pre-miRNA Information
pre-miRNA hsa-mir-6769b   
Genomic Coordinates chr1: 206474803 - 206474864
Description Homo sapiens miR-6769b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6769b-3p
Sequence 42| CCCUCUCUGUCCCACCCAUAG |62
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26671848 9 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs555627187 3 dbSNP
rs782102173 4 dbSNP
rs201952639 7 dbSNP
rs782001154 9 dbSNP
rs1488064450 15 dbSNP
rs782111367 16 dbSNP
rs370859899 18 dbSNP
rs1305197911 19 dbSNP
Putative Targets

Gene Information
Gene Symbol AMOTL2   
Synonyms LCCP
Description angiomotin like 2
Transcript NM_016201   
Expression
Putative miRNA Targets on AMOTL2
3'UTR of AMOTL2
(miRNA target sites are highlighted)
>AMOTL2|NM_016201|3'UTR
   1 AGGAGGTGGTGCTTCAGGACTCTGAGCCATTCTCTCCCCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCG
  81 TCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTCATTCCCATTGACCATCTGGTCCCAGGAGCTCAGGAGGAGGAC
 161 CCCAGGGGAGAGGAGAGCTGTGAGAGCACCGGCACCCCCAGAAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTAT
 241 GGAGAATGAGGATTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAG
 321 CTCCCTCTGCCCTGCCAGTTGTCAGTCAGGCAGGGAGGGAGTGGCTGTGTTGGTTTGGGGAACTAATTTCCACGGACGGC
 401 TGCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTCTGGCTAAGTTTGGTTCCAGCCAACG
 481 TCATCTGCTCTTCAGTTCCTCACTGCCTTCTTGGGATACTAAGACTTGAATTTTTTGGGGACTATTAAGGGTGTTAGTCT
 561 TGGAGAAGACACAGCCTCACCTTCTCACTTGCTGTGGGTGAGGGGCCATTTAAGTGGACTGGGAGACAGTGCGCAGTTTG
 641 TATATAATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCCATGGGCTGTGCTCCCCTCTT
 721 CCTACTGTCAGTTTCTGAAACTTCTGACTGGCCTCCCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTGGATGTTAAAG
 801 CTGCTCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCC
 881 TCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTCATAAACCCTGAGCCAGATGAAATGAGCC
 961 ACCGTGAACAGACATCTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAG
1041 ATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAAGCAGTTGAAAACTAGTTAATGA
1121 GCTACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCA
1201 TGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTGGAATTGGGGTGAAACACCCACATGGCAGCCTGCTAGCAGCAGTGAC
1281 TTTGACTTCTGGTCTTAAAGAGTCCCTCACTTCAGCCCCAGGAGCTATTGGTGGGTTTTAGCAGTTTTGTCTTTACCGTT
1361 TTTAGTTCTCCTTGATTCTTTGTTTTCTTCCTTTATCGTTTTTAGGTTTGGTATGTGTTGTTTTATTTCCATGGTTCCTC
1441 AAGTTTCCTTTTTAAACATTTGCATTTGCTGGACAATTGCAATTTTTTTTAAAAAATTCCCCTACCCCTGTTTAAAGCTG
1521 AAAAATACATTTGGTTCATGTGCATTGTTTACAAAGCAAAAAGAAAAAAGAGGAAAAAAAGGCAAAAAATATTGTGAAAG
1601 AAAAAAAACAACTTAATATATTTTGGATTAATATTTGGTATTTCTTTTAAAGTATTTTTTGTGCTGTGAACATTTTCTGC
1681 CAAAGACCATGATGTGTGTCTGTATGTTTAAGTTATCGTAAATATTTAAAATGTAAACATGGCTGTTTTGTTATGCCACC
1761 CTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTTTAATTAAAAAAAAATAATTAAAAGTGATGTCTTTG
1841 CACAGGTGAGACTTTGCACTGAGGGAAGGGAAAGGGTGAGGATTTTGGGGGGCCACCCAAGTCATAGTCCAATCTCTTCA
1921 AGGACCCAAGATAGAATTTAGGAATTTTGTGAAGCTGCATTAAGGATAGAGTTGGAATGAGGATGTGGCTGGCATTTTTC
2001 CCCTTTCATAGATAACATTTCTTGAAGGCTGGGAGGGGAAGGAGGGCCTGGCAGATGGCAGCCTCCCGAGGTAGGGCTGT
2081 GTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGTTATCCACAGTGGGAGTGGGTGTCCAAAGATGGCTTTATCCTTCCC
2161 CCACTCCTTTTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAGGCACCATGCAGAGGACA
2241 TTCAAGAATGTGCATGTTCTTAGCCACCGCCTCCCTCCTTTGCTGTGACATCACCACTCTTTCCTGATGCTCAGGAAAGC
2321 ATATTGCTCCAATTCAAAATTAAAGAAAGCCATTCTCAGT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gauaccCACCCUGUCUCUCCc 5'
                ||  |:|||:|||| 
Target 5' ttgtcaGTCAGGCAGGGAGGg 3'
339 - 359 139.00 -20.80
2
miRNA  3' gauacCCACCCUG--UCUCUCCc 5'
               || ||| :  :|||||| 
Target 5' cacctGGAGGGTTTGGGAGAGGa 3'
1071 - 1093 134.00 -17.30
3
miRNA  3' gaUACCCACCCUG------UCUCUCCc 5'
            | | |  ||||      :|||||| 
Target 5' tcAGGAGGAGGACCCCAGGGGAGAGGa 3'
148 - 174 129.00 -17.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30509182 9 COSMIC
COSN30495871 31 COSMIC
COSN31581775 59 COSMIC
COSN30523614 70 COSMIC
COSN26965924 80 COSMIC
COSN26841761 86 COSMIC
COSN14498621 87 COSMIC
COSN30451841 98 COSMIC
COSN30509808 123 COSMIC
COSN30510946 126 COSMIC
COSN22168038 134 COSMIC
COSN30176540 161 COSMIC
COSN1267983 171 COSMIC
COSN19238158 368 COSMIC
COSN31577434 522 COSMIC
COSN26639902 542 COSMIC
COSN1267982 553 COSMIC
COSN26565964 606 COSMIC
COSN24034821 746 COSMIC
COSN31596532 785 COSMIC
COSN28744258 932 COSMIC
COSN32056356 1208 COSMIC
COSN8488302 1217 COSMIC
COSN31542948 1368 COSMIC
COSN31595495 1370 COSMIC
COSN1914939 1455 COSMIC
COSN31611227 1482 COSMIC
COSN14034321 1490 COSMIC
COSN14034319 1491 COSMIC
COSN4811286 1498 COSMIC
COSN31593226 1737 COSMIC
COSN31556591 1810 COSMIC
COSN23106719 1811 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs749069936 2 dbSNP
rs770344425 5 dbSNP
rs1281112942 10 dbSNP
rs1221928950 11 dbSNP
rs1437868756 12 dbSNP
rs755736379 14 dbSNP
rs752254423 15 dbSNP
rs746432080 18 dbSNP
rs754385200 19 dbSNP
rs750942114 21 dbSNP
rs757147755 21 dbSNP
rs1287018036 24 dbSNP
rs753843754 25 dbSNP
rs1174026389 26 dbSNP
rs191988589 31 dbSNP
rs1460417088 34 dbSNP
rs781668635 37 dbSNP
rs948250748 38 dbSNP
rs546488524 39 dbSNP
rs142696435 41 dbSNP
rs896993017 42 dbSNP
rs763584864 45 dbSNP
rs760230621 47 dbSNP
rs1306063722 57 dbSNP
rs1238222389 70 dbSNP
rs931355637 71 dbSNP
rs1004982873 74 dbSNP
rs895877119 78 dbSNP
rs1057154295 79 dbSNP
rs937328346 80 dbSNP
rs1191355253 85 dbSNP
rs1381186319 86 dbSNP
rs927604720 87 dbSNP
rs570666973 88 dbSNP
rs918589716 92 dbSNP
rs1467282352 94 dbSNP
rs757748021 95 dbSNP
rs550519624 100 dbSNP
rs947603393 112 dbSNP
rs138691047 128 dbSNP
rs913410936 129 dbSNP
rs965741625 130 dbSNP
rs1360342583 140 dbSNP
rs912510317 144 dbSNP
rs1381991093 149 dbSNP
rs561804085 149 dbSNP
rs557272594 158 dbSNP
rs1342935995 160 dbSNP
rs751786467 161 dbSNP
rs1333433971 163 dbSNP
rs1221890550 165 dbSNP
rs1390142932 171 dbSNP
rs187906853 172 dbSNP
rs1484798169 187 dbSNP
rs985177366 190 dbSNP
rs183281144 191 dbSNP
rs1478752273 196 dbSNP
rs1425052963 198 dbSNP
rs1417291548 200 dbSNP
rs1255977251 210 dbSNP
rs778175841 214 dbSNP
rs111614249 215 dbSNP
rs1011339886 226 dbSNP
rs1289805017 228 dbSNP
rs56874024 231 dbSNP
rs114947994 232 dbSNP
rs1013404928 233 dbSNP
rs1354292086 234 dbSNP
rs1350216039 240 dbSNP
rs1002565060 246 dbSNP
rs575111594 249 dbSNP
rs1489218542 265 dbSNP
rs895928288 278 dbSNP
rs1036177524 279 dbSNP
rs1286590893 280 dbSNP
rs1001584932 284 dbSNP
rs1489127798 287 dbSNP
rs755399517 293 dbSNP
rs547850825 301 dbSNP
rs1012448613 316 dbSNP
rs895319266 321 dbSNP
rs192473335 329 dbSNP
rs1406135758 338 dbSNP
rs1048508114 346 dbSNP
rs1414065527 350 dbSNP
rs1418735129 355 dbSNP
rs1159407709 362 dbSNP
rs1382585897 363 dbSNP
rs931417862 365 dbSNP
rs3732853 367 dbSNP
rs1156653984 368 dbSNP
rs1299800319 369 dbSNP
rs147296812 374 dbSNP
rs1448203639 382 dbSNP
rs1304063874 385 dbSNP
rs3732852 393 dbSNP
rs1222851320 394 dbSNP
rs747507248 398 dbSNP
rs1293756080 401 dbSNP
rs541969387 405 dbSNP
rs76919889 406 dbSNP
rs1442924002 407 dbSNP
rs1212082312 409 dbSNP
rs1231254827 410 dbSNP
rs912353822 413 dbSNP
rs953909575 414 dbSNP
rs985616674 415 dbSNP
rs1382380328 417 dbSNP
rs1453007275 421 dbSNP
rs932384173 428 dbSNP
rs1478433351 434 dbSNP
rs115085348 439 dbSNP
rs1267321111 442 dbSNP
rs989957651 453 dbSNP
rs1446795897 461 dbSNP
rs1445380029 463 dbSNP
rs1331670347 468 dbSNP
rs956047707 479 dbSNP
rs973708907 480 dbSNP
rs7645136 487 dbSNP
rs142305798 495 dbSNP
rs552343234 501 dbSNP
rs1015504551 517 dbSNP
rs74910485 536 dbSNP
rs1272591726 537 dbSNP
rs960822430 539 dbSNP
rs1240331421 541 dbSNP
rs1219397852 544 dbSNP
rs537039496 557 dbSNP
rs182846502 565 dbSNP
rs971123977 578 dbSNP
rs1247657003 591 dbSNP
rs375505675 603 dbSNP
rs761167851 605 dbSNP
rs138219569 607 dbSNP
rs773895703 609 dbSNP
rs1170761964 614 dbSNP
rs528152583 619 dbSNP
rs532787018 621 dbSNP
rs746358281 622 dbSNP
rs995721105 624 dbSNP
rs897309362 628 dbSNP
rs1037159427 629 dbSNP
rs781771238 632 dbSNP
rs565795651 633 dbSNP
rs1021599819 635 dbSNP
rs1324622305 637 dbSNP
rs1361178186 644 dbSNP
rs1219386253 647 dbSNP
rs547187552 647 dbSNP
rs1049728964 656 dbSNP
rs1053296676 659 dbSNP
rs1290836033 662 dbSNP
rs1453729089 663 dbSNP
rs1191487544 677 dbSNP
rs1242108158 678 dbSNP
rs1478443092 681 dbSNP
rs932573320 689 dbSNP
rs914514801 692 dbSNP
rs1049892396 699 dbSNP
rs932409918 701 dbSNP
rs1131932 713 dbSNP
rs1390962639 723 dbSNP
rs1406942681 724 dbSNP
rs147229516 732 dbSNP
rs1359592879 742 dbSNP
rs1400535974 748 dbSNP
rs747382688 753 dbSNP
rs934545696 758 dbSNP
rs973761097 763 dbSNP
rs370658188 765 dbSNP
rs1244121581 768 dbSNP
rs1285078502 771 dbSNP
rs1452802883 774 dbSNP
rs1252668911 775 dbSNP
rs981214554 779 dbSNP
rs971520047 785 dbSNP
rs1203559656 787 dbSNP
rs1284013633 788 dbSNP
rs777799915 796 dbSNP
rs1488799039 800 dbSNP
rs564785991 801 dbSNP
rs1022598470 803 dbSNP
rs6801027 806 dbSNP
rs960624142 807 dbSNP
rs951703784 809 dbSNP
rs1186218916 811 dbSNP
rs1368741336 812 dbSNP
rs1193982979 821 dbSNP
rs1027230154 822 dbSNP
rs1420030116 837 dbSNP
rs980607191 845 dbSNP
rs970572870 847 dbSNP
rs1021652045 860 dbSNP
rs996160584 861 dbSNP
rs140307647 862 dbSNP
rs897325042 865 dbSNP
rs1308739114 870 dbSNP
rs1354933688 875 dbSNP
rs1242728383 879 dbSNP
rs1278893844 880 dbSNP
rs1483201425 885 dbSNP
rs78506634 892 dbSNP
rs1256244388 895 dbSNP
rs1008325496 903 dbSNP
rs1443597936 905 dbSNP
rs1031598176 909 dbSNP
rs541832820 913 dbSNP
rs1440159152 916 dbSNP
rs572971240 918 dbSNP
rs1465492311 921 dbSNP
rs932666576 938 dbSNP
rs1404471352 944 dbSNP
rs1389722749 956 dbSNP
rs1330981516 958 dbSNP
rs1050369778 959 dbSNP
rs1449537373 961 dbSNP
rs772424123 963 dbSNP
rs898280530 964 dbSNP
rs1409862394 965 dbSNP
rs1258231724 971 dbSNP
rs1403622273 974 dbSNP
rs1038125776 983 dbSNP
rs1433260202 984 dbSNP
rs939714767 987 dbSNP
rs779017668 988 dbSNP
rs908216470 989 dbSNP
rs1056115781 999 dbSNP
rs553076155 1000 dbSNP
rs926543091 1004 dbSNP
rs1460587992 1006 dbSNP
rs893134159 1009 dbSNP
rs967899857 1010 dbSNP
rs1467382920 1011 dbSNP
rs1367370101 1012 dbSNP
rs753725232 1013 dbSNP
rs1054417999 1018 dbSNP
rs934531484 1023 dbSNP
rs4974498 1025 dbSNP
rs151272989 1027 dbSNP
rs1317953516 1029 dbSNP
rs530009591 1038 dbSNP
rs990201420 1040 dbSNP
rs561357014 1041 dbSNP
rs1476807211 1042 dbSNP
rs1192766166 1043 dbSNP
rs1424458691 1044 dbSNP
rs1031650645 1045 dbSNP
rs1231216875 1047 dbSNP
rs1349482671 1052 dbSNP
rs1458791099 1055 dbSNP
rs1181266096 1057 dbSNP
rs1383175852 1064 dbSNP
rs1399969422 1082 dbSNP
rs1279335293 1087 dbSNP
rs1340650843 1092 dbSNP
rs751764443 1095 dbSNP
rs1008208997 1101 dbSNP
rs1279264120 1107 dbSNP
rs113475432 1110 dbSNP
rs1320727547 1110 dbSNP
rs1345511473 1123 dbSNP
rs1279109056 1124 dbSNP
rs767271237 1130 dbSNP
rs915691871 1133 dbSNP
rs536899690 1136 dbSNP
rs1489333279 1154 dbSNP
rs116551572 1155 dbSNP
rs1413095169 1156 dbSNP
rs1277258936 1169 dbSNP
rs1341552728 1170 dbSNP
rs1028565789 1171 dbSNP
rs991193008 1187 dbSNP
rs1362449353 1188 dbSNP
rs997461001 1197 dbSNP
rs951755867 1204 dbSNP
rs898669514 1205 dbSNP
rs761519020 1208 dbSNP
rs866323564 1209 dbSNP
rs1315357401 1214 dbSNP
rs879195208 1216 dbSNP
rs9450 1221 dbSNP
rs1396279394 1225 dbSNP
rs533218260 1226 dbSNP
rs1375244274 1227 dbSNP
rs1159670766 1230 dbSNP
rs534623121 1237 dbSNP
rs565758921 1249 dbSNP
rs1286732162 1250 dbSNP
rs1355788350 1251 dbSNP
rs1406135694 1253 dbSNP
rs763613060 1255 dbSNP
rs1483593885 1256 dbSNP
rs1183867957 1259 dbSNP
rs1158010262 1263 dbSNP
rs1473171331 1264 dbSNP
rs762588112 1279 dbSNP
rs1056557481 1293 dbSNP
rs1159618571 1300 dbSNP
rs1382491901 1304 dbSNP
rs191350252 1306 dbSNP
rs926568278 1307 dbSNP
rs1484675980 1308 dbSNP
rs142371003 1309 dbSNP
rs996930980 1321 dbSNP
rs1304265452 1325 dbSNP
rs202213680 1327 dbSNP
rs1445845528 1331 dbSNP
rs1309723075 1332 dbSNP
rs1378788860 1335 dbSNP
rs771579443 1342 dbSNP
rs1281713029 1348 dbSNP
rs117257273 1352 dbSNP
rs1356477321 1355 dbSNP
rs186350896 1357 dbSNP
rs751488446 1358 dbSNP
rs141200519 1367 dbSNP
rs903073925 1371 dbSNP
rs1045639311 1378 dbSNP
rs1299172679 1379 dbSNP
rs955397718 1381 dbSNP
rs1433339688 1382 dbSNP
rs1477216334 1389 dbSNP
rs369851176 1398 dbSNP
rs915744229 1399 dbSNP
rs975700506 1401 dbSNP
rs1055475485 1409 dbSNP
rs962929529 1411 dbSNP
rs1177947945 1413 dbSNP
rs1017135165 1416 dbSNP
rs1405973795 1425 dbSNP
rs747576929 1431 dbSNP
rs920274556 1434 dbSNP
rs972117501 1438 dbSNP
rs1433990242 1447 dbSNP
rs961718273 1450 dbSNP
rs1420080992 1454 dbSNP
rs908815974 1463 dbSNP
rs773623980 1477 dbSNP
rs78019276 1482 dbSNP
rs182902096 1490 dbSNP
rs1034769195 1491 dbSNP
rs555670940 1491 dbSNP
rs576974941 1502 dbSNP
rs957410933 1507 dbSNP
rs1194047833 1513 dbSNP
rs1033031609 1525 dbSNP
rs1486728987 1529 dbSNP
rs1221288198 1530 dbSNP
rs1045095450 1533 dbSNP
rs1239965695 1534 dbSNP
rs548154573 1538 dbSNP
rs190399139 1543 dbSNP
rs1274501504 1552 dbSNP
rs1211339775 1556 dbSNP
rs1046101509 1557 dbSNP
rs1170997972 1560 dbSNP
rs1131970 1563 dbSNP
rs1398186185 1570 dbSNP
rs1216648817 1572 dbSNP
rs1322671026 1573 dbSNP
rs1360336092 1576 dbSNP
rs1014089373 1578 dbSNP
rs1296211948 1579 dbSNP
rs1339998340 1581 dbSNP
rs1219290261 1583 dbSNP
rs935154613 1586 dbSNP
rs924728124 1589 dbSNP
rs1270027188 1590 dbSNP
rs1291078226 1591 dbSNP
rs1453636913 1593 dbSNP
rs1437413078 1596 dbSNP
rs1215148674 1597 dbSNP
rs1487717047 1609 dbSNP
rs556939317 1609 dbSNP
rs934036302 1610 dbSNP
rs1374239372 1615 dbSNP
rs1397048546 1617 dbSNP
rs1162236602 1625 dbSNP
rs1414282770 1631 dbSNP
rs749370789 1638 dbSNP
rs186341461 1641 dbSNP
rs1461002428 1655 dbSNP
rs1393557880 1664 dbSNP
rs1400752153 1666 dbSNP
rs975390479 1675 dbSNP
rs1338704414 1682 dbSNP
rs1284980147 1689 dbSNP
rs1055523962 1691 dbSNP
rs1362091315 1710 dbSNP
rs962981452 1710 dbSNP
rs546025524 1717 dbSNP
rs982982218 1718 dbSNP
rs898934925 1730 dbSNP
rs181983530 1739 dbSNP
rs1219348257 1741 dbSNP
rs1263263888 1742 dbSNP
rs1036098733 1754 dbSNP
rs1186456725 1763 dbSNP
rs144214322 1766 dbSNP
rs1446286483 1770 dbSNP
rs911558432 1778 dbSNP
rs1035560500 1780 dbSNP
rs1420234288 1781 dbSNP
rs1211203776 1782 dbSNP
rs1003307191 1785 dbSNP
rs1413948620 1787 dbSNP
rs1335183266 1791 dbSNP
rs1467661717 1794 dbSNP
rs1385252830 1798 dbSNP
rs1444768455 1806 dbSNP
rs537371594 1808 dbSNP
rs934194534 1815 dbSNP
rs12317 1817 dbSNP
rs1010513737 1819 dbSNP
rs1478658864 1820 dbSNP
rs935208423 1820 dbSNP
rs975553877 1820 dbSNP
rs890304452 1821 dbSNP
rs1440054228 1828 dbSNP
rs957506277 1829 dbSNP
rs1306305244 1832 dbSNP
rs750390492 1836 dbSNP
rs554930804 1843 dbSNP
rs1489557558 1849 dbSNP
rs1373401765 1850 dbSNP
rs967787464 1855 dbSNP
rs534585274 1857 dbSNP
rs962063517 1860 dbSNP
rs1377774987 1863 dbSNP
rs1014138646 1868 dbSNP
rs1463434326 1869 dbSNP
rs1401542887 1870 dbSNP
rs572113059 1874 dbSNP
rs1393466851 1882 dbSNP
rs894374106 1886 dbSNP
rs558618842 1891 dbSNP
rs1331014833 1895 dbSNP
rs1234532078 1899 dbSNP
rs1034212841 1901 dbSNP
rs189229558 1911 dbSNP
rs1256995245 1912 dbSNP
rs1480875209 1915 dbSNP
rs983035958 1921 dbSNP
rs951686342 1926 dbSNP
rs757027555 1936 dbSNP
rs1432531772 1943 dbSNP
rs898989357 1949 dbSNP
rs1036559841 1957 dbSNP
rs1396466913 1964 dbSNP
rs1191382886 1966 dbSNP
rs751187998 1967 dbSNP
rs569744847 1999 dbSNP
rs928171600 2003 dbSNP
rs982669650 2008 dbSNP
rs1463901034 2017 dbSNP
rs890125288 2018 dbSNP
rs561356231 2031 dbSNP
rs763661611 2044 dbSNP
rs1390383637 2046 dbSNP
rs186133841 2068 dbSNP
rs1178493482 2071 dbSNP
rs921536168 2076 dbSNP
rs975647169 2085 dbSNP
rs1216251152 2090 dbSNP
rs1010564772 2095 dbSNP
rs568395654 2099 dbSNP
rs926104980 2100 dbSNP
rs7639380 2102 dbSNP
rs1488008853 2104 dbSNP
rs1350545404 2107 dbSNP
rs999413665 2108 dbSNP
rs890347566 2122 dbSNP
rs368724304 2124 dbSNP
rs1051630367 2132 dbSNP
rs1278402881 2144 dbSNP
rs1233813101 2147 dbSNP
rs1262441512 2156 dbSNP
rs1430524606 2158 dbSNP
rs1354739069 2159 dbSNP
rs1368273755 2167 dbSNP
rs1458713207 2168 dbSNP
rs1166093128 2173 dbSNP
rs1309220720 2179 dbSNP
rs1359173032 2190 dbSNP
rs967461515 2194 dbSNP
rs1297050403 2195 dbSNP
rs528462013 2203 dbSNP
rs992813568 2204 dbSNP
rs775127343 2211 dbSNP
rs113706392 2215 dbSNP
rs868045065 2227 dbSNP
rs1293930942 2236 dbSNP
rs180847558 2254 dbSNP
rs1171565952 2264 dbSNP
rs77820313 2268 dbSNP
rs1180387459 2269 dbSNP
rs1255733100 2290 dbSNP
rs761235542 2293 dbSNP
rs982333910 2299 dbSNP
rs1185827058 2301 dbSNP
rs563826946 2307 dbSNP
rs1378781980 2309 dbSNP
rs367982303 2310 dbSNP
rs773639623 2319 dbSNP
rs1416799659 2320 dbSNP
rs1407845156 2321 dbSNP
rs772431339 2327 dbSNP
rs1454867760 2329 dbSNP
rs916707167 2331 dbSNP
rs1377969557 2335 dbSNP
rs1189301596 2336 dbSNP
rs1486969797 2337 dbSNP
rs1374330054 2339 dbSNP
rs1014725493 2350 dbSNP
rs1239363690 2350 dbSNP
rs377051198 2356 dbSNP
rs989196382 2357 dbSNP
rs574718809 2358 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_ControlB_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gauacccacccugUCUCUCCc 5'
                       :|||||| 
Target 5' --------guuugGGAGAGGa 3'
1 - 13
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_ControlB_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control B
Location of target site ENST00000249883.5 | 3UTR | GUUUGGGAGAGGAGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
209 hsa-miR-6769b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT181753 UHMK1 U2AF homology motif kinase 1 2 2
MIRT287119 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT395372 CDC42EP4 CDC42 effector protein 4 2 4
MIRT472533 NACC1 nucleus accumbens associated 1 2 4
MIRT472611 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT482405 ADRB1 adrenoceptor beta 1 2 10
MIRT492330 SETD1B SET domain containing 1B 2 2
MIRT499238 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT512274 ARHGDIA Rho GDP dissociation inhibitor alpha 2 6
MIRT534548 RUNX1 runt related transcription factor 1 2 2
MIRT535374 PEX5L peroxisomal biogenesis factor 5 like 2 2
MIRT535424 PDZD8 PDZ domain containing 8 2 2
MIRT539329 AHSA2 activator of HSP90 ATPase homolog 2 2 4
MIRT569350 EFHC1 EF-hand domain containing 1 2 2
MIRT576116 Klf6 Kruppel-like factor 6 2 2
MIRT607241 LINS lines homolog 1 2 4
MIRT607364 ASAH2 N-acylsphingosine amidohydrolase 2 2 4
MIRT609572 CATSPER4 cation channel sperm associated 4 2 2
MIRT610045 SERPINA3 serpin family A member 3 2 2
MIRT610284 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT610302 KLHL21 kelch like family member 21 2 2
MIRT610393 FOXE1 forkhead box E1 2 2
MIRT610432 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT610510 BARHL2 BarH like homeobox 2 2 2
MIRT611818 FCRL4 Fc receptor like 4 2 2
MIRT612755 MYOCD myocardin 2 2
MIRT613698 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613917 POU3F1 POU class 3 homeobox 1 2 2
MIRT615153 URGCP-MRPS24 URGCP-MRPS24 readthrough 2 2
MIRT615201 CLUAP1 clusterin associated protein 1 2 2
MIRT615338 ABCC12 ATP binding cassette subfamily C member 12 2 2
MIRT616706 UBXN2A UBX domain protein 2A 2 2
MIRT617186 GOSR2 golgi SNAP receptor complex member 2 2 4
MIRT617526 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT617596 NUDT5 nudix hydrolase 5 2 4
MIRT617763 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT618613 SHOX short stature homeobox 2 2
MIRT619301 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619515 TXLNB taxilin beta 2 2
MIRT619925 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT619942 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT620025 NFAM1 NFAT activating protein with ITAM motif 1 2 2
MIRT620554 C10orf10 chromosome 10 open reading frame 10 2 4
MIRT620752 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT621798 TMEM233 transmembrane protein 233 2 2
MIRT621843 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT622693 PLSCR1 phospholipid scramblase 1 2 2
MIRT622733 PITPNM3 PITPNM family member 3 2 2
MIRT623004 ONECUT3 one cut homeobox 3 2 2
MIRT623211 MTFR1L mitochondrial fission regulator 1 like 2 2
MIRT623771 GPR37L1 G protein-coupled receptor 37 like 1 2 2
MIRT624119 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT624150 DIAPH1 diaphanous related formin 1 2 2
MIRT624443 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT624855 ABI2 abl interactor 2 2 2
MIRT625311 SHISA6 shisa family member 6 2 2
MIRT625741 MTSS1 MTSS1, I-BAR domain containing 2 2
MIRT626292 ZNF85 zinc finger protein 85 2 2
MIRT627400 TMEM170A transmembrane protein 170A 2 2
MIRT627464 SYNRG synergin gamma 2 2
MIRT627913 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT636508 GDAP1L1 ganglioside induced differentiation associated protein 1 like 1 2 2
MIRT636910 KIAA0408 KIAA0408 2 2
MIRT637302 ACTN2 actinin alpha 2 2 2
MIRT638230 SOGA3 SOGA family member 3 2 2
MIRT639880 STC1 stanniocalcin 1 2 2
MIRT639999 PHF21B PHD finger protein 21B 2 2
MIRT640149 CEP104 centrosomal protein 104 2 2
MIRT640699 SKI SKI proto-oncogene 2 2
MIRT640911 RAB13 RAB13, member RAS oncogene family 2 2
MIRT641518 CREBBP CREB binding protein 2 2
MIRT641990 OXSR1 oxidative stress responsive 1 2 2
MIRT642635 EPPIN epididymal peptidase inhibitor 2 2
MIRT642744 TDRD6 tudor domain containing 6 2 2
MIRT642759 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT642787 CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 2 2
MIRT643054 EPPIN-WFDC6 EPPIN-WFDC6 readthrough 2 2
MIRT643104 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT643316 TMEM151B transmembrane protein 151B 2 2
MIRT643715 ITK IL2 inducible T-cell kinase 2 2
MIRT644087 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT644112 SEL1L3 SEL1L family member 3 2 2
MIRT644377 ZNF286A zinc finger protein 286A 2 2
MIRT644408 FRMD6 FERM domain containing 6 2 2
MIRT644684 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT644744 CCDC174 coiled-coil domain containing 174 2 2
MIRT644876 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT645417 FAM110A family with sequence similarity 110 member A 2 2
MIRT645928 PLXNA3 plexin A3 2 2
MIRT646181 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646554 TMCC2 transmembrane and coiled-coil domain family 2 2 2
MIRT647235 OR6A2 olfactory receptor family 6 subfamily A member 2 2 2
MIRT647263 PTGDR2 prostaglandin D2 receptor 2 2 2
MIRT647660 FOXL1 forkhead box L1 2 2
MIRT648284 TRAPPC2L trafficking protein particle complex 2 like 2 2
MIRT648493 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT648963 TMEM45B transmembrane protein 45B 2 2
MIRT649511 RAB17 RAB17, member RAS oncogene family 2 2
MIRT650446 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT650712 KRT32 keratin 32 2 2
MIRT651069 ZNF518B zinc finger protein 518B 2 4
MIRT651090 ZNF516 zinc finger protein 516 2 2
MIRT651193 ZNF281 zinc finger protein 281 2 2
MIRT651330 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT651445 XKR4 XK related 4 2 2
MIRT651517 WNT4 Wnt family member 4 2 4
MIRT651694 VPS13D vacuolar protein sorting 13 homolog D 2 2
MIRT652173 TRIM66 tripartite motif containing 66 2 2
MIRT652432 TMEM239 transmembrane protein 239 2 2
MIRT652656 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT652707 THBS2 thrombospondin 2 2 2
MIRT652812 TBL2 transducin beta like 2 2 2
MIRT653350 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653471 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT653658 SLC27A4 solute carrier family 27 member 4 2 2
MIRT654691 PSMB5 proteasome subunit beta 5 2 2
MIRT654735 PRLR prolactin receptor 2 2
MIRT654931 POLR3D RNA polymerase III subunit D 2 2
MIRT655209 PHAX phosphorylated adaptor for RNA export 2 2
MIRT655346 PCP4L1 Purkinje cell protein 4 like 1 2 2
MIRT655404 PANK1 pantothenate kinase 1 2 2
MIRT655482 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT655964 NDNF neuron derived neurotrophic factor 2 2
MIRT656017 MYPN myopalladin 2 2
MIRT656491 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT657151 ITGA1 integrin subunit alpha 1 2 2
MIRT657411 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT657608 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT658181 FBXO9 F-box protein 9 2 2
MIRT658932 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT659028 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT659092 DENR density regulated re-initiation and release factor 2 2
MIRT659204 CYBB cytochrome b-245 beta chain 2 2
MIRT659718 CCDC93 coiled-coil domain containing 93 2 2
MIRT660185 BNC2 basonuclin 2 2 2
MIRT660805 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT660900 ADCY6 adenylate cyclase 6 2 2
MIRT660925 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT661741 DTHD1 death domain containing 1 2 2
MIRT661998 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT662639 PKHD1L1 PKHD1 like 1 2 2
MIRT664338 RAB8A RAB8A, member RAS oncogene family 2 2
MIRT666743 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT667070 PANK3 pantothenate kinase 3 2 2
MIRT667925 IGLON5 IgLON family member 5 2 2
MIRT668488 ETV3 ETS variant 3 2 2
MIRT668610 EHD4 EH domain containing 4 2 2
MIRT669419 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669652 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT674005 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT680447 SLCO5A1 solute carrier organic anion transporter family member 5A1 2 2
MIRT684326 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT685625 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT689978 ZNF185 zinc finger protein 185 with LIM domain 2 2
MIRT693962 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT698543 TFRC transferrin receptor 2 2
MIRT699982 RREB1 ras responsive element binding protein 1 2 2
MIRT702898 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT707383 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT708312 CDH8 cadherin 8 2 2
MIRT708406 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT709299 LDLRAD4 low density lipoprotein receptor class A domain containing 4 2 2
MIRT710326 STK40 serine/threonine kinase 40 2 2
MIRT710729 C19orf68 zinc finger SWIM-type containing 9 2 2
MIRT710970 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT711178 EMCN endomucin 2 2
MIRT711590 SETD1A SET domain containing 1A 2 2
MIRT711611 LHX5 LIM homeobox 5 2 2
MIRT711701 GMPR guanosine monophosphate reductase 2 2
MIRT711850 AMOTL2 angiomotin like 2 2 2
MIRT712358 NAT14 N-acetyltransferase 14 (putative) 2 2
MIRT712377 MTPN myotrophin 2 2
MIRT712469 KCNC3 potassium voltage-gated channel subfamily C member 3 2 2
MIRT712839 RHOA ras homolog family member A 2 2
MIRT713592 ANKMY1 ankyrin repeat and MYND domain containing 1 2 2
MIRT713982 ASIC4 acid sensing ion channel subunit family member 4 2 2
MIRT714534 ZBTB39 zinc finger and BTB domain containing 39 2 2
MIRT714570 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 2 2
MIRT714610 EXO5 exonuclease 5 2 2
MIRT714943 ZNF330 zinc finger protein 330 2 2
MIRT715132 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT716018 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT716204 TYW3 tRNA-yW synthesizing protein 3 homolog 2 2
MIRT716674 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT717366 EDN2 endothelin 2 2 2
MIRT718110 CRTC1 CREB regulated transcription coactivator 1 2 2
MIRT718502 GYS1 glycogen synthase 1 2 2
MIRT719146 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719415 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT719986 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720347 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT720452 SLC16A5 solute carrier family 16 member 5 2 2
MIRT720493 TMEM178B transmembrane protein 178B 2 2
MIRT720666 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT721091 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT721334 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT721384 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721508 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT721827 POU6F1 POU class 6 homeobox 1 2 2
MIRT722136 TTLL11 tubulin tyrosine ligase like 11 2 2
MIRT723070 GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 2 2
MIRT723115 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT723374 ZNF470 zinc finger protein 470 2 2
MIRT724446 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT724528 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT724643 PKDREJ polycystin family receptor for egg jelly 2 2
MIRT724711 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT724750 ZNF391 zinc finger protein 391 2 2
MIRT724770 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6769b Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-6769b Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-miR-6769b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-6769b-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-6769b-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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