pre-miRNA Information
pre-miRNA hsa-mir-6509   
Genomic Coordinates chr7: 135206994 - 135207078
Description Homo sapiens miR-6509 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6509-3p
Sequence 52| UUCCACUGCCACUACCUAAUUU |73
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs778601614 1 dbSNP
rs754554776 3 dbSNP
rs767798995 3 dbSNP
rs145322812 4 dbSNP
rs773941257 5 dbSNP
rs768273593 9 dbSNP
rs984565062 12 dbSNP
rs748872915 13 dbSNP
rs774861125 14 dbSNP
rs13241975 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LAIR1   
Synonyms CD305, LAIR-1
Description leukocyte associated immunoglobulin like receptor 1
Transcript NM_002287   
Other Transcripts NM_021706   
Expression
Putative miRNA Targets on LAIR1
3'UTR of LAIR1
(miRNA target sites are highlighted)
>LAIR1|NM_002287|3'UTR
   1 CCCCATACCCACCTGGCCTCTGCACCTGAGGGTAGAAAGTCACTCTAGGAAAAGCCTGAAGCAGCCATTTGGAAGGCTTC
  81 CTGTTGGATTCCTCTTCATCTAGAAAGCCAGCCAGGCAGCTGTCCTGGAGACAAGAGCTGGAGACTGGAGGTTTCTAACC
 161 AGCATCCAGAAGGTTCGTTAGCCAGGTGGTCCCTTCTACAATCGAGCAGCTCCTTGGACAGACTGTTTCTCAGTTATTTC
 241 CAGAGACCCAGCTACAGTTCCCTGGCTGTTTCTAGAGACCCAGCTTTATTCACCTGACTGTTTCCAGAGACCCAGCTAAA
 321 GTCACCTGCCTGTTCTAAAGGCCCAGCTACAGCCAATCAGCCGATTTCCTGAGCAGTGATGCCACCTCCAAGCTTGTCCT
 401 AGGTGTCTGCTGTGAACCTCCAGTGACCCCAGAGACTTTGCTGTAATTATCTGCCCTGCTGACCCTAAAGACCTTCCTAG
 481 AAGTCAAGAGCTAGCCTTGAGACTGTGCTATACACACACAGCTGAGAGCCAAGCCCAGTTCTCTGGGTTGTGCTTTACTC
 561 CACGCATCAATAAATAATTTTGAAGGCCTCACATCTGGCAGCCCCAGGCCTGGTCCTGGGTGCATAGGTCTCTCGGACCC
 641 ACTCTCTGCCTTCACAGTTGTTCAAAGCTGAGTGAGGGAAACAGGACTTACGAAAACGTGTCAGCGTTTTCTTTTTAAAA
 721 TTTAATTGATCAGGATTGTACGTATTCAAGGTGTAAAATGTGATAATTTGTCGTACACGTACATTGTGCAATGACAGTCA
 801 CAATCAATTCCTCAGCGCACCCATCGCCACAGATACGATACATTAGATATTCTGAACTTGCTCATCTTAGGACTTCACAT
 881 TGGTGTCAGTGTTTTCTGACAAATCACGTGTATCAGGAATGAATGAGGGAGGTGTGGCTGGGTGAAGGCAGAGAGCCGAC
 961 CCTACAGGTCCACATCTGCACATACATGCACAGGAATGCATGCTCTCACACACATGCATACACACACGCACACACACAGA
1041 CATGCACATACACTCACACGCCCCAGGAAATCCAAGGAATCACTGAGCCTGCTGTTGGTTGAGGCATTTCTGAGTATCCA
1121 CCCTACCTGTAGGGTCAGATGTACTGATTGACACAGAAAATTACCCTATGTACCACTAGGAGGCGGCAGAATCTCATTTG
1201 GGTTAATCTGTGTTTGTCTTTAAAAAACAAAAACAGGCCGGGCATGGAGGCTCACGCCTGTAATCCCAGCACTTTGGGAG
1281 GCTGAGGTGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATA
1361 CAAAAAAATTAGCCGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGGAGGAGAATGGCGTGAAC
1441 CCGGGAGGCGGAGTTTGCAGTGAGCCGAGGTGGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCAAAAA
1521 AGAAAAGAAAAGAAAAGAAAGATTTTTAAGAATTCAGCAAAAACTCAGCCAGCTCTTTCTATGGGGCAGTTGCTAATTTA
1601 GTTCTAGGCAAACGTGGACACATTAAATTCTCCTACAAACCCTC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uuUAAU----CCAUCACCGUCACCUu 5'
            ||||    ||| ||||::||||: 
Target 5' aaATTAGCCGGGT-GTGGTGGTGGGt 3'
1366 - 1390 125.00 -19.70
2
miRNA  3' uuuAAUCC---------AUCACCGUCACcuu 5'
             |||||         |:||| |||||   
Target 5' atcTTAGGACTTCACATTGGTGTCAGTGttt 3'
864 - 894 119.00 -11.92
3
miRNA  3' uuuAAUCCAUCACCGU---CACCUu 5'
             |||| |   ||||   ||||| 
Target 5' aatTTAGTTCTAGGCAAACGTGGAc 3'
1595 - 1619 115.00 -9.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN5853150 18 COSMIC
COSN30152444 28 COSMIC
COSN19704652 37 COSMIC
COSN30529365 40 COSMIC
COSN20085901 48 COSMIC
COSN26982122 61 COSMIC
COSN30520649 71 COSMIC
COSN30453875 80 COSMIC
COSN30486184 86 COSMIC
COSN30183931 96 COSMIC
COSN30505412 114 COSMIC
COSN24315296 140 COSMIC
COSN17076245 173 COSMIC
COSN31506910 177 COSMIC
COSN15660825 461 COSMIC
COSN17037726 483 COSMIC
COSN8754273 489 COSMIC
COSN21724583 605 COSMIC
COSN7449688 751 COSMIC
COSN8976026 773 COSMIC
COSN25006815 779 COSMIC
COSN26546340 1005 COSMIC
COSN6552950 1027 COSMIC
COSN25698507 1059 COSMIC
COSN15381177 1442 COSMIC
COSN14492680 1650 COSMIC
COSN24169580 1794 COSMIC
COSN1771880 1819 COSMIC
COSN22156131 1870 COSMIC
COSN27807460 1971 COSMIC
COSN8262193 2000 COSMIC
COSN15576048 2037 COSMIC
COSN24152441 2201 COSMIC
COSN7449687 2213 COSMIC
COSN23785622 2250 COSMIC
COSN22038591 2453 COSMIC
COSN16128392 2637 COSMIC
COSN17042770 2669 COSMIC
COSN9226902 2705 COSMIC
COSN15054287 2861 COSMIC
COSN16132320 2915 COSMIC
COSN32229068 3024 COSMIC
COSN17665996 3156 COSMIC
COSN29926795 3601 COSMIC
COSN22990835 3780 COSMIC
COSN16132468 3828 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs146566429 1 dbSNP
rs192330346 3 dbSNP
rs755352799 5 dbSNP
rs754763759 8 dbSNP
rs55799769 9 dbSNP
rs1262835365 10 dbSNP
rs766052042 11 dbSNP
rs1347698249 16 dbSNP
rs760303811 18 dbSNP
rs772755587 20 dbSNP
rs374608831 23 dbSNP
rs1412981944 25 dbSNP
rs761342733 27 dbSNP
rs1436758637 29 dbSNP
rs1403449713 34 dbSNP
rs775923414 36 dbSNP
rs1393303157 39 dbSNP
rs770294341 40 dbSNP
rs746161447 41 dbSNP
rs542269242 47 dbSNP
rs186759639 49 dbSNP
rs1448849558 51 dbSNP
rs1343157963 68 dbSNP
rs1429102660 70 dbSNP
rs983667885 71 dbSNP
rs1315998599 80 dbSNP
rs929548414 86 dbSNP
rs901043908 96 dbSNP
rs1169992741 101 dbSNP
rs1356784027 116 dbSNP
rs1015398241 125 dbSNP
rs1376748604 133 dbSNP
rs1004142441 135 dbSNP
rs1483957839 138 dbSNP
rs888334531 141 dbSNP
rs545341120 143 dbSNP
rs920888066 144 dbSNP
rs552011678 158 dbSNP
rs948414195 159 dbSNP
rs1252571121 165 dbSNP
rs973974328 166 dbSNP
rs964937847 173 dbSNP
rs532201686 176 dbSNP
rs559968360 177 dbSNP
rs1163270026 195 dbSNP
rs546662558 201 dbSNP
rs938393917 203 dbSNP
rs928143203 204 dbSNP
rs1371954067 207 dbSNP
rs1042502766 213 dbSNP
rs987256924 215 dbSNP
rs1314418610 216 dbSNP
rs1340643154 219 dbSNP
rs1244983324 221 dbSNP
rs954350465 226 dbSNP
rs945647718 242 dbSNP
rs1031307101 243 dbSNP
rs529702973 247 dbSNP
rs1255639080 256 dbSNP
rs1480348724 277 dbSNP
rs1231408211 278 dbSNP
rs144745396 282 dbSNP
rs954219206 300 dbSNP
rs575118813 304 dbSNP
rs1301766479 312 dbSNP
rs1013146124 313 dbSNP
rs1408969144 319 dbSNP
rs1432224146 324 dbSNP
rs921271319 325 dbSNP
rs976836564 326 dbSNP
rs1348581165 327 dbSNP
rs1460038050 330 dbSNP
rs542493509 332 dbSNP
rs1379483832 336 dbSNP
rs965421087 340 dbSNP
rs1312714415 345 dbSNP
rs894325428 347 dbSNP
rs1229142296 354 dbSNP
rs772576054 358 dbSNP
rs576731262 362 dbSNP
rs758690234 363 dbSNP
rs183557746 376 dbSNP
rs1047759796 377 dbSNP
rs1241727166 379 dbSNP
rs546064345 380 dbSNP
rs1187414313 385 dbSNP
rs1027347208 391 dbSNP
rs1419430055 394 dbSNP
rs929327165 399 dbSNP
rs1177669511 401 dbSNP
rs1177635044 421 dbSNP
rs1359217227 422 dbSNP
rs149341429 425 dbSNP
rs1469007792 441 dbSNP
rs1801988 458 dbSNP
rs1390639253 459 dbSNP
rs1435556315 460 dbSNP
rs750449551 470 dbSNP
rs1472443925 474 dbSNP
rs920833788 475 dbSNP
rs1220824967 478 dbSNP
rs973706704 480 dbSNP
rs1324332157 483 dbSNP
rs1223200782 484 dbSNP
rs894173718 491 dbSNP
rs1056690298 495 dbSNP
rs879544208 504 dbSNP
rs1216997003 514 dbSNP
rs1241845408 519 dbSNP
rs116432815 521 dbSNP
rs192456678 523 dbSNP
rs56189436 526 dbSNP
rs1041427505 529 dbSNP
rs1479819296 534 dbSNP
rs1198770858 538 dbSNP
rs945564687 542 dbSNP
rs1413715393 544 dbSNP
rs915404219 553 dbSNP
rs1343189851 561 dbSNP
rs187635755 563 dbSNP
rs1227592774 564 dbSNP
rs932878881 569 dbSNP
rs1294038193 570 dbSNP
rs1346295184 571 dbSNP
rs1404417128 574 dbSNP
rs1281410421 580 dbSNP
rs1331515189 586 dbSNP
rs921275304 602 dbSNP
rs977043253 608 dbSNP
rs1284061031 611 dbSNP
rs138831555 613 dbSNP
rs1021937609 617 dbSNP
rs1270257241 618 dbSNP
rs368539733 619 dbSNP
rs965471709 625 dbSNP
rs908651854 626 dbSNP
rs1410420180 628 dbSNP
rs1339803481 634 dbSNP
rs1012847186 635 dbSNP
rs1157597662 651 dbSNP
rs868316110 654 dbSNP
rs958748024 662 dbSNP
rs1432262846 672 dbSNP
rs1397251638 674 dbSNP
rs982854345 682 dbSNP
rs554447959 684 dbSNP
rs1054033 688 dbSNP
rs56197047 691 dbSNP
rs1410284611 692 dbSNP
rs759390896 697 dbSNP
rs906609947 699 dbSNP
rs774352697 700 dbSNP
rs1279178901 706 dbSNP
rs1368378334 711 dbSNP
rs1371390733 711 dbSNP
rs1035334943 716 dbSNP
rs1292906901 736 dbSNP
rs1359374896 737 dbSNP
rs1047874351 738 dbSNP
rs1002514808 741 dbSNP
rs145160731 742 dbSNP
rs1230833136 752 dbSNP
rs1473552307 755 dbSNP
rs899183900 764 dbSNP
rs1384358414 768 dbSNP
rs183515192 773 dbSNP
rs796346753 778 dbSNP
rs191727979 779 dbSNP
rs3786641 782 dbSNP
rs1328192164 783 dbSNP
rs932910989 783 dbSNP
rs900062605 791 dbSNP
rs1246353015 793 dbSNP
rs1340483613 794 dbSNP
rs1316226560 799 dbSNP
rs1319285257 800 dbSNP
rs1382455303 802 dbSNP
rs1432532481 804 dbSNP
rs924346051 812 dbSNP
rs977159486 813 dbSNP
rs762712125 816 dbSNP
rs377246095 817 dbSNP
rs1443836974 823 dbSNP
rs1203876589 825 dbSNP
rs3826753 826 dbSNP
rs1442533159 829 dbSNP
rs1323023826 830 dbSNP
rs199714928 831 dbSNP
rs3826754 832 dbSNP
rs1036052520 836 dbSNP
rs1041300871 852 dbSNP
rs1161907405 860 dbSNP
rs117299550 863 dbSNP
rs1337627932 869 dbSNP
rs951219533 871 dbSNP
rs563018433 891 dbSNP
rs1188004265 899 dbSNP
rs1320616183 906 dbSNP
rs983312841 907 dbSNP
rs1227314775 908 dbSNP
rs1267941277 914 dbSNP
rs746767861 932 dbSNP
rs1026381310 933 dbSNP
rs1216249040 940 dbSNP
rs6509867 942 dbSNP
rs919766514 951 dbSNP
rs1459652500 953 dbSNP
rs899127729 957 dbSNP
rs141469313 958 dbSNP
rs1371472363 968 dbSNP
rs1360029639 970 dbSNP
rs1296323648 972 dbSNP
rs1428866718 983 dbSNP
rs1225528600 984 dbSNP
rs560647000 986 dbSNP
rs1160702877 987 dbSNP
rs958765005 1002 dbSNP
rs540285631 1003 dbSNP
rs1035597513 1005 dbSNP
rs138483912 1007 dbSNP
rs889361759 1014 dbSNP
rs1316827096 1018 dbSNP
rs1347873207 1027 dbSNP
rs981316242 1028 dbSNP
rs183118189 1030 dbSNP
rs1321003269 1033 dbSNP
rs1240723006 1037 dbSNP
rs1261137090 1039 dbSNP
rs1431969439 1039 dbSNP
rs1349681981 1043 dbSNP
rs1330835276 1045 dbSNP
rs1321961591 1057 dbSNP
rs967055966 1059 dbSNP
rs777442029 1060 dbSNP
rs1019867731 1061 dbSNP
rs150443179 1064 dbSNP
rs892859521 1073 dbSNP
rs376956020 1075 dbSNP
rs1479601690 1088 dbSNP
rs1041412514 1093 dbSNP
rs1364794314 1099 dbSNP
rs758288794 1101 dbSNP
rs1032942769 1102 dbSNP
rs140561016 1106 dbSNP
rs1157121703 1110 dbSNP
rs1425786717 1119 dbSNP
rs899988973 1145 dbSNP
rs1244806540 1148 dbSNP
rs1343064669 1150 dbSNP
rs75814418 1152 dbSNP
rs538834942 1153 dbSNP
rs1490510426 1156 dbSNP
rs991164165 1159 dbSNP
rs944271698 1160 dbSNP
rs1293622854 1167 dbSNP
rs887110888 1169 dbSNP
rs1047026830 1173 dbSNP
rs958645882 1184 dbSNP
rs1489875978 1185 dbSNP
rs1343628741 1197 dbSNP
rs879883246 1199 dbSNP
rs981377508 1200 dbSNP
rs931405779 1202 dbSNP
rs190931340 1206 dbSNP
rs991967302 1210 dbSNP
rs1365010923 1213 dbSNP
rs972519088 1234 dbSNP
rs553124309 1235 dbSNP
rs1273507989 1239 dbSNP
rs1363237445 1240 dbSNP
rs1463083470 1243 dbSNP
rs139739133 1244 dbSNP
rs149490058 1245 dbSNP
rs386810895 1246 dbSNP
rs1307886657 1247 dbSNP
rs111919294 1248 dbSNP
rs185055604 1253 dbSNP
rs1030510841 1255 dbSNP
rs1414188998 1256 dbSNP
rs1309115052 1265 dbSNP
rs889550520 1270 dbSNP
rs937209216 1274 dbSNP
rs928467766 1277 dbSNP
rs981325935 1278 dbSNP
rs1174121042 1279 dbSNP
rs1480455638 1281 dbSNP
rs997728648 1283 dbSNP
rs903318841 1286 dbSNP
rs967232981 1288 dbSNP
rs1020385322 1289 dbSNP
rs1480602943 1290 dbSNP
rs1041863904 1291 dbSNP
rs947575621 1292 dbSNP
rs989809462 1293 dbSNP
rs1371976566 1300 dbSNP
rs957242974 1302 dbSNP
rs569574592 1304 dbSNP
rs552555783 1305 dbSNP
rs1334400120 1310 dbSNP
rs1483981846 1313 dbSNP
rs900042989 1314 dbSNP
rs981322099 1315 dbSNP
rs1265250296 1318 dbSNP
rs929881855 1320 dbSNP
rs1203468867 1321 dbSNP
rs918547780 1324 dbSNP
rs1208809467 1326 dbSNP
rs973927422 1330 dbSNP
rs1310131759 1332 dbSNP
rs532744568 1333 dbSNP
rs1016326434 1334 dbSNP
rs1468917631 1335 dbSNP
rs1174054053 1340 dbSNP
rs373184577 1341 dbSNP
rs986632508 1343 dbSNP
rs1431482590 1345 dbSNP
rs560287345 1345 dbSNP
rs1359711592 1352 dbSNP
rs1398237902 1359 dbSNP
rs1285230028 1369 dbSNP
rs1324567214 1372 dbSNP
rs1223111470 1373 dbSNP
rs7248274 1374 dbSNP
rs1376165360 1375 dbSNP
rs7248583 1378 dbSNP
rs189254187 1379 dbSNP
rs561027852 1380 dbSNP
rs997509797 1381 dbSNP
rs1268948357 1382 dbSNP
rs544631892 1384 dbSNP
rs111398712 1386 dbSNP
rs1020985991 1387 dbSNP
rs1011729502 1389 dbSNP
rs181802298 1390 dbSNP
rs190055694 1391 dbSNP
rs386810894 1392 dbSNP
rs893315266 1403 dbSNP
rs1055523061 1410 dbSNP
rs887332751 1411 dbSNP
rs1047742273 1413 dbSNP
rs7248562 1423 dbSNP
rs898480112 1428 dbSNP
rs1375712444 1429 dbSNP
rs1203964834 1434 dbSNP
rs1306673748 1435 dbSNP
rs1055923409 1442 dbSNP
rs937387422 1443 dbSNP
rs184804560 1449 dbSNP
rs371258190 1450 dbSNP
rs1226931980 1451 dbSNP
rs12608731 1454 dbSNP
rs945986042 1466 dbSNP
rs544921650 1467 dbSNP
rs1176433023 1469 dbSNP
rs918487374 1470 dbSNP
rs913172722 1471 dbSNP
rs1364824585 1472 dbSNP
rs1404844624 1474 dbSNP
rs990459989 1480 dbSNP
rs1356513980 1483 dbSNP
rs974413856 1487 dbSNP
rs1443173075 1488 dbSNP
rs1279376688 1491 dbSNP
rs1375137556 1492 dbSNP
rs535021241 1496 dbSNP
rs567416311 1497 dbSNP
rs1359270810 1503 dbSNP
rs557083599 1504 dbSNP
rs537060116 1505 dbSNP
rs974494982 1509 dbSNP
rs866971345 1511 dbSNP
rs965753969 1512 dbSNP
rs1019809232 1513 dbSNP
rs911051396 1516 dbSNP
rs1462496543 1521 dbSNP
rs12610273 1522 dbSNP
rs1384565582 1522 dbSNP
rs1471740841 1523 dbSNP
rs1421698996 1527 dbSNP
rs923391437 1527 dbSNP
rs953460432 1527 dbSNP
rs976040902 1532 dbSNP
rs967376970 1533 dbSNP
rs552857606 1534 dbSNP
rs1330914025 1536 dbSNP
rs1398312308 1541 dbSNP
rs1454926101 1541 dbSNP
rs1345715819 1543 dbSNP
rs1020512024 1544 dbSNP
rs1446434036 1550 dbSNP
rs192907767 1561 dbSNP
rs1008421522 1564 dbSNP
rs1271471816 1565 dbSNP
rs1421562343 1566 dbSNP
rs1415387309 1567 dbSNP
rs1213688008 1568 dbSNP
rs951616060 1572 dbSNP
rs1025928140 1581 dbSNP
rs996158722 1582 dbSNP
rs1034936755 1594 dbSNP
rs1242276903 1613 dbSNP
rs532662790 1614 dbSNP
rs1195230693 1615 dbSNP
rs1243969825 1620 dbSNP
rs1001744904 1622 dbSNP
rs898498923 1630 dbSNP
rs752563276 1634 dbSNP
rs566811272 1640 dbSNP
rs1471052132 1641 dbSNP
rs1045537598 1650 dbSNP
rs546821146 1651 dbSNP
rs896835405 1658 dbSNP
rs765315185 1670 dbSNP
rs1327461816 1676 dbSNP
rs1398881825 1680 dbSNP
rs1275701852 1681 dbSNP
rs1347059626 1682 dbSNP
rs1320411814 1685 dbSNP
rs1262342575 1695 dbSNP
rs75085835 1696 dbSNP
rs1206610532 1700 dbSNP
rs1246783781 1701 dbSNP
rs941275816 1703 dbSNP
rs1364746879 1711 dbSNP
rs945912779 1715 dbSNP
rs913049898 1716 dbSNP
rs561054359 1723 dbSNP
rs1200409162 1733 dbSNP
rs1377481412 1734 dbSNP
rs1362333958 1742 dbSNP
rs1160615227 1745 dbSNP
rs1386339515 1751 dbSNP
rs1419603388 1752 dbSNP
rs1295853429 1756 dbSNP
rs1054421125 1757 dbSNP
rs544331013 1758 dbSNP
rs921624280 1762 dbSNP
rs1328926094 1781 dbSNP
rs1240957890 1786 dbSNP
rs868259856 1787 dbSNP
rs530955888 1788 dbSNP
rs965682471 1790 dbSNP
rs911672003 1797 dbSNP
rs1284056488 1799 dbSNP
rs1490857827 1801 dbSNP
rs1223244588 1805 dbSNP
rs1431605889 1806 dbSNP
rs923340889 1815 dbSNP
rs983188356 1823 dbSNP
rs1439689560 1829 dbSNP
rs951615461 1830 dbSNP
rs1428468441 1835 dbSNP
rs1157365567 1838 dbSNP
rs1367940052 1842 dbSNP
rs976156725 1843 dbSNP
rs967323032 1845 dbSNP
rs1388164372 1847 dbSNP
rs913232653 1861 dbSNP
rs1329344897 1874 dbSNP
rs1026193951 1894 dbSNP
rs1375872727 1895 dbSNP
rs1190052188 1900 dbSNP
rs758501495 1904 dbSNP
rs963257714 1906 dbSNP
rs1359984612 1915 dbSNP
rs957856785 1921 dbSNP
rs1034330754 1926 dbSNP
rs1262917271 1938 dbSNP
rs1001513622 1939 dbSNP
rs1197771256 1944 dbSNP
rs1251758644 1946 dbSNP
rs1487823988 1955 dbSNP
rs1177086336 1963 dbSNP
rs907201189 1964 dbSNP
rs1445718049 1972 dbSNP
rs565098460 1974 dbSNP
rs112993549 1981 dbSNP
rs1001692388 1992 dbSNP
rs1010274899 1994 dbSNP
rs541278126 1999 dbSNP
rs754003777 2000 dbSNP
rs1054664985 2006 dbSNP
rs1338399485 2007 dbSNP
rs1341493553 2009 dbSNP
rs1024031273 2012 dbSNP
rs1312183119 2015 dbSNP
rs1272775557 2031 dbSNP
rs993923989 2034 dbSNP
rs1229624712 2035 dbSNP
rs1258951340 2036 dbSNP
rs1317474092 2043 dbSNP
rs1197172664 2047 dbSNP
rs1245335971 2049 dbSNP
rs1483889901 2050 dbSNP
rs1181790963 2051 dbSNP
rs1429790467 2064 dbSNP
rs935948185 2065 dbSNP
rs1422514698 2067 dbSNP
rs1229947193 2075 dbSNP
rs1308299445 2080 dbSNP
rs900395971 2087 dbSNP
rs1300407414 2088 dbSNP
rs896776780 2089 dbSNP
rs201177953 2091 dbSNP
rs57681745 2091 dbSNP
rs1038954891 2092 dbSNP
rs1301023330 2092 dbSNP
rs1303647268 2092 dbSNP
rs775858351 2092 dbSNP
rs1426502294 2093 dbSNP
rs770394522 2093 dbSNP
rs1217000146 2094 dbSNP
rs1265466946 2094 dbSNP
rs1198623600 2101 dbSNP
rs79575870 2102 dbSNP
rs1254772650 2103 dbSNP
rs58531272 2103 dbSNP
rs766662141 2103 dbSNP
rs1193813946 2104 dbSNP
rs1491427001 2104 dbSNP
rs889688158 2104 dbSNP
rs1429479082 2105 dbSNP
rs1491527657 2106 dbSNP
rs1173646056 2107 dbSNP
rs1270823705 2107 dbSNP
rs1398452173 2107 dbSNP
rs1454231240 2107 dbSNP
rs1491436031 2107 dbSNP
rs568569052 2107 dbSNP
rs1169109784 2110 dbSNP
rs1219043616 2113 dbSNP
rs1299584145 2114 dbSNP
rs944387151 2119 dbSNP
rs1462236526 2120 dbSNP
rs1487029792 2121 dbSNP
rs559682535 2134 dbSNP
rs576313024 2136 dbSNP
rs1246953566 2140 dbSNP
rs10425360 2142 dbSNP
rs1049655622 2143 dbSNP
rs557097612 2150 dbSNP
rs200599345 2151 dbSNP
rs1483000574 2162 dbSNP
rs1417944423 2163 dbSNP
rs1249802314 2166 dbSNP
rs1304992578 2170 dbSNP
rs1197620814 2171 dbSNP
rs1481091444 2175 dbSNP
rs1350710708 2177 dbSNP
rs922453313 2182 dbSNP
rs577584179 2183 dbSNP
rs929013685 2184 dbSNP
rs1230836992 2187 dbSNP
rs1309171028 2192 dbSNP
rs1325361026 2193 dbSNP
rs1283660293 2197 dbSNP
rs918775817 2198 dbSNP
rs778792089 2201 dbSNP
rs1227750840 2208 dbSNP
rs557505054 2212 dbSNP
rs946138069 2215 dbSNP
rs534592677 2217 dbSNP
rs1348551534 2218 dbSNP
rs913357609 2221 dbSNP
rs962893448 2223 dbSNP
rs990551258 2224 dbSNP
rs936046550 2234 dbSNP
rs1177707890 2236 dbSNP
rs757372330 2242 dbSNP
rs927520270 2246 dbSNP
rs980362282 2247 dbSNP
rs971520516 2248 dbSNP
rs1024479226 2249 dbSNP
rs555762806 2250 dbSNP
rs537421450 2251 dbSNP
rs1402644234 2263 dbSNP
rs1448018603 2267 dbSNP
rs972933067 2270 dbSNP
rs1401058320 2275 dbSNP
rs1300669092 2279 dbSNP
rs1024222132 2280 dbSNP
rs1431959279 2282 dbSNP
rs1010331736 2284 dbSNP
rs534722197 2286 dbSNP
rs576510981 2291 dbSNP
rs558225133 2293 dbSNP
rs1362511814 2294 dbSNP
rs113562092 2300 dbSNP
rs1028168089 2302 dbSNP
rs1274687608 2302 dbSNP
rs755004115 2308 dbSNP
rs111295265 2309 dbSNP
rs1197803935 2317 dbSNP
rs766215968 2318 dbSNP
rs1462799955 2319 dbSNP
rs1188146711 2320 dbSNP
rs567489563 2322 dbSNP
rs1042203425 2327 dbSNP
rs1472511539 2328 dbSNP
rs751280142 2335 dbSNP
rs188395143 2336 dbSNP
rs900327603 2347 dbSNP
rs530940792 2350 dbSNP
rs761311972 2353 dbSNP
rs980308793 2354 dbSNP
rs565356778 2356 dbSNP
rs1340328330 2360 dbSNP
rs944564765 2369 dbSNP
rs1340798835 2370 dbSNP
rs1217603390 2371 dbSNP
rs60056748 2372 dbSNP
rs1454279943 2374 dbSNP
rs1406345242 2380 dbSNP
rs1047399587 2383 dbSNP
rs733451 2384 dbSNP
rs150847108 2391 dbSNP
rs1440574508 2392 dbSNP
rs973164858 2394 dbSNP
rs941560645 2398 dbSNP
rs1265386652 2401 dbSNP
rs1017070570 2407 dbSNP
rs1193204151 2412 dbSNP
rs927464630 2417 dbSNP
rs1160749164 2422 dbSNP
rs1173488568 2430 dbSNP
rs980325166 2432 dbSNP
rs376517758 2434 dbSNP
rs1402148666 2448 dbSNP
rs60631552 2452 dbSNP
rs141484077 2453 dbSNP
rs1398785156 2456 dbSNP
rs733452 2463 dbSNP
rs1187700917 2467 dbSNP
rs1233729772 2471 dbSNP
rs1274002812 2481 dbSNP
rs116075903 2485 dbSNP
rs1286283369 2486 dbSNP
rs1288325481 2486 dbSNP
rs1488666621 2487 dbSNP
rs1215902333 2491 dbSNP
rs1020859103 2497 dbSNP
rs1453497160 2502 dbSNP
rs1200087453 2503 dbSNP
rs1205693390 2506 dbSNP
rs1160985772 2510 dbSNP
rs1355511319 2511 dbSNP
rs1033543473 2512 dbSNP
rs1000282184 2519 dbSNP
rs893660772 2528 dbSNP
rs1392493932 2531 dbSNP
rs1054912475 2534 dbSNP
rs577695584 2536 dbSNP
rs1329122488 2548 dbSNP
rs1241978169 2552 dbSNP
rs116517980 2556 dbSNP
rs1008831999 2564 dbSNP
rs1383082807 2569 dbSNP
rs1296368865 2570 dbSNP
rs905984160 2572 dbSNP
rs1239544502 2574 dbSNP
rs534323740 2575 dbSNP
rs1047621197 2578 dbSNP
rs1044406916 2583 dbSNP
rs950058976 2586 dbSNP
rs993599981 2590 dbSNP
rs898824342 2591 dbSNP
rs1239338762 2601 dbSNP
rs1037894863 2602 dbSNP
rs1170659848 2604 dbSNP
rs937723124 2604 dbSNP
rs1156347423 2608 dbSNP
rs1390629208 2610 dbSNP
rs1161763460 2630 dbSNP
rs1458146753 2635 dbSNP
rs917486592 2644 dbSNP
rs771344384 2649 dbSNP
rs1426555192 2675 dbSNP
rs371016054 2683 dbSNP
rs1475559375 2686 dbSNP
rs553272178 2691 dbSNP
rs1044516496 2692 dbSNP
rs730592 2714 dbSNP
rs917525221 2715 dbSNP
rs373755441 2724 dbSNP
rs76623586 2729 dbSNP
rs115351680 2735 dbSNP
rs372759787 2739 dbSNP
rs925934777 2745 dbSNP
rs1342331263 2754 dbSNP
rs1245523268 2769 dbSNP
rs183729234 2772 dbSNP
rs921049211 2785 dbSNP
rs1332886066 2794 dbSNP
rs754911088 2796 dbSNP
rs1259074037 2804 dbSNP
rs550920439 2806 dbSNP
rs191292964 2807 dbSNP
rs34510970 2811 dbSNP
rs1017466976 2812 dbSNP
rs1008758471 2813 dbSNP
rs1273253482 2814 dbSNP
rs1212484287 2821 dbSNP
rs1366376732 2821 dbSNP
rs35630498 2823 dbSNP
rs1466844557 2824 dbSNP
rs563278905 2830 dbSNP
rs369882924 2836 dbSNP
rs1464055333 2840 dbSNP
rs993426839 2845 dbSNP
rs898828794 2850 dbSNP
rs1272348575 2852 dbSNP
rs1431858520 2855 dbSNP
rs751543444 2860 dbSNP
rs377627980 2861 dbSNP
rs1406868064 2862 dbSNP
rs1353843885 2868 dbSNP
rs1032171254 2869 dbSNP
rs1001924196 2870 dbSNP
rs1366322014 2872 dbSNP
rs537648872 2879 dbSNP
rs1167999969 2882 dbSNP
rs1408495441 2883 dbSNP
rs8112280 2885 dbSNP
rs1046115663 2886 dbSNP
rs779643200 2888 dbSNP
rs1477552695 2889 dbSNP
rs917420028 2890 dbSNP
rs1422400009 2891 dbSNP
rs1476735041 2897 dbSNP
rs1427146111 2902 dbSNP
rs1201572348 2906 dbSNP
rs895832968 2908 dbSNP
rs1053780570 2909 dbSNP
rs1490484411 2915 dbSNP
rs1250514948 2923 dbSNP
rs1373694405 2928 dbSNP
rs934893155 2932 dbSNP
rs1401856904 2933 dbSNP
rs1299035412 2938 dbSNP
rs925958335 2945 dbSNP
rs1201810536 2951 dbSNP
rs140019375 2958 dbSNP
rs943332796 2959 dbSNP
rs1273184310 2964 dbSNP
rs910668680 2965 dbSNP
rs1233159979 2969 dbSNP
rs1215555976 2980 dbSNP
rs987546772 2990 dbSNP
rs932851841 2991 dbSNP
rs1488994485 2992 dbSNP
rs1216619861 2997 dbSNP
rs920996935 2998 dbSNP
rs1281745019 3000 dbSNP
rs954566559 3002 dbSNP
rs1484673939 3009 dbSNP
rs532983035 3016 dbSNP
rs1026109830 3019 dbSNP
rs1432579150 3021 dbSNP
rs1346690386 3030 dbSNP
rs961606673 3040 dbSNP
rs964987461 3044 dbSNP
rs1421628317 3045 dbSNP
rs1440031788 3046 dbSNP
rs972400369 3048 dbSNP
rs559756045 3049 dbSNP
rs1016363421 3054 dbSNP
rs1001851913 3055 dbSNP
rs1428854090 3063 dbSNP
rs79810388 3072 dbSNP
rs79026632 3073 dbSNP
rs1002025090 3076 dbSNP
rs1301891057 3086 dbSNP
rs969228342 3106 dbSNP
rs1023025681 3107 dbSNP
rs563579720 3108 dbSNP
rs1178317105 3111 dbSNP
rs895780875 3112 dbSNP
rs1037033472 3140 dbSNP
rs543302577 3144 dbSNP
rs1246869294 3157 dbSNP
rs1488036760 3163 dbSNP
rs1004656825 3164 dbSNP
rs888693326 3183 dbSNP
rs1480757401 3184 dbSNP
rs1049148667 3185 dbSNP
rs895978830 3188 dbSNP
rs1167197022 3200 dbSNP
rs114229478 3203 dbSNP
rs900026078 3205 dbSNP
rs1040729822 3206 dbSNP
rs934925071 3213 dbSNP
rs111897418 3224 dbSNP
rs564026134 3229 dbSNP
rs1370558274 3230 dbSNP
rs1229468418 3231 dbSNP
rs1233123333 3244 dbSNP
rs1209046564 3247 dbSNP
rs60908248 3249 dbSNP
rs571733138 3250 dbSNP
rs1205951859 3254 dbSNP
rs987809180 3274 dbSNP
rs554974566 3275 dbSNP
rs1456319532 3286 dbSNP
rs1222164018 3294 dbSNP
rs1043316775 3296 dbSNP
rs943383660 3307 dbSNP
rs1474984200 3308 dbSNP
rs541410565 3311 dbSNP
rs114972219 3313 dbSNP
rs557631582 3314 dbSNP
rs763627664 3320 dbSNP
rs1328777372 3321 dbSNP
rs1404168428 3326 dbSNP
rs1449612060 3330 dbSNP
rs919098085 3337 dbSNP
rs1284254677 3339 dbSNP
rs1024817173 3343 dbSNP
rs1231070819 3346 dbSNP
rs75949062 3350 dbSNP
rs960103588 3352 dbSNP
rs963527794 3353 dbSNP
rs1387854623 3361 dbSNP
rs142766795 3362 dbSNP
rs558298922 3363 dbSNP
rs1004201629 3367 dbSNP
rs1408124185 3369 dbSNP
rs1475034140 3372 dbSNP
rs969027321 3375 dbSNP
rs1024560497 3377 dbSNP
rs1027211338 3378 dbSNP
rs1167651390 3378 dbSNP
rs888466531 3378 dbSNP
rs1418052902 3379 dbSNP
rs1442455843 3381 dbSNP
rs535091293 3386 dbSNP
rs1299663611 3387 dbSNP
rs997064418 3387 dbSNP
rs1340706151 3388 dbSNP
rs566154859 3389 dbSNP
rs900130975 3392 dbSNP
rs1260486997 3396 dbSNP
rs1041186979 3397 dbSNP
rs11433492 3398 dbSNP
rs1417026789 3398 dbSNP
rs1491028367 3398 dbSNP
rs201380555 3398 dbSNP
rs3214453 3398 dbSNP
rs765135174 3398 dbSNP
rs1488726334 3399 dbSNP
rs1491200754 3399 dbSNP
rs1192971143 3405 dbSNP
rs944236742 3421 dbSNP
rs1479323904 3427 dbSNP
rs1173687390 3439 dbSNP
rs1394939292 3443 dbSNP
rs138462607 3459 dbSNP
rs892195058 3467 dbSNP
rs1360829239 3476 dbSNP
rs77203106 3477 dbSNP
rs1031148837 3480 dbSNP
rs999061550 3482 dbSNP
rs1275913714 3483 dbSNP
rs1436844742 3483 dbSNP
rs773003136 3483 dbSNP
rs1302620220 3485 dbSNP
rs980643876 3485 dbSNP
rs543881649 3487 dbSNP
rs1345583998 3496 dbSNP
rs1232242636 3497 dbSNP
rs759940778 3498 dbSNP
rs1354773780 3500 dbSNP
rs1204762082 3504 dbSNP
rs1259846922 3507 dbSNP
rs917876062 3508 dbSNP
rs187986980 3517 dbSNP
rs774617573 3518 dbSNP
rs183882137 3519 dbSNP
rs1180038673 3539 dbSNP
rs2287827 3546 dbSNP
rs1051738458 3556 dbSNP
rs933421435 3559 dbSNP
rs1392380403 3565 dbSNP
rs1405760729 3582 dbSNP
rs1026939171 3583 dbSNP
rs1368750268 3584 dbSNP
rs1448900771 3584 dbSNP
rs1311632139 3589 dbSNP
rs1386734768 3591 dbSNP
rs1163886103 3598 dbSNP
rs1336445834 3598 dbSNP
rs996835343 3600 dbSNP
rs564281202 3604 dbSNP
rs1448474305 3615 dbSNP
rs2287826 3617 dbSNP
rs1358680442 3618 dbSNP
rs769994355 3623 dbSNP
rs143825910 3624 dbSNP
rs1467568126 3630 dbSNP
rs941909542 3638 dbSNP
rs561440082 3653 dbSNP
rs892640587 3657 dbSNP
rs909008378 3659 dbSNP
rs980660732 3661 dbSNP
rs1239248468 3665 dbSNP
rs541471896 3668 dbSNP
rs575946532 3676 dbSNP
rs370416407 3677 dbSNP
rs1001025043 3686 dbSNP
rs1472903986 3689 dbSNP
rs991809133 3691 dbSNP
rs956560044 3692 dbSNP
rs1294013646 3694 dbSNP
rs1395638918 3700 dbSNP
rs544059904 3717 dbSNP
rs746860638 3724 dbSNP
rs1390916947 3729 dbSNP
rs1247041434 3734 dbSNP
rs1030783714 3735 dbSNP
rs1001020155 3742 dbSNP
rs578125226 3745 dbSNP
rs968918011 3749 dbSNP
rs1044746277 3752 dbSNP
rs1333152137 3754 dbSNP
rs1021768307 3757 dbSNP
rs1307129039 3762 dbSNP
rs1007829255 3765 dbSNP
rs1193613617 3766 dbSNP
rs889348938 3772 dbSNP
rs1257654574 3773 dbSNP
rs1442702302 3775 dbSNP
rs1293244752 3777 dbSNP
rs1415128295 3778 dbSNP
rs1478699304 3779 dbSNP
rs1171069378 3789 dbSNP
rs947731027 3791 dbSNP
rs1052001575 3793 dbSNP
rs558411002 3801 dbSNP
rs1296594594 3807 dbSNP
rs780040057 3822 dbSNP
rs1302420269 3824 dbSNP
rs1415399531 3848 dbSNP
rs1312528383 3849 dbSNP
rs997556882 3851 dbSNP
rs77748086 3858 dbSNP
rs1036490200 3860 dbSNP
rs940508807 3864 dbSNP
rs907710839 3870 dbSNP
rs942073114 3872 dbSNP
rs1347982152 3877 dbSNP
rs1209481041 3878 dbSNP
rs909060739 3884 dbSNP
rs1489055702 3885 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_ControlA_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uuuaaucCAUCACCGUCACCuu 5'
                 | :||  ||||||  
Target 5' -----guGAGGUCACAGUGG-- 3'
1 - 15
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_ControlA_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control A
Location of target site ENST00000391743.3 | 3UTR | GUGAGGUCACAGUGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
82 hsa-miR-6509-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055374 PDCD4 programmed cell death 4 2 4
MIRT378341 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT444668 CDKL2 cyclin dependent kinase like 2 2 2
MIRT446953 CD248 CD248 molecule 2 2
MIRT460332 CAMK4 calcium/calmodulin dependent protein kinase IV 2 6
MIRT464078 VPS4A vacuolar protein sorting 4 homolog A 2 2
MIRT464586 UBN2 ubinuclein 2 2 2
MIRT468482 SESN3 sestrin 3 2 2
MIRT468962 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT475455 HSPA8 heat shock protein family A (Hsp70) member 8 2 2
MIRT482403 ADRB1 adrenoceptor beta 1 2 10
MIRT486992 ZFAND2B zinc finger AN1-type containing 2B 2 2
MIRT489397 TUBB2A tubulin beta 2A class IIa 2 2
MIRT526319 UGT2A1 UDP glucuronosyltransferase family 2 member A1 complex locus 2 2
MIRT526560 UGT2A2 UDP glucuronosyltransferase family 2 member A2 2 2
MIRT526732 ZNF138 zinc finger protein 138 2 8
MIRT531581 STXBP5L syntaxin binding protein 5 like 2 2
MIRT532011 NOX5 NADPH oxidase 5 2 2
MIRT533407 TXLNG taxilin gamma 2 2
MIRT533436 TRPC5 transient receptor potential cation channel subfamily C member 5 2 2
MIRT533866 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT539254 ANKRD50 ankyrin repeat domain 50 2 2
MIRT541451 C15orf48 chromosome 15 open reading frame 48 2 2
MIRT566794 MIER3 MIER family member 3 2 2
MIRT569294 SURF6 surfeit 6 2 2
MIRT571336 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT572802 PPP3CB protein phosphatase 3 catalytic subunit beta 2 2
MIRT572813 MYO1C myosin IC 2 2
MIRT574219 DMRT2 doublesex and mab-3 related transcription factor 2 2 2
MIRT607259 GRAMD1B GRAM domain containing 1B 2 4
MIRT609307 CHD4 chromodomain helicase DNA binding protein 4 2 2
MIRT615459 REPS1 RALBP1 associated Eps domain containing 1 2 2
MIRT616861 RPLP1 ribosomal protein lateral stalk subunit P1 2 2
MIRT619415 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT619652 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT625325 TNFRSF13B TNF receptor superfamily member 13B 2 2
MIRT638980 ARFIP2 ADP ribosylation factor interacting protein 2 2 2
MIRT639458 ZNF429 zinc finger protein 429 2 2
MIRT640550 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT641473 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT642720 ATXN3 ataxin 3 2 2
MIRT643048 SMN1 survival of motor neuron 1, telomeric 2 2
MIRT644921 SMN2 survival of motor neuron 2, centromeric 2 2
MIRT645875 ZNF275 zinc finger protein 275 2 2
MIRT649824 LIPG lipase G, endothelial type 2 2
MIRT649851 GYS2 glycogen synthase 2 2 2
MIRT649972 TRAFD1 TRAF-type zinc finger domain containing 1 2 2
MIRT650675 ZNF259 ZPR1 zinc finger 1 1
MIRT651319 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT652876 TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 2 2
MIRT652881 SYVN1 synoviolin 1 2 2
MIRT654144 RPAP2 RNA polymerase II associated protein 2 2 2
MIRT657080 JMY junction mediating and regulatory protein, p53 cofactor 2 2
MIRT657181 INO80C INO80 complex subunit C 2 2
MIRT657830 GJD3 gap junction protein delta 3 2 2
MIRT657897 GDF7 growth differentiation factor 7 2 2
MIRT659631 CDKN2AIP CDKN2A interacting protein 2 2
MIRT663115 SPTA1 spectrin alpha, erythrocytic 1 2 2
MIRT664739 METTL16 methyltransferase like 16 2 2
MIRT667551 LRAT lecithin retinol acyltransferase 2 2
MIRT668552 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT682893 XIAP X-linked inhibitor of apoptosis 2 2
MIRT683092 PRRG4 proline rich and Gla domain 4 2 2
MIRT683102 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT697648 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT709158 ZNF419 zinc finger protein 419 2 2
MIRT713220 RCAN2 regulator of calcineurin 2 2 2
MIRT713277 LAIR1 leukocyte associated immunoglobulin like receptor 1 2 2
MIRT715008 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT715051 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT715696 PNMAL2 paraneoplastic Ma antigen family member 8B 2 2
MIRT717250 TMEM246 transmembrane protein 246 2 2
MIRT717322 PGK1 phosphoglycerate kinase 1 2 2
MIRT717587 MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like 2 2
MIRT718122 CHST4 carbohydrate sulfotransferase 4 2 2
MIRT718418 CALN1 calneuron 1 2 2
MIRT718750 ZNF490 zinc finger protein 490 2 2
MIRT720048 PPP1R3F protein phosphatase 1 regulatory subunit 3F 2 2
MIRT721497 THRB thyroid hormone receptor beta 2 2
MIRT722531 EPRS glutamyl-prolyl-tRNA synthetase 2 2
MIRT723279 KRTAP21-2 keratin associated protein 21-2 2 2
MIRT724813 MSX2 msh homeobox 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6509-3p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-6509-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6509-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-6509-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-6509-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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