pre-miRNA Information
pre-miRNA hsa-mir-744   
Genomic Coordinates chr17: 12081899 - 12081996
Synonyms MIRN744, hsa-mir-744, MIR744
Description Homo sapiens miR-744 stem-loop
Comment This sequence was identified as a miRNA candidate by Berezikov et al. using RAKE and MPSS techniques .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-744-5p
Sequence 11| UGCGGGGCUAGGGCUAACAGCA |32
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN23015028 1 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs557969425 1 dbSNP
rs748252260 4 dbSNP
rs1470408501 7 dbSNP
rs1178657616 10 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Biomarker Information
Biomarker ID Name Type Discovered From Mode Level Source Testing Methods
B6B8SM miR-744-5p Safety Biomarker (SAF) Clinical/Experimental Data Expression Increase Urine Real-time polymerase chain reaction
Gene Information
Gene Symbol CYTH2   
Synonyms ARNO, CTS18, CTS18.1, PSCD2, PSCD2L, SEC7L, Sec7p-L, Sec7p-like, cytohesin-2
Description cytohesin 2
Transcript NM_004228   
Other Transcripts NM_017457   
Expression
Putative miRNA Targets on CYTH2
3'UTR of CYTH2
(miRNA target sites are highlighted)
>CYTH2|NM_004228|3'UTR
   1 CCCCCTGCCCCCAACTCCATTATTTATTACGGAGCTGCCCCGCCTGGGTGGCCGGACCCCTGGGCCTTGGGGCTGTGGAT
  81 CCTGGTTCCCTGTTTGGAAAATTCACCACCTCTAGCTCCTCACTGTTCTTTGTAATTAACACGCTGTTGGTAATCTTATT
 161 AATTATTTAACCACTTGGCCTGCTGACCCCCTCATTTCTTGGGGTTGACAGAGTCGAGGTGCTCCGTGGAGCCAGCCTGT
 241 TTCCCTGGACAGGGGCCTGGACCCGCCTGTCTCTGGGTGCTGCCTGGGCTGTCCCGGTGGGTCTGTTCTGGTTTCACCCC
 321 GAGCCCAGCAGGAGTGGAGTAAAGGGAGAAGGTTAATATGGTGGGAGTCTGGAGTTGGAATTGGCCGGGGACAGAGTTTA
 401 GAATGCAGGGATTCAGGGTCAAGGTCTAGCATTCATTCTAGAAGTTACTTGACAGCCATCAGCCAGTTACGCTACAGCCA
 481 TCAGCTAGTTCCCATCGTTGCTTTCATGGGGCTTGAGGTCTTTGAGGGGCAGGAGATGAAGCTGGTGAGGTTGTGAGCTG
 561 GGCCAGGGCTTTGAGGACAACCTGGAGCTGGAAGAACATGCGACCACCTCAGGGAGGGTCAGGGAAGGATGAGTGGGGAG
 641 GTGGCCCATGTCCTGCAAGGGCCTTGCTGATGGGATGTCCTGAAGGGCTGGGCAGCCTTAGATCGGGCTAAGAGGGCAGG
 721 ACTGTGGGCCAGTGCCAGAGCCAGGCTTGTCTGTTCTCAAAGGATCAGCCTCCTTTGGAGGACATTTTGTGTCAAGGATA
 801 GGGCTGAGGACCTGCGTTCTGAACGTCTTTCCTGGGATTCTTGACAGCCAAAGAAATTCGAGGATCGCCTCTATGAAGGT
 881 GAAGTCTTGGCATGTGGGGTACCCCTGAATCCTGGGCTAAGGTCTGTGACCTTTTGCCCTCCAGTTGGGGTATGTGTGGT
 961 GTCCCCAAAGAACAAGGGCTCGTGGATCCCGAGCAGGGTGCGATGGCGGATTGGGAGGTCCCATGTCACTCTCCCATGCC
1041 CGCCTTTGAAGCTGAGGCGCTCTTTAGTTAACAAACTACAAGTCCCAGCAGGGACCGGGACGCGGGTGGGAGAGGCGCCT
1121 GTGGCCCCGAGGCGTGCCGCGAGTTGTAGTCCCTCCTGCCCGCTGTGTTCGCTTTTGAGCTCTCCGATGGGATGCGGCGC
1201 TTCGGAATTTCGGGCTTTGATCCCTGTCCCGCCCTTGGCCACAGGCACCTGCCGGCCTGAAGGCCCCCGCGGTGGGGGTA
1281 CCCTGCGCCCCTCCGCGGGAAGGTGGACTACAGTTATCGGCAGGCTGTGCGGCGCCAAAGCCACGGTGACCCAGACCCGA
1361 GGTTTTTCCGGGCGTCGCAGTTTCCCGAGACTCCGTGGCGGCGTTTGTCTTCTTTTTCTTAGTCAGATCCCGTACTTTTG
1441 TGGAGGGTAGAGGAGGCTTTGACCGCCGCGGCCCCGGGGGCTGGTGGGAAATGGAGTTCCAAATGAGAAAATAGAATTCC
1521 CCACTTCTCTTTCCCACAGGTGCCAGGGAAACGGAGTCATCGACCCAAGAAGGTCGTGGGAGATGAGGTCCCAGGGTAAA
1601 CAGCGGGTCCCGCCACTATGTCACCCTTTCCTGCCGCCTCCCCGGATGAACTGCATGCAGGGCGGCCGGCTCCGTGGCAG
1681 GCAGAGGCAGGAAGAGGCGCGGAGCCCGCTGGTGGCGAAGAGGGGAGTGCGGCGGGAGGGGAGGGCAGAGGCAGGCGGCC
1761 GGTCGCGTGGGGCCTGGGCCGCCCCAGGAGGGCCTCTGGCTGGATTCTTAGCAGATGGAAGCCGTGCAAGGGCAGGAGGC
1841 AGGGGCCTGACGTGTTTGGATTGAGGTTGCAGGAGGGGCCCCTGGCTGCTTCAGGGAGAATAATTTGGAGGCGAGCGGGG
1921 AGGTGAGAGGAAGCTGTGCGGTGCAGGATGGCGTGGCTGTGGAGGTGGAGAACGTTGGGCCACGCTAGGAGTCTTGAAAG
2001 AGGAGCCAAAAGGACTTGCTGAGAGCCGCCGCAGCTGGTGAATGACGGTGCCATGACTGAGGTGGTCGAAAGGGAGTATT
2081 TAAGGGGAAATCAGGCATTCCGTTTTGACCAAATTAAGCTGGAGATGCCTGTGGAACATTCCAGCCAGGCTGCATCACGT
2161 CACACTGACCTTCAGCATTGCCCACAGTCCATCTTCCCCCAGGACCTGAGGATTTTGCGTCCGGCTCCCTCCTCGCCCAG
2241 GACCCCCAAGCTCCCAGCACGCTTCTGATTTTTTTTGTAGGTTTTTTTTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTT
2321 GAGAGGGAGTCTCACTTTGTGCCCTAGACTGGAGTGCAATGGCGCCATCTCGGCTTACTGCAACCTCCACCTCCCAGGTG
2401 CAAGCGATTCCCCTGCCTCAGCTTCCCGAGTAGCTGGGATTACAGATGTGAGCCACCGTACCCAGCTAATTTTTGTATTT
2481 TTAGTAGAGACGGGGTTTCACCATATTGGCCAAGCTGGTCTCGAACTCCTGACCTCAGGCGATCCATCTGTCTCAGCCTC
2561 CCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCAGGCCTCAGCCCACTTCTTTTGGGTGGCAATGGTTTGGATATC
2641 GTTTGTCCTCACTAAAATTCATGTTGAGATTCGAGCCCCAGTGTGGCAGGTGTTGGGATGTGGGGCCTCATAAGGAGCTG
2721 TGTGGTCTTGGAGGTGGAGTCCTCATGGATAGATTAATGCCTGCCTTAAGGGGTGAGTGAGTGCTCACCCTTGGGAATTT
2801 GGGAATTTGGTTTTCTCTCCCTTGCTTCCTTCAGCACCATGTGATCTCTGTGCACACAGCTGCATCCTTCTGCCCTCCCC
2881 CAGAAGCAGCAGCAGCCTCAGGGATGAGGGAGGTCCTCAGTGAGTGCACCTGCCCAGTCTTGAACCTTCCAGCCATCAGA
2961 ATCTGAGCCAAATCAACCTCTTCCTTTATAAAGACCCAGCCTCAGGTCTTCTGTCAGAGCAACACAAAATGGACTCAGCA
3041 CGGATCAAATTGTGTCTCCCCCACCCCCACAAAAAACTTTATATTAAAATCCTAACCCCCAGCAAAAAAAAAAAAAAAAA
3121 AA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acGACAAU--CGGGAUCGGGGCGu 5'
            :| |||  |  || ||||||| 
Target 5' atTTATTACGGAGCT-GCCCCGCc 3'
22 - 44 149.00 -15.90
2
miRNA  3' acGACAAUCGGGAUCGGGGCGu 5'
            || | | |||| |:||||| 
Target 5' ggCTTTGATCCCT-GTCCCGCc 3'
1213 - 1233 147.00 -21.30
3
miRNA  3' acgacaauCGGG-AUCGGGGCgu 5'
                  |||: |:||||||  
Target 5' ggagaggcGCCTGTGGCCCCGag 3'
1109 - 1131 134.00 -19.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30485040 5 COSMIC
COSN20079483 12 COSMIC
COSN31556020 30 COSMIC
COSN24387550 43 COSMIC
COSN30187838 43 COSMIC
COSN30191252 44 COSMIC
COSN30652331 55 COSMIC
COSN30519475 67 COSMIC
COSN1770129 348 COSMIC
COSN6145884 469 COSMIC
COSN6552794 867 COSMIC
COSN7447531 991 COSMIC
COSN17859358 1056 COSMIC
COSN16181505 1213 COSMIC
COSN5438753 1419 COSMIC
COSN15810025 1496 COSMIC
COSN1217191 1712 COSMIC
COSN17993956 1712 COSMIC
COSN22462927 1759 COSMIC
COSN26398793 2283 COSMIC
COSN27256774 2293 COSMIC
COSN9851428 2298 COSMIC
COSN1770130 2335 COSMIC
COSN19035705 2442 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs781519260 1 dbSNP
rs1457433161 2 dbSNP
rs748650180 3 dbSNP
rs1469347337 4 dbSNP
rs769211488 5 dbSNP
rs762239245 6 dbSNP
rs1324076092 8 dbSNP
rs772720925 9 dbSNP
rs770570023 10 dbSNP
rs1276498623 12 dbSNP
rs968725441 16 dbSNP
rs1221507652 17 dbSNP
rs1289965529 18 dbSNP
rs1462949704 20 dbSNP
rs774194050 20 dbSNP
rs765995844 24 dbSNP
rs1227941290 29 dbSNP
rs759306723 31 dbSNP
rs767486176 32 dbSNP
rs775309098 36 dbSNP
rs202175718 38 dbSNP
rs765232405 42 dbSNP
rs371251069 43 dbSNP
rs960403327 47 dbSNP
rs752010196 53 dbSNP
rs376786466 54 dbSNP
rs1296557410 55 dbSNP
rs567227382 58 dbSNP
rs1346864520 68 dbSNP
rs1159283892 73 dbSNP
rs1399606025 83 dbSNP
rs1377888729 87 dbSNP
rs34826342 88 dbSNP
rs12305 96 dbSNP
rs11550780 99 dbSNP
rs967885631 102 dbSNP
rs1444818571 103 dbSNP
rs1244151389 105 dbSNP
rs1181614315 110 dbSNP
rs546654673 111 dbSNP
rs1482584460 121 dbSNP
rs1244328886 122 dbSNP
rs1216661089 123 dbSNP
rs1353094123 132 dbSNP
rs1248471640 138 dbSNP
rs1283889611 138 dbSNP
rs746331323 143 dbSNP
rs983351446 144 dbSNP
rs1394066938 150 dbSNP
rs1204233178 156 dbSNP
rs1246802283 158 dbSNP
rs1289390751 158 dbSNP
rs1429863409 160 dbSNP
rs1358115307 163 dbSNP
rs925140644 164 dbSNP
rs571340060 173 dbSNP
rs1424951317 176 dbSNP
rs1384186249 178 dbSNP
rs1190012903 179 dbSNP
rs1422419294 186 dbSNP
rs941668283 188 dbSNP
rs1488222507 189 dbSNP
rs1224780202 191 dbSNP
rs1039110505 199 dbSNP
rs974592051 216 dbSNP
rs921859862 217 dbSNP
rs1361284706 223 dbSNP
rs139093746 226 dbSNP
rs550784674 227 dbSNP
rs568964709 228 dbSNP
rs891945654 239 dbSNP
rs1405023567 242 dbSNP
rs1387182083 244 dbSNP
rs907597485 249 dbSNP
rs1010378275 251 dbSNP
rs1367122791 252 dbSNP
rs1043260140 264 dbSNP
rs1217711914 265 dbSNP
rs904781289 266 dbSNP
rs940462184 270 dbSNP
rs1325425279 272 dbSNP
rs116036991 284 dbSNP
rs899372273 285 dbSNP
rs1266681620 288 dbSNP
rs1463529737 289 dbSNP
rs1001708783 290 dbSNP
rs780350242 296 dbSNP
rs896083191 297 dbSNP
rs1487928513 298 dbSNP
rs1014232295 300 dbSNP
rs983289371 309 dbSNP
rs1020729004 318 dbSNP
rs903255340 321 dbSNP
rs1000727176 322 dbSNP
rs143134675 328 dbSNP
rs1299169249 332 dbSNP
rs1465423033 345 dbSNP
rs1398488086 352 dbSNP
rs1158968835 353 dbSNP
rs747409645 364 dbSNP
rs974559724 370 dbSNP
rs1377166773 376 dbSNP
rs1051437525 387 dbSNP
rs376792804 388 dbSNP
rs1421145766 389 dbSNP
rs1251507253 394 dbSNP
rs912996536 396 dbSNP
rs1434492664 398 dbSNP
rs1456286115 408 dbSNP
rs1028841803 409 dbSNP
rs1264700263 414 dbSNP
rs1204258010 417 dbSNP
rs946185527 428 dbSNP
rs150815902 435 dbSNP
rs1240558239 439 dbSNP
rs1308093399 442 dbSNP
rs1317205380 442 dbSNP
rs533916436 449 dbSNP
rs904729763 454 dbSNP
rs1170964614 459 dbSNP
rs1402085792 459 dbSNP
rs1346448808 463 dbSNP
rs1324798276 464 dbSNP
rs1364400458 469 dbSNP
rs558574779 471 dbSNP
rs940451298 472 dbSNP
rs576917513 474 dbSNP
rs1326948377 479 dbSNP
rs937583512 481 dbSNP
rs1225418447 483 dbSNP
rs139245744 488 dbSNP
rs563053768 495 dbSNP
rs1284633253 497 dbSNP
rs937463347 498 dbSNP
rs1055991187 502 dbSNP
rs896052146 507 dbSNP
rs950379598 518 dbSNP
rs1384353644 521 dbSNP
rs895789260 528 dbSNP
rs1270579439 529 dbSNP
rs574957786 530 dbSNP
rs868668582 536 dbSNP
rs542476229 543 dbSNP
rs1033027828 548 dbSNP
rs35091872 548 dbSNP
rs1005677745 559 dbSNP
rs1016502384 560 dbSNP
rs1447457803 564 dbSNP
rs1471408788 566 dbSNP
rs1159653468 569 dbSNP
rs1490758877 570 dbSNP
rs963269273 573 dbSNP
rs1413783171 577 dbSNP
rs1403662077 578 dbSNP
rs1230290727 579 dbSNP
rs1341657705 583 dbSNP
rs1167061481 589 dbSNP
rs560611252 591 dbSNP
rs899942972 592 dbSNP
rs1324458283 600 dbSNP
rs769200125 600 dbSNP
rs117703539 602 dbSNP
rs149991374 603 dbSNP
rs35365942 607 dbSNP
rs1307131326 610 dbSNP
rs774804710 611 dbSNP
rs1444214330 620 dbSNP
rs954640158 622 dbSNP
rs556219730 632 dbSNP
rs1268899213 646 dbSNP
rs1197764481 647 dbSNP
rs978516639 648 dbSNP
rs191021162 649 dbSNP
rs756487290 651 dbSNP
rs1375879863 652 dbSNP
rs144390018 653 dbSNP
rs973109041 664 dbSNP
rs1319280667 670 dbSNP
rs371763637 673 dbSNP
rs937098264 681 dbSNP
rs1347500153 688 dbSNP
rs991644199 691 dbSNP
rs1275458664 698 dbSNP
rs917457148 705 dbSNP
rs76775963 706 dbSNP
rs569004901 708 dbSNP
rs1047090573 709 dbSNP
rs772158394 710 dbSNP
rs536073508 712 dbSNP
rs576852552 714 dbSNP
rs528656352 716 dbSNP
rs543746351 716 dbSNP
rs1425290524 720 dbSNP
rs1005625401 721 dbSNP
rs1017042291 728 dbSNP
rs1234242962 740 dbSNP
rs935973753 745 dbSNP
rs1185454392 752 dbSNP
rs1385970598 757 dbSNP
rs1429287067 759 dbSNP
rs1166953880 762 dbSNP
rs1357247893 771 dbSNP
rs1237910040 774 dbSNP
rs1197323916 775 dbSNP
rs566651465 776 dbSNP
rs1232423933 783 dbSNP
rs1218711173 785 dbSNP
rs73050914 787 dbSNP
rs140203871 788 dbSNP
rs1029291258 789 dbSNP
rs996918767 790 dbSNP
rs1375921011 801 dbSNP
rs1328987329 806 dbSNP
rs1050217625 809 dbSNP
rs548803010 810 dbSNP
rs1454561793 813 dbSNP
rs767592875 816 dbSNP
rs1174825991 817 dbSNP
rs576831045 825 dbSNP
rs1409450298 826 dbSNP
rs1158903234 828 dbSNP
rs890248023 831 dbSNP
rs1008741067 832 dbSNP
rs1316458937 834 dbSNP
rs1382890821 842 dbSNP
rs1015229220 845 dbSNP
rs1019900552 847 dbSNP
rs962005415 854 dbSNP
rs1227113117 859 dbSNP
rs994487203 860 dbSNP
rs1294924391 867 dbSNP
rs1209963770 868 dbSNP
rs1288208765 870 dbSNP
rs967047693 873 dbSNP
rs143760463 874 dbSNP
rs1247895230 879 dbSNP
rs184204996 880 dbSNP
rs542467190 888 dbSNP
rs925746137 893 dbSNP
rs1302197849 902 dbSNP
rs958438229 904 dbSNP
rs1196712397 905 dbSNP
rs1346477181 909 dbSNP
rs937480199 912 dbSNP
rs991672860 915 dbSNP
rs1278402167 917 dbSNP
rs1157286874 920 dbSNP
rs1425943387 928 dbSNP
rs1414897711 933 dbSNP
rs1181824433 944 dbSNP
rs1472069725 951 dbSNP
rs917458617 955 dbSNP
rs75749674 960 dbSNP
rs1047370402 967 dbSNP
rs752474383 969 dbSNP
rs971942152 971 dbSNP
rs542038561 974 dbSNP
rs977633661 975 dbSNP
rs1038838789 977 dbSNP
rs568683611 979 dbSNP
rs562433472 982 dbSNP
rs1186821746 983 dbSNP
rs1358003019 987 dbSNP
rs936294790 987 dbSNP
rs1054376752 989 dbSNP
rs921302721 990 dbSNP
rs932658590 991 dbSNP
rs760558793 992 dbSNP
rs115750935 1002 dbSNP
rs1194551277 1008 dbSNP
rs1009122994 1009 dbSNP
rs1036225085 1011 dbSNP
rs1261070517 1015 dbSNP
rs897725579 1018 dbSNP
rs994790888 1022 dbSNP
rs1488916241 1027 dbSNP
rs1020185192 1028 dbSNP
rs966986401 1029 dbSNP
rs117877056 1030 dbSNP
rs1217869664 1032 dbSNP
rs958323601 1033 dbSNP
rs564821308 1037 dbSNP
rs958476181 1040 dbSNP
rs1366433158 1046 dbSNP
rs748076799 1053 dbSNP
rs1402836962 1058 dbSNP
rs186693850 1059 dbSNP
rs1465518924 1060 dbSNP
rs971194302 1061 dbSNP
rs977979279 1063 dbSNP
rs1434047834 1064 dbSNP
rs1266922832 1070 dbSNP
rs1189631225 1071 dbSNP
rs1458926945 1073 dbSNP
rs1264289077 1077 dbSNP
rs971586131 1078 dbSNP
rs983004863 1080 dbSNP
rs924837405 1082 dbSNP
rs1263969454 1085 dbSNP
rs757540734 1088 dbSNP
rs941320032 1090 dbSNP
rs1038381316 1093 dbSNP
rs1379603360 1098 dbSNP
rs191999713 1112 dbSNP
rs1398729245 1113 dbSNP
rs1304718903 1117 dbSNP
rs921527757 1117 dbSNP
rs1466625354 1126 dbSNP
rs1377072415 1133 dbSNP
rs932626076 1137 dbSNP
rs1174264974 1141 dbSNP
rs1051120819 1142 dbSNP
rs932748937 1144 dbSNP
rs912622481 1145 dbSNP
rs940150876 1149 dbSNP
rs1051147303 1153 dbSNP
rs765211656 1154 dbSNP
rs1482646623 1161 dbSNP
rs1253693536 1165 dbSNP
rs1479323748 1168 dbSNP
rs146848058 1171 dbSNP
rs1008696982 1180 dbSNP
rs1429868063 1180 dbSNP
rs949501371 1181 dbSNP
rs1239855583 1182 dbSNP
rs182857490 1186 dbSNP
rs897698880 1187 dbSNP
rs376502996 1188 dbSNP
rs1401616343 1193 dbSNP
rs1311123595 1194 dbSNP
rs1456666647 1200 dbSNP
rs1156256717 1201 dbSNP
rs140872495 1204 dbSNP
rs1382376515 1205 dbSNP
rs1322473348 1207 dbSNP
rs1000557685 1217 dbSNP
rs1407125093 1218 dbSNP
rs1188203627 1223 dbSNP
rs1423151001 1224 dbSNP
rs1048977510 1225 dbSNP
rs1253514215 1226 dbSNP
rs1032678163 1227 dbSNP
rs772029523 1228 dbSNP
rs187072800 1229 dbSNP
rs1227103053 1230 dbSNP
rs1262499041 1231 dbSNP
rs1213917249 1232 dbSNP
rs114030259 1233 dbSNP
rs527536803 1238 dbSNP
rs552076332 1243 dbSNP
rs971533556 1246 dbSNP
rs1291591286 1247 dbSNP
rs1401910064 1249 dbSNP
rs570480336 1250 dbSNP
rs1341147894 1251 dbSNP
rs1297826521 1252 dbSNP
rs1399137968 1255 dbSNP
rs1392677265 1256 dbSNP
rs998653975 1257 dbSNP
rs1031839643 1258 dbSNP
rs1163589227 1259 dbSNP
rs1201262116 1264 dbSNP
rs1457404425 1272 dbSNP
rs1269364298 1275 dbSNP
rs957502192 1278 dbSNP
rs908759783 1281 dbSNP
rs537835990 1284 dbSNP
rs189563950 1290 dbSNP
rs568461459 1291 dbSNP
rs1292521659 1292 dbSNP
rs780548320 1295 dbSNP
rs912600194 1300 dbSNP
rs986817473 1302 dbSNP
rs1271842739 1308 dbSNP
rs912662747 1310 dbSNP
rs1277591676 1316 dbSNP
rs1428933105 1318 dbSNP
rs944502016 1319 dbSNP
rs1386018029 1320 dbSNP
rs142121459 1321 dbSNP
rs760478079 1322 dbSNP
rs1466029499 1330 dbSNP
rs1426199548 1331 dbSNP
rs920020477 1333 dbSNP
rs903057572 1335 dbSNP
rs1246916309 1337 dbSNP
rs1304069036 1340 dbSNP
rs930438128 1344 dbSNP
rs375911058 1346 dbSNP
rs1251482555 1351 dbSNP
rs1201100582 1353 dbSNP
rs894383709 1355 dbSNP
rs1319171666 1362 dbSNP
rs935917160 1364 dbSNP
rs948651040 1365 dbSNP
rs1045806420 1369 dbSNP
rs572678650 1370 dbSNP
rs1309770808 1386 dbSNP
rs894114382 1387 dbSNP
rs531100061 1388 dbSNP
rs1368541985 1391 dbSNP
rs1244113696 1392 dbSNP
rs1289719872 1395 dbSNP
rs1333089144 1397 dbSNP
rs1024023001 1400 dbSNP
rs1361793858 1403 dbSNP
rs1031391626 1408 dbSNP
rs906960207 1417 dbSNP
rs1399456248 1419 dbSNP
rs1326352691 1421 dbSNP
rs1223520226 1423 dbSNP
rs151178155 1430 dbSNP
rs576842719 1431 dbSNP
rs77932896 1432 dbSNP
rs113261529 1435 dbSNP
rs954288832 1439 dbSNP
rs1029005096 1440 dbSNP
rs1419642099 1448 dbSNP
rs375833574 1449 dbSNP
rs565315552 1449 dbSNP
rs1444226231 1455 dbSNP
rs986763673 1458 dbSNP
rs1200139687 1466 dbSNP
rs987111513 1468 dbSNP
rs1382880735 1470 dbSNP
rs1446009249 1471 dbSNP
rs1163821754 1472 dbSNP
rs1375805774 1474 dbSNP
rs1369623883 1476 dbSNP
rs775644446 1478 dbSNP
rs1020290564 1481 dbSNP
rs1359261925 1502 dbSNP
rs945463017 1503 dbSNP
rs978173321 1505 dbSNP
rs186823866 1506 dbSNP
rs1362049464 1508 dbSNP
rs935847974 1510 dbSNP
rs1397782420 1511 dbSNP
rs1395979057 1513 dbSNP
rs1312945408 1515 dbSNP
rs1474045383 1517 dbSNP
rs1385096018 1521 dbSNP
rs973160848 1524 dbSNP
rs919987925 1525 dbSNP
rs894386565 1528 dbSNP
rs1288448458 1530 dbSNP
rs140069829 1533 dbSNP
rs1217540234 1535 dbSNP
rs1352757362 1538 dbSNP
rs1281822820 1572 dbSNP
rs948335534 1573 dbSNP
rs1045418572 1576 dbSNP
rs931411721 1580 dbSNP
rs1283150910 1581 dbSNP
rs1297131135 1589 dbSNP
rs1306033044 1591 dbSNP
rs73050916 1594 dbSNP
rs1252887935 1598 dbSNP
rs138072495 1601 dbSNP
rs1345018702 1605 dbSNP
rs1003946111 1612 dbSNP
rs193066943 1613 dbSNP
rs551990177 1617 dbSNP
rs1415144946 1620 dbSNP
rs376090530 1626 dbSNP
rs1474271888 1636 dbSNP
rs1265379310 1637 dbSNP
rs948562599 1640 dbSNP
rs1485653526 1641 dbSNP
rs1240184739 1644 dbSNP
rs1223476119 1657 dbSNP
rs1462259400 1660 dbSNP
rs1183721143 1664 dbSNP
rs1045616672 1667 dbSNP
rs1272477359 1676 dbSNP
rs1231337512 1680 dbSNP
rs1389131123 1681 dbSNP
rs928557199 1685 dbSNP
rs898634303 1686 dbSNP
rs1359419834 1687 dbSNP
rs1287548668 1688 dbSNP
rs1439072125 1690 dbSNP
rs1350766764 1692 dbSNP
rs1164876240 1700 dbSNP
rs1460292471 1703 dbSNP
rs934321636 1706 dbSNP
rs551288934 1708 dbSNP
rs1428212998 1709 dbSNP
rs1643481 1712 dbSNP
rs1488702198 1720 dbSNP
rs1252092129 1722 dbSNP
rs1028533393 1724 dbSNP
rs1465923353 1727 dbSNP
rs549895243 1732 dbSNP
rs185788741 1735 dbSNP
rs1302965601 1736 dbSNP
rs535530916 1737 dbSNP
rs1032269287 1738 dbSNP
rs1019557397 1740 dbSNP
rs554262063 1741 dbSNP
rs892412325 1743 dbSNP
rs978119555 1744 dbSNP
rs1461547356 1745 dbSNP
rs889915136 1746 dbSNP
rs1008821818 1747 dbSNP
rs566241960 1752 dbSNP
rs1307854888 1757 dbSNP
rs540022184 1761 dbSNP
rs915780515 1767 dbSNP
rs1462628024 1768 dbSNP
rs994166321 1771 dbSNP
rs558411184 1778 dbSNP
rs952769709 1780 dbSNP
rs773692996 1782 dbSNP
rs1303221747 1790 dbSNP
rs1232537114 1797 dbSNP
rs916673439 1802 dbSNP
rs1379488167 1804 dbSNP
rs969888897 1813 dbSNP
rs1391270739 1815 dbSNP
rs981701080 1817 dbSNP
rs188253586 1822 dbSNP
rs1375056601 1823 dbSNP
rs544104783 1824 dbSNP
rs1441322022 1827 dbSNP
rs1052714439 1832 dbSNP
rs1036758091 1843 dbSNP
rs914280343 1844 dbSNP
rs898240130 1845 dbSNP
rs555839364 1848 dbSNP
rs574397068 1852 dbSNP
rs995652889 1858 dbSNP
rs1050339676 1861 dbSNP
rs1181938115 1866 dbSNP
rs541527943 1868 dbSNP
rs1174786362 1880 dbSNP
rs1218286779 1882 dbSNP
rs1356317458 1885 dbSNP
rs1261653726 1886 dbSNP
rs559802319 1899 dbSNP
rs1239008788 1904 dbSNP
rs1334503607 1905 dbSNP
rs889977657 1906 dbSNP
rs193167283 1917 dbSNP
rs1019838308 1922 dbSNP
rs1049436073 1931 dbSNP
rs966660414 1937 dbSNP
rs1421702968 1938 dbSNP
rs1385463325 1941 dbSNP
rs999485722 1946 dbSNP
rs118157157 1947 dbSNP
rs1370107640 1950 dbSNP
rs1165326155 1952 dbSNP
rs879147819 1954 dbSNP
rs1008376057 1956 dbSNP
rs990959610 1958 dbSNP
rs372388925 1959 dbSNP
rs1262951271 1965 dbSNP
rs1404072602 1981 dbSNP
rs1348912386 1983 dbSNP
rs915710600 1984 dbSNP
rs1234396037 1985 dbSNP
rs969908319 1989 dbSNP
rs981326754 1990 dbSNP
rs1041635911 1993 dbSNP
rs1317453127 1996 dbSNP
rs939626050 2001 dbSNP
rs897395218 2004 dbSNP
rs1282857606 2005 dbSNP
rs1037110888 2009 dbSNP
rs1217386245 2013 dbSNP
rs919633778 2016 dbSNP
rs931051672 2017 dbSNP
rs1477976151 2028 dbSNP
rs1372157743 2029 dbSNP
rs1260925557 2030 dbSNP
rs1049527396 2031 dbSNP
rs994866610 2037 dbSNP
rs1269854298 2047 dbSNP
rs1271527783 2048 dbSNP
rs1468403865 2049 dbSNP
rs1271426820 2052 dbSNP
rs373202892 2053 dbSNP
rs1220533426 2061 dbSNP
rs1340091548 2071 dbSNP
rs555980098 2072 dbSNP
rs1225452993 2086 dbSNP
rs561731476 2087 dbSNP
rs1481018885 2095 dbSNP
rs952655890 2097 dbSNP
rs1012266371 2099 dbSNP
rs1023702573 2102 dbSNP
rs971244323 2103 dbSNP
rs1440159622 2107 dbSNP
rs1392185092 2111 dbSNP
rs1406494380 2113 dbSNP
rs1402497993 2114 dbSNP
rs1159971478 2117 dbSNP
rs1165815682 2120 dbSNP
rs1478794274 2125 dbSNP
rs745374916 2129 dbSNP
rs1422999576 2132 dbSNP
rs531462483 2137 dbSNP
rs1454270491 2139 dbSNP
rs928493037 2145 dbSNP
rs866882316 2147 dbSNP
rs376705198 2152 dbSNP
rs772076290 2153 dbSNP
rs1438484454 2154 dbSNP
rs914499138 2160 dbSNP
rs138196911 2164 dbSNP
rs1347388679 2165 dbSNP
rs1405399954 2170 dbSNP
rs1278871504 2183 dbSNP
rs1233308385 2184 dbSNP
rs1368428883 2186 dbSNP
rs370437522 2188 dbSNP
rs1311409558 2192 dbSNP
rs1032754682 2196 dbSNP
rs1224936230 2198 dbSNP
rs1334711436 2200 dbSNP
rs1326244705 2201 dbSNP
rs1415885478 2206 dbSNP
rs1375668993 2213 dbSNP
rs1172572425 2219 dbSNP
rs1463657296 2220 dbSNP
rs893830929 2223 dbSNP
rs1307130000 2224 dbSNP
rs184005593 2227 dbSNP
rs1179731179 2228 dbSNP
rs910960235 2229 dbSNP
rs943815932 2230 dbSNP
rs1210389257 2231 dbSNP
rs1345493898 2233 dbSNP
rs529302026 2235 dbSNP
rs1490611119 2236 dbSNP
rs1277326628 2237 dbSNP
rs969855425 2239 dbSNP
rs981274377 2245 dbSNP
rs1035570916 2247 dbSNP
rs1223314834 2251 dbSNP
rs961274791 2261 dbSNP
rs547844279 2262 dbSNP
rs1161724324 2263 dbSNP
rs930135484 2268 dbSNP
rs34290149 2269 dbSNP
rs397800411 2269 dbSNP
rs1476245053 2282 dbSNP
rs1484796945 2282 dbSNP
rs35979886 2282 dbSNP
rs869027447 2282 dbSNP
rs187445424 2283 dbSNP
rs1384700945 2284 dbSNP
rs1316060861 2285 dbSNP
rs112927630 2286 dbSNP
rs1229924938 2287 dbSNP
rs370589752 2287 dbSNP
rs1442936614 2288 dbSNP
rs985592274 2289 dbSNP
rs373904369 2290 dbSNP
rs910975571 2290 dbSNP
rs1165697567 2291 dbSNP
rs386810039 2293 dbSNP
rs397766926 2293 dbSNP
rs1019887811 2294 dbSNP
rs1344935140 2294 dbSNP
rs1164298686 2296 dbSNP
rs1227738420 2296 dbSNP
rs1366494766 2301 dbSNP
rs1474382962 2301 dbSNP
rs1425040482 2303 dbSNP
rs1327982066 2306 dbSNP
rs1352653107 2311 dbSNP
rs1444325796 2316 dbSNP
rs1279577317 2322 dbSNP
rs1215527017 2343 dbSNP
rs145919487 2344 dbSNP
rs1272050157 2347 dbSNP
rs1243229448 2349 dbSNP
rs1230933847 2355 dbSNP
rs551964262 2360 dbSNP
rs1316689184 2364 dbSNP
rs1048647926 2365 dbSNP
rs1213573006 2369 dbSNP
rs188689029 2372 dbSNP
rs1214307449 2373 dbSNP
rs1012237028 2376 dbSNP
rs1459949705 2377 dbSNP
rs1024085725 2383 dbSNP
rs1356318887 2384 dbSNP
rs935563884 2397 dbSNP
rs1428122468 2401 dbSNP
rs1054070550 2403 dbSNP
rs906610673 2406 dbSNP
rs1454504258 2407 dbSNP
rs537318637 2415 dbSNP
rs1211699442 2426 dbSNP
rs1481341206 2427 dbSNP
rs1440002931 2428 dbSNP
rs1205840474 2429 dbSNP
rs1305400568 2431 dbSNP
rs1243138178 2435 dbSNP
rs1004078106 2440 dbSNP
rs1272924653 2447 dbSNP
rs1372103577 2452 dbSNP
rs1031090149 2458 dbSNP
rs1185554149 2459 dbSNP
rs1023684689 2461 dbSNP
rs556041995 2464 dbSNP
rs1298811468 2467 dbSNP
rs956034663 2486 dbSNP
rs1461722981 2489 dbSNP
rs1175684608 2492 dbSNP
rs570328481 2492 dbSNP
rs1435136278 2496 dbSNP
rs1394198902 2500 dbSNP
rs1191719327 2504 dbSNP
rs574287440 2506 dbSNP
rs535410972 2507 dbSNP
rs1417149746 2510 dbSNP
rs1411530589 2511 dbSNP
rs1035518350 2514 dbSNP
rs1479338857 2516 dbSNP
rs1331953709 2517 dbSNP
rs1282029151 2518 dbSNP
rs1211112291 2519 dbSNP
rs1405322816 2520 dbSNP
rs780551116 2523 dbSNP
rs1280041002 2524 dbSNP
rs961257038 2535 dbSNP
rs1231761679 2539 dbSNP
rs553401115 2541 dbSNP
rs571801013 2542 dbSNP
rs879303945 2545 dbSNP
rs973034792 2548 dbSNP
rs1026924997 2555 dbSNP
rs952444506 2561 dbSNP
rs943719846 2562 dbSNP
rs181423905 2563 dbSNP
rs918355361 2566 dbSNP
rs760762877 2567 dbSNP
rs1048618048 2582 dbSNP
rs563889004 2589 dbSNP
rs888689130 2593 dbSNP
rs763767654 2594 dbSNP
rs576204761 2595 dbSNP
rs906490102 2596 dbSNP
rs1003557007 2607 dbSNP
rs1215581972 2610 dbSNP
rs1199104322 2615 dbSNP
rs138845871 2619 dbSNP
rs776541007 2638 dbSNP
rs761895262 2641 dbSNP
rs1021446417 2643 dbSNP
rs1234203167 2645 dbSNP
rs894059074 2646 dbSNP
rs149307141 2649 dbSNP
rs1191315011 2651 dbSNP
rs1332370728 2655 dbSNP
rs985739637 2657 dbSNP
rs1018198854 2667 dbSNP
rs533232656 2671 dbSNP
rs1383713535 2673 dbSNP
rs1244124969 2674 dbSNP
rs1045078273 2681 dbSNP
rs1455558955 2686 dbSNP
rs1476264962 2692 dbSNP
rs1171172903 2696 dbSNP
rs1419446591 2702 dbSNP
rs1165009756 2704 dbSNP
rs965388094 2707 dbSNP
rs906569078 2708 dbSNP
rs371105678 2710 dbSNP
rs34527214 2712 dbSNP
rs398034899 2712 dbSNP
rs1468185067 2713 dbSNP
rs1480208243 2714 dbSNP
rs200412463 2714 dbSNP
rs918313871 2717 dbSNP
rs1262838813 2719 dbSNP
rs144722102 2726 dbSNP
rs1381227077 2736 dbSNP
rs1463931047 2739 dbSNP
rs1315770332 2743 dbSNP
rs1327878634 2744 dbSNP
rs371543609 2745 dbSNP
rs1334163672 2746 dbSNP
rs34228936 2747 dbSNP
rs765531088 2750 dbSNP
rs984281409 2754 dbSNP
rs533419382 2762 dbSNP
rs1294552491 2763 dbSNP
rs1432897853 2764 dbSNP
rs567021699 2767 dbSNP
rs1326413475 2768 dbSNP
rs1283080359 2774 dbSNP
rs1006802658 2775 dbSNP
rs373950436 2791 dbSNP
rs374496531 2791 dbSNP
rs751565262 2791 dbSNP
rs754627559 2803 dbSNP
rs1225904562 2809 dbSNP
rs1447983187 2811 dbSNP
rs965044119 2816 dbSNP
rs1194763634 2820 dbSNP
rs1263766811 2823 dbSNP
rs1287789378 2838 dbSNP
rs1197820307 2839 dbSNP
rs1350043697 2843 dbSNP
rs778389714 2849 dbSNP
rs1461520156 2860 dbSNP
rs750439762 2871 dbSNP
rs758490231 2881 dbSNP
rs747723904 2882 dbSNP
rs910090656 2884 dbSNP
rs551384327 2888 dbSNP
rs1340325025 2889 dbSNP
rs1250610343 2893 dbSNP
rs1225903038 2895 dbSNP
rs1372856076 2896 dbSNP
rs1304093629 2902 dbSNP
rs948207555 2909 dbSNP
rs1440048128 2921 dbSNP
rs1328889486 2922 dbSNP
rs1203532319 2923 dbSNP
rs1395342151 2931 dbSNP
rs1286567807 2934 dbSNP
rs976441510 2945 dbSNP
rs1194049795 2947 dbSNP
rs1194860469 2951 dbSNP
rs551927490 2952 dbSNP
rs923732592 2953 dbSNP
rs1184068643 2954 dbSNP
rs928251904 2957 dbSNP
rs1201495473 2960 dbSNP
rs1250111723 2962 dbSNP
rs1203222205 2969 dbSNP
rs1349843816 2970 dbSNP
rs1378188549 2980 dbSNP
rs1280740718 2983 dbSNP
rs989671871 2984 dbSNP
rs1281154227 2985 dbSNP
rs1342768650 2985 dbSNP
rs570117086 2990 dbSNP
rs537637041 2998 dbSNP
rs1386631558 3001 dbSNP
rs1305824139 3019 dbSNP
rs1416221613 3021 dbSNP
rs1377695555 3022 dbSNP
rs948326622 3027 dbSNP
rs549341411 3030 dbSNP
rs1423705282 3031 dbSNP
rs766509045 3043 dbSNP
rs1470564056 3046 dbSNP
rs1411298122 3047 dbSNP
rs1010981942 3050 dbSNP
rs1180339355 3051 dbSNP
rs1364109799 3051 dbSNP
rs1407219557 3062 dbSNP
rs1258031562 3063 dbSNP
rs1209180446 3068 dbSNP
rs1043790818 3069 dbSNP
rs374674658 3071 dbSNP
rs569506372 3071 dbSNP
rs1224224352 3074 dbSNP
rs927935262 3082 dbSNP
rs569963275 3093 dbSNP
rs1234826894 3097 dbSNP
rs535050600 3099 dbSNP
rs1311841404 3101 dbSNP
rs1018584192 3103 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B HITS-CLIP data was present in Chi_ControlA_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control A HITS-CLIP data was present in Chi_ControlB_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000427476.1 | 3UTR | CGGAGCUGCCCCGCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000427476.1 | 3UTR | CGGAGCUGCCCCGCCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset Chi_ControlA_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control A
Location of target site ENST00000427476.1 | 3UTR | CGGAGCUGCCCCGCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset Chi_ControlB_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control B
Location of target site ENST00000427476.1 | 3UTR | CGGAGCUGCCCCGCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.566 4.6e-3 -0.663 7.2e-4 20 Click to see details
GSE28544 Breast cancer 0.458 1.2e-2 0.582 1.4e-3 24 Click to see details
GSE21687 Ependynoma primary tumors 0.253 2.2e-2 0.243 2.7e-2 64 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.643 3.1e-2 0.517 7.7e-2 9 Click to see details
GSE42095 Differentiated embryonic stem cells 0.312 7.4e-2 0.259 1.2e-1 23 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.199 1.7e-1 0.112 3.0e-1 25 Click to see details
GSE28260 Renal cortex and medulla 0.17 2.9e-1 0.242 2.1e-1 13 Click to see details
GSE19350 CNS germ cell tumors 0.164 3.1e-1 -0.056 4.3e-1 12 Click to see details
GSE19783 ER- ER- breast cancer -0.053 3.2e-1 -0.033 3.9e-1 79 Click to see details
GSE26953 Aortic valvular endothelial cells 0.093 3.3e-1 0.122 2.9e-1 24 Click to see details
GSE19536 Breast cancer -0.034 3.7e-1 0.026 4.0e-1 100 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.063 3.8e-1 -0.152 2.3e-1 25 Click to see details
GSE21032 Prostate cancer -0.032 3.9e-1 -0.015 4.5e-1 83 Click to see details
GSE32688 Pancreatic cancer -0.048 4.0e-1 -0.051 3.9e-1 32 Click to see details
GSE38226 Liver fibrosis 0.028 4.5e-1 0.081 3.6e-1 21 Click to see details
GSE19783 ER+ ER+ breast cancer 0.028 4.5e-1 0.189 2.1e-1 20 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC 0.262 0.05 0.170 0.14 42 Click to see details
BLCA 0.373 0.06 0.490 0.02 18 Click to see details
KIRC -0.173 0.08 -0.201 0.05 68 Click to see details
THCA -0.17 0.1 -0.154 0.12 59 Click to see details
LUAD 0.356 0.13 0.420 0.09 12 Click to see details
PCPG -0.89 0.15 -0.500 0.33 3 Click to see details
BRCA 0.113 0.15 0.153 0.08 84 Click to see details
PAAD -0.652 0.17 -0.800 0.1 4 Click to see details
KIRP -0.157 0.2 -0.214 0.12 32 Click to see details
LUSC -0.116 0.24 -0.138 0.2 38 Click to see details
KICH -0.118 0.29 -0.048 0.41 25 Click to see details
ESCA -0.159 0.32 -0.245 0.23 11 Click to see details
CESC 0.475 0.34 0.500 0.33 3 Click to see details
STAD -0.068 0.36 -0.067 0.36 32 Click to see details
PRAD 0.043 0.38 0.061 0.34 50 Click to see details
COAD -0.12 0.39 -0.381 0.18 8 Click to see details
LIHC -0.024 0.43 -0.014 0.46 49 Click to see details
UCEC 0.034 0.45 0.035 0.44 19 Click to see details
CHOL 0.005 0.49 -0.150 0.35 9 Click to see details
CHOL 0.005 0.49 -0.150 0.35 9 Click to see details
CHOL 0.005 0.49 -0.150 0.35 9 Click to see details
412 hsa-miR-744-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT016085 ARL15 ADP ribosylation factor like GTPase 15 1 1
MIRT016086 AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 1 2
MIRT016087 PPTC7 PTC7 protein phosphatase homolog 2 3
MIRT016088 RASSF1 Ras association domain family member 1 1 1
MIRT016089 IER5 immediate early response 5 1 1
MIRT037383 UFC1 ubiquitin-fold modifier conjugating enzyme 1 1 1
MIRT037384 STAM2 signal transducing adaptor molecule 2 1 1
MIRT037385 SRRM2 serine/arginine repetitive matrix 2 1 1
MIRT037386 DCXR dicarbonyl and L-xylulose reductase 1 1
MIRT037387 TSPAN17 tetraspanin 17 1 1
MIRT037388 ACTB actin beta 1 1
MIRT037389 HIST1H2BC histone cluster 1 H2B family member c 1 1
MIRT037390 ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 1 1
MIRT037391 VDAC1 voltage dependent anion channel 1 1 1
MIRT037392 RNASEK ribonuclease K 1 1
MIRT037393 CDK16 cyclin dependent kinase 16 1 1
MIRT037394 ZCCHC24 zinc finger CCHC-type containing 24 1 1
MIRT037395 ARRDC2 arrestin domain containing 2 1 1
MIRT037396 SGMS1 sphingomyelin synthase 1 1 1
MIRT037397 HSPD1 heat shock protein family D (Hsp60) member 1 1 1
MIRT037398 MRPL46 mitochondrial ribosomal protein L46 1 1
MIRT037399 RHEB Ras homolog, mTORC1 binding 1 1
MIRT037400 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT037401 TP53I13 tumor protein p53 inducible protein 13 1 1
MIRT037402 CD44 CD44 molecule (Indian blood group) 1 1
MIRT037403 USP12 ubiquitin specific peptidase 12 1 1
MIRT037404 AP2B1 adaptor related protein complex 2 beta 1 subunit 1 1
MIRT037405 RPL18A ribosomal protein L18a 1 1
MIRT037406 PPP1CA protein phosphatase 1 catalytic subunit alpha 1 1
MIRT037407 TNRC6B trinucleotide repeat containing 6B 1 1
MIRT037408 PXK PX domain containing serine/threonine kinase like 1 1
MIRT037409 TDRKH tudor and KH domain containing 1 1
MIRT037410 PRRC2A proline rich coiled-coil 2A 1 1
MIRT037411 ATP11A ATPase phospholipid transporting 11A 1 1
MIRT037412 NDE1 nudE neurodevelopment protein 1 1 1
MIRT037413 STK16 serine/threonine kinase 16 1 1
MIRT037414 PSMB2 proteasome subunit beta 2 1 1
MIRT037415 EPN1 epsin 1 1 1
MIRT037416 EN2 engrailed homeobox 2 1 1
MIRT037417 LARP1 La ribonucleoprotein domain family member 1 1 1
MIRT037418 SRCAP Snf2 related CREBBP activator protein 1 1
MIRT037419 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 1 1
MIRT037420 AP2A2 adaptor related protein complex 2 alpha 2 subunit 1 1
MIRT037421 ACTG1 actin gamma 1 1 1
MIRT037422 PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing 1 1
MIRT037423 UBE2O ubiquitin conjugating enzyme E2 O 1 1
MIRT037424 KLHL15 kelch like family member 15 1 1
MIRT037425 SECISBP2 SECIS binding protein 2 1 1
MIRT037426 KIAA0922 transmembrane 131 like 1 1
MIRT037427 PTMA prothymosin, alpha 1 1
MIRT037428 WDR45B WD repeat domain 45B 1 1
MIRT037429 ZNF282 zinc finger protein 282 1 1
MIRT037430 GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 1 1
MIRT037431 TNKS tankyrase 1 1
MIRT037432 NOP2 NOP2 nucleolar protein 1 1
MIRT037433 GAK cyclin G associated kinase 1 1
MIRT037434 ATP6 ATP synthase F0 subunit 6 1 1
MIRT037435 DIDO1 death inducer-obliterator 1 1 1
MIRT037436 RPL3 ribosomal protein L3 1 1
MIRT037437 AIMP2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 1 1
MIRT037438 PIGC phosphatidylinositol glycan anchor biosynthesis class C 1 1
MIRT037439 ARHGEF2 Rho/Rac guanine nucleotide exchange factor 2 1 1
MIRT037440 USP21 ubiquitin specific peptidase 21 1 1
MIRT037441 NUFIP2 NUFIP2, FMR1 interacting protein 2 1 1
MIRT037442 RPS6 ribosomal protein S6 1 1
MIRT037443 ILKAP ILK associated serine/threonine phosphatase 1 1
MIRT037444 COX1 cytochrome c oxidase subunit I 1 1
MIRT037445 VPS37C VPS37C, ESCRT-I subunit 1 1
MIRT037446 CDK12 cyclin dependent kinase 12 1 1
MIRT037447 RBM8A RNA binding motif protein 8A 1 1
MIRT037448 CKB creatine kinase B 1 1
MIRT037449 DHX57 DExH-box helicase 57 1 1
MIRT037450 DDX23 DEAD-box helicase 23 1 1
MIRT037451 ABI3 ABI family member 3 1 1
MIRT037452 GATAD2B GATA zinc finger domain containing 2B 1 1
MIRT037453 PDPK1 3-phosphoinositide dependent protein kinase 1 1 1
MIRT037454 C17orf70 Fanconi anemia core complex associated protein 100 1 1
MIRT037455 SKI SKI proto-oncogene 1 1
MIRT037456 KCTD11 potassium channel tetramerization domain containing 11 1 1
MIRT037457 GNB2L1 receptor for activated C kinase 1 1 1
MIRT037458 NCOA3 nuclear receptor coactivator 3 1 1
MIRT037459 PAK4 p21 (RAC1) activated kinase 4 2 3
MIRT037460 GDI2 GDP dissociation inhibitor 2 1 1
MIRT037461 SLC2A4RG SLC2A4 regulator 1 1
MIRT037462 SLX4 SLX4 structure-specific endonuclease subunit 1 1
MIRT037463 COPA coatomer protein complex subunit alpha 1 1
MIRT037464 GPRASP2 G protein-coupled receptor associated sorting protein 2 1 1
MIRT037465 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 1 1
MIRT037466 LIMS1 LIM zinc finger domain containing 1 1 1
MIRT037467 COTL1 coactosin like F-actin binding protein 1 1 1
MIRT037468 CAPNS1 calpain small subunit 1 1 1
MIRT037469 FRZB frizzled-related protein 1 1
MIRT037470 UBQLN4 ubiquilin 4 1 1
MIRT037471 NUP153 nucleoporin 153 1 1
MIRT037472 TMEM175 transmembrane protein 175 1 1
MIRT037473 HIST1H2BD histone cluster 1 H2B family member d 1 1
MIRT037474 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT037475 BCL2L12 BCL2 like 12 1 1
MIRT037476 HIST2H2AA3 histone cluster 2 H2A family member a3 1 1
MIRT037477 MINK1 misshapen like kinase 1 1 1
MIRT037478 PDXK pyridoxal kinase 1 1
MIRT037479 FAM110A family with sequence similarity 110 member A 1 1
MIRT037480 ZNF598 zinc finger protein 598 1 1
MIRT037481 ILK integrin linked kinase 1 1
MIRT037482 HINT1 histidine triad nucleotide binding protein 1 1 1
MIRT037483 WBP2 WW domain binding protein 2 1 1
MIRT037484 CYTB cytochrome b 1 1
MIRT037485 SCAMP2 secretory carrier membrane protein 2 1 1
MIRT037486 TRIM33 tripartite motif containing 33 1 1
MIRT037487 SLC25A3 solute carrier family 25 member 3 1 1
MIRT037488 IRS4 insulin receptor substrate 4 1 1
MIRT037489 TSR1 TSR1, ribosome maturation factor 1 1
MIRT037490 TCOF1 treacle ribosome biogenesis factor 1 1 1
MIRT037491 ATXN2L ataxin 2 like 1 1
MIRT037492 MTOR mechanistic target of rapamycin kinase 1 1
MIRT037493 ZNF318 zinc finger protein 318 1 1
MIRT037494 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 3
MIRT037495 SAMD4B sterile alpha motif domain containing 4B 1 1
MIRT037496 STMN1 stathmin 1 1 1
MIRT037497 SAT1 spermidine/spermine N1-acetyltransferase 1 1 1
MIRT037498 SALL1 spalt like transcription factor 1 1 1
MIRT037499 ZSCAN18 zinc finger and SCAN domain containing 18 1 1
MIRT037500 SLC35D1 solute carrier family 35 member D1 1 1
MIRT037501 TM9SF3 transmembrane 9 superfamily member 3 1 1
MIRT037502 TIAM1 T-cell lymphoma invasion and metastasis 1 1 1
MIRT037503 CHD5 chromodomain helicase DNA binding protein 5 1 1
MIRT037504 BAG6 BCL2 associated athanogene 6 1 1
MIRT037505 MED28 mediator complex subunit 28 1 1
MIRT037506 ANKRD52 ankyrin repeat domain 52 1 1
MIRT037507 MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 1 1
MIRT037508 PPDPF pancreatic progenitor cell differentiation and proliferation factor 1 1
MIRT037509 PRKACA protein kinase cAMP-activated catalytic subunit alpha 1 1
MIRT037510 HPCAL4 hippocalcin like 4 1 1
MIRT037511 ZNF256 zinc finger protein 256 1 1
MIRT037512 CGNL1 cingulin like 1 1 1
MIRT037513 TUBA1B tubulin alpha 1b 1 1
MIRT037514 LNPEP leucyl and cystinyl aminopeptidase 1 1
MIRT037515 PDE4A phosphodiesterase 4A 1 1
MIRT037516 HOXD11 homeobox D11 2 3
MIRT037517 QARS glutaminyl-tRNA synthetase 1 1
MIRT037518 G3BP1 G3BP stress granule assembly factor 1 1 1
MIRT037519 PLEKHM2 pleckstrin homology and RUN domain containing M2 1 1
MIRT037520 POLR2A RNA polymerase II subunit A 1 1
MIRT037521 KIAA1462 junctional cadherin 5 associated 1 1
MIRT037522 SF3A1 splicing factor 3a subunit 1 1 1
MIRT037523 YBX1 Y-box binding protein 1 1 1
MIRT037524 PTGES3 prostaglandin E synthase 3 1 1
MIRT037525 FOXO3 forkhead box O3 1 1
MIRT037526 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 1 1
MIRT037527 AARS alanyl-tRNA synthetase 1 1
MIRT037528 ZNF155 zinc finger protein 155 1 1
MIRT037529 NCS1 neuronal calcium sensor 1 1 1
MIRT037530 FKBP4 FK506 binding protein 4 1 1
MIRT037531 ARHGDIA Rho GDP dissociation inhibitor alpha 1 1
MIRT037532 MAPK7 mitogen-activated protein kinase 7 1 1
MIRT037533 AGPAT2 1-acylglycerol-3-phosphate O-acyltransferase 2 1 1
MIRT037534 HIST1H1E histone cluster 1 H1 family member e 1 1
MIRT037535 MLF2 myeloid leukemia factor 2 1 1
MIRT037536 EDC3 enhancer of mRNA decapping 3 1 1
MIRT037537 CHRAC1 chromatin accessibility complex 1 1 1
MIRT037538 WIPF3 WAS/WASL interacting protein family member 3 1 1
MIRT037539 COX2 cytochrome c oxidase subunit II 1 1
MIRT037540 SRSF1 serine and arginine rich splicing factor 1 1 1
MIRT037541 CTNNBIP1 catenin beta interacting protein 1 1 1
MIRT037542 RPL4 ribosomal protein L4 1 1
MIRT037543 COX3 cytochrome c oxidase III 1 1
MIRT037544 DDX54 DEAD-box helicase 54 1 1
MIRT037545 TOB2 transducer of ERBB2, 2 1 1
MIRT037546 MAN2C1 mannosidase alpha class 2C member 1 1 1
MIRT037547 SMCR7L mitochondrial elongation factor 1 1 1
MIRT037548 RPLP1 ribosomal protein lateral stalk subunit P1 1 1
MIRT037549 RAN RAN, member RAS oncogene family 1 1
MIRT037550 NONO non-POU domain containing octamer binding 1 1
MIRT037551 CYB5R3 cytochrome b5 reductase 3 1 1
MIRT037552 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 1 1
MIRT037553 COLGALT1 collagen beta(1-O)galactosyltransferase 1 1 1
MIRT037554 MGRN1 mahogunin ring finger 1 1 1
MIRT037555 ANAPC1 anaphase promoting complex subunit 1 1 1
MIRT037556 TBX1 T-box 1 1 1
MIRT037557 NXPH4 neurexophilin 4 1 1
MIRT037558 HSPA1B heat shock protein family A (Hsp70) member 1B 1 1
MIRT037559 UBE2A ubiquitin conjugating enzyme E2 A 1 1
MIRT037560 KPNB1 karyopherin subunit beta 1 1 1
MIRT037561 NDUFB10 NADH:ubiquinone oxidoreductase subunit B10 1 1
MIRT037562 SYMPK symplekin 1 1
MIRT037563 SYPL1 synaptophysin like 1 1 1
MIRT037564 LRP3 LDL receptor related protein 3 1 1
MIRT037565 DDX24 DEAD-box helicase 24 1 1
MIRT037566 WDR37 WD repeat domain 37 1 1
MIRT037567 RPS14 ribosomal protein S14 1 1
MIRT037568 FAM53C family with sequence similarity 53 member C 1 1
MIRT037569 NMT1 N-myristoyltransferase 1 1 1
MIRT037570 PAGR1 PAXIP1 associated glutamate rich protein 1 1 1
MIRT037571 AKT2 AKT serine/threonine kinase 2 1 1
MIRT037572 TMEM14C transmembrane protein 14C 1 1
MIRT037573 MEX3D mex-3 RNA binding family member D 1 1
MIRT037574 BRAF B-Raf proto-oncogene, serine/threonine kinase 1 1
MIRT037575 POLR2L RNA polymerase II subunit L 1 1
MIRT037576 SERP1 stress associated endoplasmic reticulum protein 1 1 1
MIRT037577 C8orf33 chromosome 8 open reading frame 33 1 1
MIRT037578 NR1D2 nuclear receptor subfamily 1 group D member 2 1 1
MIRT037579 POLD3 DNA polymerase delta 3, accessory subunit 1 1
MIRT037580 HMGA1 high mobility group AT-hook 1 1 1
MIRT037581 SLC35B4 solute carrier family 35 member B4 1 1
MIRT037582 PELP1 proline, glutamate and leucine rich protein 1 1 1
MIRT037583 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 1 1
MIRT037584 RPL7A ribosomal protein L7a 1 1
MIRT037585 LAIR1 leukocyte associated immunoglobulin like receptor 1 1 1
MIRT037586 RPL10 ribosomal protein L10 1 1
MIRT037587 MRPS16 mitochondrial ribosomal protein S16 1 1
MIRT037588 SRM spermidine synthase 1 1
MIRT037589 EIF3K eukaryotic translation initiation factor 3 subunit K 1 1
MIRT037590 DESI1 desumoylating isopeptidase 1 1 1
MIRT037591 BET1 Bet1 golgi vesicular membrane trafficking protein 1 1
MIRT037592 HTRA2 HtrA serine peptidase 2 1 1
MIRT037593 LARP6 La ribonucleoprotein domain family member 6 1 1
MIRT037594 NOTCH2 notch 2 1 1
MIRT037595 ADCY9 adenylate cyclase 9 1 1
MIRT037596 C6orf62 chromosome 6 open reading frame 62 1 1
MIRT037597 FBXL19 F-box and leucine rich repeat protein 19 1 1
MIRT037598 L3MBTL2 L3MBTL2, polycomb repressive complex 1 subunit 1 1
MIRT037599 TRIM28 tripartite motif containing 28 1 1
MIRT037600 LGALS3 galectin 3 1 1
MIRT037601 IGSF8 immunoglobulin superfamily member 8 1 1
MIRT037602 LIN37 lin-37 DREAM MuvB core complex component 1 1
MIRT037603 PTPRF protein tyrosine phosphatase, receptor type F 1 1
MIRT037604 MTSS1L MTSS1L, I-BAR domain containing 1 1
MIRT037605 TRMT2A tRNA methyltransferase 2 homolog A 1 1
MIRT037606 DVL1 dishevelled segment polarity protein 1 1 1
MIRT037607 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 1 1
MIRT037608 TOR2A torsin family 2 member A 1 1
MIRT037609 RPS6KA5 ribosomal protein S6 kinase A5 1 1
MIRT037610 SMYD4 SET and MYND domain containing 4 1 1
MIRT037611 TJAP1 tight junction associated protein 1 1 1
MIRT037612 IRAK1 interleukin 1 receptor associated kinase 1 1 1
MIRT037613 PPM1M protein phosphatase, Mg2+/Mn2+ dependent 1M 1 1
MIRT037614 EIF4A2 eukaryotic translation initiation factor 4A2 1 1
MIRT037615 GFER growth factor, augmenter of liver regeneration 1 1
MIRT037616 PKP2 plakophilin 2 1 1
MIRT037617 FARSB phenylalanyl-tRNA synthetase beta subunit 1 1
MIRT037618 OPRD1 opioid receptor delta 1 1 1
MIRT037619 CCNY cyclin Y 1 1
MIRT037620 CNOT1 CCR4-NOT transcription complex subunit 1 1 1
MIRT037621 CXCL16 C-X-C motif chemokine ligand 16 1 1
MIRT037622 CEBPA CCAAT/enhancer binding protein alpha 1 1
MIRT037623 DDX11 DEAD/H-box helicase 11 1 1
MIRT037624 URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) 1 1
MIRT037625 SBF1 SET binding factor 1 1 1
MIRT037626 GNB2 G protein subunit beta 2 1 1
MIRT037627 KMT2D lysine methyltransferase 2D 2 3
MIRT037628 DDX17 DEAD-box helicase 17 1 1
MIRT037629 SORBS3 sorbin and SH3 domain containing 3 1 1
MIRT037630 TAPBP TAP binding protein 1 1
MIRT037631 BCR BCR, RhoGEF and GTPase activating protein 1 1
MIRT037632 RPL18 ribosomal protein L18 1 1
MIRT037633 INTS3 integrator complex subunit 3 1 1
MIRT037634 CDC25B cell division cycle 25B 1 1
MIRT037635 LDOC1L retrotransposon Gag like 6 1 1
MIRT037636 TUB tubby bipartite transcription factor 1 1
MIRT037637 NUDT2 nudix hydrolase 2 1 1
MIRT037638 CDAN1 codanin 1 1 1
MIRT037639 MRS2 MRS2, magnesium transporter 1 1
MIRT037640 PYGB glycogen phosphorylase B 1 1
MIRT037641 LDLRAD3 low density lipoprotein receptor class A domain containing 3 1 1
MIRT037642 COL5A1 collagen type V alpha 1 chain 1 1
MIRT037643 ATF7IP activating transcription factor 7 interacting protein 1 1
MIRT037644 AGO1 argonaute 1, RISC catalytic component 1 1
MIRT037645 ZNF212 zinc finger protein 212 1 1
MIRT037646 TSC2 TSC complex subunit 2 1 1
MIRT037647 FASN fatty acid synthase 1 1
MIRT037648 NOL9 nucleolar protein 9 1 1
MIRT037649 CLUH clustered mitochondria homolog 1 1
MIRT037650 PHF8 PHD finger protein 8 1 1
MIRT037651 EIF4G1 eukaryotic translation initiation factor 4 gamma 1 1 1
MIRT037652 TRAPPC12 trafficking protein particle complex 12 1 1
MIRT037653 HOXC11 homeobox C11 1 1
MIRT037654 DGCR14 ess-2 splicing factor homolog 1 1
MIRT037655 SLC25A1 solute carrier family 25 member 1 1 1
MIRT037656 MEX3C mex-3 RNA binding family member C 1 1
MIRT037657 RAI1 retinoic acid induced 1 1 1
MIRT037658 LY6E lymphocyte antigen 6 family member E 1 1
MIRT037659 SEC16A SEC16 homolog A, endoplasmic reticulum export factor 1 1
MIRT037660 RPL37 ribosomal protein L37 1 1
MIRT037661 CNN2 calponin 2 1 1
MIRT037662 ALDH18A1 aldehyde dehydrogenase 18 family member A1 1 1
MIRT037663 POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) 1 1
MIRT037664 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT037665 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 1 1
MIRT037666 PTPMT1 protein tyrosine phosphatase, mitochondrial 1 1 1
MIRT037667 NCEH1 neutral cholesterol ester hydrolase 1 1 1
MIRT037668 ART5 ADP-ribosyltransferase 5 1 1
MIRT037669 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT037670 NCL nucleolin 1 1
MIRT037671 NCKAP5L NCK associated protein 5 like 1 1
MIRT037672 ZCCHC14 zinc finger CCHC-type containing 14 1 1
MIRT037673 CCDC71 coiled-coil domain containing 71 1 1
MIRT037674 SURF4 surfeit 4 1 1
MIRT037675 RPL13 ribosomal protein L13 1 1
MIRT037676 ACTN4 actinin alpha 4 1 1
MIRT037677 PA2G4 proliferation-associated 2G4 1 1
MIRT037678 MIF macrophage migration inhibitory factor 1 1
MIRT037679 UBE2N ubiquitin conjugating enzyme E2 N 1 1
MIRT037680 LYNX1 Ly6/neurotoxin 1 1 1
MIRT037681 TACC3 transforming acidic coiled-coil containing protein 3 1 1
MIRT037682 GSR glutathione-disulfide reductase 1 1
MIRT037683 GSK3A glycogen synthase kinase 3 alpha 1 1
MIRT037684 ZMYM3 zinc finger MYM-type containing 3 1 1
MIRT037685 ERP29 endoplasmic reticulum protein 29 1 1
MIRT037686 MATR3 matrin 3 1 1
MIRT037687 FANCG Fanconi anemia complementation group G 1 1
MIRT037688 FAM83G family with sequence similarity 83 member G 1 1
MIRT037689 DUSP18 dual specificity phosphatase 18 1 1
MIRT037690 MYC MYC proto-oncogene, bHLH transcription factor 3 2
MIRT037691 TSPAN7 tetraspanin 7 1 1
MIRT037692 ATMIN ATM interactor 1 1
MIRT037693 SEPT2 septin 2 1 1
MIRT037694 FOXRED2 FAD dependent oxidoreductase domain containing 2 1 1
MIRT037695 TECR trans-2,3-enoyl-CoA reductase 1 1
MIRT037696 MRPL11 mitochondrial ribosomal protein L11 1 1
MIRT037697 IP6K1 inositol hexakisphosphate kinase 1 1 1
MIRT037698 PSMD4 proteasome 26S subunit, non-ATPase 4 1 1
MIRT037699 SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 1 1
MIRT037700 CTNNB1 catenin beta 1 1 1
MIRT037701 TMEM189 transmembrane protein 189 1 1
MIRT037702 LDLR low density lipoprotein receptor 1 1
MIRT037703 OGFR opioid growth factor receptor 1 1
MIRT037704 ADAP2 ArfGAP with dual PH domains 2 1 1
MIRT037705 LIPA lipase A, lysosomal acid type 1 1
MIRT037706 SNAPC4 small nuclear RNA activating complex polypeptide 4 1 1
MIRT037707 FBN2 fibrillin 2 1 1
MIRT037708 ZNF704 zinc finger protein 704 1 1
MIRT037709 EIF3M eukaryotic translation initiation factor 3 subunit M 1 1
MIRT037710 SMC1A structural maintenance of chromosomes 1A 1 1
MIRT037711 FZR1 fizzy and cell division cycle 20 related 1 1 1
MIRT037712 NANOS1 nanos C2HC-type zinc finger 1 1 1
MIRT037713 PRR12 proline rich 12 1 1
MIRT037714 PHC2 polyhomeotic homolog 2 1 1
MIRT037715 NOP9 NOP9 nucleolar protein 1 1
MIRT037716 HM13 histocompatibility minor 13 1 1
MIRT037717 PRDX5 peroxiredoxin 5 1 1
MIRT037718 IRGQ immunity related GTPase Q 1 1
MIRT037719 TGFB1 transforming growth factor beta 1 7 2
MIRT037720 MARCH3 membrane associated ring-CH-type finger 3 1 1
MIRT037721 TBX2 T-box 2 1 1
MIRT037722 TSC22D3 TSC22 domain family member 3 1 1
MIRT037723 DUT deoxyuridine triphosphatase 1 1
MIRT037724 FAM171A2 family with sequence similarity 171 member A2 1 1
MIRT037725 FGFR1 fibroblast growth factor receptor 1 1 1
MIRT037726 FRAT1 FRAT1, WNT signaling pathway regulator 1 1
MIRT037727 PSMD11 proteasome 26S subunit, non-ATPase 11 1 1
MIRT037728 PABPC1 poly(A) binding protein cytoplasmic 1 1 1
MIRT037729 ENO1 enolase 1 1 1
MIRT037730 AP3D1 adaptor related protein complex 3 delta 1 subunit 1 1
MIRT037731 TUBA1A tubulin alpha 1a 1 1
MIRT037732 ULK3 unc-51 like kinase 3 1 1
MIRT037733 PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha 1 1
MIRT037734 SLC25A46 solute carrier family 25 member 46 1 1
MIRT037735 MED15 mediator complex subunit 15 1 1
MIRT037736 IRF2BP1 interferon regulatory factor 2 binding protein 1 1 1
MIRT037737 UBA1 ubiquitin like modifier activating enzyme 1 1 1
MIRT037738 ATHL1 protein-glucosylgalactosylhydroxylysine glucosidase 1 1
MIRT037739 CTNNA1 catenin alpha 1 1 1
MIRT037740 ADRM1 adhesion regulating molecule 1 1 1
MIRT037741 CCDC106 coiled-coil domain containing 106 1 1
MIRT054493 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 3 1
MIRT451195 PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 2 2
MIRT452931 DISC1 disrupted in schizophrenia 1 2 2
MIRT455468 LYPLA2 lysophospholipase II 2 2
MIRT457068 TOR4A torsin family 4 member A 2 2
MIRT464195 VGLL4 vestigial like family member 4 2 4
MIRT483030 KHSRP KH-type splicing regulatory protein 2 4
MIRT486062 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT486120 INO80E INO80 complex subunit E 2 2
MIRT486866 DPF1 double PHD fingers 1 2 2
MIRT488343 PAX2 paired box 2 2 2
MIRT488790 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT490249 MFI2 melanotransferrin 2 2
MIRT490264 HAAO 3-hydroxyanthranilate 3,4-dioxygenase 2 2
MIRT490756 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT492321 SETD1B SET domain containing 1B 2 2
MIRT492851 NRGN neurogranin 2 2
MIRT499604 ANKRD45 ankyrin repeat domain 45 2 2
MIRT500189 BARX1 BARX homeobox 1 2 4
MIRT516765 FAM212B family with sequence similarity 212 member B 2 4
MIRT517949 TRIM59 tripartite motif containing 59 2 2
MIRT521182 SCAF4 SR-related CTD associated factor 4 2 2
MIRT526462 OSBPL5 oxysterol binding protein like 5 2 2
MIRT535148 PLEKHG5 pleckstrin homology and RhoGEF domain containing G5 2 2
MIRT569528 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT570593 NFIX nuclear factor I X 2 2
MIRT571219 F2R coagulation factor II thrombin receptor 2 2
MIRT574145 MARVELD1 MARVEL domain containing 1 2 2
MIRT608758 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT649509 RAB17 RAB17, member RAS oncogene family 2 2
MIRT692165 RNF207 ring finger protein 207 2 2
MIRT703495 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT711081 NEUROD2 neuronal differentiation 2 2 2
MIRT712090 UNC13A unc-13 homolog A 2 2
MIRT712531 CYTH2 cytohesin 2 2 2
MIRT712755 GMDS GDP-mannose 4,6-dehydratase 2 2
MIRT712893 TGFA transforming growth factor alpha 2 2
MIRT714684 PRX periaxin 2 2
MIRT714723 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714814 NOB1 NIN1/PSMD8 binding protein 1 homolog 2 2
MIRT716774 C1orf229 chromosome 1 open reading frame 229 2 2
MIRT717511 HRNR hornerin 2 2
MIRT717653 THBS2 thrombospondin 2 2 2
MIRT719595 PIAS4 protein inhibitor of activated STAT 4 2 2
MIRT720525 PTGR2 prostaglandin reductase 2 2 2
MIRT724925 VPS18 VPS18, CORVET/HOPS core subunit 2 2
MIRT737146 NOS3 nitric oxide synthase 3 1 0
MIRT756003 SLC7A5 solute carrier family 7 member 5 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-744 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-744 Tert-butyl hydroperoxide (t-BHP) NULL 6410 Microarray mouse auditory cells 20510889 2010 up-regulated
miR-744 Ursodeoxycholic acid (UDCA) approved 31401 Microarray rat Liver 20689055 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-744 Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC-7901)
hsa-mir-744 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-744 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-744 Fluorouracil 3385 NSC19893 approved resistant cell line (OE19)
hsa-mir-744 Fluorouracil 3385 NSC19893 approved resistant cell line (KYSE)
hsa-mir-744 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-744 Cisplatin 5460033 NSC119875 approved resistant cell line (SGC-7901)
hsa-miR-744-5p [1,1'-binaphthalene]-2,2',3,3'-tetrol 316673 NSC245006 sensitive
hsa-miR-744-5p 4-n-[12-[(5-amino-6-chloropyrimidin-4-yl)amino]dodecyl]-6-chloropyrimidine-4,5-diamine 358989 NSC619196 sensitive
hsa-miR-744-5p 5,7-dibromo-2-[(e)-2-(4-hydroxy-3-methoxyphenyl)ethenyl]quinolin-8-ol 135460261 NSC67090 sensitive
hsa-miR-744-5p Benzyl 2-(dibenzylamino)-3-phenylpropanoate 375616 NSC655438 sensitive
hsa-miR-744-5p N'-[(Z)-[(4Z)-2-(1,3-benzodioxol-5-yl)-4-[[4-oxo-4-[2-(trifluoromethyl)anilino]butanoyl]hydrazinylidene]chromen-3-ylidene]amino]-N-[2-(trifluoromethyl)phenyl]butanediamide 6399328 NSC641210 sensitive
hsa-miR-744-5p Paullone analog 47 396411 NSC702373 sensitive
hsa-miR-744-5p Ursa-11,13(18)-dien-28-oic acid-3.beta.-ol 378695 NSC661747 sensitive
hsa-miR-744-5p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7, LY2)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-miR-744-5p Carboplatin 38904 NSC241240 approved sensitive High Ovarian Cancer tissue and cell line (MDAH-2274, SKOV3)
hsa-miR-744-5p Gefitinib 123631 NSC715055 approved resistant High Lung Adenocarcinoma cell line (A549)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Squamous Cell Carcinoma cell line (KYSE410)
hsa-miR-744-5p Tamoxifen 2733525 NSC180973 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-744-5p Vinorelbine 44424639 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-744-5p Epirubicin 41867 NSC256942 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-744-5p Erlotinib 176870 NSC718781 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-744-5p Gefitinib 123631 NSC715055 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-744-5p Sunitinib 5329102 NSC750690 approved sensitive High Renal Cell Cancer tissue
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-744-5p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (HepG2)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC-7901, BGC-823)
hsa-miR-744-5p Oxaliplatin 6857599 NSC266046 approved resistant Low Colorectal Cancer cell line (HCT-116)
hsa-miR-744-5p Bortezomib 387447 NSC681239 approved sensitive Low Multiple Myeloma tissue
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-744-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-744-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (cytosolic RNA)
hsa-miR-744-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-744-5p Fluorouracil 3385 NSC19893 approved sensitive cell line (HCT15)
hsa-miR-744-5p 4-Hydroxytamoxifen+Tamoxifen sensitive cell line (LY2)
hsa-miR-744-5p Ethanol+Tamoxifen sensitive cell line (LY2)
hsa-miR-744-5p Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-miR-744-5p Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-miR-744-5p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (MDA-231)
hsa-miR-744-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (PC3PR20)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)
hsa-miR-744-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (H23)

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