pre-miRNA Information
pre-miRNA hsa-mir-4446   
Genomic Coordinates chr3: 113594876 - 113594942
Description Homo sapiens miR-4446 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4446-5p
Sequence 8| AUUUCCCUGCCAUUCCCUUGGC |29
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1356015605 6 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF177   
Synonyms PIGX
Description zinc finger protein 177
Transcript NM_001172650   
Other Transcripts NM_001172651 , NM_003451   
Expression
Putative miRNA Targets on ZNF177
3'UTR of ZNF177
(miRNA target sites are highlighted)
>ZNF177|NM_001172650|3'UTR
   1 AATGACTCAGGGAAGTGTTTGTTGCCCCTCATGCCTCCTTTCTCACTTTAGAACATATATTGGAGAGAAGCCCTGTTATG
  81 GTCACCTGGAAACAGCCTTCTGGCCCAACTCTGGATGCCTGTTATACTGGGACAAACCTTATAAATGTTATAGCTATGAT
 161 TGTTTTTATCAGTGAGTATTTCATTCTTATATGTGTCACAACTGTAGATCCTATGAATATTTTAGTTATCTTTTCAGTTT
 241 AATTGCATTGTGAACAGAACACATGGTCTTCAATATGTAGATTCTGTGTGACATAGATTTGAACATAATTGCTGGACACT
 321 GACTGATGTACTGTGGCAGACAGAACTAGTTGCTGTCTCAATATCCATTCCTCCCTTCTTTCTTAAAGTAATAAAATTTA
 401 CCATTTAGTTCAAGCTGGCAATGTGGACAGTTTTCACCCAGCTTCCCTTACAGCTGTGAGCGGCCAAATATGTTCACATC
 481 CCTAGCCCATGCAAAGTAGGCAGAAGTCACTGGATACAGCTGCTAAGGAAGCTCATGGAAATGGGAATATCTCATCTGGT
 561 GTTTTTTTCTTAACTATTTGCCCTTTGTCTTGTCCCTTATTTCCTAGAAAATATATACACCAAGAGGAGGACAGAGAAAG
 641 GATACTAAATGAAACAACAGGGGAGATACAATATTATCTGGTTGCACTAATCCTGTGCTGCTTATCTCTGGATTTCATGT
 721 TACATGAGAAAAATTAACTGCCATGTGGTTTAAACCACTCTTGTGGGAAGTTCCTCTTTCAGCTGATTTCAGTCCCAACT
 801 GTTACATCTAATAAATGGTCAAGTTTTAGGAATCGTTCAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cgGUUCCCUUACCGUCCCUUUa 5'
            |||| |:| | ||| |||| 
Target 5' acCAAGAGGAGGACAGAGAAAg 3'
619 - 640 140.00 -17.50
2
miRNA  3' cgguucccUUAC--CGUCCCUUUa 5'
                  ||||   |||||||: 
Target 5' --------AATGACTCAGGGAAGt 3'
1 - 16 136.00 -13.20
3
miRNA  3' cgGUUCCCUUACCGUCCCUUUa 5'
            | | ||||   || ||||| 
Target 5' tgCTAAGGAAGCTCATGGAAAt 3'
521 - 542 128.00 -14.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30160692 8 COSMIC
COSN30481147 34 COSMIC
COSN27005893 68 COSMIC
COSN24387472 70 COSMIC
COSN30477051 73 COSMIC
COSN31581915 74 COSMIC
COSN30106552 107 COSMIC
COSN30160962 107 COSMIC
COSN20079260 128 COSMIC
COSN30121643 136 COSMIC
COSN8978098 171 COSMIC
COSN8978099 231 COSMIC
COSN20115425 324 COSMIC
COSN16836739 355 COSMIC
COSN21838133 356 COSMIC
COSN8978100 366 COSMIC
COSN25615318 462 COSMIC
COSN8978101 509 COSMIC
COSN4907546 595 COSMIC
COSN8978102 633 COSMIC
COSN30069898 641 COSMIC
COSN8978103 679 COSMIC
COSN23544738 830 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs770857467 3 dbSNP
rs1225738240 4 dbSNP
rs192540267 7 dbSNP
rs780311224 9 dbSNP
rs747227704 14 dbSNP
rs1453937844 15 dbSNP
rs768762823 21 dbSNP
rs1479713600 25 dbSNP
rs781107288 26 dbSNP
rs1269877594 28 dbSNP
rs748707560 31 dbSNP
rs770157847 32 dbSNP
rs372326101 34 dbSNP
rs1255842583 35 dbSNP
rs879729549 37 dbSNP
rs766291394 38 dbSNP
rs1171095037 43 dbSNP
rs1355723632 47 dbSNP
rs763354562 48 dbSNP
rs771411708 50 dbSNP
rs774218987 52 dbSNP
rs374337718 53 dbSNP
rs1228054705 56 dbSNP
rs1335503194 57 dbSNP
rs1319328319 59 dbSNP
rs1246827375 62 dbSNP
rs1338630490 63 dbSNP
rs559196223 64 dbSNP
rs1014550638 68 dbSNP
rs773740299 71 dbSNP
rs897081976 75 dbSNP
rs949998011 81 dbSNP
rs1382560811 83 dbSNP
rs1024267005 88 dbSNP
rs1437718434 89 dbSNP
rs1318087336 96 dbSNP
rs1456410081 97 dbSNP
rs760994166 99 dbSNP
rs771308078 105 dbSNP
rs1437948886 114 dbSNP
rs776945261 116 dbSNP
rs1002149985 122 dbSNP
rs146870497 126 dbSNP
rs1289923309 129 dbSNP
rs1246605597 140 dbSNP
rs1331517302 145 dbSNP
rs958084683 152 dbSNP
rs1292034116 156 dbSNP
rs140820327 161 dbSNP
rs138328917 168 dbSNP
rs1445403618 171 dbSNP
rs1283506872 172 dbSNP
rs989530658 173 dbSNP
rs1223844500 176 dbSNP
rs1367045987 180 dbSNP
rs1295160130 182 dbSNP
rs1011090337 187 dbSNP
rs1394773014 188 dbSNP
rs1247867314 190 dbSNP
rs149653717 191 dbSNP
rs966856424 195 dbSNP
rs1197728058 196 dbSNP
rs964283291 199 dbSNP
rs1451903578 202 dbSNP
rs751124273 207 dbSNP
rs879827675 218 dbSNP
rs1472731048 222 dbSNP
rs1029917691 226 dbSNP
rs1455028367 248 dbSNP
rs528404347 251 dbSNP
rs1157677060 253 dbSNP
rs1248660329 256 dbSNP
rs1219706313 260 dbSNP
rs1405316312 271 dbSNP
rs1273843796 273 dbSNP
rs977400401 274 dbSNP
rs1344247845 276 dbSNP
rs953726712 277 dbSNP
rs1406667385 283 dbSNP
rs1272136075 284 dbSNP
rs183502998 285 dbSNP
rs767391623 291 dbSNP
rs1368094388 293 dbSNP
rs941077906 294 dbSNP
rs145536079 295 dbSNP
rs767916448 300 dbSNP
rs752946931 301 dbSNP
rs909562851 306 dbSNP
rs1432096049 313 dbSNP
rs941055990 316 dbSNP
rs139190597 318 dbSNP
rs1350930145 319 dbSNP
rs750348866 320 dbSNP
rs1279247394 322 dbSNP
rs949883871 324 dbSNP
rs949949778 326 dbSNP
rs1348798953 329 dbSNP
rs1046049837 330 dbSNP
rs755956362 342 dbSNP
rs1230103051 344 dbSNP
rs905751522 348 dbSNP
rs1204392809 360 dbSNP
rs938014223 364 dbSNP
rs1052350113 366 dbSNP
rs780025445 372 dbSNP
rs1254552981 374 dbSNP
rs893905214 380 dbSNP
rs964546636 382 dbSNP
rs535418424 383 dbSNP
rs1011437602 387 dbSNP
rs1021022317 391 dbSNP
rs1030262692 393 dbSNP
rs1449443422 396 dbSNP
rs902724168 399 dbSNP
rs1174419763 407 dbSNP
rs998347099 412 dbSNP
rs1414057965 414 dbSNP
rs187950846 415 dbSNP
rs1161729587 421 dbSNP
rs1163359317 422 dbSNP
rs1471630874 437 dbSNP
rs1384037236 446 dbSNP
rs983040907 453 dbSNP
rs569379621 462 dbSNP
rs985162724 463 dbSNP
rs1238919914 472 dbSNP
rs539540761 479 dbSNP
rs148847638 483 dbSNP
rs1229895984 493 dbSNP
rs1326415601 493 dbSNP
rs1326528803 495 dbSNP
rs1287187163 498 dbSNP
rs779275449 516 dbSNP
rs748218130 526 dbSNP
rs924453685 529 dbSNP
rs1301678630 534 dbSNP
rs1389887255 535 dbSNP
rs573450488 537 dbSNP
rs1334213513 539 dbSNP
rs1411254876 541 dbSNP
rs918327384 544 dbSNP
rs949893441 553 dbSNP
rs1165575341 556 dbSNP
rs1415857061 562 dbSNP
rs934538376 562 dbSNP
rs1054337961 564 dbSNP
rs893799345 577 dbSNP
rs1248446527 578 dbSNP
rs1010935267 582 dbSNP
rs1040173529 592 dbSNP
rs143568443 596 dbSNP
rs927230694 605 dbSNP
rs556849997 616 dbSNP
rs1054367743 617 dbSNP
rs1311184524 619 dbSNP
rs1228279718 621 dbSNP
rs1366312755 640 dbSNP
rs192429958 642 dbSNP
rs915252655 644 dbSNP
rs1433083402 645 dbSNP
rs946737902 651 dbSNP
rs541765546 658 dbSNP
rs545670717 659 dbSNP
rs35153688 660 dbSNP
rs1439664582 662 dbSNP
rs563137094 669 dbSNP
rs1443958602 670 dbSNP
rs1042902720 672 dbSNP
rs902565712 680 dbSNP
rs1190281001 682 dbSNP
rs530672119 686 dbSNP
rs1191465453 687 dbSNP
rs868182351 693 dbSNP
rs545565708 700 dbSNP
rs998358412 701 dbSNP
rs1221398661 704 dbSNP
rs1443819812 705 dbSNP
rs1343501591 718 dbSNP
rs1226632267 720 dbSNP
rs1187868346 721 dbSNP
rs1242123389 728 dbSNP
rs1302207347 731 dbSNP
rs1017233049 737 dbSNP
rs1365518441 739 dbSNP
rs1293031722 740 dbSNP
rs1051242499 744 dbSNP
rs6512089 745 dbSNP
rs79620196 755 dbSNP
rs1170478204 759 dbSNP
rs771365342 764 dbSNP
rs962724888 771 dbSNP
rs1165959509 781 dbSNP
rs757722172 786 dbSNP
rs993813015 787 dbSNP
rs1404035399 796 dbSNP
rs1023063845 798 dbSNP
rs750730766 799 dbSNP
rs1203685032 804 dbSNP
rs1483129624 804 dbSNP
rs138090411 806 dbSNP
rs1450549899 808 dbSNP
rs1310672309 824 dbSNP
rs184823578 829 dbSNP
rs1410505310 830 dbSNP
rs780071319 831 dbSNP
rs934528520 832 dbSNP
rs981252458 833 dbSNP
rs914513683 835 dbSNP
rs142139299 836 dbSNP
rs1172962008 839 dbSNP
rs1467447077 840 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_ControlB_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cgguucccuuaccGUCCCUUUa 5'
                       |||||||| 
Target 5' -------------CAGGGAAAa 3'
1 - 9
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_ControlB_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control B
Location of target site ENST00000541595.2 | 3UTR | CAGGGAAAAAAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
223 hsa-miR-4446-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT078060 PCTP phosphatidylcholine transfer protein 2 2
MIRT099072 FOXC1 forkhead box C1 2 2
MIRT130186 TXNIP thioredoxin interacting protein 2 2
MIRT148786 NARS asparaginyl-tRNA synthetase 2 2
MIRT261965 SEPHS1 selenophosphate synthetase 1 2 2
MIRT345867 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT409087 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT451883 SOD2 superoxide dismutase 2 2 4
MIRT469236 RHOB ras homolog family member B 2 2
MIRT469435 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT483055 FOXB1 forkhead box B1 2 8
MIRT484640 TBC1D5 TBC1 domain family member 5 2 6
MIRT493106 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT497307 TMEFF2 transmembrane protein with EGF like and two follistatin like domains 2 2 2
MIRT497798 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT501273 SCARB2 scavenger receptor class B member 2 2 4
MIRT506756 KMT2D lysine methyltransferase 2D 2 2
MIRT511986 EEF2 eukaryotic translation elongation factor 2 2 4
MIRT513126 ZNF431 zinc finger protein 431 2 2
MIRT519733 ZNF394 zinc finger protein 394 2 4
MIRT520351 UBE2K ubiquitin conjugating enzyme E2 K 2 4
MIRT520542 TPPP tubulin polymerization promoting protein 2 8
MIRT530782 HDHD2 haloacid dehalogenase like hydrolase domain containing 2 2 2
MIRT531112 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT532144 GALNT8 polypeptide N-acetylgalactosaminyltransferase 8 2 2
MIRT533208 WAPAL WAPL cohesin release factor 2 2
MIRT533419 TWF1 twinfilin actin binding protein 1 2 2
MIRT534063 SRSF10 serine and arginine rich splicing factor 10 2 2
MIRT534288 SLAIN2 SLAIN motif family member 2 2 2
MIRT537796 EFNB2 ephrin B2 2 2
MIRT538017 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT538058 DMD dystrophin 2 2
MIRT538132 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT538680 CCDC80 coiled-coil domain containing 80 2 2
MIRT538788 C3orf52 chromosome 3 open reading frame 52 2 2
MIRT542762 PPAP2B phospholipid phosphatase 3 2 2
MIRT546861 RAB10 RAB10, member RAS oncogene family 2 4
MIRT547418 MED4 mediator complex subunit 4 2 4
MIRT551633 TRUB1 TruB pseudouridine synthase family member 1 2 4
MIRT552329 ZNF704 zinc finger protein 704 2 2
MIRT556124 MFSD9 major facilitator superfamily domain containing 9 2 4
MIRT559290 ATXN1 ataxin 1 2 2
MIRT562125 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT563777 HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 2 2
MIRT564430 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT566102 RBPJ recombination signal binding protein for immunoglobulin kappa J region 2 2
MIRT567126 IRF2BP2 interferon regulatory factor 2 binding protein 2 2 2
MIRT571213 RRS1 ribosome biogenesis regulator homolog 2 2
MIRT571939 LCLAT1 lysocardiolipin acyltransferase 1 2 2
MIRT571967 KIF21A kinesin family member 21A 2 2
MIRT606792 IL1RAPL1 interleukin 1 receptor accessory protein like 1 2 8
MIRT607351 TNS1 tensin 1 2 4
MIRT609416 GJB7 gap junction protein beta 7 2 4
MIRT609522 AZI2 5-azacytidine induced 2 2 4
MIRT611218 FAM174B family with sequence similarity 174 member B 2 2
MIRT611385 TRIP10 thyroid hormone receptor interactor 10 2 2
MIRT612053 KLB klotho beta 2 4
MIRT612102 CHRM3 cholinergic receptor muscarinic 3 2 2
MIRT612146 SIX1 SIX homeobox 1 2 4
MIRT612488 SIX3 SIX homeobox 3 2 4
MIRT613685 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613763 TTC38 tetratricopeptide repeat domain 38 2 2
MIRT613876 FGD1 FYVE, RhoGEF and PH domain containing 1 2 2
MIRT613965 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 4
MIRT614894 PAPOLG poly(A) polymerase gamma 2 2
MIRT614912 NFIA nuclear factor I A 2 2
MIRT615013 ERGIC2 ERGIC and golgi 2 2 2
MIRT615106 BCL7A BCL tumor suppressor 7A 2 2
MIRT615242 FAM227A family with sequence similarity 227 member A 2 4
MIRT615695 NEGR1 neuronal growth regulator 1 2 2
MIRT615956 ERBB3 erb-b2 receptor tyrosine kinase 3 2 4
MIRT615979 FSTL4 follistatin like 4 2 2
MIRT616053 PTPRE protein tyrosine phosphatase, receptor type E 2 4
MIRT616073 TBX2 T-box 2 2 4
MIRT616234 NPAS3 neuronal PAS domain protein 3 2 2
MIRT616306 CELF2 CUGBP Elav-like family member 2 2 2
MIRT616474 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT616662 ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 2 2
MIRT616887 ATP5E ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit 2 2
MIRT616902 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT617025 SYT6 synaptotagmin 6 2 2
MIRT617162 SLC16A5 solute carrier family 16 member 5 2 2
MIRT617318 DPF3 double PHD fingers 3 2 2
MIRT617792 CHRM2 cholinergic receptor muscarinic 2 2 2
MIRT618418 DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 2 2
MIRT618663 RPP40 ribonuclease P/MRP subunit p40 2 2
MIRT620212 VN1R1 vomeronasal 1 receptor 1 2 2
MIRT620413 TFDP3 transcription factor Dp family member 3 2 2
MIRT620667 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT620709 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT620956 SFT2D2 SFT2 domain containing 2 2 2
MIRT621225 LMAN1 lectin, mannose binding 1 2 2
MIRT621333 SLC11A1 solute carrier family 11 member 1 2 2
MIRT621696 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT623484 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT623777 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT624215 DCAF5 DDB1 and CUL4 associated factor 5 2 2
MIRT624675 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 2 2
MIRT627369 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT628252 EFCAB14 EF-hand calcium binding domain 14 2 2
MIRT630790 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT635631 PRR15L proline rich 15 like 2 2
MIRT636425 MARCH1 membrane associated ring-CH-type finger 1 2 2
MIRT637295 ACTN2 actinin alpha 2 2 2
MIRT637345 PIGP phosphatidylinositol glycan anchor biosynthesis class P 2 2
MIRT637842 SLC2A9 solute carrier family 2 member 9 2 2
MIRT638327 RCAN1 regulator of calcineurin 1 2 2
MIRT638375 RABL3 RAB, member of RAS oncogene family like 3 2 2
MIRT638751 EPHA4 EPH receptor A4 2 2
MIRT638965 ARHGAP6 Rho GTPase activating protein 6 2 2
MIRT639094 GLIPR1L2 GLI pathogenesis related 1 like 2 2 2
MIRT639172 CEP70 centrosomal protein 70 2 2
MIRT639254 SLC38A1 solute carrier family 38 member 1 2 4
MIRT639368 ZCCHC24 zinc finger CCHC-type containing 24 2 4
MIRT639504 CACNA1G calcium voltage-gated channel subunit alpha1 G 2 2
MIRT639644 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT640486 EXOC5 exocyst complex component 5 2 2
MIRT641424 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT641550 LIPG lipase G, endothelial type 2 2
MIRT642180 TOR1AIP1 torsin 1A interacting protein 1 2 2
MIRT642656 RGS6 regulator of G protein signaling 6 2 2
MIRT642873 SAMD1 sterile alpha motif domain containing 1 2 2
MIRT643355 TRIM10 tripartite motif containing 10 2 2
MIRT643531 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 2 2
MIRT643998 PPP1R3G protein phosphatase 1 regulatory subunit 3G 2 2
MIRT644105 PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 2 2
MIRT644421 VDR vitamin D receptor 2 2
MIRT644481 SLFN12 schlafen family member 12 2 2
MIRT644573 SPOP speckle type BTB/POZ protein 2 2
MIRT645354 SPNS1 sphingolipid transporter 1 (putative) 2 2
MIRT645383 FBLIM1 filamin binding LIM protein 1 2 2
MIRT645758 SURF6 surfeit 6 2 2
MIRT646060 VANGL2 VANGL planar cell polarity protein 2 2 2
MIRT646194 DUSP10 dual specificity phosphatase 10 2 2
MIRT647915 RGS5 regulator of G protein signaling 5 2 2
MIRT649216 AMMECR1L AMMECR1 like 2 2
MIRT649265 C17orf64 chromosome 17 open reading frame 64 2 2
MIRT649522 GTF3C3 general transcription factor IIIC subunit 3 2 2
MIRT649605 ITPKC inositol-trisphosphate 3-kinase C 2 2
MIRT650392 ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 2 2
MIRT650835 SEMA4G semaphorin 4G 2 2
MIRT651273 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT651674 VPS37A VPS37A, ESCRT-I subunit 2 2
MIRT651763 VASP vasodilator stimulated phosphoprotein 2 2
MIRT652250 TPD52L3 tumor protein D52 like 3 2 2
MIRT652277 TOM1L2 target of myb1 like 2 membrane trafficking protein 2 2
MIRT652316 TNFSF15 TNF superfamily member 15 2 2
MIRT652342 TMOD3 tropomodulin 3 2 2
MIRT652373 TMEM57 transmembrane protein 57 2 2
MIRT652438 TMEM236 transmembrane protein 236 2 2
MIRT652723 TGFB2 transforming growth factor beta 2 2 2
MIRT652752 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT653310 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT653327 SMIM18 small integral membrane protein 18 2 2
MIRT653406 SLC7A2 solute carrier family 7 member 2 2 2
MIRT653512 SLC41A1 solute carrier family 41 member 1 2 2
MIRT653912 SERPINC1 serpin family C member 1 2 2
MIRT654111 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT654153 RORB RAR related orphan receptor B 2 2
MIRT654548 RAB14 RAB14, member RAS oncogene family 2 2
MIRT654920 POLR3D RNA polymerase III subunit D 2 2
MIRT655169 PHF19 PHD finger protein 19 2 2
MIRT655412 PAN2 PAN2 poly(A) specific ribonuclease subunit 2 2
MIRT655784 NOVA2 NOVA alternative splicing regulator 2 2 2
MIRT655836 NGDN neuroguidin 2 2
MIRT656079 MTA3 metastasis associated 1 family member 3 2 2
MIRT656404 MCTP1 multiple C2 and transmembrane domain containing 1 2 2
MIRT656720 LMLN leishmanolysin like peptidase 2 2
MIRT656774 LARP1 La ribonucleoprotein domain family member 1 2 2
MIRT656922 KIAA1462 junctional cadherin 5 associated 2 2
MIRT657004 KCNMB4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 2 2
MIRT657477 HCAR2 hydroxycarboxylic acid receptor 2 2 2
MIRT657539 GSTO2 glutathione S-transferase omega 2 2 2
MIRT657911 GCC1 GRIP and coiled-coil domain containing 1 2 2
MIRT658478 EXOC8 exocyst complex component 8 2 2
MIRT658612 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 2
MIRT658823 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT658965 DNAJB5 DnaJ heat shock protein family (Hsp40) member B5 2 4
MIRT659706 CCDC93 coiled-coil domain containing 93 2 2
MIRT660034 C15orf61 chromosome 15 open reading frame 61 2 2
MIRT660108 BTBD3 BTB domain containing 3 2 2
MIRT660697 AMOTL2 angiomotin like 2 2 2
MIRT660763 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT660884 ADCYAP1R1 ADCYAP receptor type I 2 2
MIRT660956 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT661217 SCIMP SLP adaptor and CSK interacting membrane protein 2 2
MIRT661596 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT661624 UGT2B28 UDP glucuronosyltransferase family 2 member B28 2 2
MIRT662430 EID2 EP300 interacting inhibitor of differentiation 2 2 2
MIRT664816 NOX5 NADPH oxidase 5 2 2
MIRT665548 UCHL5 ubiquitin C-terminal hydrolase L5 2 2
MIRT665815 TMEM161B transmembrane protein 161B 2 2
MIRT666668 RBM23 RNA binding motif protein 23 2 2
MIRT667995 HCFC2 host cell factor C2 2 2
MIRT668064 GPR180 G protein-coupled receptor 180 2 2
MIRT669056 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 2
MIRT669637 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT699368 SLC30A6 solute carrier family 30 member 6 2 2
MIRT699882 RUNX1 runt related transcription factor 1 2 2
MIRT703834 ETV3 ETS variant 3 2 2
MIRT708528 ZNF177 zinc finger protein 177 2 2
MIRT709696 DMWD DM1 locus, WD repeat containing 2 2
MIRT710381 PARD6G par-6 family cell polarity regulator gamma 2 2
MIRT710639 GLUL glutamate-ammonia ligase 2 2
MIRT711584 SETD1A SET domain containing 1A 2 2
MIRT713208 FAM13A family with sequence similarity 13 member A 2 2
MIRT714129 IL20RB interleukin 20 receptor subunit beta 2 2
MIRT714204 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT714733 CCNO cyclin O 2 2
MIRT714761 ZNF462 zinc finger protein 462 2 2
MIRT715624 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT715755 SKA2 spindle and kinetochore associated complex subunit 2 2 2
MIRT716075 RNF150 ring finger protein 150 2 2
MIRT716179 MTRNR2L1 MT-RNR2-like 1 2 2
MIRT717450 RWDD2A RWD domain containing 2A 2 2
MIRT717866 CACNA2D1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 2 2
MIRT720964 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT721564 SLC5A12 solute carrier family 5 member 12 2 2
MIRT722348 BAG2 BCL2 associated athanogene 2 2 2
MIRT723235 BTLA B and T lymphocyte associated 2 2
MIRT724018 LMBRD2 LMBR1 domain containing 2 2 2
MIRT724507 KLHL5 kelch like family member 5 2 2
MIRT725478 GPR26 G protein-coupled receptor 26 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4446 Aed Therapy sensitive High Epilepsy tissue
hsa-mir-4446 Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-4446 Androstenedione+Letrozole sensitive cell line (MCF-7)
hsa-mir-4446 Tamoxifen 2733525 NSC180973 approved resistant cell line (MCF7)
hsa-mir-4446 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-mir-4446 Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)
hsa-miR-4446-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-4446-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4446-5p Neoadjuvant chemotherapy resistant tissue (breast cancer)
hsa-miR-4446-5p Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)

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