Hu J; Morse AM; et al.
- PLoS pathogens, 2012
KSHV is the etiological agent of Kaposi's sarcoma (KS), primary effusion lymphoma (PEL), and a subset of multicentricCastleman's disease (MCD). The fact that KSHV-encoded miRNAs are readily detectable in all KSHV-associated tumors suggests a potential role in viral pathogenesis and tumorigenesis. MiRNA-mediated regulation of gene expression is a complex network with each miRNA having many potential targets, and to date only few KSHV miRNA targets have been experimentally determined. A detailed understanding of KSHV miRNA functions requires high-through putribonomics to globally analyze putative miRNA targets in a cell type-specific manner. We performed Ago HITS-CLIP to identify viral and cellular miRNAs and their cognate targets in two latently KSHV-infected PEL cell lines. Ago HITS-CLIP recovered 1170 and 950 cellular KSHV miRNA targets from BCBL-1 and BC-3, respectively. Importantly, enriched clusters contained KSHV miRNA seed matches in the 3'UTRs of numerous well characterized targets, among them THBS1, BACH1, and C/EBPbeta. KSHV miRNA targets were strongly enriched for genes involved in multiple pathways central for KSHV biology, such as apoptosis, cell cycle regulation, lymphocyte proliferation, and immune evasion, thus further supporting a role in KSHV pathogenesis and potentially tumorigenesis. A limited number of viral transcripts were also enriched by HITS-CLIP including vIL-6 expressed only in a subset of PEL cells during latency. Interestingly, Ago HITS-CLIP revealed extremely high levels of Ago-associated KSHV miRNAs especially in BC-3 cells where more than 70% of all miRNAs are of viral origin. This suggests that in addition to seed match-specific targeting of cellular genes, KSHV miRNAs may also function by hijacking RISCs, thereby contributing to a global de-repression of cellular gene expression due to the loss of regulation by human miRNAs. In summary, we provide an extensive list of cellular and viral miRNA targets representing an important resource to decipher KSHV miRNA function.
LinkOut: [PMID: 22927820]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_001992 | 3UTR | CUUUGGGAGGCUGAGGCGGGUGGAUCACGAGGUCAGGAGAUCGAGACCAUCCUGGCUAACACGGUGAAACCCGUCUCUACUAAAAAUGCAAAAAAAAUUAGCCGGGCGUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_001992 | 3UTR | GCACUUUGGGAGGCUGAGGCGGGUGGAUCACG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_001992 | 3UTR | CUGUAAUCCCAGCACUUUGGGAGGCUGAGGCGGGUGGAUCACG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1015449
Method / RBP HITS-CLIP / AGO2
Cell line / Condition BC-3 / BC-3 mRNA
Location of target site ENST00000319211.4 | 3UTR | GAGGCUGAGGCGGGUGGAUCACGAGGUCAGGAGAUCGAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22927820 / GSE41357
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28544 Breast cancer 0.551 2.6e-3 0.480 8.8e-3 24 Click to see details
GSE19783 ER+ ER+ breast cancer -0.434 2.8e-2 -0.179 2.3e-1 20 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.376 3.2e-2 0.290 8.0e-2 25 Click to see details
GSE32688 Pancreatic cancer -0.32 3.7e-2 -0.358 2.2e-2 32 Click to see details
GSE19783 ER- ER- breast cancer 0.174 6.3e-2 0.146 1.0e-1 79 Click to see details
GSE27834 Pluripotent stem cells 0.285 1.4e-1 0.274 1.5e-1 16 Click to see details
GSE28260 Renal cortex and medulla 0.299 1.6e-1 0.023 4.7e-1 13 Click to see details
GSE38226 Liver fibrosis -0.203 1.9e-1 -0.046 4.2e-1 21 Click to see details
GSE21849 B cell lymphoma 0.15 2.2e-1 0.514 2.2e-3 29 Click to see details
GSE26953 Aortic valvular endothelial cells -0.159 2.3e-1 -0.003 4.9e-1 24 Click to see details
GSE14794 Lymphoblastoid cells -0.065 2.7e-1 -0.098 1.8e-1 90 Click to see details
GSE17306 Multiple myeloma 0.085 2.8e-1 0.188 9.8e-2 49 Click to see details
GSE19536 Breast cancer 0.057 2.9e-1 0.030 3.8e-1 100 Click to see details
GSE42095 Differentiated embryonic stem cells 0.121 2.9e-1 0.000 5.0e-1 23 Click to see details
GSE19350 CNS germ cell tumors -0.136 3.4e-1 0.259 2.1e-1 12 Click to see details
GSE17498 Multiple myeloma -0.044 3.9e-1 -0.081 3.1e-1 40 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.045 4.2e-1 -0.016 4.7e-1 25 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.046 4.2e-1 -0.308 9.3e-2 20 Click to see details
GSE21687 Ependynoma primary tumors -0.013 4.6e-1 0.010 4.7e-1 64 Click to see details
GSE21687 Ependynoma primary tumors -0.013 4.6e-1 0.010 4.7e-1 64 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
194 hsa-miR-640 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT097121 TNPO1 transportin 1 2 2
MIRT115090 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 4
MIRT204603 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT204634 MOB4 MOB family member 4, phocein 2 8
MIRT344451 MTRNR2L1 MT-RNR2-like 1 2 2
MIRT405772 EIF5 eukaryotic translation initiation factor 5 2 2
MIRT445876 SENP6 SUMO1/sentrin specific peptidase 6 2 2
MIRT497418 FAM46A family with sequence similarity 46 member A 2 2
MIRT504394 HMX2 H6 family homeobox 2 2 4
MIRT504691 SLCO2B1 solute carrier organic anion transporter family member 2B1 2 8
MIRT512386 MTRNR2L3 MT-RNR2-like 3 2 6
MIRT513003 MAN1A2 mannosidase alpha class 1A member 2 2 2
MIRT513084 USP9X ubiquitin specific peptidase 9, X-linked 2 2
MIRT519122 ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 2 2
MIRT523836 F2RL1 F2R like trypsin receptor 1 2 2
MIRT565356 TMCC1 transmembrane and coiled-coil domain family 1 2 2
MIRT575895 Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease 2 3
MIRT576894 Poteg POTE ankyrin domain family, member G 2 2
MIRT613780 RPS6 ribosomal protein S6 2 2
MIRT613934 POLR3A RNA polymerase III subunit A 2 2
MIRT614348 LOH12CR1 BLOC-1 related complex subunit 5 2 2
MIRT614534 NOA1 nitric oxide associated 1 2 2
MIRT617019 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT618247 MANEAL mannosidase endo-alpha like 2 2
MIRT619051 TTC4 tetratricopeptide repeat domain 4 2 2
MIRT619442 ZNF517 zinc finger protein 517 2 2
MIRT619723 FPR2 formyl peptide receptor 2 2 2
MIRT620179 TRIM72 tripartite motif containing 72 2 2
MIRT620370 ANKRD62 ankyrin repeat domain 62 2 2
MIRT621263 RTN2 reticulon 2 2 2
MIRT621463 APOH apolipoprotein H 2 2
MIRT621571 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT621683 TSPYL1 TSPY like 1 2 2
MIRT622866 PDE7A phosphodiesterase 7A 2 2
MIRT624669 ARHGEF39 Rho guanine nucleotide exchange factor 39 2 2
MIRT625607 ZNF84 zinc finger protein 84 2 2
MIRT626111 IL23R interleukin 23 receptor 2 2
MIRT628380 CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 2 2
MIRT628553 MELK maternal embryonic leucine zipper kinase 2 2
MIRT628671 C2orf72 chromosome 2 open reading frame 72 2 2
MIRT628747 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT628776 TMEM154 transmembrane protein 154 2 2
MIRT628918 ZNF430 zinc finger protein 430 2 2
MIRT629174 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT629209 C12orf66 chromosome 12 open reading frame 66 2 2
MIRT629267 SLC5A8 solute carrier family 5 member 8 2 2
MIRT629498 AS3MT arsenite methyltransferase 2 2
MIRT629665 USP1 ubiquitin specific peptidase 1 2 2
MIRT629760 STK25 serine/threonine kinase 25 2 2
MIRT630899 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT631105 SLC15A2 solute carrier family 15 member 2 2 2
MIRT631112 ATCAY ATCAY, caytaxin 2 2
MIRT631450 DLEU1 deleted in lymphocytic leukemia 1 (non-protein coding) 2 2
MIRT631505 FFAR4 free fatty acid receptor 4 2 2
MIRT631580 ITGAL integrin subunit alpha L 2 2
MIRT631836 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT632342 SWSAP1 SWIM-type zinc finger 7 associated protein 1 2 2
MIRT633214 ZNF584 zinc finger protein 584 2 2
MIRT633223 ZNF43 zinc finger protein 43 2 2
MIRT633480 ARIH2OS ariadne RBR E3 ubiquitin protein ligase 2 opposite strand 2 2
MIRT633511 LRRC27 leucine rich repeat containing 27 2 2
MIRT633615 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT633652 SLC28A1 solute carrier family 28 member 1 2 2
MIRT633677 ZNF576 zinc finger protein 576 2 2
MIRT634196 TMOD2 tropomodulin 2 2 4
MIRT634388 PLSCR1 phospholipid scramblase 1 2 2
MIRT635817 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT635962 TTC31 tetratricopeptide repeat domain 31 2 2
MIRT636114 YPEL1 yippee like 1 2 2
MIRT636164 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT636768 CLUAP1 clusterin associated protein 1 2 2
MIRT637092 CXorf23 BCLAF1 and THRAP3 family member 3 2 2
MIRT637316 FAM9B family with sequence similarity 9 member B 2 2
MIRT637540 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT637628 ZNF431 zinc finger protein 431 2 2
MIRT637826 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT637945 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT637968 IRF1 interferon regulatory factor 1 2 2
MIRT638321 RNF11 ring finger protein 11 2 2
MIRT638386 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT639244 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT642608 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT642793 SLC1A5 solute carrier family 1 member 5 2 2
MIRT643847 LACTB lactamase beta 2 4
MIRT644705 ZNF321P zinc finger protein 321, pseudogene 2 2
MIRT645148 DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease 2 3
MIRT646671 CCDC69 coiled-coil domain containing 69 2 2
MIRT647780 ASB8 ankyrin repeat and SOCS box containing 8 2 2
MIRT648554 WDR92 WD repeat domain 92 2 2
MIRT648990 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT649099 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT650141 ZNF426 zinc finger protein 426 2 2
MIRT650791 GSR glutathione-disulfide reductase 2 2
MIRT654967 PLEKHA2 pleckstrin homology domain containing A2 2 2
MIRT655099 PHLDA3 pleckstrin homology like domain family A member 3 2 2
MIRT655516 PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 2 2
MIRT656289 METTL14 methyltransferase like 14 2 2
MIRT656497 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT657074 JPH2 junctophilin 2 2 2
MIRT657314 HOOK3 hook microtubule tethering protein 3 2 2
MIRT657419 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 2 4
MIRT659032 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT659535 CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 2 2
MIRT661532 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT662029 FUT2 fucosyltransferase 2 2 2
MIRT663206 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT663357 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT663557 CCR6 C-C motif chemokine receptor 6 2 2
MIRT663650 POLM DNA polymerase mu 2 2
MIRT663694 ABHD17B abhydrolase domain containing 17B 2 2
MIRT664370 CYB5A cytochrome b5 type A 2 2
MIRT664783 LIAS lipoic acid synthetase 2 4
MIRT665561 TXNL1 thioredoxin like 1 2 2
MIRT665950 TAOK1 TAO kinase 1 2 2
MIRT667338 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT667804 ITIH5 inter-alpha-trypsin inhibitor heavy chain family member 5 2 2
MIRT668804 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT669470 ARPC2 actin related protein 2/3 complex subunit 2 2 2
MIRT669599 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT669806 STOML1 stomatin like 1 2 2
MIRT669944 FBXL2 F-box and leucine rich repeat protein 2 2 2
MIRT670292 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670381 EMP2 epithelial membrane protein 2 2 2
MIRT670481 DCUN1D2 defective in cullin neddylation 1 domain containing 2 2 2
MIRT670531 KIF1C kinesin family member 1C 2 4
MIRT670565 GLTP glycolipid transfer protein 2 2
MIRT670603 NPHP1 nephrocystin 1 2 2
MIRT670880 CYTIP cytohesin 1 interacting protein 2 2
MIRT670931 LIPG lipase G, endothelial type 2 2
MIRT671261 MTRNR2L5 MT-RNR2-like 5 2 2
MIRT671794 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT671897 GBP4 guanylate binding protein 4 2 2
MIRT672000 SLC35F6 solute carrier family 35 member F6 2 4
MIRT672074 KIR3DX1 killer cell immunoglobulin like receptor, three Ig domains X1 2 2
MIRT672319 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT672853 C22orf29 retrotransposon Gag like 10 2 2
MIRT673395 WNT7B Wnt family member 7B 2 2
MIRT673537 DEGS1 delta 4-desaturase, sphingolipid 1 2 2
MIRT674285 ZNF724P zinc finger protein 724 2 2
MIRT674494 TIRAP TIR domain containing adaptor protein 2 2
MIRT675460 NUBPL nucleotide binding protein like 2 2
MIRT675569 TRIP11 thyroid hormone receptor interactor 11 2 2
MIRT676068 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT676254 PBOV1 prostate and breast cancer overexpressed 1 2 2
MIRT676377 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676758 SNX2 sorting nexin 2 2 2
MIRT676773 NPHS1 NPHS1, nephrin 2 2
MIRT676874 ENSA endosulfine alpha 2 2
MIRT676918 KLHDC8A kelch domain containing 8A 2 2
MIRT676944 S1PR3 sphingosine-1-phosphate receptor 3 2 2
MIRT676957 HFE hemochromatosis 2 2
MIRT676967 RNF19B ring finger protein 19B 2 2
MIRT676972 ZNF708 zinc finger protein 708 2 2
MIRT677042 ZNF34 zinc finger protein 34 2 2
MIRT677070 VMAC vimentin type intermediate filament associated coiled-coil protein 2 2
MIRT677093 MFSD11 major facilitator superfamily domain containing 11 2 4
MIRT677134 P2RX7 purinergic receptor P2X 7 2 2
MIRT677179 ZNF786 zinc finger protein 786 2 2
MIRT677228 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT677320 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT677455 PDLIM3 PDZ and LIM domain 3 2 2
MIRT677809 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT677937 ZNF519 zinc finger protein 519 2 2
MIRT678063 UBN2 ubinuclein 2 2 4
MIRT678072 EIF2A eukaryotic translation initiation factor 2A 2 2
MIRT678252 FXN frataxin 2 2
MIRT678315 FBLIM1 filamin binding LIM protein 1 2 2
MIRT678367 XIAP X-linked inhibitor of apoptosis 2 4
MIRT678372 RNF115 ring finger protein 115 2 2
MIRT678410 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678518 ZNF347 zinc finger protein 347 2 2
MIRT678566 CDK4 cyclin dependent kinase 4 2 2
MIRT678580 PPP1R3B protein phosphatase 1 regulatory subunit 3B 2 2
MIRT678820 PDE6A phosphodiesterase 6A 2 2
MIRT678917 XPOT exportin for tRNA 2 2
MIRT679217 MAN2A2 mannosidase alpha class 2A member 2 2 2
MIRT679437 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT679595 HILPDA hypoxia inducible lipid droplet associated 2 2
MIRT679755 TLR6 toll like receptor 6 2 2
MIRT679800 APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A 2 2
MIRT680057 CD96 CD96 molecule 2 2
MIRT680116 CCDC30 coiled-coil domain containing 30 2 4
MIRT680181 ZNF554 zinc finger protein 554 2 2
MIRT680439 WDR12 WD repeat domain 12 2 2
MIRT680789 ZNF578 zinc finger protein 578 2 2
MIRT692464 APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 2 2
MIRT702952 HIP1 huntingtin interacting protein 1 2 2
MIRT706016 ZSCAN2 zinc finger and SCAN domain containing 2 2 2
MIRT706032 F2R coagulation factor II thrombin receptor 2 2
MIRT706135 MTRNR2L10 MT-RNR2-like 10 2 2
MIRT706394 HAS2 hyaluronan synthase 2 2 2
MIRT713293 DCP2 decapping mRNA 2 2 2
MIRT716583 BRAP BRCA1 associated protein 2 2
MIRT720433 C19orf47 chromosome 19 open reading frame 47 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-640 Paclitaxel 36314 NSC125973 approved resistant High Ovarian Cancer tissue and cell line (SKOV3)
hsa-miR-640 Cetuximab resistant High Colon Cancer cell line
hsa-miR-640 Trametinib 11707110 NSC758246 approved resistant High Melanoma cell line (WM266) (1uM)
hsa-miR-640 Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (WM266) (1uM)
hsa-miR-640 Mitoxantrone 4212 NSC279836 approved resistant High Breast Cancer cell line (BT-20, BT-474, BT-549, CAMA-1, HCC1143, HCC1395, HCC1569, HCC1806, HCC-1937, HCC1954, HCC202, HCC38, HCC70, Hs578T, MCF-7, MDA-MB-175VII, MDA-MB-231, MDA-MB-361, MDA-MB-415, MDA-MB-436, MDA-MB-468, SKBR3, T47D, UACC812, EVSA-T, MPE-600 , SK-BR-
hsa-miR-640 Sorafenib 216239 NSC747971 approved sensitive Low Clear Cell Renal Cell Carcinoma cell line (786-O)
hsa-mir-640 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-mir-640 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-mir-640 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-640 Sunitinib 5329102 NSC750690 approved resistant tissue (CardB)
hsa-miR-640 Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-640 Tamoxifen 2733525 NSC180973 approved sensitive cell line (TamR8)
hsa-miR-640 Oxaliplatin 6857599 NSC266046 approved sensitive cell line (IGROV-1)
hsa-miR-640 Cisplatin 5460033 NSC119875 approved sensitive cell line (IGROV-1)
hsa-miR-640 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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