pre-miRNA Information
pre-miRNA hsa-mir-3120   
Genomic Coordinates chr1: 172138808 - 172138888
Description Homo sapiens miR-3120 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3120-5p
Sequence 13| CCUGUCUGUGCCUGCUGUACA |33
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 19 1 + 172138838 26449202, 27587585 MiREDiBase
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26637643 8 COSMIC
COSN31603497 11 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs750386761 8 dbSNP
rs760725207 9 dbSNP
rs766486759 10 dbSNP
rs754055278 12 dbSNP
rs755288536 19 dbSNP
rs754726014 21 dbSNP
Putative Targets

Gene Information
Gene Symbol TRAT1   
Synonyms HSPC062, TCRIM, TRIM, pp29/30
Description T-cell receptor associated transmembrane adaptor 1
Transcript NM_016388   
Expression
Putative miRNA Targets on TRAT1
3'UTR of TRAT1
(miRNA target sites are highlighted)
>TRAT1|NM_016388|3'UTR
   1 CTGGACCATGATCTAGTTCAATGATTTGGCTCCTATTGAAGATGGCTTCTAAGAAAACAAGATGCACAGAGGACACAGAA
  81 GGACTTGGCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTATTCACAGCTTACACTTATGC
 161 ATGCCAAATGTAAGGCCATGAAAATCAGTATTTCAAATAACTTAAAAAATGCTTTACTACTAAAATGTAAAAAATTAATG
 241 TGCTCACCTCGGCAGCACATATACTAAAAATTAATAAGACCCAGCTTGAAAATTGAGCCTGATAACAAGATTACAAATTC
 321 ACAATACCTAATACTTAGGGAAATATAAAAATTTAAGCATGAATGTGTTCTGGAACACGTTAGAAGAAAAATAAAAGCCA
 401 ATGAGTTTTTTTTTAATTCTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAAAGGTATAG
 481 GAAACATTAAAATGCATTACTAAGAGAAGTAATATAATTTTCTTACAAAGTATTTTTCCCAAAGATAGCTTTACTATTTC
 561 AAAAATTGTCAAATTAATGCATGCTCCTTACAACAAACAAATATCAAAAAGAGTTTAGGAATTCTACTAGCCAGAGATAG
 641 TCACTTGGAGAAACTTTCTATATATCCTTCTAAATATTTTTCTGGGCATGCTTATGTATGTACATCAGTTGTTTCTTTTT
 721 ATTTTGAACCAAAAATGTGGTTTCTTTTGTACACATTACTTAAACTTTCTTTCCAGTCAACAATATATTGTGGATTTATT
 801 TTCACTGTTATATTTAACTATATATAAATACGCATATATTGTAATTTTAATGTCTGCTTAGCACCCCACTGATAACCAAA
 881 TCACAGTTTATTTAAATAATTTTAATGACTTTTCAAAAACAATTTATTGATGCAAAAAGCAAGGTTGAGATGACAATGTT
 961 TCTTTCAATAATTAAAAAATACTGCTTCACTGTCTTCTCTCTGTTTCATCAGAAACACATACTATAATACTTGTCTCTGT
1041 CCTTAAGTGTGATACACGCTATTTTTCTGATTGTTAAGACTTTCCTTATTACTGGTTCTAATTTGATTATAATATGCCAA
1121 GGTATGGT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acaUGUCGUCCGUGUCUGUCc 5'
             |||| :| |||||| :| 
Target 5' tgcACAGAGGACACAGAAGGa 3'
63 - 83 122.00 -20.30
2
miRNA  3' acAUGUCGUCCGUGUCUGUCc 5'
            | :| :|| || |||:|| 
Target 5' atTCTACTAGCCAGAGATAGt 3'
621 - 641 115.00 -9.60
3
miRNA  3' acaugucguccgugUCUGUCc 5'
                        |||:|| 
Target 5' agtatttttcccaaAGATAGc 3'
529 - 549 104.00 -7.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM6310534 1 COSMIC
COSN30100886 2 COSMIC
COSN30453839 4 COSMIC
COSN28883396 7 COSMIC
COSN14020961 11 COSMIC
COSN31613850 11 COSMIC
COSN30153101 18 COSMIC
COSN31558046 20 COSMIC
COSN30133900 21 COSMIC
COSN30502175 29 COSMIC
COSN30474546 34 COSMIC
COSN30527078 36 COSMIC
COSN31503395 37 COSMIC
COSN30449638 45 COSMIC
COSN30188509 48 COSMIC
COSN31957014 50 COSMIC
COSN30471313 54 COSMIC
COSN21797839 58 COSMIC
COSN30671128 88 COSMIC
COSN31504173 90 COSMIC
COSN30486662 107 COSMIC
COSN30451794 110 COSMIC
COSN31507431 120 COSMIC
COSN5516667 149 COSMIC
COSN30470929 155 COSMIC
COSN31499375 159 COSMIC
COSN31505208 175 COSMIC
COSN31509928 181 COSMIC
COSN31509953 187 COSMIC
COSN1264920 238 COSMIC
COSN15253556 269 COSMIC
COSN19600003 345 COSMIC
COSN513008 415 COSMIC
COSN29418575 524 COSMIC
COSN7551579 542 COSMIC
COSN9110337 803 COSMIC
COSN4809826 808 COSMIC
COSN15927342 833 COSMIC
COSN20327265 858 COSMIC
COSN1905512 1005 COSMIC
COSN21053780 1020 COSMIC
COSN5035268 1117 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs896482314 2 dbSNP
rs532522365 5 dbSNP
rs1238119704 7 dbSNP
rs765928658 11 dbSNP
rs1189793359 12 dbSNP
rs776142898 13 dbSNP
rs759224949 16 dbSNP
rs1168247334 17 dbSNP
rs1284946946 22 dbSNP
rs1020968393 23 dbSNP
rs1463886491 27 dbSNP
rs1169798766 30 dbSNP
rs1406737003 32 dbSNP
rs764994650 33 dbSNP
rs552362011 34 dbSNP
rs758217630 36 dbSNP
rs370604207 37 dbSNP
rs751526988 39 dbSNP
rs756473132 41 dbSNP
rs1217189768 42 dbSNP
rs998775415 46 dbSNP
rs1380931562 48 dbSNP
rs1324963183 53 dbSNP
rs867959361 54 dbSNP
rs1295097487 57 dbSNP
rs1001955127 59 dbSNP
rs559384536 65 dbSNP
rs528582560 66 dbSNP
rs145436136 67 dbSNP
rs1156961716 68 dbSNP
rs1407242587 71 dbSNP
rs1414814455 90 dbSNP
rs1182163212 91 dbSNP
rs1472340293 104 dbSNP
rs957227256 109 dbSNP
rs868486933 114 dbSNP
rs1309802556 115 dbSNP
rs1488600390 117 dbSNP
rs754979465 118 dbSNP
rs1378552842 121 dbSNP
rs568346253 127 dbSNP
rs1284639173 128 dbSNP
rs985876320 133 dbSNP
rs1288755575 134 dbSNP
rs1323091940 135 dbSNP
rs1290160311 154 dbSNP
rs537502360 159 dbSNP
rs1321985158 163 dbSNP
rs1223250839 165 dbSNP
rs960628849 179 dbSNP
rs865962963 190 dbSNP
rs965725712 215 dbSNP
rs1178637475 218 dbSNP
rs976123186 221 dbSNP
rs1438708379 234 dbSNP
rs1350605984 239 dbSNP
rs368454702 241 dbSNP
rs1441676655 243 dbSNP
rs1403862884 244 dbSNP
rs187437223 251 dbSNP
rs950481181 252 dbSNP
rs1478080519 263 dbSNP
rs984536079 271 dbSNP
rs1424635564 273 dbSNP
rs918945801 277 dbSNP
rs1167105740 298 dbSNP
rs569979005 299 dbSNP
rs538805036 303 dbSNP
rs114693947 313 dbSNP
rs1220329747 323 dbSNP
rs1332259552 324 dbSNP
rs1049308153 338 dbSNP
rs1219647156 340 dbSNP
rs1317772615 347 dbSNP
rs755653568 358 dbSNP
rs572298928 364 dbSNP
rs780061769 371 dbSNP
rs1368369529 379 dbSNP
rs540625575 380 dbSNP
rs1055195696 401 dbSNP
rs1465953376 403 dbSNP
rs896535407 404 dbSNP
rs1053560682 406 dbSNP
rs1434874867 406 dbSNP
rs1013690246 407 dbSNP
rs191930741 415 dbSNP
rs1043126878 416 dbSNP
rs1239621824 418 dbSNP
rs868533468 423 dbSNP
rs998767227 436 dbSNP
rs1250025927 465 dbSNP
rs1002006073 468 dbSNP
rs527492571 469 dbSNP
rs1300619866 476 dbSNP
rs892958515 477 dbSNP
rs1379313854 481 dbSNP
rs748298289 481 dbSNP
rs1007832218 482 dbSNP
rs1013495606 485 dbSNP
rs1292992408 492 dbSNP
rs1316503843 495 dbSNP
rs1198384647 501 dbSNP
rs1259313145 509 dbSNP
rs1296267371 512 dbSNP
rs1467474525 515 dbSNP
rs1026438977 528 dbSNP
rs1174663941 529 dbSNP
rs1017449220 532 dbSNP
rs1381687198 538 dbSNP
rs1178841309 542 dbSNP
rs548732796 550 dbSNP
rs778782971 556 dbSNP
rs1248813047 569 dbSNP
rs1236988393 570 dbSNP
rs984420657 585 dbSNP
rs1473126492 586 dbSNP
rs1183883012 587 dbSNP
rs1417613708 592 dbSNP
rs908974132 607 dbSNP
rs1209440558 612 dbSNP
rs879291477 620 dbSNP
rs199635115 624 dbSNP
rs1239639251 627 dbSNP
rs966159980 629 dbSNP
rs975857258 635 dbSNP
rs1397564917 645 dbSNP
rs1379702169 646 dbSNP
rs1425445649 658 dbSNP
rs1312184690 662 dbSNP
rs1432838680 669 dbSNP
rs1026365523 671 dbSNP
rs543408625 676 dbSNP
rs1418666667 680 dbSNP
rs1053373259 683 dbSNP
rs563788262 689 dbSNP
rs372100539 690 dbSNP
rs183265045 691 dbSNP
rs1255976122 693 dbSNP
rs3196446 694 dbSNP
rs909490232 697 dbSNP
rs1449567919 700 dbSNP
rs1489581984 704 dbSNP
rs1286762625 708 dbSNP
rs1286806959 712 dbSNP
rs1043009476 731 dbSNP
rs746630549 739 dbSNP
rs559496510 745 dbSNP
rs1245873653 749 dbSNP
rs1322078323 750 dbSNP
rs938279708 760 dbSNP
rs1412816272 762 dbSNP
rs991372825 770 dbSNP
rs868362203 774 dbSNP
rs1381172784 779 dbSNP
rs1382213588 789 dbSNP
rs1055402750 790 dbSNP
rs187750070 791 dbSNP
rs1217978101 794 dbSNP
rs1368229121 812 dbSNP
rs1278525819 817 dbSNP
rs949465011 818 dbSNP
rs1264552616 822 dbSNP
rs1193652014 825 dbSNP
rs1026237558 826 dbSNP
rs1269612512 828 dbSNP
rs528692814 832 dbSNP
rs568237637 833 dbSNP
rs1272269254 837 dbSNP
rs1488101478 853 dbSNP
rs902515084 855 dbSNP
rs1319835398 861 dbSNP
rs1278748821 867 dbSNP
rs1015916894 874 dbSNP
rs936681545 875 dbSNP
rs1265067768 882 dbSNP
rs779025988 888 dbSNP
rs893029338 890 dbSNP
rs1007492839 909 dbSNP
rs1479332531 920 dbSNP
rs1324238579 921 dbSNP
rs535581724 923 dbSNP
rs2593825 924 dbSNP
rs112014571 926 dbSNP
rs954904726 930 dbSNP
rs1318971141 941 dbSNP
rs997666919 951 dbSNP
rs755151048 959 dbSNP
rs1379395032 969 dbSNP
rs1026058844 975 dbSNP
rs1415721033 980 dbSNP
rs989352362 985 dbSNP
rs777650561 994 dbSNP
rs574471128 995 dbSNP
rs947618103 996 dbSNP
rs978755489 996 dbSNP
rs569275964 998 dbSNP
rs1195131021 1004 dbSNP
rs530774207 1004 dbSNP
rs746140061 1009 dbSNP
rs984448842 1011 dbSNP
rs1276044318 1017 dbSNP
rs1015903254 1022 dbSNP
rs1233362412 1023 dbSNP
rs937460909 1031 dbSNP
rs959578137 1035 dbSNP
rs374110072 1036 dbSNP
rs1448588154 1053 dbSNP
rs550970890 1058 dbSNP
rs918071398 1059 dbSNP
rs6764854 1060 dbSNP
rs141589471 1071 dbSNP
rs375284926 1071 dbSNP
rs1346367894 1079 dbSNP
rs1453856118 1081 dbSNP
rs1393418714 1105 dbSNP
rs978566004 1116 dbSNP
rs1440599061 1123 dbSNP
rs1233191315 1126 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B HITS-CLIP data was present in Chi_ControlB_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000295756.6 | 3UTR | AAAGGAACAAGACAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000295756.6 | 3UTR | AAAGGAACAAGACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset Chi_ControlB_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control B
Location of target site ENST00000295756.6 | 3UTR | AAAGGAACAAGACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
134 hsa-miR-3120-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT096972 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT442624 LOX lysyl oxidase 2 2
MIRT473438 MDM4 MDM4, p53 regulator 2 2
MIRT490011 KIFC2 kinesin family member C2 2 2
MIRT496449 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496752 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT497721 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT498287 PADI3 peptidyl arginine deiminase 3 2 2
MIRT503195 ACVR1B activin A receptor type 1B 2 4
MIRT504760 TEP1 telomerase associated protein 1 2 4
MIRT517810 UGDH UDP-glucose 6-dehydrogenase 2 6
MIRT519686 ZNF622 zinc finger protein 622 2 4
MIRT520263 URGCP upregulator of cell proliferation 2 2
MIRT523051 ICMT isoprenylcysteine carboxyl methyltransferase 2 2
MIRT525601 OLR1 oxidized low density lipoprotein receptor 1 2 4
MIRT526995 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT528699 TRAF3IP2 TRAF3 interacting protein 2 2 4
MIRT533142 WNT10A Wnt family member 10A 2 2
MIRT537618 ERI1 exoribonuclease 1 2 2
MIRT539707 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT539752 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT539808 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT539941 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT540424 FAM83F family with sequence similarity 83 member F 2 2
MIRT540509 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT540720 GUF1 GUF1 homolog, GTPase 2 2
MIRT541630 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT542286 POLR3K RNA polymerase III subunit K 2 2
MIRT542456 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT542550 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542771 PPAP2B phospholipid phosphatase 3 2 2
MIRT550085 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT551458 CARKD NAD(P)HX dehydratase 2 2
MIRT555622 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 2
MIRT569136 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT572328 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT574607 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT575583 Mcm8 minichromosome maintenance 8 homologous recombination repair factor 2 4
MIRT576125 Hrk harakiri, BCL2 interacting protein (contains only BH3 domain) 2 5
MIRT576657 Fam216a family with sequence similarity 216, member A 2 2
MIRT607222 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 4
MIRT607292 CD300E CD300e molecule 2 6
MIRT607746 ANGPT4 angiopoietin 4 2 2
MIRT607905 SPRYD4 SPRY domain containing 4 2 2
MIRT608159 HRK harakiri, BCL2 interacting protein 2 7
MIRT608657 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT609115 ZNF703 zinc finger protein 703 2 6
MIRT610231 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT610870 NUDCD3 NudC domain containing 3 2 2
MIRT611217 MC2R melanocortin 2 receptor 2 2
MIRT614858 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT616966 LMX1A LIM homeobox transcription factor 1 alpha 2 2
MIRT617258 GLIPR1L2 GLI pathogenesis related 1 like 2 2 2
MIRT618009 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT619067 BSND barttin CLCNK type accessory beta subunit 2 4
MIRT619295 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619348 GINM1 glycoprotein integral membrane 1 2 2
MIRT619362 CFHR5 complement factor H related 5 2 2
MIRT619541 PIWIL2 piwi like RNA-mediated gene silencing 2 2 2
MIRT619782 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT619994 NPAP1 nuclear pore associated protein 1 2 2
MIRT621030 CDC14B cell division cycle 14B 2 2
MIRT622033 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622728 PITPNM3 PITPNM family member 3 2 2
MIRT623144 NAV2 neuron navigator 2 2 2
MIRT623600 IPO9 importin 9 2 2
MIRT624608 B3GALT5 beta-1,3-galactosyltransferase 5 2 2
MIRT624905 CTCFL CCCTC-binding factor like 2 2
MIRT625030 SPC24 SPC24, NDC80 kinetochore complex component 2 2
MIRT625688 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 5
MIRT626531 EMCN endomucin 2 2
MIRT627204 ZDHHC20 zinc finger DHHC-type containing 20 2 2
MIRT628033 LSAMP limbic system-associated membrane protein 2 2
MIRT628203 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT631012 LINS lines homolog 1 2 2
MIRT633195 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT633890 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT634023 MOB4 MOB family member 4, phocein 2 2
MIRT634416 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT636866 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT642527 ANKRD9 ankyrin repeat domain 9 2 2
MIRT645408 FAM110A family with sequence similarity 110 member A 2 2
MIRT645635 SYTL4 synaptotagmin like 4 2 2
MIRT646013 TNFAIP8L2 TNF alpha induced protein 8 like 2 2 2
MIRT646686 ASGR2 asialoglycoprotein receptor 2 2 2
MIRT652838 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT655156 PHF21B PHD finger protein 21B 2 2
MIRT658491 EXOC7 exocyst complex component 7 2 2
MIRT659398 CORO2A coronin 2A 2 2
MIRT666825 PRCP prolylcarboxypeptidase 2 2
MIRT666866 POU2F2 POU class 2 homeobox 2 2 2
MIRT668224 GABRA1 gamma-aminobutyric acid type A receptor alpha1 subunit 2 2
MIRT673288 PDE3A phosphodiesterase 3A 2 2
MIRT673878 KLF2 Kruppel like factor 2 2 2
MIRT681721 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT682406 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT684109 MCM10 minichromosome maintenance 10 replication initiation factor 2 2
MIRT684423 TUFT1 tuftelin 1 2 2
MIRT684684 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT686638 TMEM184C transmembrane protein 184C 2 2
MIRT689457 NXN nucleoredoxin 2 2
MIRT689627 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT690773 PLA2G2C phospholipase A2 group IIC 2 2
MIRT690822 SGSM2 small G protein signaling modulator 2 2 2
MIRT693669 MXRA7 matrix remodeling associated 7 2 2
MIRT695553 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT695872 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT698160 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT699933 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT708639 UBE2W ubiquitin conjugating enzyme E2 W 2 2
MIRT710816 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT711242 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT711542 MSH3 mutS homolog 3 2 2
MIRT711749 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT712303 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT712922 RPF2 ribosome production factor 2 homolog 2 2
MIRT714027 SYDE2 synapse defective Rho GTPase homolog 2 2 2
MIRT714768 TERF1 telomeric repeat binding factor 1 2 2
MIRT714844 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715223 NPVF neuropeptide VF precursor 2 2
MIRT716110 GMPS guanine monophosphate synthase 2 2
MIRT716174 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT716383 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT716527 KSR2 kinase suppressor of ras 2 2 2
MIRT716962 P2RY6 pyrimidinergic receptor P2Y6 2 2
MIRT717605 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT717696 PTGS1 prostaglandin-endoperoxide synthase 1 2 2
MIRT721360 ENTHD1 ENTH domain containing 1 2 2
MIRT721381 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721935 RASSF2 Ras association domain family member 2 2 2
MIRT722094 SUSD1 sushi domain containing 1 2 2
MIRT722837 C17orf102 chromosome 17 open reading frame 102 2 2
MIRT722990 TOR1A torsin family 1 member A 2 2
MIRT724174 ABCF2 ATP binding cassette subfamily F member 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3120-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-3120-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-miR-3120-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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