pre-miRNA Information
pre-miRNA hsa-mir-516b-1   
Genomic Coordinates chr19: 53736845 - 53736934
Synonyms MIRN516-4, MIRN516B-1, MIRN516B1, MIR516B1
Description Homo sapiens miR-516b-1 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-mir-516b-2   
Genomic Coordinates chr19: 53725442 - 53725526
Synonyms MIRN516-3, MIRN516B-2, MIRN516B2, MIR516B2
Description Homo sapiens miR-516b-2 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-516b-3p
Sequence 56| UGCUUCCUUUCAGAGGGU |73
Evidence Experimental
Experiments Array-cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1413434631 1 dbSNP
rs746170707 2 dbSNP
rs1312744198 2 dbSNP
rs752101959 3 dbSNP
rs770077784 4 dbSNP
rs1193425541 6 dbSNP
rs953142850 7 dbSNP
rs1020245150 7 dbSNP
rs775845942 11 dbSNP
rs1402471980 11 dbSNP
rs760158839 15 dbSNP
rs78861479 16 dbSNP
rs765933705 16 dbSNP
Putative Targets

Gene Information
Gene Symbol PCTP   
Synonyms PC-TP, STARD2
Description phosphatidylcholine transfer protein
Transcript NM_001102402   
Other Transcripts NM_021213   
Expression
Putative miRNA Targets on PCTP
3'UTR of PCTP
(miRNA target sites are highlighted)
>PCTP|NM_001102402|3'UTR
   1 GAAAGAGAACTGGGAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCT
  81 GGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGTTTCTGTCTTCAGAGGCC
 161 TACACACTACCACATCCTTTCTAAGCATGTTTGCCTGACATCCAGCTCACTCGTCTGCTTCCTTTCTCGCTCCCCCCATC
 241 CTGGGCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGCTTGCTTACTATTAGGAGGGGAA
 321 GTCTTCAGTAGGGAACACGATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGACACAACAAAATTTAAGA
 401 ATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCG
 481 TTCAGAGCTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGG
 561 CTGGGATTTGAGGTGATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTATGATGCCAGACC
 641 ATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGAGGAAATGGAT
 721 GATTTCTCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACTGGAAACTGAGGCGT
 801 CAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCATAGCCTTGTGAAAAAGTATCTTTCTATGCAATAAGA
 881 TGAATTTTCCTCCCAGAATATTTAGAAATGTAGAAGGGATAACAGTTCACAGCCAGGTAAAATTTAACTGGTGGCTTAAT
 961 GACTCTGCACCTTTTTCTCAGGAATTCTGCCTAAGTTGTCTGCCTTTTCTACCACCAAAAAGACTTTTAGTTTTCTATGC
1041 TTTCTCCTGAATTTTGGTAGGGTAAGGTATTTCTATGTCAAAGGCACAGCCTTGATGATCTCAGGGAAAAATTTTAATCA
1121 CTGTGTATAATGATACTGAACCTTGATTAATAACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGG
1201 ATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGAAAAGTGTGTTCTATAATGAATAAATATAGAGTGGTTTTTACTTGTC
1281 CTGTGTAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugggagaCUUUCCUUCGu 5'
                 ||::|||||: 
Target 5' ctattagGAGGGGAAGTc 3'
306 - 323 119.00 -12.60
2
miRNA  3' ugGGAGACUUUCCUUCgu 5'
            ::|||   :|||||  
Target 5' tcTTTCT---GGGAAGaa 3'
1221 - 1235 109.00 -12.50
3
miRNA  3' ugGGAGACUUUCCUUCGu 5'
            :||||    |||||: 
Target 5' tgTCTCT----GGAAGTg 3'
36 - 49 105.00 -12.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30113162 8 COSMIC
COSN21080838 23 COSMIC
COSN30484550 26 COSMIC
COSN20078906 60 COSMIC
COSN31511114 79 COSMIC
COSN30127286 126 COSMIC
COSN18837868 343 COSMIC
COSN32055747 741 COSMIC
COSN14583834 768 COSMIC
COSN32056169 823 COSMIC
COSN31547327 1023 COSMIC
COSN31487785 1133 COSMIC
COSN28813298 1267 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1192135567 3 dbSNP
rs1446653116 4 dbSNP
rs180894805 9 dbSNP
rs776312472 11 dbSNP
rs761400564 13 dbSNP
rs1423367723 20 dbSNP
rs764750613 21 dbSNP
rs1172728084 22 dbSNP
rs1360963554 23 dbSNP
rs185946193 26 dbSNP
rs758264699 28 dbSNP
rs766298248 29 dbSNP
rs1436655905 32 dbSNP
rs751553532 35 dbSNP
rs754492085 35 dbSNP
rs1178015626 36 dbSNP
rs1023084148 41 dbSNP
rs1276228788 47 dbSNP
rs754781005 51 dbSNP
rs780890795 52 dbSNP
rs1310365611 53 dbSNP
rs1244458324 56 dbSNP
rs1298088820 59 dbSNP
rs975500871 61 dbSNP
rs1242288069 66 dbSNP
rs568172020 66 dbSNP
rs1319145096 80 dbSNP
rs1284312662 101 dbSNP
rs970200539 104 dbSNP
rs1360716674 114 dbSNP
rs554754075 118 dbSNP
rs984743959 121 dbSNP
rs1242869030 123 dbSNP
rs1378507046 133 dbSNP
rs1289711229 137 dbSNP
rs913154615 139 dbSNP
rs945916986 158 dbSNP
rs981290660 164 dbSNP
rs772460708 166 dbSNP
rs1425227181 168 dbSNP
rs750136093 169 dbSNP
rs928476300 170 dbSNP
rs1161155496 175 dbSNP
rs1422776417 180 dbSNP
rs1187963199 183 dbSNP
rs1261773081 183 dbSNP
rs1285250344 185 dbSNP
rs1484679436 186 dbSNP
rs555601609 189 dbSNP
rs76126995 211 dbSNP
rs1487246249 213 dbSNP
rs780693107 214 dbSNP
rs572776258 216 dbSNP
rs937150622 227 dbSNP
rs1261738876 229 dbSNP
rs971737511 230 dbSNP
rs1321267478 232 dbSNP
rs1422937031 233 dbSNP
rs1184953956 234 dbSNP
rs1055588041 236 dbSNP
rs918954949 237 dbSNP
rs533587297 238 dbSNP
rs887380260 239 dbSNP
rs1051551038 251 dbSNP
rs747635553 254 dbSNP
rs1422411561 255 dbSNP
rs888913243 257 dbSNP
rs535396131 262 dbSNP
rs943225682 265 dbSNP
rs1402739323 269 dbSNP
rs769398310 270 dbSNP
rs900042571 272 dbSNP
rs1421983734 275 dbSNP
rs1251972456 292 dbSNP
rs1043337965 298 dbSNP
rs556731066 300 dbSNP
rs1032428514 307 dbSNP
rs1277856718 309 dbSNP
rs1224319663 315 dbSNP
rs558540706 319 dbSNP
rs1401581571 320 dbSNP
rs1298900987 322 dbSNP
rs1386150942 323 dbSNP
rs999204513 330 dbSNP
rs1031622707 335 dbSNP
rs577440833 339 dbSNP
rs1460073653 350 dbSNP
rs1394553532 357 dbSNP
rs1336378265 358 dbSNP
rs1383739163 361 dbSNP
rs1481205963 363 dbSNP
rs1246483304 364 dbSNP
rs1197121910 370 dbSNP
rs1308175070 374 dbSNP
rs117573973 377 dbSNP
rs1020942954 378 dbSNP
rs1241080236 385 dbSNP
rs1023011992 388 dbSNP
rs1257495734 390 dbSNP
rs1260874331 394 dbSNP
rs1325853252 402 dbSNP
rs981386043 408 dbSNP
rs1198418950 412 dbSNP
rs562701483 415 dbSNP
rs762715351 416 dbSNP
rs770774590 419 dbSNP
rs1470755890 421 dbSNP
rs1403394709 425 dbSNP
rs1171211218 435 dbSNP
rs189666902 444 dbSNP
rs919701398 445 dbSNP
rs147250048 450 dbSNP
rs1438364306 452 dbSNP
rs1160434646 456 dbSNP
rs973429053 457 dbSNP
rs1377190848 458 dbSNP
rs1464629162 465 dbSNP
rs918923914 469 dbSNP
rs954364269 473 dbSNP
rs987185503 480 dbSNP
rs774154879 481 dbSNP
rs1262258512 503 dbSNP
rs943701324 512 dbSNP
rs1352812685 518 dbSNP
rs1446248903 519 dbSNP
rs796068019 524 dbSNP
rs1338166395 525 dbSNP
rs1333142878 526 dbSNP
rs1382431472 527 dbSNP
rs1386200704 529 dbSNP
rs1374374996 531 dbSNP
rs943175258 533 dbSNP
rs1418409081 540 dbSNP
rs1393107244 544 dbSNP
rs181213847 558 dbSNP
rs767371362 563 dbSNP
rs1366797696 569 dbSNP
rs934590012 583 dbSNP
rs1052966801 584 dbSNP
rs1187181034 585 dbSNP
rs185994947 593 dbSNP
rs1032893629 596 dbSNP
rs552252949 598 dbSNP
rs1044433663 599 dbSNP
rs564510346 605 dbSNP
rs1248037678 612 dbSNP
rs1353727474 626 dbSNP
rs1283070385 630 dbSNP
rs777757590 632 dbSNP
rs905928055 639 dbSNP
rs1327757853 642 dbSNP
rs1006077869 646 dbSNP
rs1267307147 664 dbSNP
rs1017094645 668 dbSNP
rs1035616260 669 dbSNP
rs1178698009 675 dbSNP
rs2303506 681 dbSNP
rs994391538 682 dbSNP
rs1029928998 691 dbSNP
rs10445322 698 dbSNP
rs1465360751 707 dbSNP
rs760875258 708 dbSNP
rs1162670589 712 dbSNP
rs919779720 720 dbSNP
rs954333212 720 dbSNP
rs1352595604 729 dbSNP
rs987154388 734 dbSNP
rs1463349093 736 dbSNP
rs557361200 738 dbSNP
rs1477395361 739 dbSNP
rs952565497 740 dbSNP
rs764385191 743 dbSNP
rs982531876 750 dbSNP
rs908294713 752 dbSNP
rs1195826069 755 dbSNP
rs779453808 758 dbSNP
rs1275958309 759 dbSNP
rs964482126 762 dbSNP
rs1217632588 766 dbSNP
rs1384944796 770 dbSNP
rs943707710 779 dbSNP
rs754167190 784 dbSNP
rs1439225960 786 dbSNP
rs190453563 791 dbSNP
rs1040652667 792 dbSNP
rs539781889 799 dbSNP
rs921530561 800 dbSNP
rs925767090 814 dbSNP
rs1168882886 820 dbSNP
rs1465285596 821 dbSNP
rs1429748828 829 dbSNP
rs934495380 831 dbSNP
rs9894355 840 dbSNP
rs1477016261 849 dbSNP
rs1246003718 853 dbSNP
rs183437034 860 dbSNP
rs1054021839 865 dbSNP
rs1205667694 871 dbSNP
rs536478557 872 dbSNP
rs1197644651 879 dbSNP
rs1323719612 887 dbSNP
rs917189605 905 dbSNP
rs1265171055 907 dbSNP
rs1487826204 913 dbSNP
rs1221247583 916 dbSNP
rs1365904407 918 dbSNP
rs893993982 920 dbSNP
rs779270040 924 dbSNP
rs1379283729 932 dbSNP
rs11556499 933 dbSNP
rs1044347589 934 dbSNP
rs1269741547 937 dbSNP
rs905867270 940 dbSNP
rs1477524277 953 dbSNP
rs1191534843 954 dbSNP
rs1421951315 963 dbSNP
rs548252826 967 dbSNP
rs1177990033 969 dbSNP
rs13477 971 dbSNP
rs750764787 992 dbSNP
rs140981103 1003 dbSNP
rs1424203300 1008 dbSNP
rs906582106 1019 dbSNP
rs1441408189 1023 dbSNP
rs1003558596 1024 dbSNP
rs1177425699 1024 dbSNP
rs1461509108 1025 dbSNP
rs1038900055 1028 dbSNP
rs1207551330 1033 dbSNP
rs1170892224 1036 dbSNP
rs780457644 1041 dbSNP
rs1033657263 1054 dbSNP
rs1278344424 1066 dbSNP
rs1224839764 1075 dbSNP
rs897313610 1076 dbSNP
rs994366090 1077 dbSNP
rs1422716982 1092 dbSNP
rs1383583571 1094 dbSNP
rs931385704 1102 dbSNP
rs1366066016 1118 dbSNP
rs1446078312 1126 dbSNP
rs1358380772 1131 dbSNP
rs1398886325 1134 dbSNP
rs747628611 1137 dbSNP
rs769343182 1143 dbSNP
rs1378352901 1149 dbSNP
rs1157953719 1155 dbSNP
rs1363656157 1163 dbSNP
rs142459599 1167 dbSNP
rs1179814608 1169 dbSNP
rs952694888 1178 dbSNP
rs1237269154 1182 dbSNP
rs1217748383 1185 dbSNP
rs1007160308 1187 dbSNP
rs1312543049 1187 dbSNP
rs1240014340 1190 dbSNP
rs1322468651 1197 dbSNP
rs1314874082 1202 dbSNP
rs186256815 1212 dbSNP
rs908305613 1212 dbSNP
rs1270575464 1234 dbSNP
rs1225429312 1236 dbSNP
rs1293167074 1239 dbSNP
rs1358358627 1243 dbSNP
rs576438545 1246 dbSNP
rs1214544058 1251 dbSNP
rs1243857455 1259 dbSNP
rs115562564 1261 dbSNP
rs1033207091 1263 dbSNP
rs1181468382 1264 dbSNP
rs192160159 1266 dbSNP
rs1422912445 1269 dbSNP
rs1419725532 1270 dbSNP
rs770578511 1275 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B HITS-CLIP data was present in Chi_ControlA_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugggagacuUUCCUUCGu 5'
                   |||||||| 
Target 5' --------uAAGGAAGCc 3'
1 - 10
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000576183.1 | 3UTR | UAAGGAAGCCAUGCAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset Chi_ControlA_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control A
Location of target site ENST00000576183.1 | 3UTR | UAAGGAAGCCAUGCAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE27834 Pluripotent stem cells 0.439 4.4e-2 0.312 1.2e-1 16 Click to see details
GSE32688 Pancreatic cancer -0.302 4.6e-2 -0.367 1.9e-2 32 Click to see details
GSE21849 B cell lymphoma -0.233 1.1e-1 -0.166 1.9e-1 29 Click to see details
GSE17306 Multiple myeloma 0.068 3.2e-1 0.331 1.0e-2 49 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.028 4.5e-1 -0.145 2.4e-1 25 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
85 hsa-miR-516b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT077049 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT155261 IFNAR2 interferon alpha and beta receptor subunit 2 2 4
MIRT446119 ASTN1 astrotactin 1 2 2
MIRT447355 STOM stomatin 2 2
MIRT469329 RGP1 RGP1 homolog, RAB6A GEF complex partner 1 2 2
MIRT470201 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT475944 GXYLT1 glucoside xylosyltransferase 1 2 4
MIRT498268 KIAA1644 KIAA1644 2 2
MIRT501725 OVOL1 ovo like transcriptional repressor 1 2 2
MIRT522860 KIAA1551 KIAA1551 2 2
MIRT527900 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT528557 DNAAF3 dynein axonemal assembly factor 3 2 2
MIRT531250 PDF peptide deformylase, mitochondrial 2 2
MIRT534410 SENP1 SUMO1/sentrin specific peptidase 1 2 2
MIRT544656 MED19 mediator complex subunit 19 2 2
MIRT550681 YARS tyrosyl-tRNA synthetase 2 2
MIRT557208 HNRNPF heterogeneous nuclear ribonucleoprotein F 2 4
MIRT611532 DDB1 damage specific DNA binding protein 1 2 2
MIRT612087 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT616535 PARD6B par-6 family cell polarity regulator beta 2 4
MIRT616738 DCTN5 dynactin subunit 5 2 2
MIRT616754 SVOP SV2 related protein 2 4
MIRT617380 FAM227A family with sequence similarity 227 member A 2 2
MIRT617624 RAB3IP RAB3A interacting protein 2 2
MIRT620778 MT1A metallothionein 1A 2 2
MIRT623172 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT626034 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT627376 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT630533 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT631686 NQO2 N-ribosyldihydronicotinamide:quinone reductase 2 2 2
MIRT633896 FGF10 fibroblast growth factor 10 2 2
MIRT635933 PLA2G12A phospholipase A2 group XIIA 2 2
MIRT636275 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT636285 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT636502 GDAP1L1 ganglioside induced differentiation associated protein 1 like 1 2 2
MIRT638037 SHPK sedoheptulokinase 2 2
MIRT639162 LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 2 2
MIRT639571 GORASP1 golgi reassembly stacking protein 1 2 2
MIRT641248 CENPN centromere protein N 2 2
MIRT643650 MYOCD myocardin 2 2
MIRT645490 TRIM63 tripartite motif containing 63 2 2
MIRT648016 SLCO4C1 solute carrier organic anion transporter family member 4C1 2 2
MIRT648102 LRRFIP1 LRR binding FLII interacting protein 1 2 2
MIRT648729 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT650177 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT652787 TCEANC2 transcription elongation factor A N-terminal and central domain containing 2 2 2
MIRT653248 SORD sorbitol dehydrogenase 2 2
MIRT654859 PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F 2 2
MIRT655533 PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 2 2
MIRT656390 MCU mitochondrial calcium uniporter 2 2
MIRT656881 KIF1C kinesin family member 1C 2 2
MIRT657083 JMY junction mediating and regulatory protein, p53 cofactor 2 2
MIRT657629 GPX8 glutathione peroxidase 8 (putative) 2 2
MIRT658295 FAM83F family with sequence similarity 83 member F 2 2
MIRT659432 COL1A1 collagen type I alpha 1 chain 2 2
MIRT659791 CBLB Cbl proto-oncogene B 2 2
MIRT660153 BRCC3 BRCA1/BRCA2-containing complex subunit 3 2 2
MIRT660490 ARRDC3 arrestin domain containing 3 2 2
MIRT660503 ARPC2 actin related protein 2/3 complex subunit 2 2 2
MIRT666356 SIKE1 suppressor of IKBKE 1 2 2
MIRT677774 FKTN fukutin 2 2
MIRT688556 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT697415 ZFP91 ZFP91 zinc finger protein 2 2
MIRT709468 KRTAP19-1 keratin associated protein 19-1 2 2
MIRT711154 WDR82P1 WD repeat domain 82 pseudogene 1 2 2
MIRT711467 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT712515 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 2
MIRT712661 PCTP phosphatidylcholine transfer protein 2 2
MIRT713304 TYRP1 tyrosinase related protein 1 2 2
MIRT714597 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT716603 MPPED1 metallophosphoesterase domain containing 1 2 2
MIRT717537 PYGO2 pygopus family PHD finger 2 2 2
MIRT718058 CYP3A5 cytochrome P450 family 3 subfamily A member 5 2 2
MIRT718539 PIGQ phosphatidylinositol glycan anchor biosynthesis class Q 2 2
MIRT719768 ZNF236 zinc finger protein 236 2 2
MIRT720162 PNPO pyridoxamine 5'-phosphate oxidase 2 2
MIRT720360 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT721182 HOPX HOP homeobox 2 2
MIRT721278 RAD54L2 RAD54 like 2 2 2
MIRT721357 ENTHD1 ENTH domain containing 1 2 2
MIRT721504 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT721918 LINGO2 leucine rich repeat and Ig domain containing 2 2 2
MIRT722278 LURAP1 leucine rich adaptor protein 1 2 2
MIRT722789 FUT4 fucosyltransferase 4 2 2
MIRT724390 ABAT 4-aminobutyrate aminotransferase 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-516b Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-516b Bromocriptine approved 31101 Microarray Prolactinoma 22366961 2012 up-regulated
miR-516b Bromocriptine approved 31101 Quantitative real-time PCR Prolactinoma 22366961 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-516b-3p Paclitaxel 36314 NSC125973 approved sensitive High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-miR-516b-3p Ribavirin+Pegylated IFNa-2b sensitive tissue (chronic hepatitis C)
hsa-miR-516b-3p Testosterone+Exemestane sensitive cell line (MCF-7)
hsa-miR-516b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-516b-3p Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)

Error report submission