pre-miRNA Information
pre-miRNA hsa-mir-412   
Genomic Coordinates chr14: 101065447 - 101065537
Synonyms MIRN412, hsa-mir-412, MIR412
Description Homo sapiens miR-412 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-412-3p
Sequence 54| ACUUCACCUGGUCCACUAGCCGU |76
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
rs61992671 18 GWAS
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs369997462 1 dbSNP
rs1439693090 7 dbSNP
rs1301668924 11 dbSNP
rs534204576 13 dbSNP
rs775386036 14 dbSNP
rs762832140 15 dbSNP
rs1203323285 16 dbSNP
rs61992671 18 dbSNP
rs1022012324 19 dbSNP
rs1207609936 20 dbSNP
rs139967426 21 dbSNP
rs539487075 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol RNF145   
Synonyms -
Description ring finger protein 145
Transcript NM_144726   
Expression
Putative miRNA Targets on RNF145
3'UTR of RNF145
(miRNA target sites are highlighted)
>RNF145|NM_144726|3'UTR
   1 AGGAGAAGCAGCAGGAATGATGCTTTGATACTCTGGAGGAGAAGTTAACTCAAGATGGAATTCATGTTCTGATTTGAGGA
  81 ATGAAAATGAGATGATCAGGCAGGAAACTGACATTCCAAGGATCTAATCCAGGAAGTACTCTCAGTGGGGACCACCTGCT
 161 TTCATCCCCTGACATTGTGGGAGAAATTTTGCAATGTATGCTAATCAAAATGTATTTATATGTTCTCTGCTGATGTTTTA
 241 TAGAGGTTTGTGAAGAAAATTCAACCTCAGCAACTTCAGAAACTGCCCCTGATACGTGTGAGAGAGAAATAAAATCAGAT
 321 TTTGAGTGTTGAAGGGACTGAGGAAGTGAGGATAAAGAGCATGAGGACAGCATGGAAAGAAGGAGGCAGAAGTGGAACTG
 401 AACTTTCACTCTCCATGGGACAGATCAATCTCATTATCAAGTCTGAATAGCAACCAGCCCTCTCCTCCACCCCGTTTCTC
 481 CTCAGTTAATTGGAGCTCAGTCAGGTGATTATTGAGTCTTGTACAGCACTGAAATGAAATCAAAGATGAAGAAGCATTGA
 561 TTGTATTCAAAGATTGAAGCACGCTCATACTTTGTATGTGCTTTAGGGAAGGGGTGGGTGGGCACTTGGGCCTTGCGGGT
 641 GCATTCATGTAATCTGAGACTCTTGAACTTTATGACGGAGTCTTCAGTATTTTGATGTATATGAAACTTTTGTTAAATAT
 721 GTTGTATACTTCGCTGGCTGTGTGAAGTAAACTAAAACTCTGATGAACACTTTGGAGTCTGCTTTAGTGAAGGAGACCAA
 801 AGTGGGAAGGGCTTTAGGGCACTGATAGAGGCCCTGGGTGTACTTTTCAATCCTGTGTAATGTTTAATTCTTGCAACTGA
 881 ATCAAAACAGTGTTAAATTATGGCAATATTTGCACTTTGGGAATGAGTACATAACTGTATGATCACACTCTGCAAATGCC
 961 ACTTTTAAAGCTGTTAATAGACTTTGCACCTTTTCTTTGACAAGGATGTGTCATATTTAAATTTTTACATTCATCATGGC
1041 TACAGGTAGAACTGGGGAGGGGGGAATGTAATTTTTTATGGGAATTTTGATATGAAAAGAAACTAGTCATTTATTTATAC
1121 AATAGGCTTGGCTCAAAAAGTGTTTTTCAGACCTCGGTATTCCTAATGTGGGATGTGACTTTATTTTATTTTTAGTAGCA
1201 AATTTGGATGTAGACTGACAGACATAGCTGAATGTCTTAATAAATTTAAATTTGAAGATAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugccgAUCACCUGGUCCACUUCa 5'
               ||| || ::  |||||| 
Target 5' ttttaTAGAGGTTT--GTGAAGa 3'
236 - 256 125.00 -9.20
2
miRNA  3' ugccGAUCACCUGGUCCACUUCa 5'
              :| |  |:|:: |||||| 
Target 5' atacTTCGCTGGCTGTGTGAAGt 3'
726 - 748 123.00 -13.40
3
miRNA  3' ugCCGAU---CACCUGGUCCACUUCa 5'
            |||||   || || | || ||:| 
Target 5' atGGCTACAGGTAGAACTGGGGAGGg 3'
1036 - 1061 121.00 -17.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30151748 5 COSMIC
COSN31574822 11 COSMIC
COSN30528035 13 COSMIC
COSN2376012 47 COSMIC
COSN31507278 63 COSMIC
COSN30447682 78 COSMIC
COSN30137129 141 COSMIC
COSN30180108 177 COSMIC
COSN31600445 183 COSMIC
COSN31593279 193 COSMIC
COSN31572049 206 COSMIC
COSN31590858 245 COSMIC
COSN30125542 283 COSMIC
COSN5022342 319 COSMIC
COSN30542151 582 COSMIC
COSN31602524 642 COSMIC
COSN14796844 687 COSMIC
COSN26671617 707 COSMIC
COSN31512999 732 COSMIC
COSN31528684 910 COSMIC
COSN29896382 916 COSMIC
COSN20102138 1067 COSMIC
COSN20091300 1108 COSMIC
COSN22302110 1147 COSMIC
COSN16127867 1155 COSMIC
COSN23016573 1207 COSMIC
COSN26578047 1230 COSMIC
COSN22014168 1238 COSMIC
COSN31521222 1243 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1367465091 3 dbSNP
rs1196783737 4 dbSNP
rs377322846 5 dbSNP
rs777882654 6 dbSNP
rs756065554 8 dbSNP
rs190033816 10 dbSNP
rs1470701317 14 dbSNP
rs1194518685 17 dbSNP
rs767349967 19 dbSNP
rs1197837090 22 dbSNP
rs759174817 23 dbSNP
rs369980680 25 dbSNP
rs1336244610 27 dbSNP
rs765853259 27 dbSNP
rs144378739 29 dbSNP
rs1029367420 30 dbSNP
rs372362287 32 dbSNP
rs762254636 33 dbSNP
rs1344581956 39 dbSNP
rs1281157480 42 dbSNP
rs776984402 44 dbSNP
rs1346060522 45 dbSNP
rs529385459 54 dbSNP
rs533046461 54 dbSNP
rs997370675 56 dbSNP
rs570196718 61 dbSNP
rs550760129 63 dbSNP
rs1200600466 64 dbSNP
rs368357998 65 dbSNP
rs1258966039 69 dbSNP
rs999251468 73 dbSNP
rs905242173 74 dbSNP
rs1046446288 91 dbSNP
rs1479015162 117 dbSNP
rs903564930 120 dbSNP
rs1043474487 121 dbSNP
rs1372792269 122 dbSNP
rs1466718047 132 dbSNP
rs1174441689 141 dbSNP
rs948259868 142 dbSNP
rs1047193202 155 dbSNP
rs530747119 165 dbSNP
rs1312208370 170 dbSNP
rs895297510 173 dbSNP
rs149649515 174 dbSNP
rs1409745201 191 dbSNP
rs1352895507 194 dbSNP
rs920155368 203 dbSNP
rs1233488761 208 dbSNP
rs1040392479 212 dbSNP
rs564984757 216 dbSNP
rs1330991287 220 dbSNP
rs138336941 222 dbSNP
rs1487135507 226 dbSNP
rs184718118 227 dbSNP
rs987150798 230 dbSNP
rs150395518 238 dbSNP
rs1195770416 239 dbSNP
rs773748474 243 dbSNP
rs913658820 248 dbSNP
rs193189948 250 dbSNP
rs909993902 262 dbSNP
rs985562388 273 dbSNP
rs1455253141 277 dbSNP
rs1286949160 279 dbSNP
rs565305375 286 dbSNP
rs958145599 288 dbSNP
rs1305182132 291 dbSNP
rs546628449 291 dbSNP
rs1028813078 295 dbSNP
rs1002554453 298 dbSNP
rs1309317493 303 dbSNP
rs1183364002 317 dbSNP
rs1214307660 324 dbSNP
rs1437866772 329 dbSNP
rs975985353 335 dbSNP
rs1489016133 350 dbSNP
rs1215886215 352 dbSNP
rs1251429350 353 dbSNP
rs969347164 359 dbSNP
rs1179378475 361 dbSNP
rs140516403 366 dbSNP
rs1156875430 380 dbSNP
rs1013558049 383 dbSNP
rs1030631595 393 dbSNP
rs1458232604 395 dbSNP
rs1327665287 399 dbSNP
rs1337457797 401 dbSNP
rs887152922 403 dbSNP
rs1439679961 405 dbSNP
rs772101859 406 dbSNP
rs1331552222 407 dbSNP
rs999181255 409 dbSNP
rs1221511789 413 dbSNP
rs903515480 415 dbSNP
rs188982483 419 dbSNP
rs1235598049 420 dbSNP
rs1011982914 424 dbSNP
rs528604761 428 dbSNP
rs1371817276 430 dbSNP
rs1281738554 433 dbSNP
rs1056620954 440 dbSNP
rs939584936 443 dbSNP
rs1324180159 450 dbSNP
rs1475476458 451 dbSNP
rs898696292 453 dbSNP
rs543565166 462 dbSNP
rs942904488 464 dbSNP
rs1396491661 466 dbSNP
rs578133375 468 dbSNP
rs891404142 469 dbSNP
rs897379795 470 dbSNP
rs1037280889 473 dbSNP
rs1399832985 474 dbSNP
rs1297106143 480 dbSNP
rs1380583208 481 dbSNP
rs1417140793 489 dbSNP
rs138845720 490 dbSNP
rs145079098 498 dbSNP
rs988336347 500 dbSNP
rs750800191 511 dbSNP
rs936499358 521 dbSNP
rs925137203 523 dbSNP
rs572679555 541 dbSNP
rs980642996 550 dbSNP
rs1486665579 558 dbSNP
rs1190016884 562 dbSNP
rs1255229127 563 dbSNP
rs769504002 572 dbSNP
rs921787801 582 dbSNP
rs1245593446 586 dbSNP
rs555783660 593 dbSNP
rs1168264224 594 dbSNP
rs1421296338 598 dbSNP
rs969253790 600 dbSNP
rs1191423710 610 dbSNP
rs975850997 614 dbSNP
rs1253166193 615 dbSNP
rs1208529675 617 dbSNP
rs1435999859 617 dbSNP
rs1315450999 619 dbSNP
rs1355319632 621 dbSNP
rs992085401 623 dbSNP
rs1287010376 630 dbSNP
rs1224792591 632 dbSNP
rs1344479932 636 dbSNP
rs1279547521 637 dbSNP
rs1350147976 640 dbSNP
rs1301327339 641 dbSNP
rs1443124208 647 dbSNP
rs768290137 649 dbSNP
rs1193688511 652 dbSNP
rs1320096893 654 dbSNP
rs1429799786 656 dbSNP
rs951416692 669 dbSNP
rs1455204073 672 dbSNP
rs1025723613 676 dbSNP
rs965841270 677 dbSNP
rs898648954 679 dbSNP
rs748255682 686 dbSNP
rs10035989 687 dbSNP
rs1430369868 696 dbSNP
rs184993952 700 dbSNP
rs1007068687 701 dbSNP
rs977957669 702 dbSNP
rs1232263156 705 dbSNP
rs781082679 708 dbSNP
rs554184493 710 dbSNP
rs1428821981 712 dbSNP
rs1347127946 713 dbSNP
rs1205672594 719 dbSNP
rs867196194 720 dbSNP
rs932971195 726 dbSNP
rs1445072295 727 dbSNP
rs1214738607 732 dbSNP
rs566234240 733 dbSNP
rs1455162934 734 dbSNP
rs1469531196 743 dbSNP
rs1395328941 748 dbSNP
rs543137493 754 dbSNP
rs1393979818 767 dbSNP
rs1187515433 768 dbSNP
rs1012427198 769 dbSNP
rs925074553 771 dbSNP
rs959113134 773 dbSNP
rs570135166 776 dbSNP
rs768981048 778 dbSNP
rs77305452 787 dbSNP
rs947896515 788 dbSNP
rs1003748296 791 dbSNP
rs1397005010 792 dbSNP
rs200934451 799 dbSNP
rs1325419384 806 dbSNP
rs1291758140 810 dbSNP
rs897326392 836 dbSNP
rs1281228560 839 dbSNP
rs1217199709 842 dbSNP
rs1037630877 849 dbSNP
rs1227632606 849 dbSNP
rs1442367608 849 dbSNP
rs1273548568 852 dbSNP
rs1278734446 862 dbSNP
rs537202166 867 dbSNP
rs745683008 870 dbSNP
rs888460208 873 dbSNP
rs757093959 874 dbSNP
rs575936895 878 dbSNP
rs932733003 883 dbSNP
rs1470042115 888 dbSNP
rs1212995460 889 dbSNP
rs1166169677 890 dbSNP
rs1420509131 891 dbSNP
rs1007057490 893 dbSNP
rs1313893413 900 dbSNP
rs1164489130 901 dbSNP
rs1397409789 904 dbSNP
rs891340414 918 dbSNP
rs563714744 921 dbSNP
rs1041105628 927 dbSNP
rs1029902804 929 dbSNP
rs1010521779 937 dbSNP
rs892061608 938 dbSNP
rs1231164161 939 dbSNP
rs1243548664 942 dbSNP
rs140341065 952 dbSNP
rs545697936 952 dbSNP
rs1339649965 953 dbSNP
rs1052506876 955 dbSNP
rs1270242477 960 dbSNP
rs1482416771 965 dbSNP
rs1189316177 970 dbSNP
rs1260148670 973 dbSNP
rs1474440840 980 dbSNP
rs551331124 984 dbSNP
rs1044826085 986 dbSNP
rs577454164 986 dbSNP
rs1374805125 987 dbSNP
rs1395900615 997 dbSNP
rs923760207 1003 dbSNP
rs978427358 1006 dbSNP
rs1313420777 1015 dbSNP
rs781096805 1017 dbSNP
rs1412773527 1019 dbSNP
rs967967282 1029 dbSNP
rs777757530 1031 dbSNP
rs1436093223 1033 dbSNP
rs917770889 1033 dbSNP
rs1375484690 1035 dbSNP
rs914893587 1042 dbSNP
rs1340852817 1048 dbSNP
rs990465184 1057 dbSNP
rs746719379 1059 dbSNP
rs918515903 1060 dbSNP
rs528363707 1061 dbSNP
rs11738949 1064 dbSNP
rs572886497 1065 dbSNP
rs559421143 1066 dbSNP
rs140766998 1070 dbSNP
rs35065327 1070 dbSNP
rs751209680 1070 dbSNP
rs1430623014 1072 dbSNP
rs1191309496 1078 dbSNP
rs1372661039 1090 dbSNP
rs1034807983 1092 dbSNP
rs1454808017 1097 dbSNP
rs1475064042 1100 dbSNP
rs962777585 1104 dbSNP
rs556020771 1108 dbSNP
rs1432756550 1120 dbSNP
rs1256054656 1121 dbSNP
rs1302139402 1122 dbSNP
rs961566361 1126 dbSNP
rs985566923 1136 dbSNP
rs370814302 1151 dbSNP
rs1015744827 1155 dbSNP
rs1006238061 1156 dbSNP
rs528862679 1157 dbSNP
rs888667210 1167 dbSNP
rs563006864 1172 dbSNP
rs1234471776 1175 dbSNP
rs1304954058 1177 dbSNP
rs1346404144 1180 dbSNP
rs11555238 1183 dbSNP
rs11555239 1188 dbSNP
rs1233187368 1193 dbSNP
rs1261757968 1197 dbSNP
rs1487061926 1200 dbSNP
rs758329344 1205 dbSNP
rs1247712504 1209 dbSNP
rs543107534 1212 dbSNP
rs1274008901 1218 dbSNP
rs1029807019 1219 dbSNP
rs1195625552 1220 dbSNP
rs996895359 1222 dbSNP
rs1393369375 1223 dbSNP
rs1432631232 1225 dbSNP
rs1010426897 1234 dbSNP
rs192405513 1245 dbSNP
rs1455209167 1258 dbSNP
rs34723732 1258 dbSNP
rs1286897629 1260 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_ControlB_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugccgaucaccuggucCACUUCa 5'
                          |||||| 
Target 5' --------------uuGUGAAGa 3'
1 - 9
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_ControlB_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control B
Location of target site ENST00000274542.2 | 3UTR | UUGUGAAGAAAAUUCAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
138 hsa-miR-412-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT005780 ACVR1C activin A receptor type 1C 1 1
MIRT062013 YOD1 YOD1 deubiquitinase 2 2
MIRT345112 ATXN7L3 ataxin 7 like 3 2 2
MIRT383735 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT396956 CELF1 CUGBP Elav-like family member 1 2 2
MIRT439280 XIAP X-linked inhibitor of apoptosis 1 1
MIRT439313 VAT1 vesicle amine transport 1 1 1
MIRT439375 TUBA1A tubulin alpha 1a 1 1
MIRT439418 TMOD1 tropomodulin 1 1 1
MIRT439503 SURF4 surfeit 4 1 1
MIRT439563 SON SON DNA binding protein 1 1
MIRT439598 SLC3A2 solute carrier family 3 member 2 1 1
MIRT439670 SETD1B SET domain containing 1B 1 1
MIRT439767 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT439922 PPL periplakin 1 1
MIRT439947 PLEKHA6 pleckstrin homology domain containing A6 1 1
MIRT439952 PLCB4 phospholipase C beta 4 1 1
MIRT439961 PKD1 polycystin 1, transient receptor potential channel interacting 1 1
MIRT440005 PEG3 paternally expressed 3 1 1
MIRT440061 OSBPL8 oxysterol binding protein like 8 1 1
MIRT440166 MYH14 myosin heavy chain 14 1 1
MIRT440276 MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1 1 1
MIRT440437 IPO13 importin 13 1 1
MIRT440441 INTS3 integrator complex subunit 3 1 1
MIRT440448 INS insulin 1 1
MIRT440461 IGF2R insulin like growth factor 2 receptor 1 1
MIRT440472 IARS isoleucyl-tRNA synthetase 1 1
MIRT440530 GUCY1A3 guanylate cyclase 1 soluble subunit alpha 1 1
MIRT440542 GOLGA2 golgin A2 1 1
MIRT440569 GIGYF1 GRB10 interacting GYF protein 1 1 1
MIRT440608 FTSJD2 cap methyltransferase 1 1 1
MIRT440750 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 1 1
MIRT440781 DOT1L DOT1 like histone lysine methyltransferase 1 1
MIRT440804 DNAJA4 DnaJ heat shock protein family (Hsp40) member A4 1 1
MIRT440867 CSDE1 cold shock domain containing E1 1 1
MIRT440890 CPEB4 cytoplasmic polyadenylation element binding protein 4 1 1
MIRT440917 COL1A1 collagen type I alpha 1 chain 1 1
MIRT440967 CDH22 cadherin 22 1 1
MIRT440968 CDH2 cadherin 2 1 1
MIRT441024 CALR calreticulin 1 1
MIRT441278 ACTB actin beta 1 1
MIRT448421 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT462833 BCL3 B-cell CLL/lymphoma 3 2 2
MIRT465062 TSR1 TSR1, ribosome maturation factor 2 2
MIRT476050 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT485318 MZT1 mitotic spindle organizing protein 1 2 4
MIRT493584 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 6
MIRT494567 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497393 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT503250 ZNF257 zinc finger protein 257 2 10
MIRT503656 ZNF138 zinc finger protein 138 2 10
MIRT505882 RNF219 ring finger protein 219 2 2
MIRT507525 DSTN destrin, actin depolymerizing factor 2 4
MIRT510663 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT514682 ZNF701 zinc finger protein 701 2 4
MIRT515370 ZNF208 zinc finger protein 208 2 6
MIRT525237 KCNJ12 potassium voltage-gated channel subfamily J member 12 2 2
MIRT527963 MTAP methylthioadenosine phosphorylase 2 2
MIRT528482 STAMBPL1 STAM binding protein like 1 2 2
MIRT529909 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531558 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT532234 KLF2 Kruppel like factor 2 2 4
MIRT532480 HOXA13 homeobox A13 2 2
MIRT535544 P2RY2 purinergic receptor P2Y2 2 2
MIRT547311 NR1D2 nuclear receptor subfamily 1 group D member 2 2 2
MIRT551795 ZNF117 zinc finger protein 117 2 4
MIRT554939 RAP1A RAP1A, member of RAS oncogene family 2 2
MIRT558171 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT568771 LY6K lymphocyte antigen 6 family member K 2 2
MIRT570766 ZNF99 zinc finger protein 99 2 2
MIRT572405 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT573396 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT610403 RXRB retinoid X receptor beta 2 2
MIRT610886 SCN8A sodium voltage-gated channel alpha subunit 8 2 2
MIRT611197 TMEM105 transmembrane protein 105 2 2
MIRT611244 ZNF550 zinc finger protein 550 2 2
MIRT615669 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 4
MIRT617974 DOCK4 dedicator of cytokinesis 4 2 2
MIRT619150 ZNF326 zinc finger protein 326 2 2
MIRT619608 MKKS McKusick-Kaufman syndrome 2 2
MIRT621053 DGKD diacylglycerol kinase delta 2 2
MIRT623665 HRK harakiri, BCL2 interacting protein 2 2
MIRT624883 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT624939 MARCH2 membrane associated ring-CH-type finger 2 2 2
MIRT634198 TMOD2 tropomodulin 2 2 4
MIRT636727 AGO2 argonaute 2, RISC catalytic component 2 2
MIRT637741 POLR3K RNA polymerase III subunit K 2 2
MIRT638002 ZC3H13 zinc finger CCCH-type containing 13 2 2
MIRT640395 ZNF785 zinc finger protein 785 2 2
MIRT640505 ANTXR1 anthrax toxin receptor 1 2 2
MIRT641293 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT641863 STOML1 stomatin like 1 2 2
MIRT642600 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT642895 CASP1 caspase 1 2 2
MIRT643967 FHL2 four and a half LIM domains 2 2 4
MIRT645237 KCTD12 potassium channel tetramerization domain containing 12 2 2
MIRT646621 CENPL centromere protein L 2 2
MIRT648620 CYB561A3 cytochrome b561 family member A3 2 2
MIRT648908 ZNF551 zinc finger protein 551 2 2
MIRT649439 HIBADH 3-hydroxyisobutyrate dehydrogenase 2 2
MIRT650637 LTF lactotransferrin 2 2
MIRT650971 STARD3NL STARD3 N-terminal like 2 2
MIRT651067 ZNF518B zinc finger protein 518B 2 4
MIRT652384 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT653958 SEPN1 selenoprotein N 2 2
MIRT656885 KIF1C kinesin family member 1C 2 2
MIRT657965 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658080 FOXR2 forkhead box R2 2 2
MIRT662570 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT663089 METTL10 EEF1A lysine methyltransferase 2 2 2
MIRT683705 ZNF195 zinc finger protein 195 2 2
MIRT683835 ZNF682 zinc finger protein 682 2 2
MIRT706811 APOL4 apolipoprotein L4 2 2
MIRT707575 DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 2 2
MIRT708606 ZNF260 zinc finger protein 260 2 2
MIRT708859 TMSB4X thymosin beta 4, X-linked 2 2
MIRT709861 PDIK1L PDLIM1 interacting kinase 1 like 2 2
MIRT709987 RBM41 RNA binding motif protein 41 2 2
MIRT710098 KPNA5 karyopherin subunit alpha 5 2 2
MIRT710211 ENAH ENAH, actin regulator 2 2
MIRT710868 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2 2
MIRT710986 SUSD5 sushi domain containing 5 2 2
MIRT711460 RNF145 ring finger protein 145 2 2
MIRT712302 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT713609 SYTL4 synaptotagmin like 4 2 2
MIRT713789 MAK16 MAK16 homolog 2 2
MIRT715480 MYO9B myosin IXB 2 2
MIRT716328 POU5F1 POU class 5 homeobox 1 2 2
MIRT717252 TMEM246 transmembrane protein 246 2 2
MIRT718077 CLIC5 chloride intracellular channel 5 2 2
MIRT718463 EED embryonic ectoderm development 2 2
MIRT718645 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT718982 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT721078 RPS9 ribosomal protein S9 2 2
MIRT721419 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT721863 CENPJ centromere protein J 2 2
MIRT722492 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT723391 CALN1 calneuron 1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-412 Gemcitabine approved 60750 Northern blot Mz-ChA-1 human cholangiocarcinoma cell lines 16762633 2006 down-regulated
miR-412 Progesterone approved 5994 Microarray Breast cancer 22330642 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-412 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-412 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-412-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (RKO)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (HCT-116)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved sensitive High Anaplastic Thyroid Cancer tissue
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM43)
hsa-miR-412-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-412-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-412-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR1)
hsa-miR-412-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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