pre-miRNA Information
pre-miRNA hsa-mir-4433a   
Genomic Coordinates chr2: 64340759 - 64340839
Description Homo sapiens miR-4433a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4433a-3p
Sequence 51| ACAGGAGUGGGGGUGGGACAU |71
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs751480515 9 dbSNP
rs557760377 15 dbSNP
rs1479580865 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol EIF2AK2   
Synonyms EIF2AK1, PKR, PPP1R83, PRKR
Description eukaryotic translation initiation factor 2 alpha kinase 2
Transcript NM_001135651   
Other Transcripts NM_001135652 , NM_002759   
Expression
Putative miRNA Targets on EIF2AK2
3'UTR of EIF2AK2
(miRNA target sites are highlighted)
>EIF2AK2|NM_001135651|3'UTR
   1 AGCCCTTCTGAAAAAGTATCCTGCTTCTGATATGCAGTTTTCCTTAAATTATCTAAAATCTGCTAGGGAATATCAATAGA
  81 TATTTACCTTTTATTTTAATGTTTCCTTTAATTTTTTACTATTTTTACTAATCTTTCTGCAGAAACAGAAAGGTTTTCTT
 161 CTTTTTGCTTCAAAAACATTCTTACATTTTACTTTTTCCTGGCTCATCTCTTTATTCTTTTTTTTTTTTTAAAGACAGAG
 241 TCTCGCTCTGTTGCCCAGGCTGGAGTGCAATGACACAGTCTTGGCTCACTGCAACTTCTGCCTCTTGGGTTCAAGTGATT
 321 CTCCTGCCTCAGCCTCCTGAGTAGCTGGATTACAGGCATGTGCCACCCACCCAACTAATTTTTGTGTTTTTAATAAAGAC
 401 AGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTAATCCACCTGCCTCGGCCTCCCAAAGTGCTG
 481 GGATTACAGGGATGAGCCACCGCGCCCAGCCTCATCTCTTTGTTCTAAAGATGGAAAAACCACCCCCAAATTTTCTTTTT
 561 ATACTATTAATGAATCAATCAATTCATATCTATTTATTAAATTTCTACCGCTTTTAGGCCAAAAAAATGTAAGATCGTTC
 641 TCTGCCTCACATAGCTTACAAGCCAGCTGGAGAAATATGGTACTCATTAAAAAAAAAAAAAAAAGTGATGTACAACCACT
 721 TCGGAAAACAATTTGGCATTATCTAGTAAAGTTGAATCCATGTATACCCACATAGCTATCAATTCTATTCCTACATACGT
 801 GCTTACAAGAATGTCCATAAAACCCTGTTTATAATAGCCAAAAGAACAGGGAACAACCATAATGCACATCAAAAGAAGAA
 881 TGGATTAAAAAAATTATATTCACACACAGGAGTACTATATAGTATTGAAAACAATTGAAGTACAGCTAAATGTAATAACG
 961 TAACACAATACAACTCTCAGAAACATAATGTTAAGCGAACAAAGCAGGTTTTCAGAAAATATATGCAGAATAATTCCATT
1041 TATATAAAGTTCCAGAGCATGCAAAACTAAATCATTTTGTATAAAAAACCCAACAAATGTGATGAGACAATAATGGGAAG
1121 GAAGGGAATGAGAAATATTAAATTCTGGATGGTGGTTATCTTTGAGGGAGGGGAATGATGTGATTGGGGAAATGGACTTT
1201 CAAAGGTAATGGTAACTTCCTTAAGCTGGATGGTAGGTCCACTAGTGTTTGCTGCATAGTTATACCTTTTATCTTAAATA
1281 CATTTTGTATCTATTGTAACAACCACTTTAAAGACAACCGTGCTGTAAGGCAGTAGCTAAAAACAGAAAATAGTCCATCG
1361 GGAAGGGTAAGATGGCTTTCTGCTGAGCACAGGGCTAGAAGTGACAGCCCAGTGGGCCTTCCAACTATATGCCAGGGTGT
1441 TAGATGAGTAGAGAGGAGACCACCCAGGAAGTCTGGACAAGGGGTCTGGCATGAGCTCTGGAGAAGATATATTTGAGGAA
1521 CATGGGGTATGCTAGTTTGTTGTCCTGAATTGCTGTAGAGAAGATAATTTAAATTGCATCTTAGAAGACGACCCTGAGGG
1601 TGAATTTCAACTTAGGGCAATTGTTTTAGTTTGTTTCTTATTGGTTTAAATGGATACTTGAAGCTGGATAATTTATAAGG
1681 AAAAGAGATTTATATGACTTACAGTTCTGCAGGCTGTACAAGAAACATGGCACCAGCATCTGCTTCTTCCCCGGCTGCTT
1761 CCACTCATGGTGGAAGGTGAAGGGGAGCCGGATGTGCAGAGATCATATGGCAAGAGAGGAAGCAAGAGAGCGAGGGAGAA
1841 GGTGCCAGGCTCTTTTTAAATAACCGGCTCTTGAGGGAACTAATAGATTGAGAACTCCTTGCTTCTCCTCCCCAGCACAC
1921 CCCACCCCCAGGGACGGCATTAATGTATTCATGAGGGGTCTTCCCCCATGACCCAAACACCTCCCATCAGGCCCCACCTC
2001 CAACACTGGGATCAAATTTCAACATGAGATTTTGGGGGACAAACATGCAAACTATAGCAGCAACCAGCTACCATTCTAAA
2081 ACTGCCATATGATTTTAGGATTTTTAAAAAGGGCCAAATTTAGGTTAAGCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uaCAGGGUGGGGGUGAGGACa 5'
            |||:||     ||||||| 
Target 5' tgGTCTCA----AACTCCTGa 3'
425 - 441 149.00 -18.20
2
miRNA  3' uaCAGGGUGGGGGUGAGGACa 5'
            | |:|||: | |||:||| 
Target 5' ttGGCTCACTGCAACTTCTGc 3'
281 - 301 147.00 -18.10
3
miRNA  3' uacagGGUGGGGGUGAGGACa 5'
               |::|::|||||| || 
Target 5' cccggCTGCTTCCACTCATGg 3'
1750 - 1770 132.00 -17.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN27733213 2 COSMIC
COSN30119728 2 COSMIC
COSN31545208 2 COSMIC
COSN25280212 3 COSMIC
COSN30468770 66 COSMIC
COSN20096519 217 COSMIC
COSN30105719 318 COSMIC
COSN1838556 412 COSMIC
COSN9372419 445 COSMIC
COSN9372418 604 COSMIC
COSN23822216 685 COSMIC
COSN27520942 688 COSMIC
COSN28198258 704 COSMIC
COSN9372417 715 COSMIC
COSN24819042 728 COSMIC
COSN6682837 805 COSMIC
COSN30249461 1013 COSMIC
COSN22744040 1385 COSMIC
COSN5130741 1450 COSMIC
COSN7127802 1922 COSMIC
COSN21806269 2047 COSMIC
COSN5503242 2409 COSMIC
COSN22030866 2518 COSMIC
COSN25531664 2688 COSMIC
COSN4804152 2857 COSMIC
COSN9372416 3251 COSMIC
COSN19469964 3291 COSMIC
COSN6180515 4126 COSMIC
COSN23309785 4248 COSMIC
COSN15075144 4498 COSMIC
COSN7803286 4917 COSMIC
COSN6180514 5135 COSMIC
COSN9372415 5306 COSMIC
COSN7127801 5904 COSMIC
COSN22093888 5944 COSMIC
COSN7127800 6819 COSMIC
COSN27836287 6957 COSMIC
COSN23249088 7126 COSMIC
COSN23873842 7764 COSMIC
COSN26410828 7840 COSMIC
COSN28990691 8005 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1273089018 1 dbSNP
rs758020587 2 dbSNP
rs1306989429 11 dbSNP
rs745477675 16 dbSNP
rs1347784498 20 dbSNP
rs1301483832 23 dbSNP
rs1437504341 27 dbSNP
rs369010808 32 dbSNP
rs757043372 33 dbSNP
rs753678802 34 dbSNP
rs1451792365 36 dbSNP
rs764180676 39 dbSNP
rs756098916 46 dbSNP
rs995833347 48 dbSNP
rs1480615411 50 dbSNP
rs752759198 51 dbSNP
rs1038904176 55 dbSNP
rs1329910512 60 dbSNP
rs1342213756 67 dbSNP
rs767770189 76 dbSNP
rs1241931101 77 dbSNP
rs1465619292 87 dbSNP
rs1401458808 88 dbSNP
rs943270983 89 dbSNP
rs186609289 100 dbSNP
rs1265920080 101 dbSNP
rs1347929328 105 dbSNP
rs755192926 107 dbSNP
rs1182818173 109 dbSNP
rs1170049215 111 dbSNP
rs1016574625 122 dbSNP
rs1187917120 144 dbSNP
rs1412764552 145 dbSNP
rs1157209404 146 dbSNP
rs1458935182 146 dbSNP
rs1376742240 160 dbSNP
rs1388182512 168 dbSNP
rs1381209959 180 dbSNP
rs1004818496 182 dbSNP
rs1394185348 184 dbSNP
rs1350555676 185 dbSNP
rs1229773215 188 dbSNP
rs1286006557 192 dbSNP
rs1315988622 200 dbSNP
rs1211213205 202 dbSNP
rs1281926807 203 dbSNP
rs1210777621 205 dbSNP
rs1473573848 206 dbSNP
rs1180129076 207 dbSNP
rs1198883111 214 dbSNP
rs1407470698 215 dbSNP
rs1455196241 217 dbSNP
rs745562740 217 dbSNP
rs397718360 218 dbSNP
rs776085688 218 dbSNP
rs1178559835 219 dbSNP
rs1235900969 229 dbSNP
rs201533392 231 dbSNP
rs34203821 231 dbSNP
rs1177921011 232 dbSNP
rs1411075551 234 dbSNP
rs1458196448 234 dbSNP
rs1305670794 235 dbSNP
rs1252365498 236 dbSNP
rs1372032769 241 dbSNP
rs556831739 244 dbSNP
rs1303026458 245 dbSNP
rs1310799267 257 dbSNP
rs886245466 258 dbSNP
rs1255638862 259 dbSNP
rs1484337825 266 dbSNP
rs1203063562 267 dbSNP
rs1235021467 269 dbSNP
rs1488876915 270 dbSNP
rs1024774363 284 dbSNP
rs1423408632 287 dbSNP
rs925314078 299 dbSNP
rs1172802254 309 dbSNP
rs1350135782 326 dbSNP
rs1390667341 328 dbSNP
rs1307241032 330 dbSNP
rs1014256113 339 dbSNP
rs1168297294 341 dbSNP
rs979392918 342 dbSNP
rs1436652492 363 dbSNP
rs895904126 368 dbSNP
rs770784762 372 dbSNP
rs1446661550 373 dbSNP
rs1294850245 374 dbSNP
rs1368348215 383 dbSNP
rs1440570569 386 dbSNP
rs966857451 395 dbSNP
rs1055842410 398 dbSNP
rs544804617 400 dbSNP
rs1322401920 403 dbSNP
rs992344172 404 dbSNP
rs766309019 406 dbSNP
rs1033951774 408 dbSNP
rs1394668664 411 dbSNP
rs1400963524 415 dbSNP
rs1043678250 417 dbSNP
rs1248384934 425 dbSNP
rs879652670 442 dbSNP
rs1002482641 443 dbSNP
rs962944328 451 dbSNP
rs1451163217 453 dbSNP
rs1166080240 456 dbSNP
rs1436265878 457 dbSNP
rs577720765 463 dbSNP
rs1006298826 464 dbSNP
rs1460568024 469 dbSNP
rs1320874054 472 dbSNP
rs913363338 492 dbSNP
rs1429145987 494 dbSNP
rs987635141 499 dbSNP
rs148247112 500 dbSNP
rs773547953 501 dbSNP
rs765719032 503 dbSNP
rs1441632980 504 dbSNP
rs573131592 506 dbSNP
rs1466032156 509 dbSNP
rs1190771364 518 dbSNP
rs1241397300 535 dbSNP
rs1256676606 549 dbSNP
rs997376878 551 dbSNP
rs557211462 552 dbSNP
rs901707637 554 dbSNP
rs974512691 566 dbSNP
rs1473105060 567 dbSNP
rs1183572117 574 dbSNP
rs1414996111 578 dbSNP
rs1211847842 580 dbSNP
rs1038828592 584 dbSNP
rs1474630639 584 dbSNP
rs1390392165 590 dbSNP
rs1399264089 592 dbSNP
rs963348388 596 dbSNP
rs1015942406 605 dbSNP
rs371416529 609 dbSNP
rs554698337 610 dbSNP
rs1043733854 614 dbSNP
rs1229086259 629 dbSNP
rs536645668 631 dbSNP
rs1290380150 636 dbSNP
rs773079115 637 dbSNP
rs181505633 667 dbSNP
rs1281787547 672 dbSNP
rs1243337154 676 dbSNP
rs1283259610 678 dbSNP
rs551256793 683 dbSNP
rs1340237506 684 dbSNP
rs1313925123 685 dbSNP
rs1212139456 686 dbSNP
rs1013366899 687 dbSNP
rs1358264837 688 dbSNP
rs1296987593 689 dbSNP
rs1413654222 689 dbSNP
rs895012461 689 dbSNP
rs1491487360 690 dbSNP
rs1157684477 702 dbSNP
rs1311518869 705 dbSNP
rs1338212641 705 dbSNP
rs1426295515 705 dbSNP
rs5830455 705 dbSNP
rs878992236 705 dbSNP
rs1409983565 706 dbSNP
rs773540320 707 dbSNP
rs532769154 722 dbSNP
rs939400215 723 dbSNP
rs1472458234 727 dbSNP
rs1236227338 730 dbSNP
rs1278029497 748 dbSNP
rs77674058 754 dbSNP
rs904493500 758 dbSNP
rs1253314989 760 dbSNP
rs1435628499 763 dbSNP
rs1180639345 768 dbSNP
rs1043063949 769 dbSNP
rs946077978 773 dbSNP
rs547152096 774 dbSNP
rs892043154 778 dbSNP
rs1052045262 782 dbSNP
rs1447653148 783 dbSNP
rs1286503154 784 dbSNP
rs933455404 787 dbSNP
rs1324376311 790 dbSNP
rs1333064978 791 dbSNP
rs1208557349 792 dbSNP
rs1442771449 794 dbSNP
rs528210452 798 dbSNP
rs775070856 799 dbSNP
rs962996212 802 dbSNP
rs1253072651 809 dbSNP
rs1356307398 811 dbSNP
rs1336799095 813 dbSNP
rs941799946 817 dbSNP
rs771443544 823 dbSNP
rs908833964 825 dbSNP
rs1413978307 833 dbSNP
rs1252740601 834 dbSNP
rs1450548075 835 dbSNP
rs984482542 835 dbSNP
rs1191051793 838 dbSNP
rs983137739 846 dbSNP
rs1294248319 847 dbSNP
rs1393099766 850 dbSNP
rs1460046065 851 dbSNP
rs1325546486 854 dbSNP
rs950422129 857 dbSNP
rs561026881 859 dbSNP
rs189193053 866 dbSNP
rs1226006569 868 dbSNP
rs1265483042 869 dbSNP
rs117657563 871 dbSNP
rs992061105 877 dbSNP
rs1272230103 880 dbSNP
rs1277181236 881 dbSNP
rs1465577083 903 dbSNP
rs959176184 905 dbSNP
rs1033486685 910 dbSNP
rs997702655 922 dbSNP
rs563247880 931 dbSNP
rs1188903467 933 dbSNP
rs544868224 934 dbSNP
rs1420093067 940 dbSNP
rs1474303754 949 dbSNP
rs1164395687 951 dbSNP
rs901592933 953 dbSNP
rs1017428907 954 dbSNP
rs1457529956 956 dbSNP
rs539784989 959 dbSNP
rs547651914 960 dbSNP
rs1381555720 966 dbSNP
rs1404659553 968 dbSNP
rs1313426224 990 dbSNP
rs116768136 996 dbSNP
rs1230928492 997 dbSNP
rs1166758424 1001 dbSNP
rs1292229952 1009 dbSNP
rs1329464976 1020 dbSNP
rs1044005039 1022 dbSNP
rs1259304212 1028 dbSNP
rs4648246 1037 dbSNP
rs555054813 1038 dbSNP
rs1056457538 1041 dbSNP
rs1260231453 1044 dbSNP
rs143170439 1052 dbSNP
rs926691954 1053 dbSNP
rs575675600 1055 dbSNP
rs557711933 1059 dbSNP
rs980938887 1064 dbSNP
rs941476216 1071 dbSNP
rs1196882862 1087 dbSNP
rs1157258834 1088 dbSNP
rs1451487914 1089 dbSNP
rs942234872 1089 dbSNP
rs757157108 1106 dbSNP
rs749150691 1107 dbSNP
rs1377215235 1117 dbSNP
rs1412327690 1120 dbSNP
rs777527493 1123 dbSNP
rs1350618621 1130 dbSNP
rs1225094118 1132 dbSNP
rs1304495541 1135 dbSNP
rs1047965746 1138 dbSNP
rs1215872581 1140 dbSNP
rs1316438380 1149 dbSNP
rs983461899 1155 dbSNP
rs1234433754 1159 dbSNP
rs1257881014 1177 dbSNP
rs1283023803 1183 dbSNP
rs1214770545 1188 dbSNP
rs928957547 1189 dbSNP
rs1210846032 1201 dbSNP
rs1363683718 1203 dbSNP
rs951649622 1211 dbSNP
rs549167287 1214 dbSNP
rs1026432619 1216 dbSNP
rs749291672 1221 dbSNP
rs1371559040 1223 dbSNP
rs917602154 1232 dbSNP
rs992010123 1234 dbSNP
rs1174052147 1246 dbSNP
rs1464053061 1252 dbSNP
rs1396772816 1259 dbSNP
rs975770828 1263 dbSNP
rs1170935096 1267 dbSNP
rs965768539 1270 dbSNP
rs1354600998 1273 dbSNP
rs1443743580 1273 dbSNP
rs1410704550 1281 dbSNP
rs979281238 1283 dbSNP
rs538994169 1289 dbSNP
rs1306043881 1290 dbSNP
rs13384698 1291 dbSNP
rs1234182049 1292 dbSNP
rs546920710 1293 dbSNP
rs1309265165 1307 dbSNP
rs535216083 1309 dbSNP
rs903670148 1315 dbSNP
rs1021693317 1318 dbSNP
rs4648247 1319 dbSNP
rs1009930127 1320 dbSNP
rs1456860243 1327 dbSNP
rs186399038 1336 dbSNP
rs1056908674 1343 dbSNP
rs1030342552 1348 dbSNP
rs780928822 1351 dbSNP
rs997731021 1359 dbSNP
rs182060180 1360 dbSNP
rs1411102531 1362 dbSNP
rs1003507713 1370 dbSNP
rs115792690 1381 dbSNP
rs1461618209 1388 dbSNP
rs1327569942 1393 dbSNP
rs1276077021 1394 dbSNP
rs1369232029 1396 dbSNP
rs1440636890 1397 dbSNP
rs905285736 1402 dbSNP
rs1298916288 1406 dbSNP
rs1364727017 1408 dbSNP
rs751661263 1409 dbSNP
rs900754708 1422 dbSNP
rs1294910505 1425 dbSNP
rs941406546 1432 dbSNP
rs910069649 1435 dbSNP
rs1047218102 1436 dbSNP
rs1271580606 1437 dbSNP
rs1006378339 1443 dbSNP
rs1423403384 1446 dbSNP
rs930259215 1448 dbSNP
rs1242587082 1450 dbSNP
rs565065016 1456 dbSNP
rs1476331568 1461 dbSNP
rs766508139 1462 dbSNP
rs1298483699 1464 dbSNP
rs922837817 1465 dbSNP
rs1444124574 1466 dbSNP
rs1475286052 1471 dbSNP
rs781434776 1472 dbSNP
rs1356428449 1473 dbSNP
rs755273821 1473 dbSNP
rs1174214410 1478 dbSNP
rs758359896 1480 dbSNP
rs1461208780 1483 dbSNP
rs747321014 1483 dbSNP
rs1319426302 1484 dbSNP
rs1347356893 1490 dbSNP
rs1429214968 1491 dbSNP
rs1288860287 1507 dbSNP
rs887967692 1509 dbSNP
rs1395739151 1510 dbSNP
rs377368249 1522 dbSNP
rs1334477244 1523 dbSNP
rs1229282515 1527 dbSNP
rs376215671 1533 dbSNP
rs535411902 1544 dbSNP
rs1047450607 1574 dbSNP
rs1438338405 1575 dbSNP
rs1448577732 1580 dbSNP
rs1213549660 1583 dbSNP
rs780571502 1589 dbSNP
rs917549670 1591 dbSNP
rs1189475631 1596 dbSNP
rs985868377 1602 dbSNP
rs1415158315 1604 dbSNP
rs1056054093 1607 dbSNP
rs1178075201 1611 dbSNP
rs967813156 1620 dbSNP
rs1410609046 1630 dbSNP
rs1453085593 1637 dbSNP
rs926546352 1637 dbSNP
rs149121346 1639 dbSNP
rs1208961791 1641 dbSNP
rs373410623 1643 dbSNP
rs1009402558 1650 dbSNP
rs72860709 1654 dbSNP
rs189451529 1662 dbSNP
rs988858803 1663 dbSNP
rs369047049 1664 dbSNP
rs1003558503 1668 dbSNP
rs184124437 1671 dbSNP
rs1376678082 1692 dbSNP
rs905171118 1693 dbSNP
rs1285160991 1694 dbSNP
rs1045074801 1719 dbSNP
rs956108496 1726 dbSNP
rs1030462004 1733 dbSNP
rs1005673158 1736 dbSNP
rs1376322828 1739 dbSNP
rs1485094033 1741 dbSNP
rs1182081711 1746 dbSNP
rs976075743 1749 dbSNP
rs965103812 1750 dbSNP
rs1158381107 1752 dbSNP
rs1396107032 1753 dbSNP
rs1017839324 1754 dbSNP
rs1172377920 1769 dbSNP
rs137872243 1772 dbSNP
rs887924566 1774 dbSNP
rs1026907264 1775 dbSNP
rs561383160 1779 dbSNP
rs1047677624 1781 dbSNP
rs1334225062 1782 dbSNP
rs1439705042 1783 dbSNP
rs4648248 1788 dbSNP
rs1308220866 1789 dbSNP
rs1371522577 1804 dbSNP
rs535442660 1822 dbSNP
rs1421448469 1823 dbSNP
rs750931739 1825 dbSNP
rs1412037154 1828 dbSNP
rs993168479 1830 dbSNP
rs896231605 1831 dbSNP
rs762404673 1832 dbSNP
rs930123855 1842 dbSNP
rs1274622621 1845 dbSNP
rs1259194780 1847 dbSNP
rs937659134 1849 dbSNP
rs922856372 1850 dbSNP
rs1041255670 1865 dbSNP
rs946631794 1872 dbSNP
rs1260862417 1884 dbSNP
rs913694514 1884 dbSNP
rs1409585641 1886 dbSNP
rs1326901537 1887 dbSNP
rs942934927 1889 dbSNP
rs1442842199 1892 dbSNP
rs1357212716 1894 dbSNP
rs1301092265 1895 dbSNP
rs1330475840 1897 dbSNP
rs933849171 1910 dbSNP
rs910248512 1911 dbSNP
rs1319896643 1914 dbSNP
rs1311694853 1915 dbSNP
rs1233695795 1917 dbSNP
rs1356265085 1922 dbSNP
rs1271403531 1923 dbSNP
rs1336946075 1929 dbSNP
rs1197618167 1930 dbSNP
rs1295345411 1930 dbSNP
rs985753147 1935 dbSNP
rs1470059798 1936 dbSNP
rs923338833 1943 dbSNP
rs765716095 1944 dbSNP
rs1384324519 1946 dbSNP
rs976190575 1948 dbSNP
rs964718692 1951 dbSNP
rs777150654 1957 dbSNP
rs1455772442 1959 dbSNP
rs1348673202 1961 dbSNP
rs1164584230 1962 dbSNP
rs1423338532 1963 dbSNP
rs1165845795 1964 dbSNP
rs1462295333 1964 dbSNP
rs1420314735 1965 dbSNP
rs1420555666 1968 dbSNP
rs560872866 1972 dbSNP
rs1389802439 1975 dbSNP
rs1427607800 1976 dbSNP
rs988388633 1985 dbSNP
rs1187793715 1988 dbSNP
rs1487435741 1990 dbSNP
rs1272479759 1992 dbSNP
rs1214321219 1996 dbSNP
rs1320282766 2001 dbSNP
rs1336658934 2002 dbSNP
rs1255973299 2003 dbSNP
rs760406924 2015 dbSNP
rs1324102927 2020 dbSNP
rs1217001348 2029 dbSNP
rs1326108756 2034 dbSNP
rs774957235 2035 dbSNP
rs1293475990 2038 dbSNP
rs1336533477 2048 dbSNP
rs1231118054 2049 dbSNP
rs1384012001 2052 dbSNP
rs956538123 2054 dbSNP
rs1265202275 2057 dbSNP
rs4648249 2070 dbSNP
rs1442352331 2087 dbSNP
rs1397108024 2088 dbSNP
rs1169037541 2091 dbSNP
rs575789185 2097 dbSNP
rs1461137361 2102 dbSNP
rs1260270603 2106 dbSNP
rs1003489783 2107 dbSNP
rs985025950 2114 dbSNP
rs969285585 2127 dbSNP
rs1023679615 2135 dbSNP
rs1171832201 2145 dbSNP
rs1367670588 2158 dbSNP
rs1454122443 2160 dbSNP
rs17020216 2161 dbSNP
rs1382726459 2163 dbSNP
rs1251899941 2164 dbSNP
rs888535313 2165 dbSNP
rs1469802331 2168 dbSNP
rs1025697525 2171 dbSNP
rs994759711 2172 dbSNP
rs1311654462 2173 dbSNP
rs1317831886 2180 dbSNP
rs568028452 2181 dbSNP
rs1259441793 2192 dbSNP
rs1034708092 2211 dbSNP
rs755622443 2213 dbSNP
rs539016134 2214 dbSNP
rs546696202 2218 dbSNP
rs745414556 2219 dbSNP
rs942991269 2227 dbSNP
rs528272478 2238 dbSNP
rs1419398851 2239 dbSNP
rs145294403 2241 dbSNP
rs1050055473 2245 dbSNP
rs1378295873 2247 dbSNP
rs946369383 2249 dbSNP
rs1174249498 2257 dbSNP
rs892371137 2274 dbSNP
rs1432334500 2278 dbSNP
rs1052382135 2280 dbSNP
rs1373640501 2286 dbSNP
rs1393463884 2296 dbSNP
rs1305273569 2298 dbSNP
rs1376698707 2301 dbSNP
rs1235655955 2305 dbSNP
rs773851255 2308 dbSNP
rs933795344 2314 dbSNP
rs922449591 2320 dbSNP
rs976136775 2321 dbSNP
rs564304993 2322 dbSNP
rs749162695 2324 dbSNP
rs1438928893 2325 dbSNP
rs935057235 2333 dbSNP
rs553582616 2342 dbSNP
rs1396830286 2346 dbSNP
rs1391189263 2350 dbSNP
rs1174787355 2353 dbSNP
rs1430905630 2353 dbSNP
rs1354654889 2354 dbSNP
rs981937617 2364 dbSNP
rs969296778 2378 dbSNP
rs1399935436 2384 dbSNP
rs952107228 2393 dbSNP
rs1310456440 2402 dbSNP
rs1306208438 2408 dbSNP
rs1369466947 2410 dbSNP
rs919491115 2417 dbSNP
rs1397744285 2419 dbSNP
rs1309398233 2436 dbSNP
rs552487984 2459 dbSNP
rs1299514030 2461 dbSNP
rs1257671361 2463 dbSNP
rs1464275012 2469 dbSNP
rs972306349 2470 dbSNP
rs11539584 2483 dbSNP
rs1254775484 2494 dbSNP
rs534912688 2503 dbSNP
rs1393922325 2509 dbSNP
rs960832067 2512 dbSNP
rs1419600769 2518 dbSNP
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rs1426951099 5940 dbSNP
rs1015093205 5944 dbSNP
rs186274092 5945 dbSNP
rs1168485328 5949 dbSNP
rs890720050 5952 dbSNP
rs1051943052 5956 dbSNP
rs756596697 5965 dbSNP
rs941393087 5966 dbSNP
rs1365755178 5978 dbSNP
rs908781104 5979 dbSNP
rs996367937 5979 dbSNP
rs1394377381 5981 dbSNP
rs1272478268 5992 dbSNP
rs141785491 5997 dbSNP
rs1227698369 6001 dbSNP
rs1039769596 6002 dbSNP
rs748617687 6003 dbSNP
rs925656972 6004 dbSNP
rs1041583071 6017 dbSNP
rs1454094359 6019 dbSNP
rs113975651 6023 dbSNP
rs1474396292 6024 dbSNP
rs1167349915 6038 dbSNP
rs991605800 6039 dbSNP
rs1426158388 6040 dbSNP
rs11124559 6054 dbSNP
rs1401610284 6056 dbSNP
rs567410479 6068 dbSNP
rs978413085 6079 dbSNP
rs1271618406 6090 dbSNP
rs1205269584 6094 dbSNP
rs958861446 6103 dbSNP
rs927352940 6104 dbSNP
rs549084855 6107 dbSNP
rs973771567 6111 dbSNP
rs1265129560 6115 dbSNP
rs780673055 6123 dbSNP
rs754537980 6126 dbSNP
rs1301142746 6127 dbSNP
rs190611061 6137 dbSNP
rs866977427 6138 dbSNP
rs558524935 6144 dbSNP
rs766058527 6154 dbSNP
rs1243201713 6158 dbSNP
rs1445981981 6174 dbSNP
rs1368004931 6186 dbSNP
rs186284590 6187 dbSNP
rs1005024827 6193 dbSNP
rs954900052 6196 dbSNP
rs566520708 6197 dbSNP
rs1438818718 6198 dbSNP
rs547959815 6207 dbSNP
rs535589136 6209 dbSNP
rs1454007164 6210 dbSNP
rs996445180 6211 dbSNP
rs1430487513 6215 dbSNP
rs762767385 6217 dbSNP
rs1372546772 6221 dbSNP
rs900748860 6229 dbSNP
rs1450494719 6239 dbSNP
rs1172287123 6241 dbSNP
rs568206852 6241 dbSNP
rs549812809 6242 dbSNP
rs1414436537 6244 dbSNP
rs576219249 6244 dbSNP
rs758039834 6245 dbSNP
rs1281065459 6257 dbSNP
rs1426260829 6265 dbSNP
rs941342098 6281 dbSNP
rs1193307189 6299 dbSNP
rs1198171616 6301 dbSNP
rs531561715 6303 dbSNP
rs1419299309 6304 dbSNP
rs1183613225 6307 dbSNP
rs111521470 6319 dbSNP
rs1047725979 6320 dbSNP
rs112433864 6329 dbSNP
rs1468232246 6335 dbSNP
rs1177645760 6338 dbSNP
rs138161510 6342 dbSNP
rs749959381 6348 dbSNP
rs1468709518 6351 dbSNP
rs1302269210 6353 dbSNP
rs950330854 6369 dbSNP
rs552562330 6382 dbSNP
rs1393347013 6394 dbSNP
rs1327159970 6401 dbSNP
rs764746104 6410 dbSNP
rs917527739 6420 dbSNP
rs1227512652 6426 dbSNP
rs527905720 6427 dbSNP
rs145574647 6430 dbSNP
rs768845872 6431 dbSNP
rs1254891583 6432 dbSNP
rs945764538 6437 dbSNP
rs917119827 6438 dbSNP
rs1210024485 6445 dbSNP
rs1056982638 6446 dbSNP
rs181610576 6456 dbSNP
rs1221867099 6459 dbSNP
rs1349777417 6461 dbSNP
rs1434602034 6473 dbSNP
rs1431939534 6474 dbSNP
rs1176044918 6479 dbSNP
rs927168981 6481 dbSNP
rs967006567 6482 dbSNP
rs141483466 6483 dbSNP
rs987757008 6488 dbSNP
rs369636076 6495 dbSNP
rs907864199 6496 dbSNP
rs1303531435 6500 dbSNP
rs569388357 6509 dbSNP
rs1347232471 6515 dbSNP
rs983529466 6520 dbSNP
rs996004040 6530 dbSNP
rs1308042771 6540 dbSNP
rs1228913735 6545 dbSNP
rs1271871363 6547 dbSNP
rs138538842 6548 dbSNP
rs1222853317 6549 dbSNP
rs1271475726 6567 dbSNP
rs963198970 6573 dbSNP
rs954785340 6574 dbSNP
rs1360263504 6575 dbSNP
rs1430832404 6581 dbSNP
rs1178599903 6598 dbSNP
rs1186678628 6606 dbSNP
rs1030496115 6609 dbSNP
rs17020213 6610 dbSNP
rs1159404577 6620 dbSNP
rs1473387755 6631 dbSNP
rs544197772 6632 dbSNP
rs1032979852 6644 dbSNP
rs1362506369 6650 dbSNP
rs1294756454 6654 dbSNP
rs1383851460 6654 dbSNP
rs1483500305 6656 dbSNP
rs1239132990 6659 dbSNP
rs576722741 6660 dbSNP
rs1246226298 6671 dbSNP
rs1213631444 6672 dbSNP
rs558835758 6680 dbSNP
rs775424182 6682 dbSNP
rs1047054057 6695 dbSNP
rs377701172 6705 dbSNP
rs1487135384 6708 dbSNP
rs904216568 6713 dbSNP
rs771340092 6718 dbSNP
rs1019952019 6719 dbSNP
rs1010027013 6720 dbSNP
rs896057571 6721 dbSNP
rs749468327 6723 dbSNP
rs773173296 6726 dbSNP
rs540185789 6728 dbSNP
rs937469615 6730 dbSNP
rs1056973473 6731 dbSNP
rs35978346 6732 dbSNP
rs1387234895 6738 dbSNP
rs905798033 6739 dbSNP
rs143061841 6743 dbSNP
rs13999 6746 dbSNP
rs14041 6754 dbSNP
rs536038735 6759 dbSNP
rs1388313750 6763 dbSNP
rs987140660 6763 dbSNP
rs1319157318 6770 dbSNP
rs1321673444 6777 dbSNP
rs1207354703 6783 dbSNP
rs1268013717 6784 dbSNP
rs746199614 6795 dbSNP
rs557348115 6796 dbSNP
rs1458437353 6797 dbSNP
rs748620867 6809 dbSNP
rs1205580655 6815 dbSNP
rs781746168 6818 dbSNP
rs1163721842 6819 dbSNP
rs10697 6827 dbSNP
rs1423871350 6837 dbSNP
rs1415398831 6838 dbSNP
rs954547740 6847 dbSNP
rs146761683 6852 dbSNP
rs975076467 6856 dbSNP
rs371539935 6864 dbSNP
rs1470266398 6870 dbSNP
rs1016053418 6872 dbSNP
rs1004711669 6873 dbSNP
rs1298433373 6874 dbSNP
rs1248362014 6883 dbSNP
rs1210373877 6886 dbSNP
rs1226894393 6891 dbSNP
rs190225957 6892 dbSNP
rs1271504796 6897 dbSNP
rs1026179381 6901 dbSNP
rs187470917 6902 dbSNP
rs923326289 6905 dbSNP
rs974954167 6908 dbSNP
rs965221441 6914 dbSNP
rs749601169 6920 dbSNP
rs1174298046 6924 dbSNP
rs1056022446 6937 dbSNP
rs1032494140 6940 dbSNP
rs1413370468 6940 dbSNP
rs1371965073 6958 dbSNP
rs980124757 6966 dbSNP
rs180766333 6970 dbSNP
rs1019961903 6971 dbSNP
rs1439190217 6972 dbSNP
rs1043247198 6976 dbSNP
rs946224445 6978 dbSNP
rs1215187075 6979 dbSNP
rs1437716251 6981 dbSNP
rs1204790063 6990 dbSNP
rs570727012 6998 dbSNP
rs912960223 7014 dbSNP
rs771388729 7022 dbSNP
rs755444411 7031 dbSNP
rs895580888 7032 dbSNP
rs1458135482 7037 dbSNP
rs1035823330 7040 dbSNP
rs574339074 7047 dbSNP
rs12613037 7064 dbSNP
rs1186528799 7066 dbSNP
rs1448736794 7067 dbSNP
rs1427404420 7068 dbSNP
rs1390718481 7070 dbSNP
rs1167624527 7077 dbSNP
rs1037533396 7081 dbSNP
rs974592085 7094 dbSNP
rs1407395514 7102 dbSNP
rs941991725 7104 dbSNP
rs567159440 7113 dbSNP
rs941949134 7126 dbSNP
rs111469570 7136 dbSNP
rs1299914599 7137 dbSNP
rs150519742 7137 dbSNP
rs950577509 7137 dbSNP
rs1209424479 7152 dbSNP
rs189590196 7156 dbSNP
rs771438296 7156 dbSNP
rs780382678 7157 dbSNP
rs933296386 7158 dbSNP
rs993335463 7160 dbSNP
rs923378348 7167 dbSNP
rs1127906 7172 dbSNP
rs149068036 7177 dbSNP
rs1304153695 7180 dbSNP
rs1001576567 7184 dbSNP
rs1231315954 7185 dbSNP
rs925480413 7190 dbSNP
rs1369202182 7192 dbSNP
rs1301059000 7199 dbSNP
rs1390548913 7204 dbSNP
rs1386945420 7209 dbSNP
rs183947489 7216 dbSNP
rs1369305574 7218 dbSNP
rs1387128558 7225 dbSNP
rs1434399876 7227 dbSNP
rs1315835350 7234 dbSNP
rs1295881580 7238 dbSNP
rs979583619 7247 dbSNP
rs750024101 7250 dbSNP
rs966956407 7254 dbSNP
rs754464049 7259 dbSNP
rs952997577 7262 dbSNP
rs1228902652 7263 dbSNP
rs74888798 7265 dbSNP
rs564762368 7268 dbSNP
rs145323770 7269 dbSNP
rs1368223677 7273 dbSNP
rs1199320188 7275 dbSNP
rs988493818 7279 dbSNP
rs959716943 7282 dbSNP
rs779643249 7284 dbSNP
rs868172225 7284 dbSNP
rs909115969 7289 dbSNP
rs1035348446 7295 dbSNP
rs1180361194 7297 dbSNP
rs1001726504 7316 dbSNP
rs753258100 7317 dbSNP
rs969831593 7319 dbSNP
rs1383083858 7321 dbSNP
rs929126836 7322 dbSNP
rs1252674002 7323 dbSNP
rs1207876172 7324 dbSNP
rs1343524904 7325 dbSNP
rs35018631 7325 dbSNP
rs757991879 7335 dbSNP
rs1016514089 7337 dbSNP
rs1336616180 7345 dbSNP
rs1234430581 7356 dbSNP
rs540216290 7357 dbSNP
rs1005975419 7365 dbSNP
rs1314379189 7373 dbSNP
rs886373541 7379 dbSNP
rs1326908034 7389 dbSNP
rs1286058152 7391 dbSNP
rs878938487 7392 dbSNP
rs750174955 7399 dbSNP
rs1346569286 7408 dbSNP
rs1309339921 7420 dbSNP
rs1254986676 7422 dbSNP
rs1047616615 7425 dbSNP
rs764196980 7429 dbSNP
rs572849032 7437 dbSNP
rs960399806 7448 dbSNP
rs997372312 7456 dbSNP
rs1177480698 7463 dbSNP
rs1379419279 7466 dbSNP
rs1467374423 7470 dbSNP
rs1361894326 7472 dbSNP
rs570520032 7477 dbSNP
rs1472407187 7478 dbSNP
rs1039031232 7481 dbSNP
rs369432122 7482 dbSNP
rs925355139 7483 dbSNP
rs1021854588 7492 dbSNP
rs1441126401 7497 dbSNP
rs150468022 7498 dbSNP
rs1332782365 7503 dbSNP
rs1256066518 7524 dbSNP
rs1010498555 7531 dbSNP
rs1201591091 7539 dbSNP
rs1043930447 7544 dbSNP
rs575064956 7545 dbSNP
rs1342424608 7548 dbSNP
rs1206919790 7553 dbSNP
rs1266670609 7559 dbSNP
rs1482954080 7560 dbSNP
rs1192173547 7569 dbSNP
rs1227344816 7570 dbSNP
rs1431963758 7577 dbSNP
rs1198172727 7581 dbSNP
rs891923862 7586 dbSNP
rs1289607917 7606 dbSNP
rs945503359 7608 dbSNP
rs1167002237 7614 dbSNP
rs1241976143 7615 dbSNP
rs1368438013 7616 dbSNP
rs558709934 7619 dbSNP
rs1293909006 7624 dbSNP
rs1392708658 7647 dbSNP
rs1385072667 7649 dbSNP
rs914053276 7649 dbSNP
rs556642198 7653 dbSNP
rs1230115154 7657 dbSNP
rs1294900126 7662 dbSNP
rs1341054651 7667 dbSNP
rs992438570 7668 dbSNP
rs537979834 7673 dbSNP
rs1209830753 7677 dbSNP
rs181352459 7678 dbSNP
rs1451453362 7684 dbSNP
rs544829565 7696 dbSNP
rs1319674117 7705 dbSNP
rs1389719798 7711 dbSNP
rs761733375 7716 dbSNP
rs1456861665 7720 dbSNP
rs960941085 7721 dbSNP
rs558719399 7725 dbSNP
rs534194230 7739 dbSNP
rs1351460170 7741 dbSNP
rs979752347 7743 dbSNP
rs1161738299 7745 dbSNP
rs1047604070 7746 dbSNP
rs929219487 7751 dbSNP
rs1389324040 7762 dbSNP
rs1188818090 7764 dbSNP
rs1426108299 7765 dbSNP
rs1246511906 7768 dbSNP
rs1208496378 7775 dbSNP
rs917882446 7797 dbSNP
rs1228602348 7808 dbSNP
rs1315259435 7821 dbSNP
rs1320346759 7829 dbSNP
rs1244660097 7831 dbSNP
rs1044549 7834 dbSNP
rs1269275002 7838 dbSNP
rs1056694269 7839 dbSNP
rs1465682968 7846 dbSNP
rs1206828616 7857 dbSNP
rs1247561470 7858 dbSNP
rs1183864358 7860 dbSNP
rs767357914 7861 dbSNP
rs1015988417 7865 dbSNP
rs537222130 7874 dbSNP
rs1284306951 7880 dbSNP
rs1344151780 7891 dbSNP
rs373010008 7891 dbSNP
rs571640010 7891 dbSNP
rs950578875 7899 dbSNP
rs1246843037 7900 dbSNP
rs1304269836 7912 dbSNP
rs1376558811 7913 dbSNP
rs1362966342 7926 dbSNP
rs1296516685 7929 dbSNP
rs914577114 7931 dbSNP
rs1227154731 7932 dbSNP
rs1390637363 7933 dbSNP
rs188555707 7935 dbSNP
rs1312886647 7958 dbSNP
rs1212370262 7978 dbSNP
rs1235892389 7980 dbSNP
rs997426313 7993 dbSNP
rs764172693 7995 dbSNP
rs1163921911 8002 dbSNP
rs1252357826 8007 dbSNP
rs12871 8012 dbSNP
rs760494675 8013 dbSNP
rs1007527564 8022 dbSNP
rs1406572826 8024 dbSNP
rs1188547525 8032 dbSNP
rs1357005822 8032 dbSNP
rs1044559 8033 dbSNP
rs1433786795 8034 dbSNP
rs773431516 8034 dbSNP
rs903953878 8045 dbSNP
rs1408503250 8046 dbSNP
rs1279443022 8060 dbSNP
rs1043857443 8061 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions BCBL-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1015448. RNA binding protein: AGO2. Condition:BCBL-1 mRNA ...

- Haecker I; Gay LA; Yang Y; Hu J; Morse AM; et al., 2012, PLoS pathogens.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uacaggguggggguGAGGACa 5'
                        |||||| 
Target 5' ggguucaagugauuCUCCUGc 3'
11 - 31
2
miRNA  3' uacaggguggggguGA-GGAca 5'
                        || |||  
Target 5' -------------uCUGCCUcu 3'
1 - 9
Article - Haecker I; Gay LA; Yang Y; Hu J; Morse AM; et al.
- PLoS pathogens, 2012
KSHV is the etiological agent of Kaposi's sarcoma (KS), primary effusion lymphoma (PEL), and a subset of multicentricCastleman's disease (MCD). The fact that KSHV-encoded miRNAs are readily detectable in all KSHV-associated tumors suggests a potential role in viral pathogenesis and tumorigenesis. MiRNA-mediated regulation of gene expression is a complex network with each miRNA having many potential targets, and to date only few KSHV miRNA targets have been experimentally determined. A detailed understanding of KSHV miRNA functions requires high-through putribonomics to globally analyze putative miRNA targets in a cell type-specific manner. We performed Ago HITS-CLIP to identify viral and cellular miRNAs and their cognate targets in two latently KSHV-infected PEL cell lines. Ago HITS-CLIP recovered 1170 and 950 cellular KSHV miRNA targets from BCBL-1 and BC-3, respectively. Importantly, enriched clusters contained KSHV miRNA seed matches in the 3'UTRs of numerous well characterized targets, among them THBS1, BACH1, and C/EBPbeta. KSHV miRNA targets were strongly enriched for genes involved in multiple pathways central for KSHV biology, such as apoptosis, cell cycle regulation, lymphocyte proliferation, and immune evasion, thus further supporting a role in KSHV pathogenesis and potentially tumorigenesis. A limited number of viral transcripts were also enriched by HITS-CLIP including vIL-6 expressed only in a subset of PEL cells during latency. Interestingly, Ago HITS-CLIP revealed extremely high levels of Ago-associated KSHV miRNAs especially in BC-3 cells where more than 70% of all miRNAs are of viral origin. This suggests that in addition to seed match-specific targeting of cellular genes, KSHV miRNAs may also function by hijacking RISCs, thereby contributing to a global de-repression of cellular gene expression due to the loss of regulation by human miRNAs. In summary, we provide an extensive list of cellular and viral miRNA targets representing an important resource to decipher KSHV miRNA function.
LinkOut: [PMID: 22927820]
CLIP-seq Support 1 for dataset GSM1015448
Method / RBP HITS-CLIP / AGO2
Cell line / Condition BCBL-1 / BCBL-1 mRNA
Location of target site ENST00000233057.4 | 3UTR | UCUGCCUCUUGGGUUCAAGUGAUUCUCCUGCCUCAGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22927820 / GSE41357
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
256 hsa-miR-4433a-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT088097 SEPT2 septin 2 2 2
MIRT143134 MGRN1 mahogunin ring finger 1 2 2
MIRT153912 NCOA3 nuclear receptor coactivator 3 2 2
MIRT154894 GNAS GNAS complex locus 2 4
MIRT200996 ZNF805 zinc finger protein 805 2 2
MIRT215729 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT235593 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT263250 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT317951 CDC5L cell division cycle 5 like 2 4
MIRT325572 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT354739 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 2 2
MIRT444552 UBE2D3 ubiquitin conjugating enzyme E2 D3 2 4
MIRT446978 SUSD5 sushi domain containing 5 2 2
MIRT451036 ZNF610 zinc finger protein 610 2 2
MIRT451596 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT452025 NLRP6 NLR family pyrin domain containing 6 2 2
MIRT452594 CA6 carbonic anhydrase 6 2 2
MIRT452768 TCEA3 transcription elongation factor A3 2 4
MIRT452959 ZNF844 zinc finger protein 844 2 2
MIRT453191 ACSF2 acyl-CoA synthetase family member 2 2 2
MIRT453382 RHD Rh blood group D antigen 2 2
MIRT453685 CEBPD CCAAT/enhancer binding protein delta 2 2
MIRT455272 DDX39B DExD-box helicase 39B 2 8
MIRT455346 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT456494 SERAC1 serine active site containing 1 2 2
MIRT456585 NID1 nidogen 1 2 2
MIRT456888 DDA1 DET1 and DDB1 associated 1 2 2
MIRT457123 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT457852 ZNF324B zinc finger protein 324B 2 2
MIRT457987 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT459278 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 2
MIRT459625 SLC25A33 solute carrier family 25 member 33 2 2
MIRT459715 SGK494 uncharacterized serine/threonine-protein kinase SgK494 2 2
MIRT460057 RPL22L1 ribosomal protein L22 like 1 2 2
MIRT460182 UNK unkempt family zinc finger 2 6
MIRT460288 PDE11A phosphodiesterase 11A 2 2
MIRT460841 EGF epidermal growth factor 2 4
MIRT460860 TBC1D19 TBC1 domain family member 19 2 2
MIRT461519 EMC7 ER membrane protein complex subunit 7 2 2
MIRT461729 SLC27A1 solute carrier family 27 member 1 2 4
MIRT461821 SNAP23 synaptosome associated protein 23 2 2
MIRT462066 CCDC77 coiled-coil domain containing 77 2 4
MIRT462084 MSANTD2 Myb/SANT DNA binding domain containing 2 2 2
MIRT462508 MTFMT mitochondrial methionyl-tRNA formyltransferase 2 10
MIRT464239 VCP valosin containing protein 2 2
MIRT465316 TRAF5 TNF receptor associated factor 5 2 2
MIRT466549 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467128 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 8
MIRT468091 SHCBP1 SHC binding and spindle associated 1 2 2
MIRT469630 RAD21 RAD21 cohesin complex component 2 6
MIRT471097 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472704 MYBL1 MYB proto-oncogene like 1 2 2
MIRT472830 MTMR10 myotubularin related protein 10 2 2
MIRT472872 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT472895 MTDH metadherin 2 2
MIRT473728 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT473859 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT474047 LONRF1 LON peptidase N-terminal domain and ring finger 1 2 2
MIRT474297 LAMC1 laminin subunit gamma 1 2 2
MIRT474658 KLF13 Kruppel like factor 13 2 2
MIRT475234 IKZF3 IKAROS family zinc finger 3 2 2
MIRT475500 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT475742 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT475793 HDGF heparin binding growth factor 2 2
MIRT477254 ERGIC2 ERGIC and golgi 2 2 2
MIRT478228 DDX52 DExD-box helicase 52 2 2
MIRT478393 DCTN5 dynactin subunit 5 2 2
MIRT478754 CS citrate synthase 2 2
MIRT478827 CRKL CRK like proto-oncogene, adaptor protein 2 4
MIRT480234 C9orf41 carnosine N-methyltransferase 1 2 2
MIRT480597 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT484121 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT484689 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT486331 C11orf54 chromosome 11 open reading frame 54 2 4
MIRT488599 FAM3C family with sequence similarity 3 member C 2 8
MIRT488833 MRRF mitochondrial ribosome recycling factor 2 2
MIRT492523 RAB15 RAB15, member RAS oncogene family 2 4
MIRT493632 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT500026 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501075 SMAD7 SMAD family member 7 2 8
MIRT503094 BTG2 BTG anti-proliferation factor 2 2 4
MIRT503336 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT505465 STMN1 stathmin 1 2 4
MIRT505726 SERTAD3 SERTA domain containing 3 2 4
MIRT509333 MS4A4A membrane spanning 4-domains A4A 2 2
MIRT509978 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 4
MIRT513068 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT513446 EMP1 epithelial membrane protein 1 2 6
MIRT513736 PSD3 pleckstrin and Sec7 domain containing 3 2 4
MIRT513996 CENPQ centromere protein Q 2 4
MIRT516538 MIXL1 Mix paired-like homeobox 2 2
MIRT517606 SAV1 salvador family WW domain containing protein 1 2 2
MIRT518064 CEP89 centrosomal protein 89 2 2
MIRT518119 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT518325 WDR92 WD repeat domain 92 2 2
MIRT519048 ABCB11 ATP binding cassette subfamily B member 11 2 2
MIRT520972 SPPL2A signal peptide peptidase like 2A 2 4
MIRT521359 RPL35A ribosomal protein L35a 2 2
MIRT523359 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT523801 FAM63A MINDY lysine 48 deubiquitinase 1 2 2
MIRT524622 C7orf73 short transmembrane mitochondrial protein 1 2 2
MIRT525550 PHB2 prohibitin 2 2 4
MIRT529709 ZBTB49 zinc finger and BTB domain containing 49 2 2
MIRT531605 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT532387 UMPS uridine monophosphate synthetase 2 2
MIRT534468 SCD stearoyl-CoA desaturase 2 4
MIRT537546 ETNK1 ethanolamine kinase 1 2 2
MIRT541619 C11orf31 selenoprotein H 2 2
MIRT548380 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT549523 HDDC2 HD domain containing 2 2 2
MIRT549774 SOD2 superoxide dismutase 2 2 2
MIRT550578 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551498 CENPN centromere protein N 2 4
MIRT552301 ITGA3 integrin subunit alpha 3 2 2
MIRT555400 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT556399 LUC7L LUC7 like 2 2
MIRT557047 HOXB3 homeobox B3 2 2
MIRT558072 ERO1L endoplasmic reticulum oxidoreductase 1 alpha 1 2
MIRT559659 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT561239 ZNF354B zinc finger protein 354B 2 2
MIRT566899 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT568786 FAM120B family with sequence similarity 120B 2 2
MIRT574014 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT574885 Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 2 2
MIRT575243 Serping1 serine (or cysteine) peptidase inhibitor, clade G, member 1 2 2
MIRT576194 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576309 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576484 Lhx4 LIM homeobox protein 4 2 3
MIRT576646 Mill2 MHC I like leukocyte 2 1 1
MIRT576708 Kras Kirsten rat sarcoma viral oncogene homolog 2 2
MIRT576855 Socs6 suppressor of cytokine signaling 6 2 2
MIRT576950 Aldoa aldolase A, fructose-bisphosphate 2 2
MIRT617133 ZNF556 zinc finger protein 556 2 4
MIRT617928 ZNF783 zinc finger family member 783 2 2
MIRT618981 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT621100 SIX3 SIX homeobox 3 2 2
MIRT624537 BROX BRO1 domain and CAAX motif containing 2 2
MIRT625663 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT627059 DCTN6 dynactin subunit 6 2 2
MIRT628319 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT630859 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT632295 TMEM65 transmembrane protein 65 2 2
MIRT634115 ZNF207 zinc finger protein 207 2 2
MIRT634736 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT635655 NDST3 N-deacetylase and N-sulfotransferase 3 2 2
MIRT635772 PDCL3 phosducin like 3 2 2
MIRT635911 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT636365 OGFRL1 opioid growth factor receptor like 1 2 4
MIRT637251 GLRX2 glutaredoxin 2 2 2
MIRT638705 FZD4 frizzled class receptor 4 2 2
MIRT639640 PREX2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 2 2
MIRT639676 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT642267 SMIM17 small integral membrane protein 17 2 2
MIRT642372 ZNF581 zinc finger protein 581 2 2
MIRT643545 SLC25A17 solute carrier family 25 member 17 2 2
MIRT647994 PDE12 phosphodiesterase 12 2 2
MIRT649094 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT650993 ZNF770 zinc finger protein 770 2 2
MIRT651956 UBE2N ubiquitin conjugating enzyme E2 N 2 2
MIRT652977 SUN2 Sad1 and UNC84 domain containing 2 2 2
MIRT654389 RBM12B RNA binding motif protein 12B 2 2
MIRT655637 OLFML2A olfactomedin like 2A 2 2
MIRT655729 NRXN3 neurexin 3 2 2
MIRT658171 FCHSD1 FCH and double SH3 domains 1 2 2
MIRT660937 ACOX1 acyl-CoA oxidase 1 2 2
MIRT662112 CERKL ceramide kinase like 2 2
MIRT662302 MPV17L MPV17 mitochondrial inner membrane protein like 2 2
MIRT662993 TMEM59 transmembrane protein 59 2 2
MIRT663071 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT663704 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663864 MUC20 mucin 20, cell surface associated 2 2
MIRT665185 HAUS5 HAUS augmin like complex subunit 5 2 4
MIRT665402 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT665688 TNPO3 transportin 3 2 2
MIRT665795 TMEM170A transmembrane protein 170A 2 2
MIRT665847 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT666999 PDPN podoplanin 2 2
MIRT667598 LIPC lipase C, hepatic type 2 2
MIRT668576 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT670960 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT671187 ZNF891 zinc finger protein 891 2 2
MIRT671739 ZNF451 zinc finger protein 451 2 2
MIRT672745 ZNF585B zinc finger protein 585B 2 4
MIRT673446 ZNF583 zinc finger protein 583 2 2
MIRT679843 GPR75 G protein-coupled receptor 75 2 2
MIRT680556 ZNF584 zinc finger protein 584