miRTarBase - #MIRT709004


—
pre-miRNA Information
pre-miRNA hsa-mir-6751   
Genomic Coordinates chr11: 65129916 - 65129978
Description Homo sapiens miR-6751 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6751-3p
Sequence 43| ACUGAGCCUCUCUCUCUCCAG |63
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM6795708 8 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs749989972 2 dbSNP
rs1266150108 3 dbSNP
rs1488089412 6 dbSNP
rs1259846893 8 dbSNP
rs3802937 10 dbSNP
rs371083440 12 dbSNP
rs1264909843 13 dbSNP
rs751042478 14 dbSNP
rs757551063 19 dbSNP
Putative Targets

Gene Information
Gene Symbol CD109   
Synonyms CPAMD7, p180, r150
Description CD109 molecule
Transcript NM_001159587   
Other Transcripts NM_001159588 , NM_133493   
Expression
Putative miRNA Targets on CD109
3'UTR of CD109
(miRNA target sites are highlighted)		 
>CD109|NM_001159587|3'UTR
   1 TTTATTTTTAAAGGACTCTGTGTAACACTAACATTTCCAGTAGTCACATGTGATTGTTTTGTTTTCGTAGAAGAATACTG
  81 CTTCTATTTTGAAAAAAGAGTTTTTTTTCTTTCTATGGGGTTGCAGGGATGGTGTACAACAGGTCCTAGCATGTATAGCT
 161 GCATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTGTGTCTATATTTTCCCCTCTCAAAAT
 241 CTTTTAGAATTTTTTTGGAGGTGTTTGTTTTCTCCAGAATAAAGGTATTACTTTAGAATAGGTATTCTCCTCATTTTGTG
 321 AAAGAAATGAACCTAGATTCTTAAGCATTATTACACATCCATGTTTGCTTAAAGATGGATTTCCCTGGGAATGGGAGAAA
 401 ACAGCCAGCAGGAGGAGCTTCATCTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGCCCACCCCACCCCAACCCACCCC
 481 ATGCCCAGTGGTCTCAGTAGATACTTCTTAACTGGAAATTCTTTCTTTTCAGAATCTAGGTGGTGAATTTTTTTTAAGTG
 561 GCACGGTCTTTTTCTGCTTGAAATCTGATCACACCCCCCAGCCATTGCCCTCCCTCTCTTTTTCCTCTGTAGAGAAATGT
 641 GAGGGGCAGTACATTTACTGTGCTTTTCACACCATCTCAGAGGTTGAGGAGCATACTGAAAATTGCCCTGGGGGGTGCTG
 721 GGTGTGCTGTCTCCTTCCCACATCCTCAGCCCCACACCAGCTCTATTTCAGGGGTGAGAGTCAGAGAGCACTGCAATATG
 801 TGCTTCATGGGATTTCGATTCGAAGATCCTAGACCAGGGAGACACTGTGAGCCAGGGATACAACAAAATACTAGGTAAGT
 881 CACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGAATCAGAGCATCTTGACATGACTGCTGAC
 961 CTAAAGATCCCTGGCATTGGCCAGGGATCCTGTGGAACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTC
1041 TAGTGACATCTGATGCTTGCTGTGAACTTTTAAGATCCCCGAATCCTGAGCACCTCAATCTTTAATTGCCCTGTATTCCG
1121 AAGGGTAATATAATTTATCTGGATGGAAATTTTAAAGATGAATCCCCCTTTTTTCTTTTCTTCTCTCTTTTCTTTCCTTC
1201 TCCCTTTCTTCTTTGCCTTCTAAATATACTGAAATGATTTAGATATGTGTCAACAATTAATGATCTTTTATTCAATCTAA
1281 GAAATGGTTTAGTTTTTCTCTTTAGCTCTATGGCATTTCACTCAAGTGGACAGGGGAAAAAGTAATTGCCATGGGCTCCA
1361 AAGAATTTGCTTTATGTTTTTAGCTATTTAAAAATAAATCCATCAAAAATAAAGTATGCAAATGTATCTTTTAAAGTTAA
1441 TTTTTAAAAATGCTCTTATTTTAGTGAATTTTCAGAAATTATAGTGGAATGGATGCTCATATATTGCTTATGGATATTTT
1521 GGATACCAAAGTAGGAATAACTGACATTCAGTATTTTAAAGCTGGCAAACCTGTACATAGAAAATAGATCCCCAGACAGT
1601 GGTCTATGAAGAGGGCAGTTAAGTATCAAATACTTAATTTTCTTGCCTTTTTTTCTTAAGTGGGGAAAAGTTTCTAGATC
1681 TCTTACACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTTGTAAACGTGTTTTTGCCCTTT
1761 ACTCTCTGGGAGTTCTTTAAAGGTGAAATCATCTTACAAAGAAATTGGGGGAGGGTCTTGGCAAAGGACTTTCCCCTCCT
1841 CTTTCCTGGCCTGGGAACCTTATACTGACAATCAATACTTTATATTTTAAAGTATATAATTTATAGTTAACTTCTAGTGT
1921 AATATATTAGGAAACACTAGAATGGAAAGGCCATTGGAAGACAGGTTGTATCTTTTTTAGACCATATTTCCTTGTTTAAA
2001 AACTATCATTTGAATACTTTTTTGGTGAAGAACTCCATGTTTTCAAGTTAAAGGTCACCTCGTAGGCCAGGCGCAGTGGC
2081 TCATGCCTGTAATCCCAGCACTCTGGGAGGCTGAGGCGGGTGAATCACAAGGTTAGGAGTTTGAGACCAGCCTGGCCAAT
2161 ATGGTGAAACCCCGTCCCTACTAAAAATACAAAATTTAGCCAGGCGTGGTGGCATGCACCTGTAGTCCCACCTACTCGGG
2241 AGGCTGAGGCAGGAGAATCACTTGAACCTGAGAGACAGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTG
2321 GGGGACAGAGTGAGATTCTGTCTCAAAAAACAAAAAACAAAAAAGTCACCTTGTAACTCATCTCTTTTTATTGTAAGTTT
2401 ATTAAAAATGAAGAGGACAACAATGAGAAGGAACATAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAG
2481 ATGTCCCGGCCACTTCTTCCTTCATACTTCCCTTAGAGAACTTGCTCTGCTACAAGCAGTGGGCTTGGACTAAAAGTGAT
2561 TAAAATACCACAGGCATAAGGAGAAAAGGAGTATATGTAGTAGTAATAATTACTAGTATAAATTATTTTCTTCACATGCT
2641 ATGAGTAATAATATTAAAAAACTCATTTTACCATTAAGATTCCTTATGCTGAAGCTCTTCCATTTAGAATACTGTCAATG
2721 TCATTTACTGGTATGAACTAAAGTCCCCCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTC
2801 TCTTTCTGACTGGCCGATGCTTCCAGAGACTGAATGTTGGGAAAACCTAGTAGCCAAACAATTCTAGGACAGAATAACAT
2881 TTTTATATTTGGTTCCACCATCTTATTACATTTAGTTATAGTTTTAAAAAAGAAATTCAAGCCCATTAAAATATGTCTGG
2961 TCAATGAAATGCTTCCTTTTATTGTGTTGTGCTATTGTACTTTGTTTTTCAAAACATTGTAAAAATAGTATCTTTGGTTT
3041 AGTATTTTGGATTATATATTATAATCTGAGGAGTGTTTTGCTTATGTAGAATCCAGATATATTTCTGTTACCTAGGAGAT
3121 GTTACTTACATATGTAATACTGTATCCTGCACGTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATT
3201 CTTTTGAGCCTAGGTATAATTTTTTTTTTTTTTTTAGAAAAAGACATATTTAGCTTTAATTTCTATTTATGCTAAACATA
3281 TTTATAAGTAGTCTGTCAATATAATACCAACTATTTTTATTTTTACATAATTCAATTATTTCATTTGACATGTCTGGCAG
3361 ACTCAAGACATTAAGTAAAAAATTGGAACTATGATTTTTCTTTGTCATTTTTTAAAAAAGAATTATTTTATTAACCTGCT
3441 GGCATATAATCTGGAGTTCTTTTCACAACCTTACTTTTTCTGATTTGCTTTATTGAATGATTGAATACTCATTTCTTTCT
3521 AAAAATATGTTGTAAATTCTCCCTTGGCAAGATTTCTCCCTATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACC
3601 ATGGGGCAAGGTGCCATGATGTATTCTTGGGTGCATTGGTTTTTTGCGCATTGTAAATTTAAGACACTTATAGTAAGTGG
3681 ACTCATTCATAGATGAGTTTCAGAACCTTTTACGTTCTCGGTAGAGGCTTCTGTCGGACAGGCAGAAGAGTGTATTCCTC
3761 ACTTTTTTTTTTGTCTTCAAATTCCAGTAAGGCATAGCACTTTTAAGAAATTAGAATTTTTCTATCATCTATGCAAATGA
3841 TATTTATGTTAATATTAAATATCTTATGTTACACTGGGAGTAATTTGAGGTGCAATTATTTTTATTACTACTTTGAATAG
3921 AGGACCATTATCCTTCTTTCTTCAGAAAACTAAGAAGTAAGTGTAACTTTTAAAGTAAGTATATATCAGTGAGAGTAGGC
4001 TTGTTTTACAACTATTTCTAGCCAGTGAGTTGTGTTTTCATGTCTCATCAAAAGACAATACCACATTGCATCATTTTACA
4081 AAATATGTTGTCATTTTCATTTCAGTTGTAACATAGGAAAATAGATATTTCCTAGATGATTTCTGAGTTTCTTACTGCAA
4161 AGAACAGTTATAAATTGGTATACATGTGTCTCTGTAATAGGGATAATATTGATATATCTGTTGCTACATATTTAAGAATC
4241 ATTCTATCTTATGTTGTCTTGAGGCCAAGATTTACCACGTTTGCCCAGTGTATTGAATTGGTGGTAGAAGGTAGTTCCAT
4321 GTTCCATTTGTAGATCTTTAAGATTTTATCTTTGATAACTTTAATAGAATGTGGCTCAGTTCTGGTCCTTCAAGCCTGTA
4401 TGGTTTGGATTTTCAGTAGGGGACAGTTGATGTGGAGTCAATCTCTTTGGTACACAGGAAGCTTTATAAAATTTCATTCA
4481 CGAATCTCTTATTTTGGGAAGCTGTTTTGCATATGAGAAGAACACTGTTGAAATAAGGAACTAAAGCTTTATATATTGAT
4561 CAAGGTGATTCTGAAAGTTTTAATTTTTAATGTTGTAATGTTATGTTATTGTTAATTGTACTTTATTATGTATTCAATAG
4641 AAAATCATGATTTATTAATAAAAGCTTAAATTCTCATCTATTTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaccUCUCUCUCUCCGAGUCa 5'
              | |||  | ||||||| 
Target 5' tttaATAGAATGTGGCTCAGt 3'
 4360 - 4380 153.00 -15.50
2 
miRNA  3' gacCUCUCUCUCUCCGA-GUCa 5'
             |||||| |||||:| ||| 
Target 5' cctGAGAGACAGAGGTTGCAGt 3'
 2267 - 2288 134.00 -23.20
3 
miRNA  3' gaccUCUCUCUCUCCGAGUca 5'
              ||: : || ||||||  
Target 5' ggccAGGCGCAGTGGCTCAtg 3'
 2065 - 2085 133.00 -12.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM6571911 1 COSMIC
COSN30175542 19 COSMIC
COSN26969787 24 COSMIC
COSN30190633 29 COSMIC
COSN30128263 38 COSMIC
COSN7897213 68 COSMIC
COSN21867205 121 COSMIC
COSN19654453 130 COSMIC
COSN31525606 167 COSMIC
COSN17946889 467 COSMIC
COSN7897214 470 COSMIC
COSN25751926 594 COSMIC
COSN4928998 628 COSMIC
COSN15662263 677 COSMIC
COSN22803012 1052 COSMIC
COSN9806616 1756 COSMIC
COSN14682885 1807 COSMIC
COSN24451962 1827 COSMIC
COSN17430286 2122 COSMIC
COSN2176654 2189 COSMIC
COSN25205709 2295 COSMIC
COSN25023087 2362 COSMIC
COSN14930890 2646 COSMIC
COSN22754173 2900 COSMIC
COSN25545373 2927 COSMIC
COSN9806617 3143 COSMIC
COSN20103012 3236 COSMIC
COSN20103015 3236 COSMIC
COSN32056592 3236 COSMIC
COSN2176655 3352 COSMIC
COSN24150047 3568 COSMIC
COSN27202121 3773 COSMIC
COSN9806618 3789 COSMIC
COSN20075603 4189 COSMIC
COSN30028697 4197 COSMIC
COSN30560893 4293 COSMIC
COSN30756703 4315 COSMIC
COSN7897215 4326 COSMIC
COSN30540836 4334 COSMIC
COSN23597637 4473 COSMIC
COSN30712568 4482 COSMIC
COSN20056921 4483 COSMIC
COSN26574391 4550 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs565322627 8 dbSNP
rs748994812 18 dbSNP
rs765499911 20 dbSNP
rs1013930902 22 dbSNP
rs752958192 23 dbSNP
rs370766671 26 dbSNP
rs1466393248 28 dbSNP
rs774097620 33 dbSNP
rs1291340185 35 dbSNP
rs1399730576 37 dbSNP
rs1229551788 39 dbSNP
rs1045009201 40 dbSNP
rs1449298153 41 dbSNP
rs906106501 46 dbSNP
rs1332294578 48 dbSNP
rs963996269 56 dbSNP
rs1352765527 58 dbSNP
rs995520945 59 dbSNP
rs1309134387 65 dbSNP
rs1027810345 67 dbSNP
rs542331042 68 dbSNP
rs1004901404 69 dbSNP
rs1406061479 79 dbSNP
rs951308296 80 dbSNP
rs1394175352 81 dbSNP
rs552208613 87 dbSNP
rs1317101939 91 dbSNP
rs982868022 97 dbSNP
rs1253794200 101 dbSNP
rs754329286 101 dbSNP
rs144204533 102 dbSNP
rs965984603 104 dbSNP
rs1223076703 113 dbSNP
rs980776708 116 dbSNP
rs1272033775 120 dbSNP
rs1226229636 122 dbSNP
rs1308946151 125 dbSNP
rs974710082 139 dbSNP
rs1289431229 146 dbSNP
rs1029449491 147 dbSNP
rs750458944 152 dbSNP
rs1366065666 156 dbSNP
rs1295827753 158 dbSNP
rs979114171 160 dbSNP
rs1388053929 161 dbSNP
rs550750684 178 dbSNP
rs1459075178 182 dbSNP
rs1412994089 195 dbSNP
rs936888957 196 dbSNP
rs772559623 209 dbSNP
rs146628152 210 dbSNP
rs1202280653 213 dbSNP
rs917010344 214 dbSNP
rs892614080 223 dbSNP
rs1488503586 224 dbSNP
rs1246947967 225 dbSNP
rs1206420860 227 dbSNP
rs945561572 230 dbSNP
rs113956945 234 dbSNP
rs1044048373 242 dbSNP
rs1310864170 250 dbSNP
rs1188407442 277 dbSNP
rs1220382792 283 dbSNP
rs6902777 284 dbSNP
rs1364532612 288 dbSNP
rs905555171 293 dbSNP
rs548173934 301 dbSNP
rs1049797650 319 dbSNP
rs1430570401 336 dbSNP
rs886571443 342 dbSNP
rs1005017550 344 dbSNP
rs1019107162 347 dbSNP
rs1302506995 351 dbSNP
rs1171432880 353 dbSNP
rs371505548 384 dbSNP
rs1017915934 387 dbSNP
rs1454699140 390 dbSNP
rs1389493793 425 dbSNP
rs899508490 427 dbSNP
rs567248909 431 dbSNP
rs777742415 438 dbSNP
rs1248238745 440 dbSNP
rs141442682 456 dbSNP
rs1042645168 458 dbSNP
rs951232913 460 dbSNP
rs1338544223 461 dbSNP
rs1313336343 462 dbSNP
rs534668877 462 dbSNP
rs1211282364 463 dbSNP
rs1258198694 463 dbSNP
rs1341993751 465 dbSNP
rs1406820840 466 dbSNP
rs1339729002 467 dbSNP
rs1434066073 471 dbSNP
rs1295187347 472 dbSNP
rs1363601864 475 dbSNP
rs1214758995 476 dbSNP
rs1300195023 477 dbSNP
rs1312240912 478 dbSNP
rs1309877958 481 dbSNP
rs1205024026 482 dbSNP
rs1265540265 483 dbSNP
rs1462200890 484 dbSNP
rs1208473918 487 dbSNP
rs1376679440 487 dbSNP
rs1240680869 488 dbSNP
rs1209192047 489 dbSNP
rs1487066925 489 dbSNP
rs1304309664 490 dbSNP
rs983055127 494 dbSNP
rs554385362 496 dbSNP
rs1424728131 501 dbSNP
rs1479493621 505 dbSNP
rs1163623543 508 dbSNP
rs970746276 510 dbSNP
rs1189046373 524 dbSNP
rs1482947251 525 dbSNP
rs778526684 538 dbSNP
rs980828552 540 dbSNP
rs3751646 541 dbSNP
rs1242711317 548 dbSNP
rs1318498964 548 dbSNP
rs968464550 556 dbSNP
rs978676174 561 dbSNP
rs145801687 565 dbSNP
rs538732902 566 dbSNP
rs1349693124 579 dbSNP
rs955822781 593 dbSNP
rs539678536 594 dbSNP
rs556743299 595 dbSNP
rs1397142661 600 dbSNP
rs988634519 601 dbSNP
rs571012669 605 dbSNP
rs1455962725 608 dbSNP
rs752571938 608 dbSNP
rs1369790523 613 dbSNP
rs1165255926 614 dbSNP
rs747034796 619 dbSNP
rs771109249 623 dbSNP
rs949769251 626 dbSNP
rs3751645 627 dbSNP
rs1324857653 631 dbSNP
rs1267273990 632 dbSNP
rs148993215 634 dbSNP
rs1208093908 637 dbSNP
rs890631536 638 dbSNP
rs1266232243 646 dbSNP
rs1228090622 652 dbSNP
rs1282786599 653 dbSNP
rs943735322 665 dbSNP
rs373019103 668 dbSNP
rs1217034348 669 dbSNP
rs926955748 687 dbSNP
rs1322841057 710 dbSNP
rs573615323 715 dbSNP
rs777705078 716 dbSNP
rs1386008154 718 dbSNP
rs143072907 722 dbSNP
rs1026895458 728 dbSNP
rs3012518 730 dbSNP
rs1004134640 733 dbSNP
rs1024728507 735 dbSNP
rs1208206238 744 dbSNP
rs1463658983 745 dbSNP
rs1410079420 755 dbSNP
rs1206624773 762 dbSNP
rs6907830 766 dbSNP
rs1274144682 771 dbSNP
rs1231063919 776 dbSNP
rs1040504166 789 dbSNP
rs551144669 807 dbSNP
rs1303425350 812 dbSNP
rs562687994 817 dbSNP
rs1322158347 819 dbSNP
rs1262923002 820 dbSNP
rs186111915 822 dbSNP
rs1349272339 823 dbSNP
rs1050958434 840 dbSNP
rs1278288851 859 dbSNP
rs1353540693 865 dbSNP
rs1396221036 865 dbSNP
rs116754931 867 dbSNP
rs745483636 874 dbSNP
rs1250111284 884 dbSNP
rs769509072 892 dbSNP
rs1447358713 893 dbSNP
rs1277724593 903 dbSNP
rs1198527493 907 dbSNP
rs1031042015 909 dbSNP
rs955937531 928 dbSNP
rs1226961704 935 dbSNP
rs1010186010 936 dbSNP
rs1292802168 950 dbSNP
rs1299360623 950 dbSNP
rs1024116150 952 dbSNP
rs987750112 957 dbSNP
rs1332535477 958 dbSNP
rs774539971 959 dbSNP
rs979839222 962 dbSNP
rs927044728 970 dbSNP
rs951865565 981 dbSNP
rs1427871493 983 dbSNP
rs566492256 1004 dbSNP
rs907573075 1006 dbSNP
rs921048187 1011 dbSNP
rs1235949686 1014 dbSNP
rs1185087522 1016 dbSNP
rs930990486 1018 dbSNP
rs1258107817 1023 dbSNP
rs762241699 1030 dbSNP
rs868336036 1035 dbSNP
rs1339433987 1058 dbSNP
rs1274432719 1063 dbSNP
rs1214654782 1070 dbSNP
rs1355166145 1079 dbSNP
rs1282091322 1081 dbSNP
rs1416987543 1089 dbSNP
rs41266759 1091 dbSNP
rs923416190 1104 dbSNP
rs1372960037 1109 dbSNP
rs546528315 1112 dbSNP
rs932143282 1120 dbSNP
rs1050498463 1121 dbSNP
rs1407697793 1131 dbSNP
rs1046314727 1133 dbSNP
rs1418383870 1144 dbSNP
rs1181208212 1145 dbSNP
rs906354870 1146 dbSNP
rs903927721 1166 dbSNP
rs1234566182 1169 dbSNP
rs1443507692 1171 dbSNP
rs7383150 1174 dbSNP
rs1314997959 1176 dbSNP
rs1204549337 1179 dbSNP
rs1380967439 1181 dbSNP
rs1248635704 1184 dbSNP
rs1315993369 1186 dbSNP
rs1341793378 1188 dbSNP
rs1002023783 1192 dbSNP
rs1194129294 1216 dbSNP
rs1335891866 1227 dbSNP
rs571431355 1228 dbSNP
rs1226947181 1231 dbSNP
rs1376115457 1238 dbSNP
rs189143471 1239 dbSNP
rs1438497246 1248 dbSNP
rs1435815223 1250 dbSNP
rs1209264082 1251 dbSNP
rs1328164713 1255 dbSNP
rs182601840 1260 dbSNP
rs1000996165 1264 dbSNP
rs769534500 1271 dbSNP
rs1052416130 1275 dbSNP
rs892483930 1294 dbSNP
rs958404821 1300 dbSNP
rs557117343 1301 dbSNP
rs1446223344 1311 dbSNP
rs1410041771 1322 dbSNP
rs1184033659 1324 dbSNP
rs1010995564 1326 dbSNP
rs1215032298 1331 dbSNP
rs1389141533 1336 dbSNP
rs1021341985 1337 dbSNP
rs966748628 1338 dbSNP
rs1010135034 1340 dbSNP
rs575441572 1342 dbSNP
rs1319156037 1345 dbSNP
rs971222113 1347 dbSNP
rs867703605 1358 dbSNP
rs1169313581 1376 dbSNP
rs1396526956 1391 dbSNP
rs1001768975 1400 dbSNP
rs1034228147 1401 dbSNP
rs1413426486 1402 dbSNP
rs912176839 1403 dbSNP
rs772399678 1411 dbSNP
rs536337988 1418 dbSNP
rs951871411 1419 dbSNP
rs775296415 1420 dbSNP
rs1364666117 1423 dbSNP
rs201522240 1423 dbSNP
rs974946299 1425 dbSNP
rs1326043504 1426 dbSNP
rs554620548 1438 dbSNP
rs920763241 1440 dbSNP
rs1159731272 1441 dbSNP
rs1413778966 1442 dbSNP
rs1422975112 1446 dbSNP
rs572848503 1447 dbSNP
rs984536999 1451 dbSNP
rs1247008426 1456 dbSNP
rs1186324445 1478 dbSNP
rs1487050681 1479 dbSNP
rs773853644 1485 dbSNP
rs1272169426 1490 dbSNP
rs1340074976 1499 dbSNP
rs1209865175 1501 dbSNP
rs1310919018 1502 dbSNP
rs1283114853 1517 dbSNP
rs1218788924 1524 dbSNP
rs907517158 1530 dbSNP
rs1261164314 1531 dbSNP
rs961703803 1543 dbSNP
rs1295677807 1554 dbSNP
rs142670724 1565 dbSNP
rs1204022790 1572 dbSNP
rs923525956 1573 dbSNP
rs1445086670 1574 dbSNP
rs932284586 1576 dbSNP
rs559027350 1590 dbSNP
rs1389088247 1591 dbSNP
rs1167862544 1593 dbSNP
rs925498561 1595 dbSNP
rs1262034637 1597 dbSNP
rs1181590691 1600 dbSNP
rs1001991268 1601 dbSNP
rs936723210 1612 dbSNP
rs1373297751 1622 dbSNP
rs1054847077 1628 dbSNP
rs1212316303 1632 dbSNP
rs1052540648 1646 dbSNP
rs1229705848 1648 dbSNP
rs1308257760 1659 dbSNP
rs146936191 1662 dbSNP
rs1173713958 1668 dbSNP
rs1312303751 1677 dbSNP
rs893649464 1680 dbSNP
rs1353371631 1682 dbSNP
rs762804114 1686 dbSNP
rs544506659 1694 dbSNP
rs1427789648 1707 dbSNP
rs867746458 1720 dbSNP
rs949373801 1722 dbSNP
rs1373269205 1723 dbSNP
rs1021056689 1727 dbSNP
rs866172000 1731 dbSNP
rs902494219 1733 dbSNP
rs1008935286 1738 dbSNP
rs1189118128 1747 dbSNP
rs1046468713 1756 dbSNP
rs761307123 1757 dbSNP
rs74644255 1758 dbSNP
rs9447040 1765 dbSNP
rs887627964 1792 dbSNP
rs1005900556 1794 dbSNP
rs72959386 1807 dbSNP
rs1219726716 1809 dbSNP
rs1332393609 1811 dbSNP
rs1294835316 1817 dbSNP
rs952263610 1823 dbSNP
rs961653676 1834 dbSNP
rs1304848288 1836 dbSNP
rs1404386656 1838 dbSNP
rs1281495583 1840 dbSNP
rs1292573517 1848 dbSNP
rs1325791185 1850 dbSNP
rs1459497114 1851 dbSNP
rs1396230512 1854 dbSNP
rs759641230 1860 dbSNP
rs1472479799 1864 dbSNP
rs1223987803 1869 dbSNP
rs1184646308 1870 dbSNP
rs908313094 1872 dbSNP
rs1266834858 1874 dbSNP
rs1030036045 1875 dbSNP
rs953738625 1882 dbSNP
rs1469935985 1885 dbSNP
rs1274067527 1897 dbSNP
rs1348198141 1923 dbSNP
rs986427252 1931 dbSNP
rs925419850 1933 dbSNP
rs561742927 1938 dbSNP
rs1328271119 1944 dbSNP
rs1258889293 1950 dbSNP
rs936827074 1951 dbSNP
rs12661020 1964 dbSNP
rs527649108 1969 dbSNP
rs1299915166 1971 dbSNP
rs1270364721 1972 dbSNP
rs1480492227 1977 dbSNP
rs552536757 1979 dbSNP
rs913981021 1983 dbSNP
rs1326225928 1985 dbSNP
rs949489693 1992 dbSNP
rs1046812842 1995 dbSNP
rs1054980444 1998 dbSNP
rs893606726 2003 dbSNP
rs1454708679 2004 dbSNP
rs946595030 2008 dbSNP
rs571499462 2009 dbSNP
rs1363791749 2013 dbSNP
rs905223743 2025 dbSNP
rs1253832869 2026 dbSNP
rs752379074 2032 dbSNP
rs1188243677 2034 dbSNP
rs937229913 2036 dbSNP
rs1160703015 2040 dbSNP
rs1446205735 2040 dbSNP
rs1259336960 2044 dbSNP
rs1055731353 2052 dbSNP
rs1385906047 2054 dbSNP
rs137944942 2062 dbSNP
rs1006019538 2063 dbSNP
rs1347406237 2073 dbSNP
rs1349466827 2074 dbSNP
rs1405637350 2075 dbSNP
rs532416457 2076 dbSNP
rs897577314 2079 dbSNP
rs1433979567 2081 dbSNP
rs996406106 2083 dbSNP
rs1324334693 2084 dbSNP
rs1333970830 2095 dbSNP
rs1383155923 2099 dbSNP
rs1402095031 2100 dbSNP
rs1027927750 2110 dbSNP
rs1449016256 2118 dbSNP
rs1436656096 2119 dbSNP
rs999009115 2122 dbSNP
rs997245063 2131 dbSNP
rs1261134655 2132 dbSNP
rs1358504861 2135 dbSNP
rs866418623 2137 dbSNP
rs1219737719 2141 dbSNP
rs1030398485 2148 dbSNP
rs1490368748 2150 dbSNP
rs1375036488 2155 dbSNP
rs1195006166 2157 dbSNP
rs547501874 2159 dbSNP
rs187115185 2161 dbSNP
rs1256677776 2165 dbSNP
rs1166805838 2167 dbSNP
rs1208718157 2168 dbSNP
rs1486357480 2171 dbSNP
rs986748248 2172 dbSNP
rs1213481757 2174 dbSNP
rs1404889688 2175 dbSNP
rs1417896389 2176 dbSNP
rs190642479 2177 dbSNP
rs1364687826 2178 dbSNP
rs1340317797 2196 dbSNP
rs1424433251 2200 dbSNP
rs1417105048 2204 dbSNP
rs1376602073 2205 dbSNP
rs1161829918 2206 dbSNP
rs569040778 2207 dbSNP
rs958308847 2210 dbSNP
rs988304008 2213 dbSNP
rs1421884284 2215 dbSNP
rs1425368131 2219 dbSNP
rs914094194 2227 dbSNP
rs1416964839 2236 dbSNP
rs1258171965 2238 dbSNP
rs949433097 2238 dbSNP
rs1297734843 2239 dbSNP
rs1435613475 2241 dbSNP
rs1274672574 2245 dbSNP
rs182943315 2249 dbSNP
rs1196075825 2254 dbSNP
rs983674078 2259 dbSNP
rs141777056 2260 dbSNP
rs961074615 2270 dbSNP
rs566562954 2274 dbSNP
rs1440070136 2277 dbSNP
rs938031271 2278 dbSNP
rs1356418687 2281 dbSNP
rs1329771228 2282 dbSNP
rs533598913 2286 dbSNP
rs1056085044 2294 dbSNP
rs761363024 2295 dbSNP
rs572899262 2296 dbSNP
rs1162479364 2297 dbSNP
rs1381699625 2300 dbSNP
rs1418455014 2301 dbSNP
rs1243507502 2302 dbSNP
rs1316701245 2303 dbSNP
rs941993123 2311 dbSNP
rs1270911097 2318 dbSNP
rs937698411 2319 dbSNP
rs1036136579 2327 dbSNP
rs1203169465 2331 dbSNP
rs915191514 2334 dbSNP
rs758202788 2340 dbSNP
rs766985607 2342 dbSNP
rs1042184401 2344 dbSNP
rs1376177853 2344 dbSNP
rs1440301890 2345 dbSNP
rs902351756 2350 dbSNP
rs750145482 2352 dbSNP
rs565527218 2354 dbSNP
rs150602004 2358 dbSNP
rs755754736 2359 dbSNP
rs1350312999 2386 dbSNP
rs577501266 2388 dbSNP
rs185757274 2390 dbSNP
rs996205218 2395 dbSNP
rs1158594707 2398 dbSNP
rs1453323713 2400 dbSNP
rs1049767349 2413 dbSNP
rs1387293114 2415 dbSNP
rs1195180465 2419 dbSNP
rs1469174443 2423 dbSNP
rs888077081 2435 dbSNP
rs1214092886 2437 dbSNP
rs1445517253 2438 dbSNP
rs1170048647 2441 dbSNP
rs1285599034 2442 dbSNP
rs1005551018 2443 dbSNP
rs1345867581 2450 dbSNP
rs1305883574 2451 dbSNP
rs1051525413 2455 dbSNP
rs1361536150 2456 dbSNP
rs1298613040 2460 dbSNP
rs75719906 2461 dbSNP
rs1346873842 2466 dbSNP
rs1450155684 2479 dbSNP
rs751465369 2480 dbSNP
rs551163810 2488 dbSNP
rs1007217134 2489 dbSNP
rs1213571591 2490 dbSNP
rs1293009090 2512 dbSNP
rs1174987349 2521 dbSNP
rs757230540 2528 dbSNP
rs1308677545 2531 dbSNP
rs1034755761 2535 dbSNP
rs1185091225 2539 dbSNP
rs1487082515 2547 dbSNP
rs1243167842 2554 dbSNP
rs536787898 2563 dbSNP
rs1484985154 2573 dbSNP
rs958256707 2576 dbSNP
rs115588811 2579 dbSNP
rs1461305567 2590 dbSNP
rs1202139491 2594 dbSNP
rs1021103189 2597 dbSNP
rs1245315885 2597 dbSNP
rs560256441 2600 dbSNP
rs111586878 2603 dbSNP
rs1298713898 2615 dbSNP
rs970901392 2642 dbSNP
rs57686124 2644 dbSNP
rs1417644365 2648 dbSNP
rs1430381088 2650 dbSNP
rs1171534253 2656 dbSNP
rs1314133994 2659 dbSNP
rs1428475352 2664 dbSNP
rs374380719 2665 dbSNP
rs1353535848 2666 dbSNP
rs1394096294 2669 dbSNP
rs1430657108 2673 dbSNP
rs564492086 2676 dbSNP
rs1424716041 2699 dbSNP
rs1187686150 2701 dbSNP
rs190119893 2707 dbSNP
rs978425940 2709 dbSNP
rs569573766 2711 dbSNP
rs1211662141 2714 dbSNP
rs1178527348 2721 dbSNP
rs984137452 2732 dbSNP
rs1249834383 2738 dbSNP
rs909910512 2739 dbSNP
rs1406465607 2745 dbSNP
rs923744479 2746 dbSNP
rs779768156 2748 dbSNP
rs367747169 2750 dbSNP
rs532321048 2752 dbSNP
rs1353431330 2759 dbSNP
rs1295104222 2768 dbSNP
rs1396075314 2770 dbSNP
rs1372064656 2771 dbSNP
rs1295959104 2772 dbSNP
rs1463138454 2778 dbSNP
rs1400618114 2785 dbSNP
rs1164600486 2789 dbSNP
rs865927444 2796 dbSNP
rs1040467223 2801 dbSNP
rs1418567930 2809 dbSNP
rs922043395 2813 dbSNP
rs113651477 2816 dbSNP
rs1272807968 2818 dbSNP
rs1212813791 2820 dbSNP
rs1282138680 2829 dbSNP
rs1332463589 2830 dbSNP
rs931969493 2837 dbSNP
rs1320846543 2852 dbSNP
rs1316276075 2860 dbSNP
rs1222168757 2862 dbSNP
rs1265559016 2870 dbSNP
rs1313080819 2882 dbSNP
rs115097972 2897 dbSNP
rs1240551512 2916 dbSNP
rs933176330 2920 dbSNP
rs537367358 2943 dbSNP
rs1324853917 2946 dbSNP
rs529956280 2954 dbSNP
rs548401542 2955 dbSNP
rs1439156722 2967 dbSNP
rs888868207 2972 dbSNP
rs1007743771 2983 dbSNP
rs1453587429 2990 dbSNP
rs1362599340 2991 dbSNP
rs566471660 2995 dbSNP
rs1268208997 2997 dbSNP
rs1437576 3000 dbSNP
rs1192060930 3001 dbSNP
rs1252575493 3001 dbSNP
rs182954472 3005 dbSNP
rs1425864831 3011 dbSNP
rs1009796555 3017 dbSNP
rs1349809769 3018 dbSNP
rs1258944325 3020 dbSNP
rs1240528997 3026 dbSNP
rs1021222689 3027 dbSNP
rs1353884661 3038 dbSNP
rs1302226693 3046 dbSNP
rs970853850 3063 dbSNP
rs377534753 3064 dbSNP
rs1324569987 3065 dbSNP
rs372682253 3068 dbSNP
rs1383407693 3095 dbSNP
rs1291184711 3097 dbSNP
rs1420376507 3101 dbSNP
rs1346568136 3102 dbSNP
rs1171862185 3118 dbSNP
rs796831309 3120 dbSNP
rs188052183 3122 dbSNP
rs1199277861 3124 dbSNP
rs959468051 3133 dbSNP
rs1446255385 3134 dbSNP
rs1343029424 3135 dbSNP
rs984642574 3141 dbSNP
rs959075197 3144 dbSNP
rs1488586354 3145 dbSNP
rs1012415889 3147 dbSNP
rs909858219 3149 dbSNP
rs968135944 3152 dbSNP
rs556396260 3153 dbSNP
rs3012519 3154 dbSNP
rs1223543877 3157 dbSNP
rs192229689 3177 dbSNP
rs933272548 3179 dbSNP
rs1375406276 3181 dbSNP
rs1311093634 3187 dbSNP
rs1217546478 3188 dbSNP
rs1167628236 3196 dbSNP
rs1291319339 3206 dbSNP
rs1489877967 3208 dbSNP
rs1474954420 3214 dbSNP
rs1233312071 3215 dbSNP
rs1195588165 3218 dbSNP
rs1371075311 3218 dbSNP
rs11443693 3220 dbSNP
rs1194929625 3220 dbSNP
rs1219657374 3220 dbSNP
rs1255943414 3220 dbSNP
rs1260320720 3220 dbSNP
rs1337055186 3220 dbSNP
rs1359686614 3220 dbSNP
rs1201754991 3221 dbSNP
rs1247189521 3236 dbSNP
rs1355359905 3237 dbSNP
rs1469601452 3249 dbSNP
rs921766724 3266 dbSNP
rs1416697268 3275 dbSNP
rs987302705 3279 dbSNP
rs1328290745 3281 dbSNP
rs1408361597 3292 dbSNP
rs910405247 3293 dbSNP
rs1398951857 3294 dbSNP
rs758848187 3296 dbSNP
rs1417034668 3298 dbSNP
rs1049627735 3299 dbSNP
rs553926695 3308 dbSNP
rs909193897 3312 dbSNP
rs1180473476 3314 dbSNP
rs1435665282 3326 dbSNP
rs940711732 3328 dbSNP
rs1162464832 3334 dbSNP
rs572483163 3336 dbSNP
rs893435054 3351 dbSNP
rs1271813362 3352 dbSNP
rs1230472625 3353 dbSNP
rs907500564 3354 dbSNP
rs1278997320 3365 dbSNP
rs1425992338 3376 dbSNP
rs546244853 3387 dbSNP
rs1379364035 3389 dbSNP
rs1332342733 3392 dbSNP
rs1447236645 3396 dbSNP
rs1393530007 3397 dbSNP
rs1323688681 3407 dbSNP
rs1406951282 3415 dbSNP
rs1414486227 3421 dbSNP
rs938939215 3431 dbSNP
rs945034955 3437 dbSNP
rs1042112399 3444 dbSNP
rs564347237 3445 dbSNP
rs1442047925 3447 dbSNP
rs1178933374 3470 dbSNP
rs1004228246 3474 dbSNP
rs894660470 3483 dbSNP
rs576338995 3491 dbSNP
rs1033840823 3495 dbSNP
rs895318095 3497 dbSNP
rs776511742 3500 dbSNP
rs1241412309 3501 dbSNP
rs1284233036 3502 dbSNP
rs1222110581 3504 dbSNP
rs80203236 3507 dbSNP
rs1310245504 3511 dbSNP
rs999631496 3516 dbSNP
rs1224780338 3526 dbSNP
rs1030918218 3529 dbSNP
rs1290633365 3540 dbSNP
rs1438406220 3544 dbSNP
rs1350366642 3548 dbSNP
rs765293813 3549 dbSNP
rs1398440975 3562 dbSNP
rs1437339773 3569 dbSNP
rs1381567927 3575 dbSNP
rs146318745 3575 dbSNP
rs976006814 3584 dbSNP
rs1392899421 3585 dbSNP
rs184182343 3591 dbSNP
rs1182823257 3602 dbSNP
rs954635551 3612 dbSNP
rs1382983649 3621 dbSNP
rs987804725 3623 dbSNP
rs1214353355 3632 dbSNP
rs1446037127 3637 dbSNP
rs867864522 3639 dbSNP
rs943198014 3644 dbSNP
rs989197418 3645 dbSNP
rs1345934317 3648 dbSNP
rs914987639 3649 dbSNP
rs548438246 3656 dbSNP
rs560259219 3660 dbSNP
rs1368109589 3661 dbSNP
rs1042059452 3672 dbSNP
rs1397994475 3673 dbSNP
rs527414403 3674 dbSNP
rs1298216674 3691 dbSNP
rs1403157390 3694 dbSNP
rs939591259 3707 dbSNP
rs928646820 3708 dbSNP
rs552201056 3713 dbSNP
rs1055804203 3714 dbSNP
rs895277537 3715 dbSNP
rs1336528184 3716 dbSNP
rs1434110179 3720 dbSNP
rs187947326 3721 dbSNP
rs1185149244 3722 dbSNP
rs1479066708 3727 dbSNP
rs139637096 3732 dbSNP
rs897227643 3736 dbSNP
rs994240493 3737 dbSNP
rs1484769940 3744 dbSNP
rs1257967449 3750 dbSNP
rs73464513 3753 dbSNP
rs1307138605 3754 dbSNP
rs1275016352 3762 dbSNP
rs1397089778 3763 dbSNP
rs947568780 3763 dbSNP
rs1278814972 3765 dbSNP
rs1413628950 3766 dbSNP
rs1458199641 3774 dbSNP
rs568446439 3776 dbSNP
rs1240983809 3779 dbSNP
rs1462494180 3780 dbSNP
rs1187724954 3787 dbSNP
rs1241226732 3793 dbSNP
rs535733431 3814 dbSNP
rs1169192906 3819 dbSNP
rs1426369673 3821 dbSNP
rs955574787 3825 dbSNP
rs1467556818 3827 dbSNP
rs763850524 3828 dbSNP
rs1164901643 3829 dbSNP
rs1404293288 3831 dbSNP
rs1422595139 3834 dbSNP
rs1258268729 3840 dbSNP
rs903638550 3842 dbSNP
rs1480400290 3845 dbSNP
rs78880357 3855 dbSNP
rs1196489048 3860 dbSNP
rs1030640253 3869 dbSNP
rs143028054 3869 dbSNP
rs1232546728 3877 dbSNP
rs1319860928 3879 dbSNP
rs964694515 3881 dbSNP
rs1396130153 3889 dbSNP
rs1372130325 3894 dbSNP
rs997412566 3896 dbSNP
rs989313255 3899 dbSNP
rs1028940783 3900 dbSNP
rs751375241 3909 dbSNP
rs1428700869 3910 dbSNP
rs1456802073 3919 dbSNP
rs1370722011 3933 dbSNP
rs1165540189 3934 dbSNP
rs1418614533 3938 dbSNP
rs1378697333 3944 dbSNP
rs572573332 3963 dbSNP
rs1016347523 3976 dbSNP
rs977849309 3978 dbSNP
rs962403948 3984 dbSNP
rs192421414 3995 dbSNP
rs1261179560 4000 dbSNP
rs558192177 4007 dbSNP
rs576628337 4010 dbSNP
rs1306470815 4016 dbSNP
rs1241781336 4027 dbSNP
rs140592344 4031 dbSNP
rs576608037 4041 dbSNP
rs1200882185 4045 dbSNP
rs1054833063 4047 dbSNP
rs916814981 4049 dbSNP
rs1283091413 4057 dbSNP
rs941639374 4058 dbSNP
rs1440513763 4059 dbSNP
rs749842918 4066 dbSNP
rs769990912 4070 dbSNP
rs1394730213 4079 dbSNP
rs1197878974 4087 dbSNP
rs1194916185 4109 dbSNP
rs1269359030 4114 dbSNP
rs1210296884 4115 dbSNP
rs1263220374 4116 dbSNP
rs1322316690 4121 dbSNP
rs184534193 4122 dbSNP
rs994186781 4125 dbSNP
rs1353942449 4127 dbSNP
rs1051616653 4128 dbSNP
rs1302281242 4131 dbSNP
rs1199244789 4133 dbSNP
rs1231518019 4141 dbSNP
rs891092365 4154 dbSNP
rs1333252869 4167 dbSNP
rs1302433626 4169 dbSNP
rs557016432 4173 dbSNP
rs916180261 4175 dbSNP
rs1339138984 4182 dbSNP
rs1007297425 4185 dbSNP
rs1018317670 4189 dbSNP
rs562045230 4191 dbSNP
rs1420439629 4194 dbSNP
rs1467892097 4197 dbSNP
rs1375042604 4212 dbSNP
rs775179885 4215 dbSNP
rs1171108016 4229 dbSNP
rs1467786292 4231 dbSNP
rs1379085442 4251 dbSNP
rs1043577059 4254 dbSNP
rs924812978 4258 dbSNP
rs1173580473 4259 dbSNP
rs866013433 4260 dbSNP
rs1384491164 4266 dbSNP
rs755634838 4269 dbSNP
rs1022109483 4270 dbSNP
rs966553808 4279 dbSNP
rs1277456368 4286 dbSNP
rs1300291521 4290 dbSNP
rs1346695599 4292 dbSNP
rs1341133919 4301 dbSNP
rs11992 4309 dbSNP
rs927711786 4311 dbSNP
rs868063755 4316 dbSNP
rs990873575 4322 dbSNP
rs1339062222 4324 dbSNP
rs916276200 4325 dbSNP
rs901492260 4335 dbSNP
rs1354834966 4349 dbSNP
rs13820 4351 dbSNP
rs997213885 4355 dbSNP
rs1397963525 4356 dbSNP
rs1050357206 4357 dbSNP
rs889071698 4359 dbSNP
rs1464941265 4360 dbSNP
rs1421379818 4370 dbSNP
rs941586991 4371 dbSNP
rs111445304 4373 dbSNP
rs1236320044 4374 dbSNP
rs1443741390 4377 dbSNP
rs1256481993 4380 dbSNP
rs1198377909 4384 dbSNP
rs1316513711 4387 dbSNP
rs1016481284 4396 dbSNP
rs1348308045 4401 dbSNP
rs1260537899 4403 dbSNP
rs1219711968 4410 dbSNP
rs1218269004 4427 dbSNP
rs1282451229 4433 dbSNP
rs918713634 4436 dbSNP
rs930150641 4442 dbSNP
rs961922060 4446 dbSNP
rs1051302822 4451 dbSNP
rs1328509555 4452 dbSNP
rs1445751087 4457 dbSNP
rs1490042583 4463 dbSNP
rs891204128 4468 dbSNP
rs1333129017 4482 dbSNP
rs1466043442 4483 dbSNP
rs993524519 4488 dbSNP
rs1007001081 4490 dbSNP
rs1473517749 4493 dbSNP
rs1368683543 4499 dbSNP
rs560090182 4512 dbSNP
rs1267358721 4514 dbSNP
rs1456173324 4516 dbSNP
rs1435469872 4518 dbSNP
rs1200242050 4526 dbSNP
rs960021154 4527 dbSNP
rs1288392561 4541 dbSNP
rs1230095671 4556 dbSNP
rs1040098523 4561 dbSNP
rs1308637314 4562 dbSNP
rs748950636 4563 dbSNP
rs527439218 4567 dbSNP
rs1361474031 4574 dbSNP
rs1424073204 4575 dbSNP
rs1311122917 4588 dbSNP
rs1442724435 4591 dbSNP
rs1349199855 4593 dbSNP
rs1321589574 4594 dbSNP
rs915914786 4598 dbSNP
rs1390753891 4601 dbSNP
rs1157560661 4605 dbSNP
rs1437383919 4605 dbSNP
rs1381831002 4619 dbSNP
rs1179616422 4623 dbSNP
rs1393006481 4625 dbSNP
rs969340404 4636 dbSNP
rs1245470233 4640 dbSNP
rs1010806222 4658 dbSNP
rs979052371 4679 dbSNP
rs1022225510 4680 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B HITS-CLIP data was present in Chi_ControlA_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control A HITS-CLIP data was present in Chi_ControlB_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000437994.2 | 3UTR | GAAUGUGGCUCAGUUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000437994.2 | 3UTR | GAAUGUGGCUCAGUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset Chi_ControlA_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control A
Location of target site ENST00000437994.2 | 3UTR | GAAUGUGGCUCAGUUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset Chi_ControlB_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control B
Location of target site ENST00000437994.2 | 3UTR | GAAUGUGGCUCAGUUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
77 hsa-miR-6751-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT130738 GATAD2B GATA zinc finger domain containing 2B 2 4
MIRT134924 CCND2 cyclin D2 2 2
MIRT273034 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT276645 KPNA3 karyopherin subunit alpha 3 2 6
MIRT446531 OAS2 2'-5'-oligoadenylate synthetase 2 2 2
MIRT456268 TDRKH tudor and KH domain containing 2 12
MIRT494454 BTG2 BTG anti-proliferation factor 2 2 2
MIRT494965 USP46 ubiquitin specific peptidase 46 2 2
MIRT496689 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT496697 RGS11 regulator of G protein signaling 11 2 2
MIRT504376 IRF4 interferon regulatory factor 4 2 6
MIRT510980 PFN2 profilin 2 2 6
MIRT512548 MFN2 mitofusin 2 2 6
MIRT513639 TP53INP2 tumor protein p53 inducible nuclear protein 2 2 2
MIRT514016 CAMSAP1 calmodulin regulated spectrin associated protein 1 2 4
MIRT514074 MTRNR2L6 MT-RNR2-like 6 2 2
MIRT515300 C15orf38-AP3S2 C15orf38-AP3S2 readthrough 2 4
MIRT517285 AP3S2 adaptor related protein complex 3 sigma 2 subunit 2 4
MIRT519075 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT520779 TCF23 transcription factor 23 2 2
MIRT522485 MFSD9 major facilitator superfamily domain containing 9 2 2
MIRT528856 PKP1 plakophilin 1 2 2
MIRT529081 PATE2 prostate and testis expressed 2 2 2
MIRT531209 PLA2G4D phospholipase A2 group IVD 2 2
MIRT533988 TAB3 TGF-beta activated kinase 1 and MAP3K7 binding protein 3 2 2
MIRT537024 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 2
MIRT537498 FAM168B family with sequence similarity 168 member B 2 2
MIRT553125 UBE2Z ubiquitin conjugating enzyme E2 Z 2 2
MIRT555591 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT556370 LUZP1 leucine zipper protein 1 2 2
MIRT569745 C2orf71 chromosome 2 open reading frame 71 2 2
MIRT570149 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT571243 FADS6 fatty acid desaturase 6 2 2
MIRT573065 TRIB1 tribbles pseudokinase 1 2 2
MIRT575533 Map4 microtubule-associated protein 4 2 2
MIRT575777 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT616558 ZNF512B zinc finger protein 512B 2 2
MIRT624851 ABI2 abl interactor 2 2 2
MIRT630078 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT631479 KLHL21 kelch like family member 21 2 2
MIRT632173 CCL22 C-C motif chemokine ligand 22 2 2
MIRT638397 QSOX2 quiescin sulfhydryl oxidase 2 2 4
MIRT641192 ISG20L2 interferon stimulated exonuclease gene 20 like 2 2 2
MIRT642562 TEX9 testis expressed 9 2 2
MIRT642935 KRTAP5-9 keratin associated protein 5-9 2 2
MIRT649703 ZNF175 zinc finger protein 175 2 2
MIRT650437 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT652113 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT652273 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT655215 PFKM phosphofructokinase, muscle 2 2
MIRT682778 ZNF852 zinc finger protein 852 2 2
MIRT683001 MUC20 mucin 20, cell surface associated 2 2
MIRT684320 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT689435 CYB561 cytochrome b561 2 2
MIRT693847 ZNF107 zinc finger protein 107 2 2
MIRT696715 TAX1BP3 Tax1 binding protein 3 2 2
MIRT698597 TEX261 testis expressed 261 2 2
MIRT699973 RREB1 ras responsive element binding protein 1 2 2
MIRT703310 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 2
MIRT706796 RAI1 retinoic acid induced 1 2 2
MIRT709004 CD109 CD109 molecule 2 2
MIRT709181 TBC1D10B TBC1 domain family member 10B 2 2
MIRT709835 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT711627 CORO1C coronin 1C 2 2
MIRT712634 RNF103-CHMP3 RNF103-CHMP3 readthrough 2 2
MIRT713694 CYB5R4 cytochrome b5 reductase 4 2 2
MIRT713752 SLC9A8 solute carrier family 9 member A8 2 2
MIRT714908 CHMP3 charged multivesicular body protein 3 2 2
MIRT716371 CBLL1 Cbl proto-oncogene like 1 2 2
MIRT718303 XPOT exportin for tRNA 2 2
MIRT718713 ANKRD18A ankyrin repeat domain 18A 2 2
MIRT718740 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT719441 NPTX2 neuronal pentraxin 2 2 2
MIRT720896 OTUD4 OTU deubiquitinase 4 2 2
MIRT722448 RXFP4 relaxin/insulin like family peptide receptor 4 2 2
MIRT723882 VKORC1 vitamin K epoxide reductase complex subunit 1 2 2
MIRT724586 SYNJ2BP synaptojanin 2 binding protein 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6751 Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780)
hsa-mir-6751 Triptolide 107985 NSC163062 sensitive Low Ovarian Cancer cell line (A2780)

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