pre-miRNA Information
pre-miRNA hsa-mir-7156   
Genomic Coordinates chr1: 77060143 - 77060202
Description Homo sapiens miR-7156 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-7156-5p
Sequence 1| UUGUUCUCAAACUGGCUGUCAGA |23
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs907711107 9 dbSNP
rs940406061 22 dbSNP
Putative Targets

Gene Information
Gene Symbol YTHDC1   
Synonyms YT521, YT521-B
Description YTH domain containing 1
Transcript NM_001031732   
Other Transcripts NM_133370   
Expression
Putative miRNA Targets on YTHDC1
3'UTR of YTHDC1
(miRNA target sites are highlighted)
>YTHDC1|NM_001031732|3'UTR
   1 TGGGCTTTTGGAAGCACTGATTGTTTAAAGATACAAAAAATCTTGTATTTTTTTTTTGTGTGTGTTTACAAGTAGTAAAT
  81 TTATTTTCAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTATC
 161 ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAA
 241 CAGTCCAAGAATGTAGATACTGATTCTTTCTCCATAAATGTTCTTATAGTGTGTTCATCCTAGAGTTATTTTTTTGTTTG
 321 TTTTTTTCCTTTTTGGATCTTGATTGATAACTGCCATGATATTTTGCTTTGATGTGTTTCTACATGTAGTTGCACACGGT
 401 TCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCT
 481 CTTGTTTTTTTCCCCATTGCCTCTTTTTTTAAAAAACTTATAAAGTCACTTTTTATTTTTCCTCAGTCTTCAATGACGAG
 561 AGCAATATTAAGAAGACATTGCTATCTAATTTTTAATCTTTTTAAATGAAAAATTCCTATGTTCAGTAGCGTGGTTGATG
 641 CTATTGTTTAGCCTTCCCCTCCAAATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGA
 721 TTCCCATATTCTACATTGCTACTGTTTTGTATAAAATAAATTGGTAAAGATTGACGGTTATCTTTTGTATCTTTTTCTTA
 801 TCCAATTGCAGGTTTGTTTTATTATGCAATAATGGACATAAAAGCATGCTTTTTGTTCAGGAATTTTAGGAACCCCATTT
 881 GCTTTTTTTGAGGCACACTTTAGCAGAAATGATTGACCTAGGCCTGTTGCATTAAAAGCTTACTTCTATTTCTAACATAA
 961 GATACACAGAGTTATGTTAATAATTTGGTTAAGTATTTATACACCTGATAACATTTTGAGTCTACTCTGATCACAGAATC
1041 GTTTATTTAGGTTTTCTATTTGTTGTTTTAGTCTTCTGTAAGTGAACGACTTTGTACATGCTTTCTACTTTACTTCATAA
1121 ATGGACTTTTAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTGGTAACCAACTATAACAT
1201 AGAAATAGAGCCGCTCAAGAAAACAGTTTATGAAATAATTTTTTTGAATTTTTTCTTGAGTTACACCTGGAGTTTTGGCC
1281 TTTGGAATTTGGCCTTTATAAACATTAGGAATATTTGAATGTTTGATTTTTTTATAGTATCAACAGTTGTACTGTGTACC
1361 AGATCACATAGTACAGTTTTACATTTAATCTATATTGGCCTGAAAAGAACAACACAGGCACTTTACTCTTAAAGGATATA
1441 ATAAACTATAGTTATACTGCATTCATATTCATACCAGCATGTAGTATCTTTCCCTGCATTCACAGAAGTTTTATTTACAA
1521 TGACAAAACTAAAGCCTGAGGATTTGTTTTAAATCTGCATTGTGGTAGAGAGGAAAAAGTACTTTTAAGGAAACCTGGGT
1601 TCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGATACATGGTAAGTCACTTCATTGGCATTTTGTGTATTCATCA
1681 GTAAGCTAGACAAGATGATAGCTACAGTTTAAGAATTTCTGTAACCATTATACAAAACTGGTAGGTAATATTAAAGGTAT
1761 TTTCCTGAAATAATAGGAATAAATACTGAGCACTTTGTATGCAATAGAGACTTTGTGCTTTTATATACAGACTCATTTAA
1841 ATGGGCTCAGAGAGGCTAGTAAACTTGCCCAAGATTAGAAAGGTAGTAATTGATGGGCCAAGATTTTACCCATGTTTTTA
1921 TTTGGTGTTTCTAAACCACCTCATCACTTTTGAAAAAACAGTATATAAATTAATAAATGTTTTGGAGATGGAGTCTGTCG
2001 CCCAGGTGGAGGGCAGTGGCATGATCTTGGCTCACTGCAACCTCCTGCCTCAGCCTCCCGAATGGCTGGGACTACAGGCA
2081 CCCACCACCACACCCCGCTAATTTTTGTAATTTTAGTAGAGATGGGGTTCCAACATGTTGGCCAGGCTGGTCTCAAACTC
2161 GACCTCAAGTGACCTCACCTGCCTCAGCCTCCTAAAGTGTTGGGATTACAGGCGTGAGCCACTGCACCTGGCCTGAGATT
2241 TTTAAACATTAACATTTCCTTCAGGCTTAAGCAGAGGATTTTTCTAAAGTGCCATCCAATTAGATGTTAAGTTATGCTTT
2321 GTATGTTGAGCTTAGTATTGAGTCGATCTATTTTAAAAAGCCAACATTAAGTTTTTACCAAGTATCTGGCACTATTCTAA
2401 ACAATTCTGTTGGCTCACATAATCATCACTGTTTTCTCCTTTCCTAATTTTTAAAATAAACTTACCGGAACATTGTATAA
2481 AAAATGCAAGATTTTTTTCTGTACAGAAGAGTCAGTATATAAAAATCAGTATGTTTTATTTAATATTCGTACACATGACA
2561 GCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGCTGTGATTCTAACAATCTACATTAGTATGAT
2641 GTGTTCAGATGAAAAACAGAAAATTCAGTCATTCCGAGTTTAGAAATCCGGTCAGGGATTTTATTGGCTGGAGTAATAGT
2721 TCAAAGGAGTGAAAATTCAAGCATGTAATTTTTGGATTTGATTTCCTCCATAATGATTTCCTCCATAATGGCTTTTTTTC
2801 AAGCATGGTCTAATTTTTCAGAAAATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGAGA
2881 CTATTTTCCTCCCAGTGTCCATGTCAGTTCCCCAAAAGGACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAA
2961 TCTGTATTTCCAAGGAAATGGGGTTCTTTGTCTCCCAGCATTGGGAAGCAAGAGAGGCACATGTTATGGTCACCTCTGTG
3041 AGGATTACATCAGGAAGGACAGTCTCCAAAAGACATGGACAGAGGAAATTTAGCAGATGTCCATTAAATCAGGATCTCAT
3121 ACAAGTTATAACACCTGAATGTTTGACTTTTCAGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCT
3201 ACATTCTGCTGTAGAATGTCGTGGTCTTTCTGAGGGTCACATACATCCTGTCTTGTCATAATGTTAACCATTAAGAGTCC
3281 TCAGGGGCATGGAATTGAAGAAGGAACTGTTGCCAGCAGTTAACTGACCAAGCTAGAGTTCCCTGACCCAACGTAAGGGT
3361 GACTGTGACACACATGGATAATTTTAGCTTCATGTTTAAGATTTTGTTATTTGGGTAGGAAACATTCCAAATGCAGTTTG
3441 AAACACATATTAAAATTGAGGCACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAATAGGAA
3521 TCCTTAGAGTATAAGCAATCCATGCATAGTATTCTGTTATCTATCATGTAGATCATTTAATCTCTAATTTTTTGGGGTGG
3601 GGATTCTCTTGTTTCTAAATCTTACACTTTCAGTTTCTTCTGTGTCTTAAATATAGATTATTGACTATTGTCTTAAATAC
3681 TAATAAATACATTAAATGTATCTTAAATACTAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agACUGUCG------GUCAAACUCUUGUu 5'
            |||||||      || | |||||| | 
Target 5' caTGACAGCTTTTGTCACTGTGAGAAGAc 3'
2554 - 2582 139.00 -15.10
2
miRNA  3' agACUGUCGGUCAAACUCUUGUu 5'
            || |: |||| | |||::|| 
Target 5' tcTGTCGCCCAGGTGGAGGGCAg 3'
1994 - 2016 137.00 -21.70
3
miRNA  3' agacugucGGUCA-AA-------CUCUUGUu 5'
                  :|||| ||       ||||:|| 
Target 5' atttttccTCAGTCTTCAATGACGAGAGCAa 3'
535 - 565 127.00 -12.34
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30184423 13 COSMIC
COSN25218093 17 COSMIC
COSN30146027 42 COSMIC
COSN2042726 47 COSMIC
COSN2534888 47 COSMIC
COSN18729074 56 COSMIC
COSN9051050 160 COSMIC
COSN28811860 179 COSMIC
COSN9051049 200 COSMIC
COSN21621462 201 COSMIC
COSN31602618 243 COSMIC
COSN8491259 274 COSMIC
COSN31529757 320 COSMIC
COSN26152370 382 COSMIC
COSN5063340 507 COSMIC
COSN30542642 518 COSMIC
COSN6841921 522 COSMIC
COSN31585234 589 COSMIC
COSN31564561 630 COSMIC
COSN31535816 672 COSMIC
COSN31534614 718 COSMIC
COSN31593081 757 COSMIC
COSN15818108 970 COSMIC
COSN20091049 1353 COSMIC
COSN15677428 1447 COSMIC
COSN2042725 1455 COSMIC
COSN31959915 1638 COSMIC
COSN15067830 1643 COSMIC
COSN15309724 2121 COSMIC
COSN20593591 2444 COSMIC
COSN23539094 2792 COSMIC
COSN7503313 2891 COSMIC
COSN5858277 2937 COSMIC
COSN2042724 3044 COSMIC
COSN25067161 3439 COSMIC
COSN9051048 3502 COSMIC
COSN25715903 3593 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1465957847 10 dbSNP
rs763073471 15 dbSNP
rs753031727 17 dbSNP
rs751765385 21 dbSNP
rs759604032 22 dbSNP
rs986103929 26 dbSNP
rs1247186299 32 dbSNP
rs1201181691 33 dbSNP
rs776881032 34 dbSNP
rs767529967 35 dbSNP
rs538932785 36 dbSNP
rs774272944 38 dbSNP
rs768559053 39 dbSNP
rs749039491 40 dbSNP
rs1346373335 41 dbSNP
rs775146566 42 dbSNP
rs769350398 45 dbSNP
rs77120616 48 dbSNP
rs777521762 48 dbSNP
rs1330689184 52 dbSNP
rs189030016 56 dbSNP
rs1327092601 57 dbSNP
rs79205979 57 dbSNP
rs1227885514 58 dbSNP
rs1353161414 58 dbSNP
rs143621035 58 dbSNP
rs1443173424 60 dbSNP
rs964092437 62 dbSNP
rs550156784 64 dbSNP
rs978031353 65 dbSNP
rs1455516323 72 dbSNP
rs1442935126 76 dbSNP
rs1387067023 79 dbSNP
rs1249507209 85 dbSNP
rs1158881068 90 dbSNP
rs1182224600 100 dbSNP
rs967562642 100 dbSNP
rs549305480 101 dbSNP
rs1464181868 125 dbSNP
rs1171192562 130 dbSNP
rs1415390662 134 dbSNP
rs991922786 137 dbSNP
rs955550330 139 dbSNP
rs960421078 158 dbSNP
rs1033318293 160 dbSNP
rs999703283 161 dbSNP
rs567706342 163 dbSNP
rs1255620832 168 dbSNP
rs902875179 168 dbSNP
rs35250360 169 dbSNP
rs758357764 170 dbSNP
rs1186123624 171 dbSNP
rs1463885625 178 dbSNP
rs547560395 182 dbSNP
rs527814805 185 dbSNP
rs1430946735 190 dbSNP
rs1264501649 199 dbSNP
rs1001811240 206 dbSNP
rs559254777 209 dbSNP
rs1344815136 210 dbSNP
rs1027565706 218 dbSNP
rs1011287778 221 dbSNP
rs552366688 225 dbSNP
rs1308716409 231 dbSNP
rs1236856516 241 dbSNP
rs139009800 253 dbSNP
rs1398808173 260 dbSNP
rs897661288 263 dbSNP
rs563243264 264 dbSNP
rs1348876759 267 dbSNP
rs1296896768 270 dbSNP
rs1300901784 276 dbSNP
rs185148719 284 dbSNP
rs1328088430 285 dbSNP
rs567902563 287 dbSNP
rs1295059261 293 dbSNP
rs192775885 297 dbSNP
rs1318939212 316 dbSNP
rs1395215850 320 dbSNP
rs1047034670 328 dbSNP
rs867974338 328 dbSNP
rs1399870549 329 dbSNP
rs1487247592 333 dbSNP
rs1208695298 336 dbSNP
rs1314324704 337 dbSNP
rs1469491833 340 dbSNP
rs889193511 344 dbSNP
rs1388629820 349 dbSNP
rs1434877705 359 dbSNP
rs1171797825 361 dbSNP
rs1270916752 366 dbSNP
rs1375259651 371 dbSNP
rs560971897 372 dbSNP
rs765766028 374 dbSNP
rs1456487992 389 dbSNP
rs1292968233 392 dbSNP
rs1395514037 395 dbSNP
rs1050442083 397 dbSNP
rs1166115514 398 dbSNP
rs1364268189 400 dbSNP
rs1228840676 403 dbSNP
rs540745572 404 dbSNP
rs926230175 405 dbSNP
rs373849163 423 dbSNP
rs974106171 424 dbSNP
rs1041979181 428 dbSNP
rs572125160 437 dbSNP
rs1206504228 439 dbSNP
rs1375268893 447 dbSNP
rs942675678 450 dbSNP
rs946249848 479 dbSNP
rs551183607 481 dbSNP
rs752851554 487 dbSNP
rs1254428415 491 dbSNP
rs1422526374 493 dbSNP
rs911320661 496 dbSNP
rs992928117 501 dbSNP
rs1486094531 505 dbSNP
rs960471886 506 dbSNP
rs1031145178 507 dbSNP
rs926356258 510 dbSNP
rs1226237035 511 dbSNP
rs980439801 511 dbSNP
rs1321802803 516 dbSNP
rs951754814 521 dbSNP
rs1293823804 535 dbSNP
rs1356876252 535 dbSNP
rs765594951 545 dbSNP
rs139588027 546 dbSNP
rs1244059933 555 dbSNP
rs1267140911 556 dbSNP
rs993447841 557 dbSNP
rs1022493938 558 dbSNP
rs1262798989 564 dbSNP
rs562761304 577 dbSNP
rs962243052 578 dbSNP
rs1181852221 592 dbSNP
rs1258803759 595 dbSNP
rs1476251717 598 dbSNP
rs1018810772 611 dbSNP
rs1180056421 613 dbSNP
rs1314419577 614 dbSNP
rs1411534954 616 dbSNP
rs1401444058 617 dbSNP
rs1415189795 617 dbSNP
rs1161025596 618 dbSNP
rs1357280389 619 dbSNP
rs1465345878 626 dbSNP
rs558848765 630 dbSNP
rs537778880 631 dbSNP
rs36215898 633 dbSNP
rs1050490807 641 dbSNP
rs1373618569 643 dbSNP
rs1225184499 649 dbSNP
rs1411146533 656 dbSNP
rs1298726175 657 dbSNP
rs1310862641 659 dbSNP
rs1000245662 661 dbSNP
rs539242024 664 dbSNP
rs1396679172 678 dbSNP
rs1162138122 695 dbSNP
rs1046898453 698 dbSNP
rs1472724831 699 dbSNP
rs1416367743 703 dbSNP
rs1251085298 704 dbSNP
rs929788760 710 dbSNP
rs376494286 711 dbSNP
rs1423297099 712 dbSNP
rs1251331496 718 dbSNP
rs145019135 719 dbSNP
rs942724383 721 dbSNP
rs911197079 724 dbSNP
rs1307338374 725 dbSNP
rs917476934 726 dbSNP
rs934050723 733 dbSNP
rs1291472680 735 dbSNP
rs1366421241 748 dbSNP
rs1234049528 749 dbSNP
rs1057252087 753 dbSNP
rs978263055 762 dbSNP
rs968183915 769 dbSNP
rs915515196 771 dbSNP
rs1206674801 774 dbSNP
rs991016655 775 dbSNP
rs1209328403 776 dbSNP
rs189759054 777 dbSNP
rs1354104872 787 dbSNP
rs184538924 789 dbSNP
rs1003046587 800 dbSNP
rs1233637859 802 dbSNP
rs530679184 805 dbSNP
rs971207264 809 dbSNP
rs754187947 816 dbSNP
rs1162034849 820 dbSNP
rs1348956294 825 dbSNP
rs777245218 827 dbSNP
rs1025397890 829 dbSNP
rs1373719789 835 dbSNP
rs536312166 838 dbSNP
rs1270166741 845 dbSNP
rs1286070514 846 dbSNP
rs768573552 849 dbSNP
rs951862543 850 dbSNP
rs1334255667 851 dbSNP
rs747146538 855 dbSNP
rs1255103098 858 dbSNP
rs2293594 863 dbSNP
rs1192154105 880 dbSNP
rs1038308537 896 dbSNP
rs2293595 897 dbSNP
rs1412528113 904 dbSNP
rs1461494963 909 dbSNP
rs1018871899 917 dbSNP
rs552040382 923 dbSNP
rs1051071077 926 dbSNP
rs191388024 942 dbSNP
rs746143000 948 dbSNP
rs186632787 952 dbSNP
rs946912498 956 dbSNP
rs1028790279 957 dbSNP
rs1282934006 958 dbSNP
rs915379153 963 dbSNP
rs1233945309 965 dbSNP
rs762331048 966 dbSNP
rs1411773145 970 dbSNP
rs1275319527 972 dbSNP
rs184921416 974 dbSNP
rs142736618 975 dbSNP
rs904576759 977 dbSNP
rs1233685998 991 dbSNP
rs1198197248 997 dbSNP
rs928199849 1001 dbSNP
rs1020312454 1002 dbSNP
rs1185402807 1002 dbSNP
rs1256690106 1015 dbSNP
rs1010633828 1016 dbSNP
rs1467225402 1018 dbSNP
rs1475270294 1021 dbSNP
rs896108402 1031 dbSNP
rs529966084 1040 dbSNP
rs551822908 1041 dbSNP
rs541033623 1044 dbSNP
rs1386209428 1050 dbSNP
rs1048515858 1058 dbSNP
rs1225279578 1062 dbSNP
rs115098462 1066 dbSNP
rs138335579 1068 dbSNP
rs1415502463 1070 dbSNP
rs1433648624 1078 dbSNP
rs770894694 1087 dbSNP
rs940343916 1088 dbSNP
rs757081126 1108 dbSNP
rs1198481643 1111 dbSNP
rs559807149 1115 dbSNP
rs545167412 1126 dbSNP
rs1485927734 1138 dbSNP
rs1212416685 1142 dbSNP
rs1248895325 1147 dbSNP
rs1388563502 1149 dbSNP
rs987386659 1151 dbSNP
rs1182142175 1152 dbSNP
rs1365153727 1153 dbSNP
rs1157310724 1160 dbSNP
rs953250468 1162 dbSNP
rs1172111110 1165 dbSNP
rs1028841281 1167 dbSNP
rs1408942280 1169 dbSNP
rs1172259315 1170 dbSNP
rs532521271 1172 dbSNP
rs1329839356 1181 dbSNP
rs1452658671 1186 dbSNP
rs1230816385 1189 dbSNP
rs1302340955 1192 dbSNP
rs1348507928 1193 dbSNP
rs576696673 1202 dbSNP
rs1236483622 1203 dbSNP
rs1272364314 1206 dbSNP
rs556826451 1212 dbSNP
rs746839418 1213 dbSNP
rs1449458963 1216 dbSNP
rs978988331 1220 dbSNP
rs998218943 1225 dbSNP
rs968854678 1229 dbSNP
rs2293596 1233 dbSNP
rs1042461867 1235 dbSNP
rs1176129939 1238 dbSNP
rs1371814727 1239 dbSNP
rs1010271332 1240 dbSNP
rs895824345 1245 dbSNP
rs758649312 1246 dbSNP
rs1398919330 1248 dbSNP
rs1055334839 1255 dbSNP
rs1325467400 1255 dbSNP
rs1371525673 1259 dbSNP
rs574290609 1262 dbSNP
rs1217186568 1276 dbSNP
rs928263168 1281 dbSNP
rs1306803577 1292 dbSNP
rs1001755411 1293 dbSNP
rs116172989 1294 dbSNP
rs1227054562 1298 dbSNP
rs1048569890 1309 dbSNP
rs931472990 1319 dbSNP
rs192426822 1320 dbSNP
rs1287666639 1326 dbSNP
rs1195845120 1332 dbSNP
rs1433292927 1334 dbSNP
rs1346233109 1337 dbSNP
rs1333931415 1339 dbSNP
rs1260283685 1343 dbSNP
rs1433032524 1344 dbSNP
rs972480488 1350 dbSNP
rs1374924582 1353 dbSNP
rs1036530530 1354 dbSNP
rs962419324 1360 dbSNP
rs188429653 1365 dbSNP
rs558222759 1369 dbSNP
rs940411931 1388 dbSNP
rs1017086900 1392 dbSNP
rs1286842873 1393 dbSNP
rs1448982605 1393 dbSNP
rs1361190318 1394 dbSNP
rs755537532 1395 dbSNP
rs1417272440 1405 dbSNP
rs911577229 1411 dbSNP
rs987103575 1415 dbSNP
rs1236614060 1416 dbSNP
rs1208482526 1425 dbSNP
rs1232115265 1429 dbSNP
rs183594025 1436 dbSNP
rs921828260 1438 dbSNP
rs998479783 1439 dbSNP
rs978656385 1443 dbSNP
rs191284559 1448 dbSNP
rs368980830 1455 dbSNP
rs1206297110 1456 dbSNP
rs989321103 1465 dbSNP
rs1216771348 1476 dbSNP
rs1474286446 1483 dbSNP
rs1187255043 1492 dbSNP
rs1418869120 1492 dbSNP
rs960084392 1497 dbSNP
rs1476272245 1506 dbSNP
rs893933371 1517 dbSNP
rs1055602388 1520 dbSNP
rs1035683218 1521 dbSNP
rs938223125 1526 dbSNP
rs1283927597 1529 dbSNP
rs906666856 1532 dbSNP
rs1373506518 1550 dbSNP
rs1046662527 1554 dbSNP
rs188241340 1555 dbSNP
rs918264260 1556 dbSNP
rs1221777843 1560 dbSNP
rs1305831119 1563 dbSNP
rs1216906846 1579 dbSNP
rs1316741892 1579 dbSNP
rs182401470 1581 dbSNP
rs755472116 1585 dbSNP
rs1210261062 1587 dbSNP
rs995740801 1595 dbSNP
rs1175752249 1600 dbSNP
rs1313771078 1602 dbSNP
rs897315872 1612 dbSNP
rs150418797 1615 dbSNP
rs1393210352 1616 dbSNP
rs985598901 1627 dbSNP
rs1172627720 1628 dbSNP
rs752254962 1630 dbSNP
rs547029232 1631 dbSNP
rs1373552187 1639 dbSNP
rs1029884463 1643 dbSNP
rs1051450835 1647 dbSNP
rs931634006 1648 dbSNP
rs140301249 1650 dbSNP
rs754382338 1652 dbSNP
rs1234277046 1669 dbSNP
rs1281641929 1671 dbSNP
rs375568223 1673 dbSNP
rs1350200366 1680 dbSNP
rs1202475822 1683 dbSNP
rs966634725 1683 dbSNP
rs1481048689 1684 dbSNP
rs1476085772 1685 dbSNP
rs766707693 1691 dbSNP
rs947302075 1692 dbSNP
rs1453557972 1699 dbSNP
rs17089253 1700 dbSNP
rs750831994 1701 dbSNP
rs960137874 1708 dbSNP
rs1033783494 1710 dbSNP
rs928723529 1713 dbSNP
rs375347116 1721 dbSNP
rs1354760921 1722 dbSNP
rs980107968 1726 dbSNP
rs1252498411 1730 dbSNP
rs970041466 1731 dbSNP
rs1204638945 1733 dbSNP
rs545106021 1736 dbSNP
rs996176887 1739 dbSNP
rs898118710 1748 dbSNP
rs961618833 1774 dbSNP
rs1304848905 1779 dbSNP
rs1016204555 1783 dbSNP
rs1347694455 1793 dbSNP
rs1212894667 1796 dbSNP
rs1037939198 1804 dbSNP
rs531459725 1806 dbSNP
rs941033150 1810 dbSNP
rs1200816207 1811 dbSNP
rs1271480902 1815 dbSNP
rs1467897513 1816 dbSNP
rs909509174 1817 dbSNP
rs1049510228 1819 dbSNP
rs1357823492 1821 dbSNP
rs1294134199 1822 dbSNP
rs8180367 1826 dbSNP
rs1008380367 1831 dbSNP
rs189737593 1832 dbSNP
rs767196347 1833 dbSNP
rs890247607 1834 dbSNP
rs1051501961 1836 dbSNP
rs995892080 1838 dbSNP
rs900185984 1840 dbSNP
rs932351305 1845 dbSNP
rs1042700554 1848 dbSNP
rs976596700 1855 dbSNP
rs1393228559 1856 dbSNP
rs543253248 1863 dbSNP
rs148259657 1864 dbSNP
rs1333336383 1868 dbSNP
rs1462588709 1868 dbSNP
rs1429322846 1872 dbSNP
rs1349195477 1873 dbSNP
rs966500089 1875 dbSNP
rs947322189 1876 dbSNP
rs1334371841 1877 dbSNP
rs1214105163 1881 dbSNP
rs1291850529 1884 dbSNP
rs913130325 1885 dbSNP
rs1445053739 1889 dbSNP
rs1162761480 1890 dbSNP
rs1473408689 1891 dbSNP
rs1242601028 1893 dbSNP
rs1462805258 1907 dbSNP
rs1185093747 1908 dbSNP
rs989329023 1908 dbSNP
rs1166639431 1909 dbSNP
rs1418387215 1911 dbSNP
rs958084034 1912 dbSNP
rs1052925470 1920 dbSNP
rs1318289085 1921 dbSNP
rs116324797 1922 dbSNP
rs1416891766 1923 dbSNP
rs114086281 1925 dbSNP
rs1311074756 1928 dbSNP
rs971253482 1932 dbSNP
rs577952926 1933 dbSNP
rs1286154681 1947 dbSNP
rs993689145 1950 dbSNP
rs1487901750 1952 dbSNP
rs754675880 1959 dbSNP
rs1212443421 1960 dbSNP
rs1037968964 1962 dbSNP
rs980161818 1963 dbSNP
rs948780603 1965 dbSNP
rs557757529 1975 dbSNP
rs1485705412 1979 dbSNP
rs974086405 1979 dbSNP
rs1315310335 1982 dbSNP
rs537920019 1984 dbSNP
rs575346713 1999 dbSNP
rs555897363 2000 dbSNP
rs922371751 2006 dbSNP
rs1409364273 2010 dbSNP
rs1422137636 2013 dbSNP
rs1370413906 2016 dbSNP
rs1415443493 2024 dbSNP
rs1040759722 2033 dbSNP
rs536447364 2040 dbSNP
rs913715039 2042 dbSNP
rs955533092 2045 dbSNP
rs1213091660 2047 dbSNP
rs989361108 2059 dbSNP
rs1279495856 2060 dbSNP
rs567393128 2060 dbSNP
rs1158098151 2063 dbSNP
rs1248005112 2065 dbSNP
rs767877377 2070 dbSNP
rs1028455514 2073 dbSNP
rs995939734 2075 dbSNP
rs1214292830 2081 dbSNP
rs1441905536 2083 dbSNP
rs981218972 2091 dbSNP
rs970735278 2093 dbSNP
rs900236451 2094 dbSNP
rs1466639478 2095 dbSNP
rs547656100 2096 dbSNP
rs1011239144 2097 dbSNP
rs1329771244 2098 dbSNP
rs1250526344 2118 dbSNP
rs962221196 2122 dbSNP
rs1438401598 2130 dbSNP
rs1302620105 2132 dbSNP
rs891743426 2134 dbSNP
rs1052975191 2136 dbSNP
rs533873314 2144 dbSNP
rs1254211549 2146 dbSNP
rs1338168424 2147 dbSNP
rs938564884 2148 dbSNP
rs1459397636 2150 dbSNP
rs184975695 2154 dbSNP
rs571197224 2156 dbSNP
rs1434191560 2157 dbSNP
rs1201638133 2158 dbSNP
rs889407091 2158 dbSNP
rs1461523055 2160 dbSNP
rs1171707807 2161 dbSNP
rs1402675971 2167 dbSNP
rs1324904959 2171 dbSNP
rs1050683768 2173 dbSNP
rs1388508183 2178 dbSNP
rs1293324300 2180 dbSNP
rs1227474607 2184 dbSNP
rs1279726413 2187 dbSNP
rs1332144728 2196 dbSNP
rs1212218830 2197 dbSNP
rs1240109152 2202 dbSNP
rs1347431169 2204 dbSNP
rs1212198267 2212 dbSNP
rs568794228 2213 dbSNP
rs531394548 2214 dbSNP
rs1040791978 2216 dbSNP
rs1164463382 2220 dbSNP
rs1368886769 2225 dbSNP
rs1459221935 2230 dbSNP
rs1287081659 2238 dbSNP
rs945089868 2239 dbSNP
rs1400097535 2246 dbSNP
rs1299427975 2247 dbSNP
rs1371607765 2248 dbSNP
rs1232358282 2253 dbSNP
rs1293500140 2255 dbSNP
rs1317619493 2259 dbSNP
rs1322736358 2277 dbSNP
rs1380298593 2278 dbSNP
rs974518467 2286 dbSNP
rs1386953244 2297 dbSNP
rs1289237794 2298 dbSNP
rs1259506134 2302 dbSNP
rs892307732 2310 dbSNP
rs562575127 2314 dbSNP
rs549148101 2315 dbSNP
rs908503289 2316 dbSNP
rs1187552205 2320 dbSNP
rs1174927188 2327 dbSNP
rs1454366126 2328 dbSNP
rs774836622 2329 dbSNP
rs987052901 2340 dbSNP
rs955580283 2343 dbSNP
rs564076830 2344 dbSNP
rs926555309 2344 dbSNP
rs181941038 2345 dbSNP
rs1373141942 2351 dbSNP
rs1413594975 2361 dbSNP
rs1303095391 2369 dbSNP
rs980700307 2371 dbSNP
rs543191211 2373 dbSNP
rs949427560 2379 dbSNP
rs1353430632 2382 dbSNP
rs917898963 2396 dbSNP
rs1288746086 2397 dbSNP
rs972142515 2399 dbSNP
rs560556560 2401 dbSNP
rs1485445944 2402 dbSNP
rs796471893 2407 dbSNP
rs10033058 2409 dbSNP
rs1011710055 2416 dbSNP
rs771000723 2419 dbSNP
rs1348763797 2425 dbSNP
rs1269517169 2426 dbSNP
rs1393145734 2429 dbSNP
rs953560969 2430 dbSNP
rs891465506 2431 dbSNP
rs1328145917 2437 dbSNP
rs1031276075 2438 dbSNP
rs1460209562 2444 dbSNP
rs1002756720 2448 dbSNP
rs997757521 2450 dbSNP
rs1295965024 2453 dbSNP
rs1376683740 2456 dbSNP
rs900850684 2458 dbSNP
rs907113085 2465 dbSNP
rs578203344 2466 dbSNP
rs773083817 2467 dbSNP
rs898608220 2469 dbSNP
rs1038460870 2471 dbSNP
rs1314013472 2474 dbSNP
rs1202750692 2483 dbSNP
rs1250938070 2485 dbSNP
rs1053522146 2487 dbSNP
rs564102562 2489 dbSNP
rs940060659 2491 dbSNP
rs6852163 2498 dbSNP
rs575285455 2499 dbSNP
rs550631570 2516 dbSNP
rs1191698192 2525 dbSNP
rs1426729284 2528 dbSNP
rs1169349083 2529 dbSNP
rs904996373 2529 dbSNP
rs1375320440 2534 dbSNP
rs555436092 2538 dbSNP
rs1333712498 2541 dbSNP
rs1392735955 2542 dbSNP
rs1436472212 2542 dbSNP
rs1475115545 2543 dbSNP
rs562760176 2543 dbSNP
rs934255001 2545 dbSNP
rs921514016 2546 dbSNP
rs976021974 2548 dbSNP
rs968254427 2549 dbSNP
rs1200310984 2555 dbSNP
rs915357301 2556 dbSNP
rs201021688 2557 dbSNP
rs375867824 2557 dbSNP
rs989937090 2565 dbSNP
rs1248348982 2572 dbSNP
rs1484619934 2574 dbSNP
rs1185372036 2576 dbSNP
rs1423908342 2578 dbSNP
rs535611324 2594 dbSNP
rs1162335813 2595 dbSNP
rs375102705 2595 dbSNP
rs115242312 2599 dbSNP
rs1324815908 2604 dbSNP
rs1194174831 2605 dbSNP
rs755109115 2611 dbSNP
rs1341206578 2618 dbSNP
rs1022827292 2620 dbSNP
rs1341336478 2622 dbSNP
rs553709649 2623 dbSNP
rs898330339 2624 dbSNP
rs1291955267 2625 dbSNP
rs1029123869 2628 dbSNP
rs1038586954 2630 dbSNP
rs186894964 2633 dbSNP
rs1256314479 2637 dbSNP
rs780470939 2639 dbSNP
rs1294736121 2643 dbSNP
rs1004329400 2648 dbSNP
rs1414943032 2649 dbSNP
rs1399536240 2652 dbSNP
rs773327539 2657 dbSNP
rs1158556775 2661 dbSNP
rs756674403 2666 dbSNP
rs750701639 2667 dbSNP
rs1326237280 2669 dbSNP
rs966301882 2675 dbSNP
rs1448487342 2676 dbSNP
rs17592288 2679 dbSNP
rs571574949 2687 dbSNP
rs892117761 2688 dbSNP
rs143127400 2689 dbSNP
rs752460327 2690 dbSNP
rs1442566877 2695 dbSNP
rs1167572518 2706 dbSNP
rs946937707 2710 dbSNP
rs1292120469 2712 dbSNP
rs1438195788 2713 dbSNP
rs1178609212 2714 dbSNP
rs1000597198 2723 dbSNP
rs1421607491 2738 dbSNP
rs1171771262 2748 dbSNP
rs537837412 2770 dbSNP
rs1415318800 2773 dbSNP
rs1336381334 2776 dbSNP
rs1044869044 2779 dbSNP
rs1013416439 2785 dbSNP
rs896441089 2789 dbSNP
rs1251137978 2791 dbSNP
rs1273799904 2791 dbSNP
rs1345091489 2791 dbSNP
rs1201872000 2793 dbSNP
rs988700172 2796 dbSNP
rs1332588184 2800 dbSNP
rs1274750350 2807 dbSNP
rs940686680 2812 dbSNP
rs1198345236 2820 dbSNP
rs909193958 2824 dbSNP
rs1239325936 2827 dbSNP
rs1442160086 2831 dbSNP
rs955810667 2836 dbSNP
rs924360710 2840 dbSNP
rs1377189749 2841 dbSNP
rs1478381352 2842 dbSNP
rs17089252 2855 dbSNP
rs922003768 2856 dbSNP
rs1277463475 2857 dbSNP
rs142309075 2864 dbSNP
rs6826205 2872 dbSNP
rs1380720915 2874 dbSNP
rs1012853883 2875 dbSNP
rs962917060 2880 dbSNP
rs1324640284 2883 dbSNP
rs913513996 2885 dbSNP
rs988992076 2886 dbSNP
rs1268059891 2888 dbSNP
rs956391105 2895 dbSNP
rs1259176433 2896 dbSNP
rs1031967540 2901 dbSNP
rs1016792394 2903 dbSNP
rs1459354377 2907 dbSNP
rs1004451921 2910 dbSNP
rs969196489 2915 dbSNP
rs1167502984 2919 dbSNP
rs370599509 2927 dbSNP
rs1406356874 2928 dbSNP
rs1023801473 2934 dbSNP
rs1407502341 2937 dbSNP
rs1477655172 2941 dbSNP
rs776315664 2946 dbSNP
rs887225397 2949 dbSNP
rs181865608 2951 dbSNP
rs546894080 2952 dbSNP
rs1471197272 2959 dbSNP
rs896293900 2964 dbSNP
rs1391293125 2966 dbSNP
rs375845079 2974 dbSNP
rs1036301384 2977 dbSNP
rs899853559 2982 dbSNP
rs1339261110 2990 dbSNP
rs145048178 2991 dbSNP
rs1467044148 2993 dbSNP
rs1279666949 3000 dbSNP
rs1254861341 3003 dbSNP
rs1320488009 3008 dbSNP
rs1243011065 3018 dbSNP
rs947020724 3018 dbSNP
rs1715081 3019 dbSNP
rs113931288 3020 dbSNP
rs772852896 3021 dbSNP
rs771969529 3034 dbSNP
rs1487990372 3036 dbSNP
rs1194703411 3038 dbSNP
rs1265557819 3038 dbSNP
rs931973786 3041 dbSNP
rs544549210 3042 dbSNP
rs1350961425 3054 dbSNP
rs1302004744 3057 dbSNP
rs141084331 3067 dbSNP
rs1369386120 3070 dbSNP
rs944888113 3077 dbSNP
rs1359393608 3080 dbSNP
rs913379084 3085 dbSNP
rs561776144 3087 dbSNP
rs989024622 3091 dbSNP
rs542283786 3092 dbSNP
rs1437613499 3097 dbSNP
rs1376442118 3108 dbSNP
rs573274179 3113 dbSNP
rs1394653944 3121 dbSNP
rs1312541525 3128 dbSNP
rs1345037714 3128 dbSNP
rs1341430809 3129 dbSNP
rs557996869 3129 dbSNP
rs1316681967 3130 dbSNP
rs981157648 3131 dbSNP
rs926187485 3133 dbSNP
rs1288434098 3135 dbSNP
rs1482437963 3136 dbSNP
rs979158727 3141 dbSNP
rs755720278 3146 dbSNP
rs879474536 3147 dbSNP
rs761928082 3150 dbSNP
rs1173038248 3153 dbSNP
rs1419796364 3154 dbSNP
rs1159859706 3156 dbSNP
rs915592355 3158 dbSNP
rs1465283337 3165 dbSNP
rs1303040837 3176 dbSNP
rs1396802369 3178 dbSNP
rs189757460 3186 dbSNP
rs1191769424 3188 dbSNP
rs1023399276 3190 dbSNP
rs1240085002 3195 dbSNP
rs1454878385 3201 dbSNP
rs1013319371 3202 dbSNP
rs1376737043 3203 dbSNP
rs1241503381 3206 dbSNP
rs960535251 3209 dbSNP
rs991549092 3212 dbSNP
rs1209733802 3214 dbSNP
rs184920636 3220 dbSNP
rs1484126917 3221 dbSNP
rs145516700 3226 dbSNP
rs887740542 3226 dbSNP
rs1180415057 3232 dbSNP
rs1440308610 3232 dbSNP
rs558076228 3238 dbSNP
rs1017258163 3239 dbSNP
rs1349492777 3244 dbSNP
rs1432057907 3252 dbSNP
rs149679852 3254 dbSNP
rs1360485634 3257 dbSNP
rs951198243 3258 dbSNP
rs541597850 3263 dbSNP
rs1220251696 3265 dbSNP
rs900472802 3271 dbSNP
rs774498285 3275 dbSNP
rs998286325 3289 dbSNP
rs899907338 3292 dbSNP
rs568847700 3293 dbSNP
rs1341325891 3298 dbSNP
rs1053249015 3304 dbSNP
rs1218675047 3307 dbSNP
rs1302267019 3312 dbSNP
rs936162842 3313 dbSNP
rs537226794 3321 dbSNP
rs1432940017 3323 dbSNP
rs926247409 3328 dbSNP
rs980746516 3330 dbSNP
rs947766680 3341 dbSNP
rs1018297793 3347 dbSNP
rs1409255596 3351 dbSNP
rs916213171 3352 dbSNP
rs1426833288 3353 dbSNP
rs991918913 3356 dbSNP
rs1011319776 3366 dbSNP
rs114782562 3368 dbSNP
rs1423406166 3375 dbSNP
rs1466434306 3380 dbSNP
rs566450272 3385 dbSNP
rs1348594213 3398 dbSNP
rs1435858582 3398 dbSNP
rs983307415 3400 dbSNP
rs951959545 3403 dbSNP
rs1398436960 3406 dbSNP
rs935544689 3407 dbSNP
rs1216056582 3409 dbSNP
rs375867876 3409 dbSNP
rs1287659198 3424 dbSNP
rs906728132 3426 dbSNP
rs1486448616 3427 dbSNP
rs1256013593 3432 dbSNP
rs1222200411 3434 dbSNP
rs369817548 3436 dbSNP
rs996471402 3437 dbSNP
rs900503039 3438 dbSNP
rs547121610 3440 dbSNP
rs915643474 3441 dbSNP
rs533343624 3445 dbSNP
rs991205116 3447 dbSNP
rs1307385063 3448 dbSNP
rs1405349941 3448 dbSNP
rs1412077956 3448 dbSNP
rs1166072944 3449 dbSNP
rs1008842821 3450 dbSNP
rs200841029 3451 dbSNP
rs1220838579 3458 dbSNP
rs1432643385 3462 dbSNP
rs1282279893 3467 dbSNP
rs1341598067 3469 dbSNP
rs941032188 3478 dbSNP
rs1413101063 3479 dbSNP
rs1293807429 3480 dbSNP
rs371159716 3485 dbSNP
rs1053112787 3490 dbSNP
rs936211150 3491 dbSNP
rs1236134302 3492 dbSNP
rs1472654495 3493 dbSNP
rs1182982756 3498 dbSNP
rs909511776 3501 dbSNP
rs1357631881 3506 dbSNP
rs1158053133 3507 dbSNP
rs1361240302 3513 dbSNP
rs1402709832 3520 dbSNP
rs1332400488 3522 dbSNP
rs745621547 3524 dbSNP
rs1358395798 3527 dbSNP
rs1448423690 3529 dbSNP
rs768869184 3536 dbSNP
rs770582702 3540 dbSNP
rs34165263 3542 dbSNP
rs749138047 3546 dbSNP
rs1441622574 3549 dbSNP
rs976566367 3552 dbSNP
rs570750506 3559 dbSNP
rs1277425577 3560 dbSNP
rs1352669828 3561 dbSNP
rs1204643019 3565 dbSNP
rs964197292 3567 dbSNP
rs1456874717 3568 dbSNP
rs139513741 3572 dbSNP
rs1416807949 3575 dbSNP
rs1010954897 3579 dbSNP
rs1475955743 3582 dbSNP
rs1414827694 3586 dbSNP
rs1424650922 3586 dbSNP
rs991863590 3586 dbSNP
rs1338531824 3592 dbSNP
rs1397828224 3593 dbSNP
rs938981437 3600 dbSNP
rs907654251 3601 dbSNP
rs983579132 3616 dbSNP
rs893799717 3624 dbSNP
rs951930615 3625 dbSNP
rs1479399232 3627 dbSNP
rs1231669389 3630 dbSNP
rs1201001684 3636 dbSNP
rs531133700 3641 dbSNP
rs1198603968 3643 dbSNP
rs1251809326 3644 dbSNP
rs1272896578 3649 dbSNP
rs1030936357 3654 dbSNP
rs1196762331 3654 dbSNP
rs1231882415 3656 dbSNP
rs1323702144 3663 dbSNP
rs1715080 3667 dbSNP
rs965021449 3669 dbSNP
rs1464876802 3675 dbSNP
rs1018813146 3679 dbSNP
rs1398474919 3680 dbSNP
rs1384575619 3683 dbSNP
rs1371361417 3684 dbSNP
rs1331166627 3685 dbSNP
rs1406443952 3687 dbSNP
rs373443297 3690 dbSNP
rs777082671 3690 dbSNP
rs147377568 3708 dbSNP
rs778752101 3710 dbSNP
rs1252408641 3712 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B HITS-CLIP data was present in Chi_ControlB_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000344157.4 | 3UTR | AAAAGAACAACACAGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000344157.4 | 3UTR | AAAAGAACAACACAGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset Chi_ControlB_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control B
Location of target site ENST00000344157.4 | 3UTR | AAAAGAACAACACAGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
71 hsa-miR-7156-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT071889 BTF3L4 basic transcription factor 3 like 4 2 2
MIRT089448 STAMBP STAM binding protein 2 2
MIRT135061 ADSS adenylosuccinate synthase 2 4
MIRT279713 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 4
MIRT314693 TMEM167A transmembrane protein 167A 2 2
MIRT405292 ARF1 ADP ribosylation factor 1 2 2
MIRT449941 IGF1 insulin like growth factor 1 2 2
MIRT450241 TRIM66 tripartite motif containing 66 2 2
MIRT450266 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT450683 RPN2 ribophorin II 2 2
MIRT465595 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT479853 CCDC6 coiled-coil domain containing 6 2 2
MIRT487158 IFRD1 interferon related developmental regulator 1 2 6
MIRT506338 NUP54 nucleoporin 54 2 4
MIRT514596 NDUFA12 NADH:ubiquinone oxidoreductase subunit A12 2 4
MIRT525340 TUBGCP4 tubulin gamma complex associated protein 4 2 2
MIRT528088 UCHL3 ubiquitin C-terminal hydrolase L3 2 2
MIRT529251 TRIM4 tripartite motif containing 4 2 4
MIRT552786 YAF2 YY1 associated factor 2 2 2
MIRT554463 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT557667 GATA6 GATA binding protein 6 2 2
MIRT565808 SDCCAG3 serologically defined colon cancer antigen 3 2 2
MIRT566342 POLDIP2 DNA polymerase delta interacting protein 2 2 2
MIRT567793 DEK DEK proto-oncogene 2 2
MIRT572456 ZNF516 zinc finger protein 516 2 2
MIRT572583 HGFAC HGF activator 2 2
MIRT574650 LMAN2 lectin, mannose binding 2 2 2
MIRT608165 ERBB2 erb-b2 receptor tyrosine kinase 2 2 2
MIRT612019 PAK6 p21 (RAC1) activated kinase 6 2 8
MIRT616033 SCO1 SCO1, cytochrome c oxidase assembly protein 2 2
MIRT621925 SYAP1 synapse associated protein 1 2 4
MIRT624611 B3GALT5 beta-1,3-galactosyltransferase 5 2 2
MIRT635086 AKIRIN1 akirin 1 2 2
MIRT636154 TRPS1 transcriptional repressor GATA binding 1 2 2
MIRT638256 SIX1 SIX homeobox 1 2 2
MIRT638485 NNT nicotinamide nucleotide transhydrogenase 2 2
MIRT639396 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT641787 USP32 ubiquitin specific peptidase 32 2 2
MIRT642300 FPR1 formyl peptide receptor 1 2 2
MIRT644555 SPOP speckle type BTB/POZ protein 2 2
MIRT645901 LRIF1 ligand dependent nuclear receptor interacting factor 1 2 2
MIRT657250 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT659907 CACNG2 calcium voltage-gated channel auxiliary subunit gamma 2 2 2
MIRT665371 XIAP X-linked inhibitor of apoptosis 2 2
MIRT667268 NAV1 neuron navigator 1 2 2
MIRT669215 CAND1 cullin associated and neddylation dissociated 1 2 2
MIRT674142 ZNF793 zinc finger protein 793 2 2
MIRT698726 STX6 syntaxin 6 2 4
MIRT699789 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT700291 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT710005 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT710408 YTHDC1 YTH domain containing 1 2 2
MIRT710570 TNPO1 transportin 1 2 2
MIRT711055 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT711281 PSME3 proteasome activator subunit 3 2 2
MIRT711385 PLEKHG4B pleckstrin homology and RhoGEF domain containing G4B 2 2
MIRT712718 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713289 ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif 20 2 2
MIRT715650 USP6NL USP6 N-terminal like 2 2
MIRT716168 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT716757 TRABD2A TraB domain containing 2A 2 2
MIRT718362 SOX1 SRY-box 1 2 2
MIRT719672 SPDYE1 speedy/RINGO cell cycle regulator family member E1 2 2
MIRT720828 C1orf52 chromosome 1 open reading frame 52 2 2
MIRT722185 DNAJC9 DnaJ heat shock protein family (Hsp40) member C9 2 2
MIRT722400 BCAS2 BCAS2, pre-mRNA processing factor 2 2
MIRT723461 ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 2 2
MIRT724073 NCKAP1L NCK associated protein 1 like 2 2
MIRT724595 AP3B1 adaptor related protein complex 3 beta 1 subunit 2 2
MIRT725235 PDE1B phosphodiesterase 1B 2 2
MIRT725585 CDH7 cadherin 7 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-7156 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-7156-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-7156-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-7156-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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