pre-miRNA Information
pre-miRNA hsa-mir-4436b-1   
Genomic Coordinates chr2: 110086433 - 110086523
Description Homo sapiens miR-4436b-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-4436b-2   
Genomic Coordinates chr2: 110284853 - 110284943
Description Homo sapiens miR-4436b-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4436b-3p
Sequence 60| CAGGGCAGGAAGAAGUGGACAA |81
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs760150076 9 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CDH5   
Synonyms 7B4, CD144
Description cadherin 5
Transcript NM_001795   
Expression
Putative miRNA Targets on CDH5
3'UTR of CDH5
(miRNA target sites are highlighted)
>CDH5|NM_001795|3'UTR
   1 GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCA
  81 AAAATGGCAGTGACTCCCCAGCCCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
 161 AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTGGCAAATCCAGGCTGGTGTTCTGTCTG
 241 GGCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGACTTCCTCTGGCTCCCCAAGGCTGCAA
 321 AGCAAAACAGACTGTGTTTAACTGCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTCCTG
 401 GTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGA
 481 CTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCATACTCCACTCCAAGTGCCCCACCACTCCCCAA
 561 CCCCTCTCCAGGCCTGTCAAGAGGGAGGAAGGGGCCCCATGGCAGCTCCTGACCTTGGGTCCTGAAGTGACCTCACTGGC
 641 CTGCCATGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTATTAAACTTTGAAGCAACTGTG
 721 AATTCATTCTGGAGGGGCAGTGGAGATCAGGAGTGACAGATCACAGGGTGAGGGCCACCTCCACACCCACCCCCTCTGGA
 801 GAAGGCCTGGAAGAGCTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGGGCAGATGTTCC
 881 CGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTCTACTCCTTA
 961 TCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGG
1041 AGCCGAGCCATGTGTCTTTACACCTCGCTGTTGTCACATCTCAGGGAACTGACCCTCAGGCACACCTTGCAGAAGGCAAG
1121 GCCCTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTG
1201 GCATCAGTCAACAGAGAGGGGCAGGGAAGGAGACACCAAGCTCACCCTTCGTCATGGACCGAGGTTCCCACTCTGGGCAA
1281 AGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTTAACCAATAACTAGCTTCTTATAATGATTTTT
1361 TTACTAATGATACTTACAAGTTTCTAGCTCTCACAGACATATAGAATAAGGGTTTTTGCATAATAAGCAGGTTGTTATTT
1441 AGGTTAACAATATTAATTCAGGTTTTTTAGTTGGAAAAACAATTCCTGTAACCTTCTATTTTCTATAATTGTAGTAATTG
1521 CTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTACTGTATTTTTTTATACCTAAATAAAGAAAAAT
1601 CTTTAGCCTGGGCAACAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aacaggugaagaaGGACGGGAc 5'
                       |||||||| 
Target 5' cagaaggcaaggcCCTGCCCTg 3'
1110 - 1131 145.00 -18.20
2
miRNA  3' aacAGGUGAAGAAGGACGGGac 5'
             ||| |||||  |||||:  
Target 5' gtcTCCCCTTCT--CTGCCTca 3'
894 - 913 131.00 -15.00
3
miRNA  3' aacaggUGA--AGAAGGACGGGAc 5'
                |||   | || |||||| 
Target 5' agggagACTGACCATCATGCCCTc 3'
474 - 497 122.00 -10.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN13681059 3 COSMIC
COSN19751528 4 COSMIC
COSN30120119 5 COSMIC
COSN24314042 20 COSMIC
COSN15663050 60 COSMIC
COSN9440387 62 COSMIC
COSN30132258 130 COSMIC
COSN21126708 186 COSMIC
COSN17695663 269 COSMIC
COSN31961217 290 COSMIC
COSN31541554 543 COSMIC
COSN1189418 557 COSMIC
COSN8601871 659 COSMIC
COSN5836492 821 COSMIC
COSN22078098 830 COSMIC
COSN31484405 863 COSMIC
COSN20229766 883 COSMIC
COSN2487614 892 COSMIC
COSN6092115 963 COSMIC
COSN31537040 1030 COSMIC
COSN8601872 1046 COSMIC
COSN31588880 1055 COSMIC
COSN31529661 1081 COSMIC
COSN31571913 1181 COSMIC
COSN6092116 1372 COSMIC
COSN16518246 1565 COSMIC
COSN6092117 1567 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs904977153 2 dbSNP
rs1267148293 3 dbSNP
rs1489491177 4 dbSNP
rs752514304 6 dbSNP
rs762899353 7 dbSNP
rs764121211 8 dbSNP
rs751546427 10 dbSNP
rs1369177802 11 dbSNP
rs1423875855 15 dbSNP
rs756771482 17 dbSNP
rs780778815 20 dbSNP
rs1003284260 21 dbSNP
rs1288129895 23 dbSNP
rs750004279 27 dbSNP
rs1397457007 29 dbSNP
rs1324349632 32 dbSNP
rs755761449 36 dbSNP
rs779625184 37 dbSNP
rs749644512 38 dbSNP
rs768449321 43 dbSNP
rs1356543720 47 dbSNP
rs1063438 60 dbSNP
rs1334684325 61 dbSNP
rs1063439 62 dbSNP
rs1179517417 64 dbSNP
rs538904151 67 dbSNP
rs1471852200 71 dbSNP
rs1477590559 77 dbSNP
rs1371569214 87 dbSNP
rs1189967886 89 dbSNP
rs1041002397 90 dbSNP
rs552236742 91 dbSNP
rs1424827253 92 dbSNP
rs1256050137 94 dbSNP
rs1183618096 110 dbSNP
rs1020512749 117 dbSNP
rs1414611902 120 dbSNP
rs1336972970 124 dbSNP
rs1266912646 133 dbSNP
rs760832252 135 dbSNP
rs901063549 137 dbSNP
rs1312793985 142 dbSNP
rs932318579 151 dbSNP
rs1377583449 154 dbSNP
rs1169836300 164 dbSNP
rs1409455276 166 dbSNP
rs968718031 179 dbSNP
rs1165276462 189 dbSNP
rs1458711499 193 dbSNP
rs1385044830 195 dbSNP
rs148801037 198 dbSNP
rs1442030013 200 dbSNP
rs1239329000 204 dbSNP
rs1466953969 211 dbSNP
rs1435633865 222 dbSNP
rs534822829 225 dbSNP
rs904303581 236 dbSNP
rs1355246353 243 dbSNP
rs999933828 244 dbSNP
rs953615825 255 dbSNP
rs1354245146 256 dbSNP
rs1445336970 257 dbSNP
rs987565524 260 dbSNP
rs1032493309 264 dbSNP
rs1441545893 265 dbSNP
rs892651210 271 dbSNP
rs972404901 278 dbSNP
rs187704010 279 dbSNP
rs1421390085 281 dbSNP
rs1025189070 282 dbSNP
rs1381460922 284 dbSNP
rs1158547301 296 dbSNP
rs1468131133 298 dbSNP
rs1247906212 299 dbSNP
rs1198982983 300 dbSNP
rs141512829 319 dbSNP
rs1218512140 332 dbSNP
rs939139143 335 dbSNP
rs1285190326 343 dbSNP
rs1002654186 349 dbSNP
rs1056175651 351 dbSNP
rs1347072164 352 dbSNP
rs895978707 353 dbSNP
rs1234067095 358 dbSNP
rs1345118235 366 dbSNP
rs192437171 369 dbSNP
rs150885326 375 dbSNP
rs904799727 376 dbSNP
rs1318112045 377 dbSNP
rs1278206317 387 dbSNP
rs984204012 396 dbSNP
rs1427884555 398 dbSNP
rs184467625 404 dbSNP
rs1479862525 416 dbSNP
rs1426751880 421 dbSNP
rs1212508919 424 dbSNP
rs1029031464 428 dbSNP
rs1238164236 431 dbSNP
rs1241261364 437 dbSNP
rs1213406043 441 dbSNP
rs1444006665 443 dbSNP
rs1279334180 449 dbSNP
rs953401258 449 dbSNP
rs1192894365 453 dbSNP
rs766586073 455 dbSNP
rs1019001097 467 dbSNP
rs753901691 472 dbSNP
rs1478687021 477 dbSNP
rs1168337981 479 dbSNP
rs1424196149 487 dbSNP
rs139974652 492 dbSNP
rs1335752023 502 dbSNP
rs1375549153 503 dbSNP
rs367886036 513 dbSNP
rs765898628 514 dbSNP
rs1296895479 519 dbSNP
rs1172229508 521 dbSNP
rs1342873706 525 dbSNP
rs932583623 529 dbSNP
rs1049888326 534 dbSNP
rs925621519 535 dbSNP
rs935639209 540 dbSNP
rs1027433964 543 dbSNP
rs189764487 545 dbSNP
rs541248962 549 dbSNP
rs1182958745 551 dbSNP
rs1221203224 552 dbSNP
rs1261285837 554 dbSNP
rs891512326 564 dbSNP
rs1213165070 570 dbSNP
rs1308232064 570 dbSNP
rs1381857000 576 dbSNP
rs1488006040 581 dbSNP
rs1452493417 584 dbSNP
rs1381251675 586 dbSNP
rs1332722177 595 dbSNP
rs926295837 599 dbSNP
rs1465690847 604 dbSNP
rs1009693189 612 dbSNP
rs1167949102 625 dbSNP
rs1214468629 628 dbSNP
rs1265408415 637 dbSNP
rs1489267660 641 dbSNP
rs1046546199 644 dbSNP
rs906812287 653 dbSNP
rs1182783239 662 dbSNP
rs1193768453 667 dbSNP
rs1002447293 675 dbSNP
rs1034121083 682 dbSNP
rs952762086 696 dbSNP
rs992328692 700 dbSNP
rs913625898 706 dbSNP
rs1174004036 719 dbSNP
rs1232494013 734 dbSNP
rs372905538 745 dbSNP
rs181130817 751 dbSNP
rs752255778 754 dbSNP
rs1292893962 760 dbSNP
rs1245715597 763 dbSNP
rs1357836150 764 dbSNP
rs1156369431 771 dbSNP
rs1041936984 773 dbSNP
rs904683582 783 dbSNP
rs961415688 787 dbSNP
rs936276285 791 dbSNP
rs1383310424 793 dbSNP
rs530194233 794 dbSNP
rs1162623636 795 dbSNP
rs1323453816 802 dbSNP
rs1329734760 804 dbSNP
rs1382079582 805 dbSNP
rs553864364 811 dbSNP
rs889129386 814 dbSNP
rs1008876789 815 dbSNP
rs1175576115 819 dbSNP
rs1489552716 820 dbSNP
rs1019345702 824 dbSNP
rs922455645 835 dbSNP
rs1489976936 863 dbSNP
rs563698048 876 dbSNP
rs954119872 877 dbSNP
rs532443071 882 dbSNP
rs552461482 883 dbSNP
rs1238239818 894 dbSNP
rs993537406 895 dbSNP
rs1402846336 896 dbSNP
rs1362264351 901 dbSNP
rs1298613712 911 dbSNP
rs1452903946 921 dbSNP
rs145491534 922 dbSNP
rs951845174 926 dbSNP
rs1205664921 927 dbSNP
rs1430222184 928 dbSNP
rs1052679076 931 dbSNP
rs778294361 945 dbSNP
rs751901824 948 dbSNP
rs1206106750 955 dbSNP
rs1485789228 956 dbSNP
rs1259555198 961 dbSNP
rs1449661304 963 dbSNP
rs1195205532 968 dbSNP
rs1033571029 984 dbSNP
rs528270164 988 dbSNP
rs913022640 992 dbSNP
rs1342013727 1015 dbSNP
rs1295952678 1016 dbSNP
rs1381440520 1026 dbSNP
rs573630761 1027 dbSNP
rs756901112 1033 dbSNP
rs140666675 1037 dbSNP
rs144642224 1039 dbSNP
rs184557983 1040 dbSNP
rs145600777 1045 dbSNP
rs574926798 1046 dbSNP
rs926112121 1051 dbSNP
rs1194345177 1057 dbSNP
rs1389133104 1059 dbSNP
rs1260230247 1068 dbSNP
rs936126256 1076 dbSNP
rs1005560106 1094 dbSNP
rs1201240810 1103 dbSNP
rs1319475639 1117 dbSNP
rs1251594466 1121 dbSNP
rs1015602809 1129 dbSNP
rs539063751 1145 dbSNP
rs897280544 1148 dbSNP
rs558797299 1152 dbSNP
rs1453231165 1153 dbSNP
rs779476404 1154 dbSNP
rs1327070925 1169 dbSNP
rs1381966428 1171 dbSNP
rs572420677 1172 dbSNP
rs944940958 1181 dbSNP
rs1398894642 1186 dbSNP
rs1168764054 1197 dbSNP
rs1444901112 1199 dbSNP
rs1461769329 1204 dbSNP
rs1311671081 1209 dbSNP
rs1167379041 1212 dbSNP
rs998250466 1230 dbSNP
rs555898643 1232 dbSNP
rs148912631 1236 dbSNP
rs1243073464 1242 dbSNP
rs554721696 1248 dbSNP
rs113703751 1252 dbSNP
rs1354237312 1257 dbSNP
rs768534050 1261 dbSNP
rs774165683 1262 dbSNP
rs1001968187 1265 dbSNP
rs1033909874 1278 dbSNP
rs1246450502 1280 dbSNP
rs1457139144 1291 dbSNP
rs747941017 1295 dbSNP
rs1312910237 1300 dbSNP
rs1196395014 1301 dbSNP
rs188971595 1313 dbSNP
rs912885303 1319 dbSNP
rs1252179694 1323 dbSNP
rs1337650817 1328 dbSNP
rs1329656328 1342 dbSNP
rs1390990497 1351 dbSNP
rs112349697 1356 dbSNP
rs1305264262 1356 dbSNP
rs552884919 1356 dbSNP
rs960682713 1365 dbSNP
rs1385140753 1367 dbSNP
rs981175493 1369 dbSNP
rs1471461207 1371 dbSNP
rs113926758 1372 dbSNP
rs938201931 1378 dbSNP
rs1020657458 1396 dbSNP
rs1269105493 1400 dbSNP
rs1490139480 1401 dbSNP
rs771104392 1403 dbSNP
rs1419167535 1405 dbSNP
rs756964371 1411 dbSNP
rs1351338158 1420 dbSNP
rs925001765 1421 dbSNP
rs779202411 1432 dbSNP
rs1366196505 1438 dbSNP
rs117426690 1439 dbSNP
rs532491716 1448 dbSNP
rs1166253665 1449 dbSNP
rs1285490935 1450 dbSNP
rs986345209 1452 dbSNP
rs1365385812 1454 dbSNP
rs7499268 1462 dbSNP
rs1037065499 1463 dbSNP
rs1464352003 1486 dbSNP
rs945019779 1494 dbSNP
rs546243716 1495 dbSNP
rs150993787 1496 dbSNP
rs1397411518 1506 dbSNP
rs1157483292 1507 dbSNP
rs1468207633 1519 dbSNP
rs759598319 1523 dbSNP
rs528370372 1537 dbSNP
rs998157056 1540 dbSNP
rs765410799 1545 dbSNP
rs772325106 1556 dbSNP
rs1266444654 1558 dbSNP
rs548546898 1560 dbSNP
rs1217691994 1569 dbSNP
rs1447443295 1572 dbSNP
rs1342313206 1574 dbSNP
rs775653137 1582 dbSNP
rs565170133 1585 dbSNP
rs775499299 1586 dbSNP
rs1235113793 1591 dbSNP
rs1285394340 1595 dbSNP
rs887883536 1596 dbSNP
rs889827933 1598 dbSNP
rs1293780523 1607 dbSNP
rs1055000762 1612 dbSNP
rs1317104172 1616 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_ControlB_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aacaggugaagaaggaCGGGAc 5'
                          ||||| 
Target 5' ---ugcagaaggcaagGCCCU- 3'
1 - 18
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_ControlB_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control B
Location of target site ENST00000341529.3 | 3UTR | UGCAGAAGGCAAGGCCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
87 hsa-miR-4436b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066957 ATXN7L3B ataxin 7 like 3B 2 8
MIRT119284 NABP1 nucleic acid binding protein 1 2 6
MIRT128915 KMT2A lysine methyltransferase 2A 2 2
MIRT150116 MIDN midnolin 2 2
MIRT173040 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT253117 BCL2L12 BCL2 like 12 2 2
MIRT256997 RGMB repulsive guidance molecule family member b 2 2
MIRT259746 SNX12 sorting nexin 12 2 2
MIRT267278 TMEM109 transmembrane protein 109 2 2
MIRT441934 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT443625 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT445757 AGO1 argonaute 1, RISC catalytic component 2 2
MIRT447835 CTIF cap binding complex dependent translation initiation factor 2 2
MIRT451230 ZNF444 zinc finger protein 444 2 2
MIRT451966 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT453127 HOXC4 homeobox C4 2 2
MIRT454604 RPL13A ribosomal protein L13a 2 2
MIRT455176 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455547 GJB1 gap junction protein beta 1 2 2
MIRT458197 ATP6V0A2 ATPase H+ transporting V0 subunit a2 2 2
MIRT458356 NOC2L NOC2 like nucleolar associated transcriptional repressor 2 2
MIRT458923 DNM2 dynamin 2 2 2
MIRT461013 SYT7 synaptotagmin 7 2 2
MIRT461643 ZSWIM4 zinc finger SWIM-type containing 4 2 2
MIRT461997 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT462367 BCL7B BCL tumor suppressor 7B 2 2
MIRT464915 TXNIP thioredoxin interacting protein 2 2
MIRT466311 TIMM22 translocase of inner mitochondrial membrane 22 2 2
MIRT466591 TBC1D2B TBC1 domain family member 2B 2 2
MIRT467045 SRSF1 serine and arginine rich splicing factor 1 2 2
MIRT468750 SDC2 syndecan 2 2 2
MIRT468943 RPS24 ribosomal protein S24 2 2
MIRT469474 REEP5 receptor accessory protein 5 2 2
MIRT469913 PTRF caveolae associated protein 1 2 2
MIRT473325 MEX3A mex-3 RNA binding family member A 2 2
MIRT473643 MARK2 microtubule affinity regulating kinase 2 2 2
MIRT474064 LMNB2 lamin B2 2 2
MIRT474357 KMT2D lysine methyltransferase 2D 2 2
MIRT475394 ICMT isoprenylcysteine carboxyl methyltransferase 2 4
MIRT476335 GLTSCR1L BRD4 interacting chromatin remodeling complex associated protein like 2 2
MIRT478651 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT479585 CDC42SE1 CDC42 small effector 1 2 2
MIRT479943 CBX5 chromobox 5 2 2
MIRT482001 AMOTL2 angiomotin like 2 2 2
MIRT482043 AMER1 APC membrane recruitment protein 1 2 2
MIRT483070 EXT2 exostosin glycosyltransferase 2 2 6
MIRT484323 KCNH1 potassium voltage-gated channel subfamily H member 1 2 4
MIRT487528 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT489636 ALS2CL ALS2 C-terminal like 2 2
MIRT490693 SSTR1 somatostatin receptor 1 2 2
MIRT490871 UPK2 uroplakin 2 2 2
MIRT492582 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT492945 NEUROD2 neuronal differentiation 2 2 2
MIRT498675 SOD2 superoxide dismutase 2 2 4
MIRT499349 RAB25 RAB25, member RAS oncogene family 2 2
MIRT502338 GIGYF1 GRB10 interacting GYF protein 1 2 4
MIRT502976 CCNL1 cyclin L1 2 8
MIRT503706 NUP62 nucleoporin 62 2 2
MIRT505567 SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 2 2
MIRT507808 CDKN1B cyclin dependent kinase inhibitor 1B 2 2
MIRT513242 FBXO41 F-box protein 41 2 6
MIRT513586 EVX1 even-skipped homeobox 1 2 2
MIRT525036 FRK fyn related Src family tyrosine kinase 2 2
MIRT531035 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT531939 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT534912 PUM2 pumilio RNA binding family member 2 2 2
MIRT535717 N4BP1 NEDD4 binding protein 1 2 2
MIRT540498 ZMAT4 zinc finger matrin-type 4 2 4
MIRT541465 AURKA aurora kinase A 2 2
MIRT554328 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT561572 SLC6A9 solute carrier family 6 member 9 2 2
MIRT564715 ZNF322P1 zinc finger protein 322 pseudogene 1 2 2
MIRT576176 Hmox1 heme oxygenase 1 2 2
MIRT629712 XKR4 XK related 4 2 2
MIRT636182 THBD thrombomodulin 2 2
MIRT646315 MPHOSPH8 M-phase phosphoprotein 8 2 2
MIRT649174 IQSEC1 IQ motif and Sec7 domain 1 2 2
MIRT666945 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT684057 FOLR1 folate receptor 1 2 2
MIRT687585 MAU2 MAU2 sister chromatid cohesion factor 2 2
MIRT689953 ZNF185 zinc finger protein 185 with LIM domain 2 2
MIRT704071 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT704327 DCUN1D5 defective in cullin neddylation 1 domain containing 5 2 2
MIRT705406 ATP1B3 ATPase Na+/K+ transporting subunit beta 3 2 2
MIRT710488 CDH5 cadherin 5 2 2
MIRT718241 LCE1A late cornified envelope 1A 2 2
MIRT723182 CDCA4 cell division cycle associated 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4436b-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-4436b-3p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)

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