miRTarBase - #MIRT707397


—
pre-miRNA Information
pre-miRNA hsa-mir-2115   
Genomic Coordinates chr3: 48316360 - 48316459
Description Homo sapiens miR-2115 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-2115-3p
Sequence 58| CAUCAGAAUUCAUGGAGGCUAG |79
Evidence Experimental
Experiments 454
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN31490809 22 COSMIC
COSN31579735 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs543123304 18 dbSNP
rs1450988157 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol DCAF4L1   
Synonyms WDR21B
Description DDB1 and CUL4 associated factor 4 like 1
Transcript NM_001029955   
Expression
Putative miRNA Targets on DCAF4L1
3'UTR of DCAF4L1
(miRNA target sites are highlighted)		 
>DCAF4L1|NM_001029955|3'UTR
   1 TTCTGCAGGTGGCAGCGCGGCCGAATGTGGATTTGACTTAAGGAAGTTAAGAGTATCTTATTACCGTTTCTGTGAGAGCA
  81 TTTTAAGAGACGTGTTGTATATAGATCGCATCCATCCGGCTGCCAGGGGTAAGGTGTTAAGAGTTTTATGTGGAGACGTT
 161 CTTGTAAAGTTATTTCAGTTAAACTGTGGACTTAACTTGAAAGTCCTTTTCATAAAAGGTACCTGTTTCCTCTTGTTGAA
 241 TGCCTTAGAACAGTTAACCACCTCCCCAACCCTTTTTTTTTTTAAATAATTAAGACTTTTCTAAGGACTGAAGATTGGCA
 321 AAAACTAAAATAAATTAAAGCAGCTTCTTTCACTAGTAGCCCTTTAGAGAAGCATAATGATGGTACTGGTAAGACTGTTT
 401 GACTAATCATACAGGGTCCCAGGCATCTGCGCTTGAGGAAGCCAGTGGGAGTGGAGACAAGGGAGAGGTAATTTCTCAGA
 481 GTCTCTACAGAAATATTTAAGGCTGGAGTTTGGAATCATTAAATTTGGCCTTCTCAAACTCAATAGCAGATCTCTTAAGG
 561 TTCTCCTTTTATTGTTATCATCCATAGGCATTGGAAGGAAAGATGGATCTTTTTAAATACTAGAAGTTTTAAACAGTCCT
 641 TGATGTGCTTTTGTTGAGGTACCTTTCAGAATGTAAGGTACAGCAGCTCCGGTTTCTATTATGGTGACTTGAAGTTCAGA
 721 TTCAAGGAATTGGCTTTGACTTTTTGTAATCTAGGAGCAGCAGTTTGTGAGAGATTTATTAAAAATGTTAAAGAGCCTGT
 801 TTTTCTACTAAGCAAGGAAGAAAAAAAACGTGTAATAAGGTTAGTTGCTACTTCTTAATAGCCAAAGCCTGGAAATGATC
 881 TGAATTTCGAAAATGCTAAAATTCGTGATATAATCATACAATCGGATACTGCATAATAATAGAAAATAAGGCACACTTGC
 961 TATGTGAAACAGTATGGACCAATCTCAACATGTTGACTGAAATTAGGTAGAAATGAGTACAAACTGTATGATTCAATTCT
1041 AAAGTTCAAAAGCAGTAAAAACTTGTCTATGGTGATTAAAGGTAGAGTAGTACGTACCTCTGTAGAAAGAAAGGATTTTT
1121 TTTTCTTTTTCTTTTTAGGATGTTTGAGAAGTGACATGGGGAAGCTTTAGGAATGCTGAGTTTTCTTTATCTTGACACTT
1201 GATACATACGTAATTCATATATCTATATGCTTCACGTTTTTATAGTTTACTGTATATATGTTATTCCTCAAAAAATAAAA
1281 ATAAGCAATTAGGACACTATTGTAGTTAGGCAAGGGACAATGATGCCTTGGACCTGCATGTGTGAGAAGTAGAAATGATC
1361 AGAAATGATTGCATTGGAAGATCATTCGAAGGTAGTATTATTGATAAGGCTTGCTGATGAGAGTAAACTAGAAAGTGAAA
1441 GAAAAAAGGATGGCAGCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCCTTCTGTCGCCCAGGCTGGAGTGCAGTGGCGC
1521 GATCTCGGCTCACTGCAAGCTCTGAGGATGGCAGCTTTTTTGTTAACTTTAGAACTGGTAGATGATGGTGTCGTTTACTA
1601 ACCTGGGGAGGATGAGGAGAAAAAACTTTAGGTGAAGGGAATGATGCTGAGTTTTAGACATCTACTAAACCTCCAATTGG
1681 AGATACAAAGTATTCTGCAGATCAGGGGTCATGTCATGGCTGGTAATACAAATTTGGTGACTTCAATACATAGAATTAAA
1761 ATAGATGGGATAGATGTGCTTTATATGACATAGATGAGGTTAATGTAATTACATATTGATAGAAGATGAGTAGATCAATA
1841 GAGAAGATATGGGAGTATGGTTAGGCACAGATTTTTGGAATCCTTTCAGTCAGTTTTTTATACTAACTTGATATGTGACA
1921 TGAGAAATTGTGTAAGCTTTACTTGCTGTTGTTTCTTCAGTGTAAAATGTCTTAGATAATAAAACTAAATGATAAAGTAG
2001 ATACAGGGTTAAAGGATATGTATCTTGTCCCTTTTACATTGTAAGCATTCAAAATAAAACAAAACAATTAATGAAGAAAA
2081 GACATTGCAATCATTCAGTAAGAACTAGCTGCAGACATATATATGTATATATATATATGTCTGATACTGATATGTCATTT
2161 ATTTGGCAATTGACAAAAAATGACTACATAACTTGATAAACTGTTTATCCTCATTTGCAAAGAAAACAAATGCAAAAAAA
2241 AAATCAGTAAGAAAAACACACCTAAAAGAAAGGGAGGCAATAGTCTTGAATAGGAGAAAAAGAGGAGATCCAAATGGCTA
2321 ATATACATTTGAAAAGGCATCCAACTTCTTTTATTGTCAAGGAAATGCAAATTAAAACCACAATGCCACACCACTTTCAC
2401 TATAATGGTTAAAATAAAATAGATCAGGTGGAGTGACGTTGGGAATTAAAAGAGAAGCAAATGTTGGTGCAGTTGTGAGC
2481 AAATAGAACTTTCATATACTGTTGAGTGTATACTGGTACAAGCACTTGGAAAAGTTAGTAATTGCTAAAGCTAGAAGTTT
2561 GCATACTCTATGACCCAGTCATTTCAGTCCTAGGAATATATTAATCAGAAATGCATACCTGTGTCCACCATAATTTGTTA
2641 ATAGCTCCAACTGGAAACTACCCAAATGTTCATTAATAGTAGAGTGGATAAATTGTGGGATATTAACACAATGGAATCCT
2721 TTTTGCAGTGAGAATGAGCATAGCACTATGGACAAATCCTGCAAACATAATGTTGAAATAAAGATGCCAAACACAAAAGA
2801 GCACATATTGTACAACTAATGCACATAAAGTCCCTAAACAGGCAAAATGAATCTATGTTCTTAGAAGCAGGATTAATGGT
2881 ATACTTGTAGGGCAGAAGAGTAGTGACCAGAAGAAGATTCTAGGAAGCTAGCAATGCTGGTGTCATGCCAGACCCCTAGT
2961 GACTCCAATAGTAATGGCACTGTGTCCGAGAGTCCAAAGAAGATGCGTAGACAGCGAACAAGACTTGGGTTTATTGGGGG
3041 AACTTATATATAGGGATGGTCCAGTGGTAGTAGGCTGGACAGAAGAACCACTACTGTTTGTAAAAAGCATGCAGTTTATA
3121 TAGCATTTTCATTTAGCACACTCCACCTAGCAACCTCCATTTAACCCAAAGCAAAGGACCTTGATCCCCTATATTGCCTG
3201 TGTTGTAAGGGATGGGCTGGGGGTTCAGACGTCCTTCATAGATAAGGAGTGAAACTCAGGGTTAGTCGCTCCTGTTTCCT
3281 TAGTTTGGGATTCTGAGCACACATTCGTTTTAGATCACAGGGTCGTTCTCAGGATATGGTTGTTACTGCTGTCAGGTGCA
3361 TCCTCTCTATAGCGGGGTACTGGCTACACAGTTTTTGTTCACTAGTGATAATTGTTAGAGCTATGCCCTTAATATATGTC
3441 TTGTGTGTATTATACTTCAATAAAAAGTTAAATTTTAAAAAACC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaucGGAGGUA---CUUAAGACUac 5'
              |||: :|   |:|||||||  
Target 5' gtttCCTTAGTTTGGGATTCTGAgc 3'
 3274 - 3298 138.00 -14.10
2 
miRNA  3' gaucggagguacuuaAGACUAc 5'
                         |||||| 
Target 5' gtatatatatatatgTCTGATa 3'
 2125 - 2146 120.00 -5.60
3 
miRNA  3' gaUCGGAGGUACUUAAGACUac 5'
            || ||::| |||| ||||  
Target 5' gaAG-CTTTAGGAATGCTGAgt 3'
 1161 - 1181 119.00 -12.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN15623811 7 COSMIC
COSN7490795 18 COSMIC
COSN26972847 21 COSMIC
COSN26438375 23 COSMIC
COSN31587802 24 COSMIC
COSN30147352 27 COSMIC
COSN26972846 29 COSMIC
COSN30617898 44 COSMIC
COSN31601794 58 COSMIC
COSN14112499 67 COSMIC
COSN30127817 68 COSMIC
COSN31505511 88 COSMIC
COSN30123752 96 COSMIC
COSN30134801 109 COSMIC
COSN30130054 112 COSMIC
COSN30709509 119 COSMIC
COSN26575128 182 COSMIC
COSN30134625 212 COSMIC
COSN20100015 284 COSMIC
COSN27470295 284 COSMIC
COSN16055261 285 COSMIC
COSN28083123 287 COSMIC
COSN30538008 287 COSMIC
COSN30129115 294 COSMIC
COSN28793204 296 COSMIC
COSN16908830 354 COSMIC
COSN31539292 384 COSMIC
COSN30124688 386 COSMIC
COSN7490796 387 COSMIC
COSN31523486 405 COSMIC
COSN28725274 425 COSMIC
COSN28776615 436 COSMIC
COSN26677870 442 COSMIC
COSN31606705 491 COSMIC
COSN31572763 503 COSMIC
COSN30134618 534 COSMIC
COSN31557590 611 COSMIC
COSN31527699 615 COSMIC
COSN31545049 640 COSMIC
COSN30510413 652 COSMIC
COSN31541116 720 COSMIC
COSN31528670 794 COSMIC
COSN15623812 817 COSMIC
COSN31545030 826 COSMIC
COSN25434973 829 COSMIC
COSN15623813 862 COSMIC
COSN30138130 890 COSMIC
COSN15080398 906 COSMIC
COSN15623814 926 COSMIC
COSN31534788 1001 COSMIC
COSN30136778 1059 COSMIC
COSN28201445 1095 COSMIC
COSN31778385 1237 COSMIC
COSN22727366 1286 COSMIC
COSN6830917 1292 COSMIC
COSN30113260 1349 COSMIC
COSN17181422 1395 COSMIC
COSN26562456 1404 COSMIC
COSN7490797 1448 COSMIC
COSN31572044 1457 COSMIC
COSN8490752 1477 COSMIC
COSN8490753 1478 COSMIC
COSN30529418 1481 COSMIC
COSN8490754 1519 COSMIC
COSN31512897 1520 COSMIC
COSN31548608 1522 COSMIC
COSN24223796 1556 COSMIC
COSN30113432 1573 COSMIC
COSN31492772 1711 COSMIC
COSN30114194 1732 COSMIC
COSN15661584 1745 COSMIC
COSN31548211 1754 COSMIC
COSN30142862 1756 COSMIC
COSN30142577 1925 COSMIC
COSN30141514 2064 COSMIC
COSN14660510 2126 COSMIC
COSN30122469 2165 COSMIC
COSN31610004 2223 COSMIC
COSN31569695 2230 COSMIC
COSN31519556 2284 COSMIC
COSN26556789 2357 COSMIC
COSN26553106 2480 COSMIC
COSN30134960 2487 COSMIC
COSN31523918 2603 COSMIC
COSN30540803 2672 COSMIC
COSN30132453 2696 COSMIC
COSN30132483 2697 COSMIC
COSN31585446 2717 COSMIC
COSN31517024 2733 COSMIC
COSN31530766 2812 COSMIC
COSN26553404 2891 COSMIC
COSN30140082 2914 COSMIC
COSN30111380 2929 COSMIC
COSN30133542 2950 COSMIC
COSN30510703 3029 COSMIC
COSN8490755 3064 COSMIC
COSN29988252 3132 COSMIC
COSN26665187 3141 COSMIC
COSN31484341 3155 COSMIC
COSN30532992 3243 COSMIC
COSN30538147 3255 COSMIC
COSN30114441 3269 COSMIC
COSN22279453 3272 COSMIC
COSN16415285 3308 COSMIC
COSN7638858 3326 COSMIC
COSN30131364 3398 COSMIC
COSN30119406 3430 COSMIC
COSN30113128 3472 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1385935568 6 dbSNP
rs757242826 14 dbSNP
rs1327767284 15 dbSNP
rs762743502 16 dbSNP
rs1461236730 17 dbSNP
rs374930244 18 dbSNP
rs766364920 18 dbSNP
rs1166894685 19 dbSNP
rs752037303 19 dbSNP
rs374252051 20 dbSNP
rs750964592 23 dbSNP
rs901698906 24 dbSNP
rs756541538 29 dbSNP
rs780150975 39 dbSNP
rs749352275 40 dbSNP
rs957751495 43 dbSNP
rs755256295 44 dbSNP
rs779108413 46 dbSNP
rs529091462 47 dbSNP
rs751413439 47 dbSNP
rs1189660535 52 dbSNP
rs1248673058 53 dbSNP
rs1051156582 56 dbSNP
rs1207906211 62 dbSNP
rs780788596 66 dbSNP
rs745676380 71 dbSNP
rs1263451801 73 dbSNP
rs1329409607 81 dbSNP
rs1390769809 90 dbSNP
rs1006890880 97 dbSNP
rs1462605732 100 dbSNP
rs987405351 101 dbSNP
rs2660332 102 dbSNP
rs758554008 108 dbSNP
rs574187882 109 dbSNP
rs562595420 115 dbSNP
rs531359575 116 dbSNP
rs779737425 118 dbSNP
rs1182679189 121 dbSNP
rs1482999849 126 dbSNP
rs1250336374 132 dbSNP
rs551055275 135 dbSNP
rs772660793 139 dbSNP
rs919914770 139 dbSNP
rs1490620346 140 dbSNP
rs1288623328 149 dbSNP
rs1207735590 152 dbSNP
rs931339667 154 dbSNP
rs961199577 156 dbSNP
rs1237786066 157 dbSNP
rs1348541705 158 dbSNP
rs570894315 159 dbSNP
rs1405258125 162 dbSNP
rs1409353712 165 dbSNP
rs1403788934 170 dbSNP
rs774170678 200 dbSNP
rs1159217687 202 dbSNP
rs1055194585 207 dbSNP
rs1410327310 213 dbSNP
rs1202235658 214 dbSNP
rs1480946222 215 dbSNP
rs1246514778 219 dbSNP
rs895249327 224 dbSNP
rs1219890548 225 dbSNP
rs1448340430 229 dbSNP
rs527411831 230 dbSNP
rs916712629 231 dbSNP
rs547085736 232 dbSNP
rs566762475 233 dbSNP
rs1158911831 236 dbSNP
rs1224069288 244 dbSNP
rs1366881361 248 dbSNP
rs1407375046 254 dbSNP
rs969147546 257 dbSNP
rs1432722304 262 dbSNP
rs1328415703 265 dbSNP
rs979149709 269 dbSNP
rs1386587045 270 dbSNP
rs1471158395 270 dbSNP
rs1470576950 271 dbSNP
rs1301647683 272 dbSNP
rs924969222 272 dbSNP
rs1013390720 273 dbSNP
rs1244418479 273 dbSNP
rs34302641 273 dbSNP
rs1203796742 274 dbSNP
rs1216051721 284 dbSNP
rs1276494624 284 dbSNP
rs535630876 284 dbSNP
rs76120361 285 dbSNP
rs1392056767 286 dbSNP
rs1298560475 287 dbSNP
rs1309181244 288 dbSNP
rs1348862262 289 dbSNP
rs1434678913 290 dbSNP
rs902388971 291 dbSNP
rs999406976 297 dbSNP
rs748935687 317 dbSNP
rs768280466 319 dbSNP
rs1325476454 325 dbSNP
rs1411960332 331 dbSNP
rs957699646 335 dbSNP
rs1420694814 342 dbSNP
rs1168402061 346 dbSNP
rs1050220557 348 dbSNP
rs115602445 348 dbSNP
rs375150877 352 dbSNP
rs1482653216 354 dbSNP
rs1235602729 355 dbSNP
rs954630216 366 dbSNP
rs1480896540 367 dbSNP
rs1197042504 372 dbSNP
rs986965956 373 dbSNP
rs1273624927 381 dbSNP
rs1225954184 384 dbSNP
rs569419339 387 dbSNP
rs771569400 389 dbSNP
rs1471970961 396 dbSNP
rs538518661 396 dbSNP
rs1199782072 397 dbSNP
rs961598459 403 dbSNP
rs972975486 412 dbSNP
rs1038401569 413 dbSNP
rs920216735 416 dbSNP
rs190592716 424 dbSNP
rs1301551253 425 dbSNP
rs183305755 431 dbSNP
rs559964691 433 dbSNP
rs994177538 445 dbSNP
rs1307800334 460 dbSNP
rs1428281374 463 dbSNP
rs1359123582 468 dbSNP
rs1462882824 474 dbSNP
rs2660334 479 dbSNP
rs1368852265 482 dbSNP
rs1178483187 488 dbSNP
rs1409255242 491 dbSNP
rs1251075830 498 dbSNP
rs1202746809 499 dbSNP
rs916631315 504 dbSNP
rs772044919 514 dbSNP
rs1304037593 520 dbSNP
rs540773227 521 dbSNP
rs1347567403 522 dbSNP
rs949518617 524 dbSNP
rs1294170914 531 dbSNP
rs1222614387 534 dbSNP
rs960992216 544 dbSNP
rs1412793398 545 dbSNP
rs1013824269 555 dbSNP
rs1351625013 559 dbSNP
rs1023825053 563 dbSNP
rs114987906 571 dbSNP
rs1367886660 572 dbSNP
rs902332000 573 dbSNP
rs1229597413 577 dbSNP
rs1272385697 579 dbSNP
rs1457078660 582 dbSNP
rs150707602 584 dbSNP
rs563778779 585 dbSNP
rs956607873 586 dbSNP
rs893758097 588 dbSNP
rs1179962962 592 dbSNP
rs1270620582 593 dbSNP
rs995763262 598 dbSNP
rs188607304 603 dbSNP
rs139036831 607 dbSNP
rs890186792 613 dbSNP
rs1488275250 617 dbSNP
rs765568294 622 dbSNP
rs1217964018 630 dbSNP
rs1329942998 646 dbSNP
rs1014702455 649 dbSNP
rs1227117966 661 dbSNP
rs1166666289 663 dbSNP
rs531542138 667 dbSNP
rs1347991739 669 dbSNP
rs545264733 679 dbSNP
rs972932776 681 dbSNP
rs386673913 685 dbSNP
rs75483306 686 dbSNP
rs116342028 687 dbSNP
rs2660335 690 dbSNP
rs1387303942 692 dbSNP
rs1156377620 695 dbSNP
rs916582431 699 dbSNP
rs949442170 709 dbSNP
rs542105455 712 dbSNP
rs924088432 724 dbSNP
rs1293146695 725 dbSNP
rs1038454775 730 dbSNP
rs566974188 731 dbSNP
rs1383672852 733 dbSNP
rs898570888 735 dbSNP
rs1431238225 743 dbSNP
rs1265455769 744 dbSNP
rs1053557026 755 dbSNP
rs192061688 758 dbSNP
rs1465366272 762 dbSNP
rs549349268 764 dbSNP
rs1246115005 768 dbSNP
rs1326276239 776 dbSNP
rs1257157504 777 dbSNP
rs1232919244 778 dbSNP
rs149897467 788 dbSNP
rs1013876567 789 dbSNP
rs1435332897 790 dbSNP
rs1319563837 792 dbSNP
rs1220442704 794 dbSNP
rs1317948321 797 dbSNP
rs1454169028 805 dbSNP
rs1402747907 809 dbSNP
rs1242330916 813 dbSNP
rs890102200 814 dbSNP
rs1190859152 817 dbSNP
rs1246762459 818 dbSNP
rs1023875740 821 dbSNP
rs1464325008 821 dbSNP
rs1008605112 822 dbSNP
rs1435362148 824 dbSNP
rs751647764 834 dbSNP
rs1450295574 844 dbSNP
rs1449326186 851 dbSNP
rs1015082069 855 dbSNP
rs1444213935 859 dbSNP
rs1257396882 860 dbSNP
rs73233783 868 dbSNP
rs1482591019 880 dbSNP
rs1253412608 882 dbSNP
rs1376537720 889 dbSNP
rs1340998948 892 dbSNP
rs1294960301 902 dbSNP
rs552096883 905 dbSNP
rs184052654 906 dbSNP
rs1394197387 907 dbSNP
rs1345986773 908 dbSNP
rs1398600444 909 dbSNP
rs1308408788 912 dbSNP
rs1458637903 914 dbSNP
rs1428938865 919 dbSNP
rs1370124574 920 dbSNP
rs879167889 921 dbSNP
rs1166953887 922 dbSNP
rs867792709 924 dbSNP
rs1030011728 929 dbSNP
rs1206239441 933 dbSNP
rs952912055 934 dbSNP
rs954363327 937 dbSNP
rs986032367 941 dbSNP
rs1211292161 942 dbSNP
rs1364376792 947 dbSNP
rs1453208573 952 dbSNP
rs1242069055 953 dbSNP
rs1285865704 955 dbSNP
rs991467413 956 dbSNP
rs1023913206 974 dbSNP
rs1408922658 975 dbSNP
rs910464830 983 dbSNP
rs1407260557 993 dbSNP
rs1391810628 994 dbSNP
rs1456464295 998 dbSNP
rs941901516 1000 dbSNP
rs971132958 1002 dbSNP
rs1472438974 1008 dbSNP
rs1250040227 1031 dbSNP
rs1318310062 1040 dbSNP
rs1210979713 1042 dbSNP
rs1266565230 1048 dbSNP
rs1451821869 1056 dbSNP
rs767518051 1060 dbSNP
rs1464720003 1066 dbSNP
rs768413761 1067 dbSNP
rs919063521 1074 dbSNP
rs1268644866 1082 dbSNP
rs1227685343 1083 dbSNP
rs76330961 1089 dbSNP
rs1284953980 1093 dbSNP
rs1437001114 1094 dbSNP
rs923992706 1095 dbSNP
rs935418798 1099 dbSNP
rs1323142140 1103 dbSNP
rs141881445 1104 dbSNP
rs989247320 1104 dbSNP
rs1390950062 1105 dbSNP
rs1160066299 1113 dbSNP
rs1174667614 1116 dbSNP
rs1478568842 1116 dbSNP
rs200452495 1116 dbSNP
rs896509968 1116 dbSNP
rs1045376248 1120 dbSNP
rs566534698 1120 dbSNP
rs75709625 1120 dbSNP
rs1471879044 1121 dbSNP
rs1326978035 1123 dbSNP
rs1181303166 1125 dbSNP
rs1280664752 1125 dbSNP
rs1409024473 1126 dbSNP
rs1344068047 1127 dbSNP
rs1232338517 1132 dbSNP
rs1367674555 1132 dbSNP
rs1473656407 1132 dbSNP
rs1156697616 1135 dbSNP
rs1387703616 1137 dbSNP
rs1434544602 1138 dbSNP
rs1470117056 1141 dbSNP
rs931860387 1143 dbSNP
rs1336723877 1160 dbSNP
rs779783046 1164 dbSNP
rs892598938 1165 dbSNP
rs1446697518 1166 dbSNP
rs1009346742 1179 dbSNP
rs1450937055 1182 dbSNP
rs1390463882 1190 dbSNP
rs1030473814 1198 dbSNP
rs1463161250 1199 dbSNP
rs1239087296 1200 dbSNP
rs911849466 1201 dbSNP
rs1210753951 1202 dbSNP
rs753530999 1206 dbSNP
rs368305197 1207 dbSNP
rs147592712 1210 dbSNP
rs536735199 1211 dbSNP
rs1230426698 1213 dbSNP
rs994603259 1219 dbSNP
rs1344571445 1224 dbSNP
rs1017188650 1226 dbSNP
rs1227675110 1237 dbSNP
rs1359994035 1243 dbSNP
rs1286422505 1245 dbSNP
rs1351966732 1249 dbSNP
rs1449371726 1251 dbSNP
rs1359160983 1255 dbSNP
rs374974829 1256 dbSNP
rs1370718602 1257 dbSNP
rs1167604853 1272 dbSNP
rs888597849 1273 dbSNP
rs1415299984 1276 dbSNP
rs973701113 1280 dbSNP
rs1472425603 1284 dbSNP
rs1012455893 1288 dbSNP
rs1201365577 1289 dbSNP
rs564338661 1300 dbSNP
rs1266301198 1301 dbSNP
rs1275573090 1308 dbSNP
rs982926911 1321 dbSNP
rs917999559 1327 dbSNP
rs1281374292 1332 dbSNP
rs1441150913 1334 dbSNP
rs1292106281 1335 dbSNP
rs1229019795 1339 dbSNP
rs1379008336 1342 dbSNP
rs1024298530 1348 dbSNP
rs1209509114 1359 dbSNP
rs1233469965 1363 dbSNP
rs1473604374 1372 dbSNP
rs1180372620 1374 dbSNP
rs1333760480 1375 dbSNP
rs971011278 1381 dbSNP
rs1411466218 1384 dbSNP
rs868086411 1389 dbSNP
rs949416481 1393 dbSNP
rs576181914 1395 dbSNP
rs1460121254 1396 dbSNP
rs544941225 1399 dbSNP
rs936920276 1400 dbSNP
rs1054432748 1405 dbSNP
rs1411454950 1422 dbSNP
rs186818233 1424 dbSNP
rs1184299606 1432 dbSNP
rs1413782935 1436 dbSNP
rs1329442514 1437 dbSNP
rs1371944521 1438 dbSNP
rs1407420282 1441 dbSNP
rs1250773952 1442 dbSNP
rs1472767959 1442 dbSNP
rs1491301087 1456 dbSNP
rs1479771618 1457 dbSNP
rs1491376298 1457 dbSNP
rs1293760498 1458 dbSNP
rs1369216861 1458 dbSNP
rs369655253 1458 dbSNP
rs71198696 1458 dbSNP
rs79561731 1458 dbSNP
rs879092124 1458 dbSNP
rs1435080870 1460 dbSNP
rs1391679373 1475 dbSNP
rs373513707 1477 dbSNP
rs377460241 1478 dbSNP
rs1319507859 1479 dbSNP
rs1457676608 1485 dbSNP
rs1343509562 1489 dbSNP
rs956757326 1492 dbSNP
rs1219213429 1496 dbSNP
rs892656353 1497 dbSNP
rs1275968451 1498 dbSNP
rs1434691337 1503 dbSNP
rs1269687915 1509 dbSNP
rs989507954 1512 dbSNP
rs1192013282 1513 dbSNP
rs915367927 1520 dbSNP
rs1010144686 1521 dbSNP
rs1251182079 1533 dbSNP
rs1051554932 1539 dbSNP
rs532933768 1543 dbSNP
rs571708530 1551 dbSNP
rs1203080560 1554 dbSNP
rs540593442 1563 dbSNP
rs953328402 1566 dbSNP
rs560662961 1571 dbSNP
rs985991797 1576 dbSNP
rs911760646 1579 dbSNP
rs944659852 1580 dbSNP
rs1036001632 1581 dbSNP
rs78170005 1585 dbSNP
rs747692778 1586 dbSNP
rs758885140 1593 dbSNP
rs1048839361 1594 dbSNP
rs1026646998 1601 dbSNP
rs1327734796 1604 dbSNP
rs1477572388 1605 dbSNP
rs1168463533 1607 dbSNP
rs950614197 1613 dbSNP
rs993078342 1620 dbSNP
rs1393562653 1624 dbSNP
rs917049980 1630 dbSNP
rs894262760 1637 dbSNP
rs970819562 1637 dbSNP
rs1012794134 1639 dbSNP
rs1203924774 1647 dbSNP
rs549848516 1656 dbSNP
rs1167371852 1661 dbSNP
rs764604149 1665 dbSNP
rs562982859 1671 dbSNP
rs1365812125 1672 dbSNP
rs1345220247 1676 dbSNP
rs1299367761 1682 dbSNP
rs1388091513 1689 dbSNP
rs771294490 1701 dbSNP
rs1456631197 1704 dbSNP
rs531895663 1706 dbSNP
rs1363857130 1716 dbSNP
rs1292880292 1721 dbSNP
rs936649788 1727 dbSNP
rs1156943136 1732 dbSNP
rs1402904482 1745 dbSNP
rs906753459 1753 dbSNP
rs1003810658 1757 dbSNP
rs191229779 1761 dbSNP
rs1054080074 1768 dbSNP
rs1373794388 1774 dbSNP
rs571942983 1778 dbSNP
rs956684274 1786 dbSNP
rs1450114894 1789 dbSNP
rs1329775783 1790 dbSNP
rs182745422 1792 dbSNP
rs16853848 1793 dbSNP
rs567628561 1794 dbSNP
rs1022304605 1795 dbSNP
rs1187594783 1797 dbSNP
rs1344872126 1802 dbSNP
rs1226284293 1813 dbSNP
rs1484912913 1820 dbSNP
rs1276273287 1831 dbSNP
rs1205400681 1832 dbSNP
rs953492468 1840 dbSNP
rs1341065630 1843 dbSNP
rs1249105683 1846 dbSNP
rs890596661 1847 dbSNP
rs551794000 1851 dbSNP
rs986347518 1855 dbSNP
rs2581439 1858 dbSNP
rs773088170 1858 dbSNP
rs556611082 1861 dbSNP
rs1038744102 1871 dbSNP
rs1211927675 1873 dbSNP
rs1396130402 1874 dbSNP
rs971957389 1883 dbSNP
rs898877090 1885 dbSNP
rs1369509542 1886 dbSNP
rs1287954543 1906 dbSNP
rs1474540833 1908 dbSNP
rs1254373943 1912 dbSNP
rs1183433735 1914 dbSNP
rs576165153 1915 dbSNP
rs4410557 1918 dbSNP
rs1247992194 1922 dbSNP
rs1450873203 1922 dbSNP
rs1211040868 1933 dbSNP
rs994904213 1937 dbSNP
rs1272424817 1940 dbSNP
rs1231360954 1947 dbSNP
rs1331191878 1950 dbSNP
rs144441211 1956 dbSNP
rs1447510912 1967 dbSNP
rs1187405237 1968 dbSNP
rs1385379506 1973 dbSNP
rs1335341530 1974 dbSNP
rs1388539367 1976 dbSNP
rs1458987318 1976 dbSNP
rs1391512320 1979 dbSNP
rs149814888 1986 dbSNP
rs1460333978 1987 dbSNP
rs746400814 1991 dbSNP
rs1389535753 1992 dbSNP
rs1457259224 1994 dbSNP
rs1414909616 1999 dbSNP
rs1160288695 2009 dbSNP
rs1014147200 2012 dbSNP
rs1361667185 2014 dbSNP
rs1405160595 2015 dbSNP
rs984462781 2016 dbSNP
rs915605660 2019 dbSNP
rs1367995891 2020 dbSNP
rs1451873297 2026 dbSNP
rs948514487 2030 dbSNP
rs558445781 2031 dbSNP
rs1466191577 2032 dbSNP
rs1332958074 2038 dbSNP
rs1024156941 2045 dbSNP
rs370029842 2046 dbSNP
rs906686100 2048 dbSNP
rs980875074 2051 dbSNP
rs1297507376 2053 dbSNP
rs757741422 2056 dbSNP
rs1033758619 2057 dbSNP
rs1331966709 2061 dbSNP
rs1325285221 2065 dbSNP
rs779437600 2066 dbSNP
rs1263924960 2070 dbSNP
rs989893995 2072 dbSNP
rs1209126463 2073 dbSNP
rs571972194 2087 dbSNP
rs1463366146 2091 dbSNP
rs1208102683 2092 dbSNP
rs1052631157 2093 dbSNP
rs770189048 2097 dbSNP
rs987671030 2103 dbSNP
rs1214954342 2110 dbSNP
rs912087970 2115 dbSNP
rs1200881324 2117 dbSNP
rs1348798078 2117 dbSNP
rs943539523 2117 dbSNP
rs1302954601 2120 dbSNP
rs1232127463 2122 dbSNP
rs1367560194 2124 dbSNP
rs372013647 2126 dbSNP
rs376528954 2126 dbSNP
rs540907791 2126 dbSNP
rs772593896 2126 dbSNP
rs560771888 2128 dbSNP
rs1047870585 2130 dbSNP
rs1391378165 2132 dbSNP
rs886075903 2133 dbSNP
rs1455948486 2135 dbSNP
rs1239146470 2136 dbSNP
rs1187909848 2140 dbSNP
rs1485239145 2142 dbSNP
rs1279823294 2146 dbSNP
rs1208974875 2148 dbSNP
rs1320530877 2148 dbSNP
rs766061428 2157 dbSNP
rs1344631983 2158 dbSNP
rs1403476310 2159 dbSNP
rs753720463 2160 dbSNP
rs1214122627 2163 dbSNP
rs1360426640 2170 dbSNP
rs1286476805 2173 dbSNP
rs1397892933 2177 dbSNP
rs1310577773 2183 dbSNP
rs1311483200 2185 dbSNP
rs1411269892 2189 dbSNP
rs889171753 2193 dbSNP
rs1340106985 2197 dbSNP
rs538090783 2199 dbSNP
rs759669910 2204 dbSNP
rs1007631343 2207 dbSNP
rs765430547 2210 dbSNP
rs1163791897 2211 dbSNP
rs1474869029 2218 dbSNP
rs1290438684 2224 dbSNP
rs1019471645 2229 dbSNP
rs1227526930 2232 dbSNP
rs1233684629 2234 dbSNP
rs1292589674 2234 dbSNP
rs200746238 2234 dbSNP
rs574366946 2242 dbSNP
rs374618079 2260 dbSNP
rs1024207744 2262 dbSNP
rs905732017 2263 dbSNP
rs1484169664 2265 dbSNP
rs1412078841 2269 dbSNP
rs965903892 2278 dbSNP
rs775775268 2283 dbSNP
rs1297281785 2287 dbSNP
rs1032811009 2292 dbSNP
rs1026201933 2294 dbSNP
rs1351094964 2307 dbSNP
rs1198248186 2309 dbSNP
rs1254946196 2325 dbSNP
rs1460855221 2326 dbSNP
rs958365512 2328 dbSNP
rs1161038772 2331 dbSNP
rs951943649 2334 dbSNP
rs1472801149 2338 dbSNP
rs1408939166 2344 dbSNP
rs989555762 2345 dbSNP
rs1021404162 2347 dbSNP
rs763104728 2352 dbSNP
rs915590800 2353 dbSNP
rs987723082 2354 dbSNP
rs912138634 2361 dbSNP
rs948417486 2367 dbSNP
rs943591858 2370 dbSNP
rs981193218 2382 dbSNP
rs1317919046 2384 dbSNP
rs928410864 2387 dbSNP
rs1306797630 2390 dbSNP
rs1221687046 2391 dbSNP
rs1369368457 2392 dbSNP
rs1303487192 2394 dbSNP
rs1439540768 2395 dbSNP
rs1392123220 2405 dbSNP
rs1322507579 2410 dbSNP
rs1454080001 2410 dbSNP
rs187035818 2420 dbSNP
rs1471828081 2421 dbSNP
rs930403191 2429 dbSNP
rs563349551 2434 dbSNP
rs531834078 2439 dbSNP
rs1397129950 2440 dbSNP
rs1194266020 2444 dbSNP
rs1453904352 2448 dbSNP
rs1251622007 2453 dbSNP
rs1211101183 2455 dbSNP
rs769386997 2462 dbSNP
rs1260503299 2464 dbSNP
rs1214165901 2465 dbSNP
rs1313528203 2470 dbSNP
rs892697029 2473 dbSNP
rs1467976202 2477 dbSNP
rs1368180845 2482 dbSNP
rs1301591529 2484 dbSNP
rs886125943 2485 dbSNP
rs1410480708 2490 dbSNP
rs946984521 2493 dbSNP
rs147849863 2495 dbSNP
rs565463866 2497 dbSNP
rs1467392111 2500 dbSNP
rs889105411 2508 dbSNP
rs1348800715 2509 dbSNP
rs774371769 2520 dbSNP
rs1045712576 2523 dbSNP
rs1019021797 2524 dbSNP
rs1301632335 2531 dbSNP
rs1054307898 2533 dbSNP
rs1195504483 2533 dbSNP
rs1261658411 2538 dbSNP
rs1185078029 2541 dbSNP
rs901931548 2544 dbSNP
rs567972944 2559 dbSNP
rs1484463176 2561 dbSNP
rs1280543784 2568 dbSNP
rs1255313861 2569 dbSNP
rs993291549 2569 dbSNP
rs528020166 2575 dbSNP
rs1276136938 2591 dbSNP
rs892959733 2600 dbSNP
rs761900655 2620 dbSNP
rs1293387064 2624 dbSNP
rs1397509499 2628 dbSNP
rs528486143 2637 dbSNP
rs1312092799 2662 dbSNP
rs1026169275 2663 dbSNP
rs1342322289 2668 dbSNP
rs1021035603 2669 dbSNP
rs951912726 2670 dbSNP
rs1169667698 2679 dbSNP
rs372193212 2680 dbSNP
rs967147985 2682 dbSNP
rs548106648 2685 dbSNP
rs1168986658 2701 dbSNP
rs375904075 2708 dbSNP
rs1249208511 2710 dbSNP
rs1482486548 2711 dbSNP
rs767540911 2712 dbSNP
rs1268564628 2715 dbSNP
rs1435272680 2720 dbSNP
rs1023325332 2726 dbSNP
rs370977231 2741 dbSNP
rs1174624174 2747 dbSNP
rs1394979696 2749 dbSNP
rs79472317 2759 dbSNP
rs141482149 2765 dbSNP
rs1368952156 2769 dbSNP
rs928367467 2769 dbSNP
rs748995030 2770 dbSNP
rs1441832759 2776 dbSNP
rs1335462558 2780 dbSNP
rs1292435863 2791 dbSNP
rs1294340755 2793 dbSNP
rs974938713 2799 dbSNP
rs143608338 2803 dbSNP
rs1331167313 2807 dbSNP
rs1391993154 2810 dbSNP
rs1395841860 2811 dbSNP
rs191720625 2817 dbSNP
rs1296568183 2825 dbSNP
rs988242084 2831 dbSNP
rs1419222905 2833 dbSNP
rs1164572715 2837 dbSNP
rs1365128833 2844 dbSNP
rs1474446906 2844 dbSNP
rs1278040781 2846 dbSNP
rs1182055195 2853 dbSNP
rs1436902140 2855 dbSNP
rs1247797056 2866 dbSNP
rs1384845466 2880 dbSNP
rs920787939 2888 dbSNP
rs2581438 2893 dbSNP
rs1365789576 2894 dbSNP
rs946910836 2899 dbSNP
rs753691146 2902 dbSNP
rs1043981378 2916 dbSNP
rs910830226 2919 dbSNP
rs983644026 2925 dbSNP
rs907607263 2929 dbSNP
rs949749177 2947 dbSNP
rs1239997702 2952 dbSNP
rs1045427078 2954 dbSNP
rs1304885911 2957 dbSNP
rs943349858 2959 dbSNP
rs1395801951 2961 dbSNP
rs1340824363 2967 dbSNP
rs926922295 2969 dbSNP
rs1221931583 2976 dbSNP
rs754637379 2978 dbSNP
rs1387553637 2980 dbSNP
rs1266812087 2981 dbSNP
rs1489699892 2982 dbSNP
rs565537642 2988 dbSNP
rs1054361297 2998 dbSNP
rs993594636 3004 dbSNP
rs148286828 3007 dbSNP
rs568395394 3008 dbSNP
rs1211722812 3015 dbSNP
rs1448707168 3016 dbSNP
rs1284692338 3017 dbSNP
rs1350137251 3028 dbSNP
rs1006503375 3030 dbSNP
rs1284179038 3035 dbSNP
rs752080322 3037 dbSNP
rs1190606751 3044 dbSNP
rs1371785886 3047 dbSNP
rs1302816742 3048 dbSNP
rs1439337005 3053 dbSNP
rs1010063969 3057 dbSNP
rs1388474584 3062 dbSNP
rs970384810 3070 dbSNP
rs902610443 3082 dbSNP
rs1008916155 3090 dbSNP
rs1002522322 3095 dbSNP
rs964670753 3110 dbSNP
rs1035778935 3112 dbSNP
rs140458634 3116 dbSNP
rs988503085 3118 dbSNP
rs1242633616 3120 dbSNP
rs778731842 3121 dbSNP
rs914363623 3126 dbSNP
rs952343972 3140 dbSNP
rs752448181 3146 dbSNP
rs1437258875 3149 dbSNP
rs757892227 3155 dbSNP
rs1295307203 3156 dbSNP
rs150420666 3166 dbSNP
rs980016977 3167 dbSNP
rs1342004204 3170 dbSNP
rs907996662 3171 dbSNP
rs910764310 3172 dbSNP
rs370113866 3181 dbSNP
rs1430400064 3184 dbSNP
rs185277041 3192 dbSNP
rs1338877148 3196 dbSNP
rs1315238353 3201 dbSNP
rs777213713 3218 dbSNP
rs578261785 3219 dbSNP
rs1374538920 3231 dbSNP
rs1171139231 3232 dbSNP
rs1411181031 3244 dbSNP
rs926971080 3250 dbSNP
rs543379791 3267 dbSNP
rs1272879476 3268 dbSNP
rs1040345857 3269 dbSNP
rs1211170750 3272 dbSNP
rs1054815348 3277 dbSNP
rs1475141393 3278 dbSNP
rs1182481452 3279 dbSNP
rs923253614 3283 dbSNP
rs1416238750 3287 dbSNP
rs746369258 3290 dbSNP
rs1208060993 3291 dbSNP
rs1439658069 3294 dbSNP
rs1273865118 3296 dbSNP
rs1422225434 3298 dbSNP
rs113453495 3307 dbSNP
rs556796427 3311 dbSNP
rs914502798 3315 dbSNP
rs929313929 3319 dbSNP
rs190226465 3326 dbSNP
rs1408126011 3331 dbSNP
rs770212731 3338 dbSNP
rs73810449 3339 dbSNP
rs1458587811 3340 dbSNP
rs887894289 3342 dbSNP
rs1006016732 3343 dbSNP
rs1041572509 3345 dbSNP
rs1180314725 3345 dbSNP
rs1044641733 3347 dbSNP
rs565526013 3351 dbSNP
rs1448157039 3352 dbSNP
rs905752270 3357 dbSNP
rs1003192274 3358 dbSNP
rs890932136 3359 dbSNP
rs1214649663 3363 dbSNP
rs1334584579 3370 dbSNP
rs1225106887 3371 dbSNP
rs1232359775 3374 dbSNP
rs1278383437 3375 dbSNP
rs1443944006 3380 dbSNP
rs34943342 3386 dbSNP
rs71687503 3386 dbSNP
rs749683628 3388 dbSNP
rs770059824 3389 dbSNP
rs1326524174 3391 dbSNP
rs1460902936 3392 dbSNP
rs1035595771 3395 dbSNP
rs1161107648 3400 dbSNP
rs527877991 3401 dbSNP
rs1009892208 3410 dbSNP
rs1021296004 3413 dbSNP
rs1230573352 3414 dbSNP
rs1266820551 3424 dbSNP
rs900547844 3427 dbSNP
rs996182841 3428 dbSNP
rs1194767733 3429 dbSNP
rs1210930936 3431 dbSNP
rs1239347677 3435 dbSNP
rs1482313738 3437 dbSNP
rs1028032868 3441 dbSNP
rs888039056 3453 dbSNP
rs1317069262 3454 dbSNP
rs1005521679 3464 dbSNP
rs968875049 3465 dbSNP
rs979601514 3471 dbSNP
rs1372512360 3473 dbSNP
rs1018201448 3478 dbSNP
rs1303559307 3483 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293
Disease 285429.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "HITS-CLIP data was present in GSM714642. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714642
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000333141.5 | 3UTR | UAUAUAUGUAUAUAUAUAUAUGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
LUSC 0.45 0.05 0.482 0.03 15 Click to see details
STAD 0.828 0.19 1.000 0.5 3 Click to see details
BRCA 0.141 0.22 0.122 0.26 31 Click to see details
HNSC -0.14 0.32 -0.266 0.18 14 Click to see details
UCEC 0.51 0.33 0.500 0.33 3 Click to see details
BLCA 0.125 0.41 0.086 0.44 6 Click to see details
LIHC -0.053 0.47 -0.400 0.3 4 Click to see details
LIHC -0.053 0.47 -0.400 0.3 4 Click to see details
LIHC -0.053 0.47 -0.400 0.3 4 Click to see details
LIHC -0.053 0.47 -0.400 0.3 4 Click to see details
LIHC -0.053 0.47 -0.400 0.3 4 Click to see details
LIHC -0.053 0.47 -0.400 0.3 4 Click to see details
LIHC -0.053 0.47 -0.400 0.3 4 Click to see details
80 hsa-miR-2115-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057089 DDIT4 DNA damage inducible transcript 4 2 2
MIRT071216 FCF1 FCF1, rRNA-processing protein 2 2
MIRT226901 RAD23B RAD23 homolog B, nucleotide excision repair protein 2 2
MIRT235961 BACH1 BTB domain and CNC homolog 1 2 2
MIRT294569 ZNF460 zinc finger protein 460 2 4
MIRT321046 RAC1 Rac family small GTPase 1 2 4
MIRT359666 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 2 8
MIRT366451 KLHL15 kelch like family member 15 2 2
MIRT405375 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT441794 TCEAL5 transcription elongation factor A like 5 2 2
MIRT443295 TCEAL3 transcription elongation factor A like 3 2 2
MIRT455275 DDX39B DExD-box helicase 39B 2 2
MIRT458523 C5orf22 chromosome 5 open reading frame 22 2 2
MIRT464960 TWIST1 twist family bHLH transcription factor 1 2 2
MIRT466848 STX6 syntaxin 6 2 2
MIRT469252 RHOB ras homolog family member B 2 2
MIRT469825 RAB14 RAB14, member RAS oncogene family 2 4
MIRT470047 PTGFRN prostaglandin F2 receptor inhibitor 2 2
MIRT471420 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT472024 NPM1 nucleophosmin 1 2 2
MIRT484156 CENPN centromere protein N 2 2
MIRT485490 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT490462 PROSER2 proline and serine rich 2 2 2
MIRT493069 MTCH1 mitochondrial carrier 1 2 2
MIRT493573 HSP90AA1 heat shock protein 90 alpha family class A member 1 2 8
MIRT494919 NDUFC2-KCTD14 NDUFC2-KCTD14 readthrough 2 2
MIRT500439 ZMAT3 zinc finger matrin-type 3 2 2
MIRT500931 SRPR SRP receptor alpha subunit 2 4
MIRT501551 POC1B-GALNT4 POC1B-GALNT4 readthrough 2 2
MIRT501809 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT502415 GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 2 2
MIRT506504 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT507861 CCNE2 cyclin E2 2 2
MIRT510511 YOD1 YOD1 deubiquitinase 2 6
MIRT516073 RAB42 RAB42, member RAS oncogene family 2 2
MIRT519030 KYNU kynureninase 2 6
MIRT521762 PPIL1 peptidylprolyl isomerase like 1 2 4
MIRT522898 KCNJ3 potassium voltage-gated channel subfamily J member 3 2 4
MIRT527370 MGARP mitochondria localized glutamic acid rich protein 2 2
MIRT530691 C8orf46 chromosome 8 open reading frame 46 2 2
MIRT530867 TRUB1 TruB pseudouridine synthase family member 1 2 2
MIRT531832 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT533035 ZBTB5 zinc finger and BTB domain containing 5 2 2
MIRT533165 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT533464 TRIM71 tripartite motif containing 71 2 2
MIRT534331 SHCBP1 SHC binding and spindle associated 1 2 2
MIRT539372 ADSS adenylosuccinate synthase 2 6
MIRT545951 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT553283 TSR1 TSR1, ribosome maturation factor 2 2
MIRT553532 TMEM185B transmembrane protein 185B 2 4
MIRT556480 LIPA lipase A, lysosomal acid type 2 2
MIRT556975 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT557697 GATA6 GATA binding protein 6 2 2
MIRT558901 CCDC58 coiled-coil domain containing 58 2 2
MIRT559224 BLMH bleomycin hydrolase 2 2
MIRT559827 SLPI secretory leukocyte peptidase inhibitor 2 2
MIRT563435 SLC3A2 solute carrier family 3 member 2 2 2
MIRT569270 PCDH11X protocadherin 11 X-linked 2 2
MIRT571386 JKAMP JNK1/MAPK8-associated membrane protein 2 2
MIRT572567 AFF1 AF4/FMR2 family member 1 2 2
MIRT610400 AR androgen receptor 2 2
MIRT611058 ZNF621 zinc finger protein 621 2 2
MIRT635118 TMEM233 transmembrane protein 233 2 2
MIRT641617 DEFB118 defensin beta 118 2 2
MIRT642146 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT647295 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT648155 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT652780 TENM3 teneurin transmembrane protein 3 2 2
MIRT657356 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT658718 ELN elastin 2 2
MIRT662441 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT665302 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT699898 RUNX1 runt related transcription factor 1 2 2
MIRT700921 PDS5A PDS5 cohesin associated factor A 2 2
MIRT700992 PDE3A phosphodiesterase 3A 2 2
MIRT707397 DCAF4L1 DDB1 and CUL4 associated factor 4 like 1 2 2
MIRT711895 INSIG2 insulin induced gene 2 2 2
MIRT712072 XRCC5 X-ray repair cross complementing 5 2 2
MIRT716121 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT724470 SMAD2 SMAD family member 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2115 Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-mir-2115 Decitabine 451668 approved sensitive tissue (esopheageal cancer)
hsa-miR-2115-3p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-2115-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-2115-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-2115-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-2115-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2115-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-2115-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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