pre-miRNA Information
pre-miRNA hsa-mir-5691   
Genomic Coordinates chr11: 9090312 - 9090379
Description Homo sapiens miR-5691 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-5691
Sequence 9| UUGCUCUGAGCUCCGAGAAAGC |30
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1042238449 3 dbSNP
rs554804494 11 dbSNP
rs1172229307 13 dbSNP
rs112511786 14 dbSNP
Putative Targets

Gene Information
Gene Symbol THAP6   
Synonyms -
Description THAP domain containing 6
Transcript NM_144721   
Expression
Putative miRNA Targets on THAP6
3'UTR of THAP6
(miRNA target sites are highlighted)
>THAP6|NM_144721|3'UTR
   1 AATAATTTCATGTTACGTTCCACCTAAAATTGTCATTGGTACAAATTTTTATAAAATCTCATTTACCATCACTAAATAAT
  81 ATCCATCATTTAAAGTGCTGCTTTGGATTCTCTGGAGCATTATGCATTATAGTTGTTATCCAAAGACTTTTTTGAAAATA
 161 TGCAGAAATTTGTGGTAATTATGTATTTGTGTCTTGTGACAATTATGTTTTATAGACCTACACTAGTGCCAGGTCACTAT
 241 TGTAAGATGTTAAAATCTCAAGAAAATTTCACAGAGCTAAAGAAATGATGTCAAATTAGTCACATTAAGCTATAGTAGAA
 321 GGAATTGGACACTTCTCCAGATATTTGGCTTCAAAGGAGTACCTTTACTTACATGTGCTTTATGGTAAGTACATTGAATT
 401 TTACTTTAAATGCATTTTACTACAAAGCACAATTCATTTGTAATGCATATCCATCTTGGATTCAATCCAAGGTGCTTTAG
 481 CTATCAGTAGTACCAAAGGATCTTTTTACAAGGCTTCCTGTGGTATTGACTCTGAGAATAACACATAGTGAAGATCTGTG
 561 GGCTTTTAAAATTGTTCACAGCCAATTTAAGAAGACCCCTCATGAAGTCTCAGTTTTCAGTACAGTACATCATTCCTCCT
 641 CACTAGGAGCACTTTGATGTAAACCAGAATAGCTTTAAAAAGACAAAAAGGATCGTAGATCTGATTTTTAAATGGTTGGT
 721 TGCTCTGACAGATCTGAACACTTTGCTTCATGACTATTTCGTCATAAAGGTATATGTTTAAAATCTGAATGGCAGTACTA
 801 GCTCTATACTTTTAATACTGCTTTGTATTTTATATGTAAAGTAGTATTGCTGACATTTTAAAAAAATACAAAATACAAAA
 881 GAAACCATTAGAAATTAATAACTGTGGCTCTTCCAGTTGAAATAGGAATTGGAGAGAAAGGATTAGAATATTTTAATTAG
 961 GGGAGTAGATTATTGTCCAAAGGCTTTTATTTAGAGAAACGGGTAATTAAAACAGCAGCTTTAGAATAGCTTCTTACTGA
1041 ATATGCAAAAGAATAATTCCTTGTTATTTCCTAATTGATCCAAGTCTCATAAATTTAGCTTTTGTCATAATTCCTTACCG
1121 AAAACAACTGAAATTGAGAGTCATAAATACTGTGGGTTAGAATAAAAACCATTTGCCAAAGCAACACTCTACTTAGAAGC
1201 ACATGTACATACATGGACCTCATTCAGAAGTCCATGTTGTAGCAGTTAGAATTTGAGTATCAGCCATTTCATTGTAGTAA
1281 CAAAAATTGAATTGCATTTTGTGCTCAGTTGTTTATTGTAATTTTATTTTTGTTACATTAATATTAGTTAAGATATGGTC
1361 ACTTGAATTTTTTGTATTTAAGAATTTTCTGTTTTAATGCATGTTATACTTTTATGTAGGATTCCAAACCTTCCCTCTAA
1441 ATGGGATTTAACCCACATCTGCGAGATCAGCGTTATGCTAAGAGGAAATCACTGAGGCCATATCTTTTTACAATCTGAAA
1521 AAAAAGTAGTAAAAAGGTAGTTAAAAAAAAAAAAGGCCGGGTGGTGGCTCATACCTGTAATCCTAGCACTTTGGGAGGCC
1601 AAGGCAGGCAGATCACTTGAGGTCAGGGGTTCAAAACCAGCCTGGCCAAGATGGTGAAACCCCATCTCTGCTAAAAATAC
1681 AAAAAAAAATTAGCCGGGCATGGTGGCACGTGCCTGTAATCCCAGCTACTTGGGAGACTGAGGCAGGAGAATTGCTTGAA
1761 CCCGGGAGGCGGAGATTGCAGTGAGCCAAGATCACGCCGTTGCACTCCAGCCTGAGCAACAGAGCAAGACTCCATCTCAA
1841 AAAAACAAAACTACTTTCATTAATTACCCATTATTTATTTTAGTTACTTAATTTTGAGTTCATAAATGGCCACCCTAATG
1921 GAAAGTTTGGGTATGATCTTAGGTTTTATGGAGATGTTTTCAATAGAGATTATTTTTCCCTCACCCTATTTGTGAATATA
2001 TAAATTAAAGTAAGACAATGGAGTAAGTAAGAGGGTAGATCCAAACACAGTATGTCTAAATTCTAGCACTCTACTGGCTG
2081 CTTAGAATACACCAAACCTGGAAGACCTTTCCAAGAGTAAAATCCCAGTCTGCCACTATCAAAATTGCCACAGTCACTTT
2161 TACTACTTGTGTTCATAGTAGACTCAGCACTTCTTTTTCACTGGACCTAGTATAACTGAGAAATAAATAACTGTGTGCAA
2241 AATATTGGTATCATTAAGGACCCAGAGCTGCCCATTTTCTCTTTGTTCTAATAGGGAAGCAATTACTGATAGAAATGTGA
2321 GATTAAAAATAGGGTCCTCCCTGCTGCTCCAAACAAATGCCTAAACACAGTATGTATCTCAGTCCTCTGTTCCCAGAGAT
2401 TCCACCCTAGCCCAGGAAAGAACTGGCCTGTGTAAAGCAAAACCCAAGTCATCCCCCTCCAGAAATTTCTCTGGCAGCCA
2481 AGCCTGACCCTAAGGGTTCCACTTTGCTTTAAAAGCTAGGAGTGGCCTCTAGAGCCAGGAACACATTAATACAACAGTTC
2561 AACCTCAGCACCAAGTCAGGTACGAAGCGCTTGATACGTGGAATTTTTCTCTATATCAAGTTTAAATTTCTGGAAATAGA
2641 CTTTGGTTGCTAATGACAATTACAGTTATACCATAGTCTGTAATTTGAGAAAAGGTGAAATGTATTTAATATATATTTAG
2721 TTTTAATAAAAAGATAAAATTATTACAGAAATAATTGAGAGAGAGAAAATCTATTATAATTTATTTGAAAAATAAAACAT
2801 TTTATCCAGTAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cgaaagaGCCUCG-AGUCUCGUu 5'
                 | ||||  ||||||| 
Target 5' ctccagcCTGAGCAACAGAGCAa 3'
1805 - 1827 151.00 -14.80
2
miRNA  3' cgaaagagCCUCGAGUCUCGuu 5'
                  ||| | ||||||  
Target 5' atcattaaGGA-CCCAGAGCtg 3'
2250 - 2270 129.00 -11.50
3
miRNA  3' cgaaagagccucGAGUCUCGuu 5'
                      | ||||||  
Target 5' tcaagaaaatttCACAGAGCta 3'
258 - 279 122.00 -8.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN14123857 10 COSMIC
COSN26998488 18 COSMIC
COSN31598761 19 COSMIC
COSN31526682 20 COSMIC
COSN31590385 33 COSMIC
COSN31591264 59 COSMIC
COSN30472419 85 COSMIC
COSN30150047 88 COSMIC
COSN31497002 114 COSMIC
COSN22117124 761 COSMIC
COSN2044761 811 COSMIC
COSN21598606 986 COSMIC
COSN21662726 1024 COSMIC
COSN9241561 1230 COSMIC
COSN23840030 1356 COSMIC
COSN25804385 1516 COSMIC
COSN27228674 1555 COSMIC
COSN32062055 1555 COSMIC
COSN14842537 1745 COSMIC
COSN23990167 1784 COSMIC
COSN21028955 2251 COSMIC
COSN9241562 2497 COSMIC
COSN23375602 2642 COSMIC
COSN27793859 2688 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs775305862 2 dbSNP
rs762000773 4 dbSNP
rs1348068681 12 dbSNP
rs1287723593 13 dbSNP
rs200886095 18 dbSNP
rs760612371 27 dbSNP
rs766501836 29 dbSNP
rs899946108 30 dbSNP
rs201144684 35 dbSNP
rs760157982 36 dbSNP
rs1464265670 42 dbSNP
rs766411515 45 dbSNP
rs765671993 50 dbSNP
rs1165908718 53 dbSNP
rs1463145546 59 dbSNP
rs1409815363 73 dbSNP
rs111616901 80 dbSNP
rs1050227887 81 dbSNP
rs954568637 87 dbSNP
rs1470813401 94 dbSNP
rs890249828 102 dbSNP
rs1197203210 107 dbSNP
rs150162097 122 dbSNP
rs1468270137 127 dbSNP
rs556038935 130 dbSNP
rs185982918 135 dbSNP
rs1326507238 138 dbSNP
rs774476586 138 dbSNP
rs1282912402 140 dbSNP
rs1223805462 141 dbSNP
rs1017287447 144 dbSNP
rs1375451660 161 dbSNP
rs1272945116 162 dbSNP
rs1439971520 164 dbSNP
rs1482564224 171 dbSNP
rs1371455290 182 dbSNP
rs759475831 182 dbSNP
rs957799569 190 dbSNP
rs17000606 196 dbSNP
rs1014878935 207 dbSNP
rs1158519027 208 dbSNP
rs1472303327 208 dbSNP
rs1410814967 210 dbSNP
rs1157268291 213 dbSNP
rs897725616 214 dbSNP
rs1431693648 216 dbSNP
rs17000608 218 dbSNP
rs1027292720 219 dbSNP
rs1195162560 223 dbSNP
rs1463285224 227 dbSNP
rs1358296222 234 dbSNP
rs969132786 250 dbSNP
rs879332466 258 dbSNP
rs1215901394 266 dbSNP
rs1318186015 275 dbSNP
rs577925410 276 dbSNP
rs753731178 288 dbSNP
rs977698899 293 dbSNP
rs1309766787 294 dbSNP
rs1348388736 295 dbSNP
rs72866280 300 dbSNP
rs938819263 313 dbSNP
rs1285852813 317 dbSNP
rs1360137777 318 dbSNP
rs1055997347 320 dbSNP
rs894540757 326 dbSNP
rs1288447969 339 dbSNP
rs942107062 341 dbSNP
rs1038073308 344 dbSNP
rs988701808 350 dbSNP
rs1332816187 362 dbSNP
rs1434617974 363 dbSNP
rs897829954 372 dbSNP
rs1396159015 373 dbSNP
rs914182666 374 dbSNP
rs1447984326 377 dbSNP
rs192023273 379 dbSNP
rs1278379361 386 dbSNP
rs1310796223 391 dbSNP
rs1208005819 394 dbSNP
rs17000609 395 dbSNP
rs1235225940 410 dbSNP
rs1030242123 413 dbSNP
rs1485978343 422 dbSNP
rs890399854 423 dbSNP
rs957813546 425 dbSNP
rs1306689656 433 dbSNP
rs1248490564 443 dbSNP
rs1295203936 445 dbSNP
rs1215348482 452 dbSNP
rs1364231619 458 dbSNP
rs932743581 467 dbSNP
rs1051163287 473 dbSNP
rs542396038 475 dbSNP
rs149472230 478 dbSNP
rs1424281685 486 dbSNP
rs957748520 491 dbSNP
rs545441178 496 dbSNP
rs377726376 497 dbSNP
rs966393591 506 dbSNP
rs1411133066 507 dbSNP
rs546344183 510 dbSNP
rs1475214740 533 dbSNP
rs1259597353 538 dbSNP
rs1428982305 542 dbSNP
rs1202927932 549 dbSNP
rs564457891 559 dbSNP
rs982213601 560 dbSNP
rs1036579350 561 dbSNP
rs1436829621 562 dbSNP
rs897752916 574 dbSNP
rs995127030 580 dbSNP
rs1309516009 581 dbSNP
rs928884577 585 dbSNP
rs533458037 589 dbSNP
rs991627933 601 dbSNP
rs531963591 612 dbSNP
rs1356174230 620 dbSNP
rs1295698243 629 dbSNP
rs942056093 629 dbSNP
rs1001861123 632 dbSNP
rs1034796549 636 dbSNP
rs550640374 637 dbSNP
rs12647888 644 dbSNP
rs1342118598 646 dbSNP
rs1203549233 667 dbSNP
rs1463793870 671 dbSNP
rs988345754 682 dbSNP
rs1037790059 684 dbSNP
rs1461567043 691 dbSNP
rs1179632343 693 dbSNP
rs1418453706 695 dbSNP
rs1292136724 696 dbSNP
rs564146701 702 dbSNP
rs1178730138 704 dbSNP
rs576051324 707 dbSNP
rs1271580355 715 dbSNP
rs1213267686 719 dbSNP
rs1335605255 724 dbSNP
rs2126854 726 dbSNP
rs890351588 728 dbSNP
rs1316851937 737 dbSNP
rs1308269190 738 dbSNP
rs1393554961 742 dbSNP
rs1369230017 745 dbSNP
rs1007435792 752 dbSNP
rs1245176092 757 dbSNP
rs567732905 757 dbSNP
rs181753896 761 dbSNP
rs893633949 762 dbSNP
rs1156335294 766 dbSNP
rs1450449730 768 dbSNP
rs1364322182 786 dbSNP
rs1161197201 799 dbSNP
rs1010734858 801 dbSNP
rs1252124411 802 dbSNP
rs1020685194 804 dbSNP
rs779635267 806 dbSNP
rs1469101141 807 dbSNP
rs866153764 808 dbSNP
rs966891202 811 dbSNP
rs1255050850 813 dbSNP
rs751238948 837 dbSNP
rs148761977 849 dbSNP
rs1485578831 860 dbSNP
rs200045203 860 dbSNP
rs960239119 861 dbSNP
rs1322534515 863 dbSNP
rs1303154292 864 dbSNP
rs1235429120 867 dbSNP
rs535811010 870 dbSNP
rs1315716027 882 dbSNP
rs578052213 888 dbSNP
rs940068984 891 dbSNP
rs1432810355 894 dbSNP
rs1321651459 899 dbSNP
rs1364851869 900 dbSNP
rs1455377272 903 dbSNP
rs543473451 903 dbSNP
rs1286434862 910 dbSNP
rs374289016 911 dbSNP
rs1262485638 914 dbSNP
rs1218815882 916 dbSNP
rs1484994762 917 dbSNP
rs538645950 924 dbSNP
rs1212057239 952 dbSNP
rs1227828123 958 dbSNP
rs974001864 962 dbSNP
rs919334001 964 dbSNP
rs930490155 984 dbSNP
rs929402247 986 dbSNP
rs1248473672 994 dbSNP
rs540944702 995 dbSNP
rs1297141289 1001 dbSNP
rs556978558 1002 dbSNP
rs1374790719 1020 dbSNP
rs1190987439 1022 dbSNP
rs1239109224 1032 dbSNP
rs780882147 1037 dbSNP
rs113398135 1061 dbSNP
rs1162166660 1083 dbSNP
rs1166420519 1089 dbSNP
rs911902406 1105 dbSNP
rs114433521 1108 dbSNP
rs1001893656 1111 dbSNP
rs1458504195 1120 dbSNP
rs560863921 1121 dbSNP
rs893748580 1125 dbSNP
rs1388414133 1134 dbSNP
rs1009698221 1138 dbSNP
rs1010727318 1143 dbSNP
rs1339668591 1144 dbSNP
rs1021126977 1150 dbSNP
rs770463155 1153 dbSNP
rs1042626974 1157 dbSNP
rs1293871157 1169 dbSNP
rs1416518208 1170 dbSNP
rs902236887 1182 dbSNP
rs1003706784 1185 dbSNP
rs1034650191 1186 dbSNP
rs142475918 1188 dbSNP
rs1397500166 1189 dbSNP
rs540422042 1196 dbSNP
rs1282512383 1197 dbSNP
rs1460002396 1201 dbSNP
rs778276075 1209 dbSNP
rs1165686788 1210 dbSNP
rs1023202393 1213 dbSNP
rs1229314862 1232 dbSNP
rs749672335 1235 dbSNP
rs771339665 1236 dbSNP
rs1438744718 1240 dbSNP
rs973564619 1243 dbSNP
rs1239696648 1244 dbSNP
rs1203187907 1260 dbSNP
rs912517804 1263 dbSNP
rs1273288141 1267 dbSNP
rs1229492930 1274 dbSNP
rs961485098 1275 dbSNP
rs1278822942 1278 dbSNP
rs1442729208 1281 dbSNP
rs564824140 1285 dbSNP
rs1186683163 1295 dbSNP
rs973266890 1296 dbSNP
rs1393968853 1297 dbSNP
rs1165756463 1302 dbSNP
rs1026903974 1312 dbSNP
rs1406502916 1319 dbSNP
rs1158498330 1332 dbSNP
rs1470742430 1333 dbSNP
rs1182509652 1337 dbSNP
rs532901193 1344 dbSNP
rs190493868 1349 dbSNP
rs1048907819 1354 dbSNP
rs1253164810 1359 dbSNP
rs1174684108 1362 dbSNP
rs115010129 1363 dbSNP
rs937882095 1381 dbSNP
rs1224242683 1388 dbSNP
rs912017052 1392 dbSNP
rs1311586624 1400 dbSNP
rs1352451265 1401 dbSNP
rs1056141220 1402 dbSNP
rs759830906 1413 dbSNP
rs1370550433 1414 dbSNP
rs1294329074 1416 dbSNP
rs1438786291 1423 dbSNP
rs1343481353 1426 dbSNP
rs9307834 1427 dbSNP
rs915130695 1428 dbSNP
rs946643404 1429 dbSNP
rs1042184311 1431 dbSNP
rs1362956931 1437 dbSNP
rs1009233767 1438 dbSNP
rs529738790 1446 dbSNP
rs902351824 1463 dbSNP
rs1235611130 1464 dbSNP
rs1257560120 1468 dbSNP
rs939232794 1471 dbSNP
rs1056222130 1472 dbSNP
rs1345441196 1472 dbSNP
rs903590738 1473 dbSNP
rs1199871600 1476 dbSNP
rs775594130 1477 dbSNP
rs1278069410 1478 dbSNP
rs1489233196 1479 dbSNP
rs1483966024 1480 dbSNP
rs894918412 1481 dbSNP
rs182681635 1482 dbSNP
rs1016621122 1483 dbSNP
rs187889749 1488 dbSNP
rs1200531834 1492 dbSNP
rs1302298023 1499 dbSNP
rs1221137909 1500 dbSNP
rs1360066895 1501 dbSNP
rs747567533 1503 dbSNP
rs1378642797 1505 dbSNP
rs768186630 1506 dbSNP
rs1477887856 1507 dbSNP
rs1019860664 1511 dbSNP
rs775967188 1512 dbSNP
rs995507731 1513 dbSNP
rs1372970368 1516 dbSNP
rs1430910798 1517 dbSNP
rs1177851304 1518 dbSNP
rs972744574 1518 dbSNP
rs1418265994 1531 dbSNP
rs1394357843 1532 dbSNP
rs1388805394 1537 dbSNP
rs1255403329 1538 dbSNP
rs10643016 1543 dbSNP
rs1187103399 1543 dbSNP
rs1342445004 1543 dbSNP
rs35046039 1543 dbSNP
rs1292020918 1559 dbSNP
rs1026603819 1560 dbSNP
rs950948592 1561 dbSNP
rs987624830 1562 dbSNP
rs981730779 1563 dbSNP
rs1025868394 1566 dbSNP
rs1440400403 1575 dbSNP
rs1228977673 1576 dbSNP
rs1353622247 1579 dbSNP
rs1170946787 1581 dbSNP
rs1273359018 1583 dbSNP
rs747703617 1584 dbSNP
rs760995559 1585 dbSNP
rs1466771068 1590 dbSNP
rs1414998191 1596 dbSNP
rs1163523209 1598 dbSNP
rs528631060 1602 dbSNP
rs1475510288 1604 dbSNP
rs1018974697 1608 dbSNP
rs1258095477 1613 dbSNP
rs1175277765 1617 dbSNP
rs547219313 1620 dbSNP
rs1480177742 1623 dbSNP
rs1479368852 1625 dbSNP
rs1211307033 1632 dbSNP
rs191306828 1640 dbSNP
rs1199471647 1643 dbSNP
rs974692060 1645 dbSNP
rs1450637179 1647 dbSNP
rs1232681643 1654 dbSNP
rs984635678 1666 dbSNP
rs926411438 1670 dbSNP
rs1390094407 1672 dbSNP
rs1056824680 1681 dbSNP
rs937914775 1681 dbSNP
rs1448565027 1686 dbSNP
rs917834909 1687 dbSNP
rs538774767 1690 dbSNP
rs1450658122 1692 dbSNP
rs1156829738 1696 dbSNP
rs557054822 1697 dbSNP
rs568876926 1708 dbSNP
rs978406044 1711 dbSNP
rs1459484161 1717 dbSNP
rs923918527 1743 dbSNP
rs1251310664 1748 dbSNP
rs750222382 1751 dbSNP
rs1488846762 1763 dbSNP
rs1056339690 1764 dbSNP
rs182632856 1765 dbSNP
rs947801487 1769 dbSNP
rs1310493871 1772 dbSNP
rs866596902 1779 dbSNP
rs1038011226 1786 dbSNP
rs1302217446 1790 dbSNP
rs554518567 1796 dbSNP
rs773062167 1797 dbSNP
rs1048428784 1799 dbSNP
rs367784116 1800 dbSNP
rs1008991641 1808 dbSNP
rs1393577866 1810 dbSNP
rs1019089705 1820 dbSNP
rs1294730432 1822 dbSNP
rs936388366 1823 dbSNP
rs964725623 1835 dbSNP
rs1363537097 1838 dbSNP
rs1485832350 1841 dbSNP
rs1287291627 1859 dbSNP
rs1219320001 1866 dbSNP
rs1346159360 1870 dbSNP
rs1279209466 1871 dbSNP
rs187710623 1877 dbSNP
rs1265475191 1882 dbSNP
rs192520230 1888 dbSNP
rs1381095952 1912 dbSNP
rs754700779 1926 dbSNP
rs1299958627 1931 dbSNP
rs1020313542 1932 dbSNP
rs1374603537 1935 dbSNP
rs1172899799 1937 dbSNP
rs1250358481 1964 dbSNP
rs978140180 1966 dbSNP
rs897385482 1970 dbSNP
rs1477526984 1981 dbSNP
rs1188535352 1985 dbSNP
rs1260284957 2006 dbSNP
rs1196428481 2008 dbSNP
rs923840121 2018 dbSNP
rs960667852 2019 dbSNP
rs994593212 2020 dbSNP
rs1346689847 2021 dbSNP
rs1026957799 2024 dbSNP
rs991966518 2034 dbSNP
rs916427284 2035 dbSNP
rs1317961400 2036 dbSNP
rs1280075213 2040 dbSNP
rs780829027 2042 dbSNP
rs1275998281 2048 dbSNP
rs1412883866 2054 dbSNP
rs752321076 2055 dbSNP
rs1334573997 2057 dbSNP
rs1397505788 2064 dbSNP
rs1347786976 2073 dbSNP
rs1038125705 2074 dbSNP
rs919711584 2076 dbSNP
rs770898496 2088 dbSNP
rs1465201582 2090 dbSNP
rs929619802 2091 dbSNP
rs558749299 2118 dbSNP
rs1046741273 2119 dbSNP
rs576992992 2126 dbSNP
rs1435515529 2127 dbSNP
rs886667415 2131 dbSNP
rs1009106250 2135 dbSNP
rs1034432912 2140 dbSNP
rs959227883 2143 dbSNP
rs991994292 2149 dbSNP
rs917852207 2150 dbSNP
rs79442474 2166 dbSNP
rs900670858 2167 dbSNP
rs1197599774 2170 dbSNP
rs1457896623 2171 dbSNP
rs996339833 2173 dbSNP
rs147530782 2184 dbSNP
rs1334091944 2186 dbSNP
rs968188352 2190 dbSNP
rs1284689476 2198 dbSNP
rs543568351 2210 dbSNP
rs541850016 2216 dbSNP
rs1327158457 2217 dbSNP
rs1446346987 2224 dbSNP
rs924908814 2228 dbSNP
rs1401250694 2231 dbSNP
rs1459887159 2232 dbSNP
rs561421719 2232 dbSNP
rs960572481 2234 dbSNP
rs1269600316 2238 dbSNP
rs756675310 2246 dbSNP
rs1362447954 2257 dbSNP
rs1330311066 2263 dbSNP
rs944226433 2265 dbSNP
rs796391903 2267 dbSNP
rs1239552515 2270 dbSNP
rs1211337292 2272 dbSNP
rs12791 2273 dbSNP
rs1215555208 2286 dbSNP
rs1259258715 2295 dbSNP
rs372246866 2303 dbSNP
rs528822303 2310 dbSNP
rs1348396919 2319 dbSNP
rs1308302921 2320 dbSNP
rs1240520712 2335 dbSNP
rs774399508 2340 dbSNP
rs1377945868 2341 dbSNP
rs969193588 2346 dbSNP
rs546865359 2347 dbSNP
rs1349348922 2349 dbSNP
rs1324228320 2350 dbSNP
rs1026991128 2351 dbSNP
rs888488797 2356 dbSNP
rs1001529071 2360 dbSNP
rs1184670943 2361 dbSNP
rs1034464086 2367 dbSNP
rs919642308 2373 dbSNP
rs960095200 2374 dbSNP
rs1191330502 2379 dbSNP
rs929760230 2381 dbSNP
rs6816985 2388 dbSNP
rs912237654 2399 dbSNP
rs967030061 2402 dbSNP
rs978071655 2407 dbSNP
rs184892003 2408 dbSNP
rs1288484071 2415 dbSNP
rs550620222 2420 dbSNP
rs1367121152 2426 dbSNP
rs9041 2427 dbSNP
rs1438628285 2454 dbSNP
rs900785516 2456 dbSNP
rs1298115597 2458 dbSNP
rs1420742394 2462 dbSNP
rs1362826057 2466 dbSNP
rs1172112492 2469 dbSNP
rs1412365161 2479 dbSNP
rs1413588208 2496 dbSNP
rs932137143 2508 dbSNP
rs1425356309 2515 dbSNP
rs1043912009 2517 dbSNP
rs1474133837 2519 dbSNP
rs767511651 2524 dbSNP
rs1262471100 2535 dbSNP
rs985071820 2536 dbSNP
rs910988587 2543 dbSNP
rs536241532 2548 dbSNP
rs943773930 2549 dbSNP
rs1255175780 2555 dbSNP
rs903909810 2561 dbSNP
rs554988652 2563 dbSNP
rs1031539930 2567 dbSNP
rs1279579890 2574 dbSNP
rs1222790888 2583 dbSNP
rs187645126 2584 dbSNP
rs1013617638 2585 dbSNP
rs1211485582 2589 dbSNP
rs1023545527 2590 dbSNP
rs1048711922 2592 dbSNP
rs969308299 2593 dbSNP
rs1301466208 2597 dbSNP
rs974291187 2598 dbSNP
rs1026821697 2599 dbSNP
rs1280217981 2599 dbSNP
rs951170975 2614 dbSNP
rs1177786298 2620 dbSNP
rs1407761621 2642 dbSNP
rs1484948854 2642 dbSNP
rs1422317498 2645 dbSNP
rs1170725460 2649 dbSNP
rs1478763789 2660 dbSNP
rs982544363 2661 dbSNP
rs1181122153 2671 dbSNP
rs1207422491 2672 dbSNP
rs888689191 2681 dbSNP
rs1212489130 2684 dbSNP
rs912350398 2695 dbSNP
rs1456575320 2701 dbSNP
rs943688035 2702 dbSNP
rs1257542343 2706 dbSNP
rs534124580 2721 dbSNP
rs1001561571 2723 dbSNP
rs541396064 2727 dbSNP
rs1311194464 2728 dbSNP
rs1228178502 2730 dbSNP
rs1175689368 2747 dbSNP
rs1055782442 2757 dbSNP
rs1304907537 2757 dbSNP
rs895903624 2757 dbSNP
rs1331454990 2762 dbSNP
rs1405607055 2764 dbSNP
rs1466717631 2766 dbSNP
rs76080489 2766 dbSNP
rs1163946528 2767 dbSNP
rs558601214 2774 dbSNP
rs1424224501 2775 dbSNP
rs922157208 2776 dbSNP
rs568382891 2779 dbSNP
rs1176771986 2800 dbSNP
rs1463417626 2810 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293
Disease 152815.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "HITS-CLIP data was present in GSM714643. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cgaaagaGCCUCG-AGUCUCGuu 5'
                 | ||||  ||||||  
Target 5' cuccagcCUGAGCAACAGAGC-- 3'
3 - 23
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714643
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000311638.3 | 3UTR | CACUCCAGCCUGAGCAACAGAGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
91 hsa-miR-5691 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT091162 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT242227 TTC9 tetratricopeptide repeat domain 9 2 4
MIRT246192 TXNIP thioredoxin interacting protein 2 2
MIRT251553 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT387267 SOX9 SRY-box 9 2 2
MIRT463486 ZC3H11A zinc finger CCCH-type containing 11A 2 12
MIRT494446 BTG2 BTG anti-proliferation factor 2 2 2
MIRT496478 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT501825 NCOA3 nuclear receptor coactivator 3 2 2
MIRT503072 C6orf120 chromosome 6 open reading frame 120 2 2
MIRT504755 TEP1 telomerase associated protein 1 2 4
MIRT505971 RAB11FIP1 RAB11 family interacting protein 1 2 4
MIRT511868 GOLGA7 golgin A7 2 6
MIRT512900 UBL4A ubiquitin like 4A 2 2
MIRT513048 LYPD6 LY6/PLAUR domain containing 6 2 6
MIRT523772 FAM83D family with sequence similarity 83 member D 2 2
MIRT525126 RPS11 ribosomal protein S11 2 2
MIRT525816 VIMP selenoprotein S 2 10
MIRT531222 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT531729 SLC2A9 solute carrier family 2 member 9 2 2
MIRT536282 LIMA1 LIM domain and actin binding 1 2 2
MIRT537291 G3BP1 G3BP stress granule assembly factor 1 2 2
MIRT537724 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT547940 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 2
MIRT554177 SLC35E2B solute carrier family 35 member E2B 2 2
MIRT555015 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT576717 Wars tryptophanyl-tRNA synthetase 2 2
MIRT607484 HEBP2 heme binding protein 2 2 2
MIRT610786 KLK2 kallikrein related peptidase 2 2 2
MIRT611491 ZNF440 zinc finger protein 440 2 2
MIRT613986 DBT dihydrolipoamide branched chain transacylase E2 2 2
MIRT615782 KIAA0319L KIAA0319 like 2 2
MIRT620563 WBSCR27 methyltransferase like 27 2 4
MIRT624157 DGKE diacylglycerol kinase epsilon 2 2
MIRT626088 MKLN1 muskelin 1 2 2
MIRT629481 GSN gelsolin 2 2
MIRT636645 CDK4 cyclin dependent kinase 4 2 2
MIRT638074 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT638442 PLXDC2 plexin domain containing 2 2 2
MIRT641025 KLHL7 kelch like family member 7 2 2
MIRT641539 MOCOS molybdenum cofactor sulfurase 2 2
MIRT643004 ZNF829 zinc finger protein 829 2 2
MIRT643092 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT644979 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT645912 PLXNA3 plexin A3 2 2
MIRT646605 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT648033 FADS6 fatty acid desaturase 6 2 2
MIRT657491 HBEGF heparin binding EGF like growth factor 2 2
MIRT658381 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT659695 CD200 CD200 molecule 2 2
MIRT661276 TEX9 testis expressed 9 2 2
MIRT661348 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT662948 JPH2 junctophilin 2 2 2
MIRT663225 PPY pancreatic polypeptide 2 2
MIRT663280 SPN sialophorin 2 2
MIRT663335 ZNF74 zinc finger protein 74 2 2
MIRT664344 C16orf45 chromosome 16 open reading frame 45 2 2
MIRT664855 TBRG4 transforming growth factor beta regulator 4 2 2
MIRT665484 VPS53 VPS53, GARP complex subunit 2 2
MIRT666428 SH2B3 SH2B adaptor protein 3 2 2
MIRT668162 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT670170 CCDC142 coiled-coil domain containing 142 2 2
MIRT671277 MTO1 mitochondrial tRNA translation optimization 1 2 2
MIRT672284 GP2 glycoprotein 2 2 2
MIRT672435 RAB10 RAB10, member RAS oncogene family 2 2
MIRT672646 SLC25A16 solute carrier family 25 member 16 2 4
MIRT672760 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672834 AKR7L aldo-keto reductase family 7 like (gene/pseudogene) 2 2
MIRT672841 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT673080 AK1 adenylate kinase 1 2 2
MIRT673148 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673323 THAP1 THAP domain containing 1 2 2
MIRT673893 DCTN6 dynactin subunit 6 2 2
MIRT674182 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT674607 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT674740 SLC16A1 solute carrier family 16 member 1 2 2
MIRT675140 MOGAT1 monoacylglycerol O-acyltransferase 1 2 4
MIRT675194 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT675886 SNAP29 synaptosome associated protein 29 2 2
MIRT679163 PSMB2 proteasome subunit beta 2 2 2
MIRT680337 ZNF281 zinc finger protein 281 2 2
MIRT706699 GPR155 G protein-coupled receptor 155 2 2
MIRT706911 THAP6 THAP domain containing 6 2 2
MIRT707880 SLC45A4 solute carrier family 45 member 4 2 2
MIRT709097 SEPT4 septin 4 2 2
MIRT709408 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT710845 FAM210A family with sequence similarity 210 member A 2 2
MIRT711358 VPS8 VPS8, CORVET complex subunit 2 2
MIRT718590 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT723649 RPTN repetin 2 2
MIRT724208 NUP205 nucleoporin 205 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-5691 Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)

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