pre-miRNA Information
pre-miRNA hsa-mir-4772   
Genomic Coordinates chr2: 102432289 - 102432366
Description Homo sapiens miR-4772 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4772-3p
Sequence 48| CCUGCAACUUUGCCUGAUCAGA |69
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 6 2 + 102432341 29233923 MiREDiBase
A-to-I 7 2 + 102432342 23291724, 27587585, 29233923 MiREDiBase
A-to-I 20 2 + 102432355 29233923 MiREDiBase
A-to-I 22 2 + 102432357 29233923 MiREDiBase
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN28593220 7 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1256302752 1 dbSNP
rs1235136670 6 dbSNP
rs1321744784 8 dbSNP
rs1009816485 11 dbSNP
rs1022342638 21 dbSNP
Putative Targets

Gene Information
Gene Symbol RNF19B   
Synonyms IBRDC3, NKLAM
Description ring finger protein 19B
Transcript NM_001127361   
Other Transcripts NM_153341   
Expression
Putative miRNA Targets on RNF19B
3'UTR of RNF19B
(miRNA target sites are highlighted)
>RNF19B|NM_001127361|3'UTR
   1 CTCAGCAAAGTGGATTTTGTCTCCACAGAGAATGCAACAATATGGAAATCCAAGTGGACATTGAAGCCAAACCAAGCCAC
  81 TATCAGCTGGTGAGTGGAAGCAGCACGGAGGACTCGCTCCATGTTCATGCTCAGATGGCAGAGAATGAAGAAGAAGGTAG
 161 TGGTGGCGGAGGCAGTGAAGAGGATCCCCCCTGCAGACACCAAAGCTGTGAACAGAAAGACTGCCTGGCCAGCAAACCTT
 241 GGGACATCAGCCTGGCCCAGCCTGAAAGCATCCGCAGTGACCTAGAGAGTTCTGATGCACAGTCAGACGATGTGCCAGAC
 321 ATCACCTCAGATGAGTGTGGCTCCCCCCGCTCCCATACTGCAGCCTGCCCCTCGACCCCCAGAGCCCAAGGTGCACCGAG
 401 CCCAAGTGCCCATATGAACCTCTCTGCCCTAGCCGAGGGACAAACTGTCTTGAAGCCAGAAGGTGGAGAAGCCAGAGTAT
 481 GAAGTGGAATGAATGCTCCTGTTCTGAGAAGCACACTTGTAACTGCATCTTTTGGAATTTTTTTTTTTTTTTTTCCAAGG
 561 GGTAGAGATTTATGTATTTTATTTCACAGATTCTCTGGTCACAGGTTTTTGCCCAGGGAAATTCTGAGAAATTCACAATT
 641 TCTTACCAGATAAAACATGAAAAGTTTGCCGTTAGTTCCCCTCCCCTCCCCTCCCTCTTTTTAGTTTTAATTTATTGGTT
 721 AAACTGATGGCAGCAATCCATGAGGTGTGTCAAAGAGTGTACATATGTATGTGTGTATATTGAATGCTAAACATATTACT
 801 GAAAGACACATTTTAATAAAGATTTCTGTCATAATTCAACTT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agacuagUCCGUUUCAACGUcc 5'
                 || | ||| ||||  
Target 5' cccccagAGCCCAAGGTGCAcc 3'
376 - 397 107.00 -7.00
2
miRNA  3' agacuagUCCGUU-UCAACGUCc 5'
                 |||:|: :|| ||:| 
Target 5' aagaagaAGGTAGTGGTGGCGGa 3'
148 - 170 107.00 -12.00
3
miRNA  3' agACUAGUCCGUUUC-AACGUCc 5'
            || ||| ||  || | |||| 
Target 5' caTGTTCATGCTCAGATGGCAGa 3'
120 - 142 104.00 -9.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30487951 12 COSMIC
COSM5222103 23 COSMIC
COSM6250634 51 COSMIC
COSM8651012 51 COSMIC
COSM6567119 63 COSMIC
COSM8337655 80 COSMIC
COSM5518134 98 COSMIC
COSM7195437 106 COSMIC
COSM3400687 107 COSMIC
COSM3865340 112 COSMIC
COSM5006010 116 COSMIC
COSM5478503 122 COSMIC
COSM9101481 130 COSMIC
COSM1194922 147 COSMIC
COSM1734280 147 COSMIC
COSM908374 155 COSMIC
COSM8264820 166 COSMIC
COSM6767558 167 COSMIC
COSM1602228 168 COSMIC
COSM908373 169 COSMIC
COSM6767559 185 COSMIC
COSM2078505 186 COSMIC
COSM3488250 186 COSMIC
COSM8040842 187 COSMIC
COSM9753128 187 COSMIC
COSM3488249 188 COSMIC
COSM6063391 189 COSMIC
COSM9392285 189 COSMIC
COSM4031551 191 COSMIC
COSM9817645 193 COSMIC
COSM9817644 196 COSMIC
COSM464455 208 COSMIC
COSM3966530 223 COSMIC
COSM8097352 225 COSMIC
COSM9817643 236 COSMIC
COSM7895976 237 COSMIC
COSM7895986 238 COSMIC
COSM8482598 255 COSMIC
COSM4031550 263 COSMIC
COSM9086926 273 COSMIC
COSM8854088 279 COSMIC
COSM9817642 296 COSMIC
COSM7764334 297 COSMIC
COSM9038226 308 COSMIC
COSM8237711 340 COSMIC
COSM7220161 342 COSMIC
COSM2078503 343 COSMIC
COSM2078502 352 COSMIC
COSM1185399 358 COSMIC
COSM6540291 360 COSMIC
COSM8318172 365 COSMIC
COSM2078501 373 COSMIC
COSM5021269 374 COSMIC
COSM5570297 376 COSMIC
COSM4031549 377 COSMIC
COSM3488248 378 COSMIC
COSM5969367 397 COSMIC
COSM7606978 398 COSMIC
COSM6870579 401 COSMIC
COSM8903765 404 COSMIC
COSM4477142 410 COSMIC
COSM8498155 415 COSMIC
COSM5443175 426 COSMIC
COSM534895 435 COSMIC
COSM5665585 435 COSMIC
COSM2078499 452 COSMIC
COSM7725099 473 COSMIC
COSM6767557 474 COSMIC
COSM5992611 476 COSMIC
COSN30138693 496 COSMIC
COSN28867236 537 COSMIC
COSN20094663 538 COSMIC
COSN22555251 554 COSMIC
COSN30163382 572 COSMIC
COSN6034040 575 COSMIC
COSN18725921 591 COSMIC
COSN31548810 593 COSMIC
COSN31547973 606 COSMIC
COSN30121107 661 COSMIC
COSN28887977 677 COSMIC
COSN31547975 821 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1323640766 3 dbSNP
rs1290678400 9 dbSNP
rs372127662 10 dbSNP
rs773549167 12 dbSNP
rs765616862 23 dbSNP
rs761799171 26 dbSNP
rs987775150 30 dbSNP
rs776711233 33 dbSNP
rs1376592319 37 dbSNP
rs780205603 44 dbSNP
rs1028261054 47 dbSNP
rs768632738 51 dbSNP
rs1350904974 62 dbSNP
rs1454125262 67 dbSNP
rs1031478793 71 dbSNP
rs745770373 73 dbSNP
rs774304731 78 dbSNP
rs372584778 82 dbSNP
rs749138177 88 dbSNP
rs368843944 89 dbSNP
rs141345077 93 dbSNP
rs544655223 94 dbSNP
rs755724620 95 dbSNP
rs1489426974 99 dbSNP
rs747769624 104 dbSNP
rs75240537 106 dbSNP
rs182126539 107 dbSNP
rs1346938958 115 dbSNP
rs752078296 116 dbSNP
rs780757574 121 dbSNP
rs1353516098 123 dbSNP
rs1336289281 124 dbSNP
rs369736730 127 dbSNP
rs758587378 129 dbSNP
rs1368940023 136 dbSNP
rs750888032 137 dbSNP
rs1010445615 146 dbSNP
rs1293411295 151 dbSNP
rs1396445505 152 dbSNP
rs750549922 157 dbSNP
rs765527865 157 dbSNP
rs1435181517 158 dbSNP
rs140794854 161 dbSNP
rs542372584 167 dbSNP
rs574862590 168 dbSNP
rs1359428729 180 dbSNP
rs376440568 182 dbSNP
rs370533666 186 dbSNP
rs770919919 187 dbSNP
rs762881563 188 dbSNP
rs772933089 190 dbSNP
rs1164322765 197 dbSNP
rs769495333 199 dbSNP
rs1044078794 200 dbSNP
rs747793270 203 dbSNP
rs1210523265 207 dbSNP
rs1484804200 214 dbSNP
rs1488092543 215 dbSNP
rs780745942 223 dbSNP
rs1033960418 224 dbSNP
rs1212716870 227 dbSNP
rs1313112519 239 dbSNP
rs768188822 242 dbSNP
rs1482001078 246 dbSNP
rs746577302 250 dbSNP
rs780704125 253 dbSNP
rs1279545335 254 dbSNP
rs1400019508 256 dbSNP
rs1252511292 258 dbSNP
rs1339471643 260 dbSNP
rs949871885 263 dbSNP
rs758909209 269 dbSNP
rs750980955 273 dbSNP
rs373889408 274 dbSNP
rs1175350738 276 dbSNP
rs757597383 278 dbSNP
rs754063635 282 dbSNP
rs764275409 287 dbSNP
rs760737343 288 dbSNP
rs752703301 292 dbSNP
rs767594434 293 dbSNP
rs1293356512 295 dbSNP
rs940153241 296 dbSNP
rs1373245672 298 dbSNP
rs144995081 307 dbSNP
rs773164054 308 dbSNP
rs769599278 309 dbSNP
rs921299559 311 dbSNP
rs761560303 315 dbSNP
rs776336557 316 dbSNP
rs778843452 319 dbSNP
rs768261133 320 dbSNP
rs746665097 322 dbSNP
rs868429507 323 dbSNP
rs779653345 325 dbSNP
rs1302056544 331 dbSNP
rs1342131971 333 dbSNP
rs1296024947 335 dbSNP
rs771734740 337 dbSNP
rs1402409006 343 dbSNP
rs1171257963 344 dbSNP
rs371692185 345 dbSNP
rs35756506 347 dbSNP
rs367642616 348 dbSNP
rs1203386837 349 dbSNP
rs199935869 349 dbSNP
rs756268186 350 dbSNP
rs768014132 351 dbSNP
rs956090525 353 dbSNP
rs1032832067 358 dbSNP
rs752934272 360 dbSNP
rs376240014 364 dbSNP
rs755089134 369 dbSNP
rs201577562 371 dbSNP
rs202139079 373 dbSNP
rs35462688 374 dbSNP
rs776223358 380 dbSNP
rs144070969 385 dbSNP
rs899279352 386 dbSNP
rs1459960185 391 dbSNP
rs146339486 394 dbSNP
rs775317758 397 dbSNP
rs138818373 398 dbSNP
rs774911417 400 dbSNP
rs771273704 401 dbSNP
rs749811909 402 dbSNP
rs777947420 404 dbSNP
rs756497357 405 dbSNP
rs910560391 406 dbSNP
rs1190763546 409 dbSNP
rs1381305212 414 dbSNP
rs748338174 416 dbSNP
rs781441186 419 dbSNP
rs373819199 420 dbSNP
rs1211140790 424 dbSNP
rs1488502788 425 dbSNP
rs751655079 428 dbSNP
rs766485902 431 dbSNP
rs757085052 434 dbSNP
rs371235809 435 dbSNP
rs146151931 436 dbSNP
rs199961427 438 dbSNP
rs760591116 439 dbSNP
rs1332086675 442 dbSNP
rs1303268604 443 dbSNP
rs775263133 446 dbSNP
rs939769352 447 dbSNP
rs753653914 448 dbSNP
rs35877809 449 dbSNP
rs1214859541 450 dbSNP
rs767339468 456 dbSNP
rs1361340485 457 dbSNP
rs1158436103 463 dbSNP
rs888645360 469 dbSNP
rs746417554 472 dbSNP
rs759228193 474 dbSNP
rs1267971556 477 dbSNP
rs569280795 483 dbSNP
rs376871991 488 dbSNP
rs542423584 489 dbSNP
rs749713428 491 dbSNP
rs773748872 495 dbSNP
rs1182339069 497 dbSNP
rs1286226154 498 dbSNP
rs770120592 499 dbSNP
rs748568922 504 dbSNP
rs781386050 514 dbSNP
rs1482406354 515 dbSNP
rs1257739638 518 dbSNP
rs1233865327 519 dbSNP
rs932945052 523 dbSNP
rs768801633 528 dbSNP
rs747270919 532 dbSNP
rs1341389856 533 dbSNP
rs61800888 536 dbSNP
rs77571825 538 dbSNP
rs1476098356 541 dbSNP
rs1329606584 547 dbSNP
rs921478178 550 dbSNP
rs1242239241 553 dbSNP
rs371817016 554 dbSNP
rs1174487321 555 dbSNP
rs1204606829 555 dbSNP
rs1491083049 555 dbSNP
rs200262373 555 dbSNP
rs36040674 555 dbSNP
rs56815463 555 dbSNP
rs572538910 555 dbSNP
rs1459749029 557 dbSNP
rs1270470478 562 dbSNP
rs117807710 566 dbSNP
rs1349097567 570 dbSNP
rs944013614 574 dbSNP
rs913884521 576 dbSNP
rs1376172453 578 dbSNP
rs894789183 581 dbSNP
rs977264339 586 dbSNP
rs868520875 595 dbSNP
rs1315060444 598 dbSNP
rs968514997 602 dbSNP
rs1435572124 603 dbSNP
rs1375902958 611 dbSNP
rs1172800662 614 dbSNP
rs1271472161 620 dbSNP
rs958139753 621 dbSNP
rs1177660704 622 dbSNP
rs1472075351 624 dbSNP
rs1469223308 633 dbSNP
rs190353480 634 dbSNP
rs1485786323 647 dbSNP
rs1279093415 649 dbSNP
rs1209217145 658 dbSNP
rs1308398967 659 dbSNP
rs1216869491 660 dbSNP
rs61800887 661 dbSNP
rs1295192300 669 dbSNP
rs185878371 670 dbSNP
rs969968942 671 dbSNP
rs1022857198 673 dbSNP
rs1464373878 678 dbSNP
rs1346718794 681 dbSNP
rs1450558829 682 dbSNP
rs1035779014 686 dbSNP
rs1159792163 690 dbSNP
rs763076744 693 dbSNP
rs1203439621 696 dbSNP
rs1400034585 696 dbSNP
rs1002508825 703 dbSNP
rs1256396447 707 dbSNP
rs867982358 712 dbSNP
rs1185319826 713 dbSNP
rs8040 717 dbSNP
rs1004405202 731 dbSNP
rs775873222 753 dbSNP
rs993692711 759 dbSNP
rs888196200 763 dbSNP
rs899309251 773 dbSNP
rs1234006436 780 dbSNP
rs932788045 781 dbSNP
rs900106541 782 dbSNP
rs772414779 787 dbSNP
rs1353761653 791 dbSNP
rs194638 793 dbSNP
rs1411658828 797 dbSNP
rs1386365191 798 dbSNP
rs944289387 806 dbSNP
rs913924855 809 dbSNP
rs1461553608 811 dbSNP
rs988155809 817 dbSNP
rs889172515 828 dbSNP
rs1162300800 831 dbSNP
rs1442271291 832 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_ControlA_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' agACUAGUCCGU-UUCAACgucc 5'
            ||:  ||||| |:||||    
Target 5' ccUGGGGAGGCAGAGGUUG---- 3'
2 - 20
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_ControlA_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control A
Location of target site ENST00000356990.5 | 3UTR | GCCUGGGGAGGCAGAGGUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
313 hsa-miR-4772-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT079462 RAB40B RAB40B, member RAS oncogene family 2 2
MIRT092011 SNRK SNF related kinase 2 10
MIRT259504 TXLNG taxilin gamma 2 2
MIRT286668 ZNF207 zinc finger protein 207 2 2
MIRT393055 RSBN1L round spermatid basic protein 1 like 2 2
MIRT443335 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT443430 MAPT microtubule associated protein tau 2 2
MIRT454267 PSMA1 proteasome subunit alpha 1 2 2
MIRT461774 MPDU1 mannose-P-dolichol utilization defect 1 2 2
MIRT473561 MATR3 matrin 3 2 2
MIRT495678 PRKD3 protein kinase D3 2 2
MIRT502649 DCTN5 dynactin subunit 5 2 8
MIRT503958 ZNF180 zinc finger protein 180 2 6
MIRT504114 GPR158 G protein-coupled receptor 158 2 2
MIRT513556 IL5 interleukin 5 2 2
MIRT529025 EXOC8 exocyst complex component 8 2 2
MIRT530632 PPIC peptidylprolyl isomerase C 2 4
MIRT536889 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT537224 GATA6 GATA binding protein 6 2 6
MIRT539006 AVL9 AVL9 cell migration associated 2 2
MIRT539129 ARHGEF17 Rho guanine nucleotide exchange factor 17 2 2
MIRT539572 CNKSR3 CNKSR family member 3 2 2
MIRT556145 MED12L mediator complex subunit 12 like 2 2
MIRT559481 ARL8A ADP ribosylation factor like GTPase 8A 2 2
MIRT560095 ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit 2 2
MIRT561661 RNF11 ring finger protein 11 2 4
MIRT569672 SEC23B Sec23 homolog B, coat complex II component 2 4
MIRT571883 MSL2 MSL complex subunit 2 2 2
MIRT575071 Ets1 E26 avian leukemia oncogene 1, 5' domain 2 4
MIRT607053 IDS iduronate 2-sulfatase 2 2
MIRT607801 RHBDL2 rhomboid like 2 2 4
MIRT608145 SYAP1 synapse associated protein 1 2 4
MIRT609242 SERPINA4 serpin family A member 4 2 2
MIRT612060 PDGFRA platelet derived growth factor receptor alpha 2 2
MIRT615120 BCL11B B-cell CLL/lymphoma 11B 2 2
MIRT617270 EXOSC10 exosome component 10 2 2
MIRT617684 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT618063 ZNF799 zinc finger protein 799 2 2
MIRT618101 PPP5D1 PPP5 tetratricopeptide repeat domain containing 1 2 2
MIRT618487 DENND5B DENN domain containing 5B 2 4
MIRT618801 SPATA21 spermatogenesis associated 21 2 2
MIRT618907 CDK9 cyclin dependent kinase 9 2 2
MIRT619392 RSPH3 radial spoke head 3 homolog 2 2
MIRT619896 NPTXR neuronal pentraxin receptor 2 2
MIRT620069 ZNF85 zinc finger protein 85 2 2
MIRT620085 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 2
MIRT620782 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT620859 SERPING1 serpin family G member 1 2 2
MIRT621161 RTTN rotatin 2 2
MIRT621217 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT623445 KDM5A lysine demethylase 5A 2 2
MIRT623639 IDE insulin degrading enzyme 2 2
MIRT624190 DDX19B DEAD-box helicase 19B 2 2
MIRT624699 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT624906 CTCFL CCCTC-binding factor like 2 2
MIRT624954 SERF2 small EDRK-rich factor 2 2 2
MIRT625026 ZNF730 zinc finger protein 730 2 2
MIRT625117 SLC1A5 solute carrier family 1 member 5 2 2
MIRT625129 NUP93 nucleoporin 93 2 2
MIRT625145 ITPRIPL1 inositol 1,4,5-trisphosphate receptor interacting protein-like 1 2 2
MIRT625259 ZNF566 zinc finger protein 566 2 2
MIRT625280 PNPT1 polyribonucleotide nucleotidyltransferase 1 2 2
MIRT625331 TNFRSF13B TNF receptor superfamily member 13B 2 2
MIRT625466 ZNF135 zinc finger protein 135 2 2
MIRT625525 FGFR1 fibroblast growth factor receptor 1 2 2
MIRT625724 CXorf38 chromosome X open reading frame 38 2 2
MIRT625834 NXPE2 neurexophilin and PC-esterase domain family member 2 2 2
MIRT625905 LINC00632 long intergenic non-protein coding RNA 632 2 2
MIRT626017 XRCC2 X-ray repair cross complementing 2 2 2
MIRT626048 PDE4C phosphodiesterase 4C 2 2
MIRT626166 RRP1B ribosomal RNA processing 1B 2 2
MIRT626171 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT626348 PACS1 phosphofurin acidic cluster sorting protein 1 2 2
MIRT626362 DIS3L DIS3 like exosome 3'-5' exoribonuclease 2 2
MIRT626442 SRSF7 serine and arginine rich splicing factor 7 2 2
MIRT626532 EMCN endomucin 2 2
MIRT626575 MED7 mediator complex subunit 7 2 2
MIRT626639 ZNF551 zinc finger protein 551 2 2
MIRT626666 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT626681 CISD2 CDGSH iron sulfur domain 2 2 2
MIRT626772 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 2
MIRT626788 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT626821 PRR11 proline rich 11 2 2
MIRT626831 ZNF430 zinc finger protein 430 2 2
MIRT626884 PTCD3 pentatricopeptide repeat domain 3 2 2
MIRT626941 TTR transthyretin 2 2
MIRT626960 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627454 SYNRG synergin gamma 2 2
MIRT627788 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT627821 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT627949 NMNAT1 nicotinamide nucleotide adenylyltransferase 1 2 2
MIRT627998 MELK maternal embryonic leucine zipper kinase 2 2
MIRT628019 MAP7 microtubule associated protein 7 2 2
MIRT628051 KIAA1468 KIAA1468 2 2
MIRT628129 HMGB1 high mobility group box 1 2 4
MIRT628143 HM13 histocompatibility minor 13 2 2
MIRT628237 FADS1 fatty acid desaturase 1 2 2
MIRT628794 A2ML1 alpha-2-macroglobulin like 1 2 2
MIRT628874 FAM177A1 family with sequence similarity 177 member A1 2 4
MIRT629251 KDM2B lysine demethylase 2B 2 2
MIRT629320 ZNF487P zinc finger protein 487 1 1
MIRT629361 IRAK4 interleukin 1 receptor associated kinase 4 2 2
MIRT629800 GPR82 G protein-coupled receptor 82 2 2
MIRT629919 POLR2D RNA polymerase II subunit D 2 2
MIRT630099 DCAF10 DDB1 and CUL4 associated factor 10 2 2
MIRT630487 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT630722 FPR1 formyl peptide receptor 1 2 2
MIRT631018 DNAJC22 DnaJ heat shock protein family (Hsp40) member C22 2 2
MIRT631073 ZNF829 zinc finger protein 829 2 2
MIRT631230 C7orf65 chromosome 7 open reading frame 65 2 2
MIRT631248 ABCB5 ATP binding cassette subfamily B member 5 2 2
MIRT631680 NQO2 N-ribosyldihydronicotinamide:quinone reductase 2 2 2
MIRT631780 IL17RA interleukin 17 receptor A 2 2
MIRT632044 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT632132 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT632202 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 2 2
MIRT632410 SLC30A5 solute carrier family 30 member 5 2 2
MIRT632523 PSMB2 proteasome subunit beta 2 2 2
MIRT632547 PRPF4 pre-mRNA processing factor 4 2 2
MIRT632702 MTA3 metastasis associated 1 family member 3 2 2
MIRT633134 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT633365 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT633551 ATAD3C ATPase family, AAA domain containing 3C 2 2
MIRT633698 LRRC8B leucine rich repeat containing 8 VRAC subunit B 2 2
MIRT633793 SOX7 SRY-box 7 2 2
MIRT634512 NKAP NFKB activating protein 2 2
MIRT634830 ARHGEF39 Rho guanine nucleotide exchange factor 39 2 2
MIRT634917 RBM4B RNA binding motif protein 4B 2 2
MIRT634972 C8orf17 chromosome 8 open reading frame 17 2 2
MIRT635107 MAVS mitochondrial antiviral signaling protein 2 2
MIRT635199 FXN frataxin 2 2
MIRT635407 KIAA1614 KIAA1614 2 2
MIRT635417 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT635433 LRP10 LDL receptor related protein 10 2 2
MIRT635484 ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 2 2
MIRT635513 C1orf64 steroid receptor associated and regulated protein 2 2
MIRT635617 ZNF439 zinc finger protein 439 2 2
MIRT635639 TRMT10B tRNA methyltransferase 10B 2 2
MIRT635736 IFNAR1 interferon alpha and beta receptor subunit 1 2 2
MIRT635897 SP110 SP110 nuclear body protein 2 2
MIRT635936 PLA2G12A phospholipase A2 group XIIA 2 2
MIRT636019 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 2 2
MIRT636277 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT636287 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT636344 PHAX phosphorylated adaptor for RNA export 2 2
MIRT636472 KLHL7 kelch like family member 7 2 2
MIRT636893 C5orf45 MRN complex interacting protein 2 2
MIRT636984 ZNF561 zinc finger protein 561 2 2
MIRT637041 FITM2 fat storage inducing transmembrane protein 2 2 2
MIRT637148 PCDHA6 protocadherin alpha 6 2 4
MIRT637369 ORAI2 ORAI calcium release-activated calcium modulator 2 2 4
MIRT637379 HINFP histone H4 transcription factor 2 2
MIRT637399 ZNF546 zinc finger protein 546 2 2
MIRT637721 MYOZ3 myozenin 3 2 2
MIRT637771 PDLIM3 PDZ and LIM domain 3 2 2
MIRT637905 FAM153B family with sequence similarity 153 member B 2 2
MIRT638129 UBXN7 UBX domain protein 7 2 2
MIRT638564 IFNE interferon epsilon 2 2
MIRT638581 HYPK huntingtin interacting protein K 2 2
MIRT638792 EDARADD EDAR associated death domain 2 2
MIRT638945 BMPR2 bone morphogenetic protein receptor type 2 2 2
MIRT640676 ARSK arylsulfatase family member K 2 2
MIRT641734 TXNL1 thioredoxin like 1 2 2
MIRT642163 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT642512 ORC6 origin recognition complex subunit 6 2 2
MIRT642622 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT642701 FGFR1OP2 FGFR1 oncogene partner 2 2 2
MIRT643550 C11orf70 chromosome 11 open reading frame 70 2 2
MIRT643868 COX20 COX20, cytochrome c oxidase assembly factor 2 2
MIRT643936 WIPF3 WAS/WASL interacting protein family member 3 2 2
MIRT644034 CENPM centromere protein M 2 2
MIRT644595 SPOP speckle type BTB/POZ protein 2 2
MIRT644693 ZNF320 zinc finger protein 320 2 2
MIRT645122 HES2 hes family bHLH transcription factor 2 2 2
MIRT645614 TSPAN6 tetraspanin 6 2 2
MIRT646260 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT646994 ZNF621 zinc finger protein 621 2 2
MIRT647549 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT648479 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT649069 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT649244 TRIM65 tripartite motif containing 65 2 2
MIRT649301 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT650124 G6PC glucose-6-phosphatase catalytic subunit 2 2
MIRT650167 USHBP1 USH1 protein network component harmonin binding protein 1 2 2
MIRT651263 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 2 2
MIRT652140 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT652159 TRIM66 tripartite motif containing 66 2 2
MIRT652673 TIMELESS timeless circadian clock 2 2
MIRT654237 RNF115 ring finger protein 115 2 2
MIRT655229 PEX5L peroxisomal biogenesis factor 5 like 2 2
MIRT655255 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT656064 MTMR10 myotubularin related protein 10 2 2
MIRT656575 LSM10 LSM10, U7 small nuclear RNA associated 2 2
MIRT656754 LDHA lactate dehydrogenase A 2 2
MIRT657687 GPR155 G protein-coupled receptor 155 2 2
MIRT657811 GJD3 gap junction protein delta 3 2 2
MIRT658403 FAM212B family with sequence similarity 212 member B 2 2
MIRT660211 BMPR1A bone morphogenetic protein receptor type 1A 2 2
MIRT660241 BMP7 bone morphogenetic protein 7 2 2
MIRT660450 ATG14 autophagy related 14 2 2
MIRT660546 ARHGAP29 Rho GTPase activating protein 29 2 2
MIRT660620 ANKS4B ankyrin repeat and sterile alpha motif domain containing 4B 2 2
MIRT660759 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT660987 ABHD2 abhydrolase domain containing 2 2 2
MIRT661037 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT661047 RABAC1 Rab acceptor 1 2 2
MIRT661076 FFAR2 free fatty acid receptor 2 2 2
MIRT661152 ZNF101 zinc finger protein 101 2 2
MIRT661278 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT661521 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT661710 MTO1 mitochondrial tRNA translation optimization 1 2 2
MIRT661721 KLF8 Kruppel like factor 8 2 3
MIRT661730 RAB9A RAB9A, member RAS oncogene family 2 2
MIRT662240 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662337 MYLK3 myosin light chain kinase 3 2 2
MIRT662450 SEMA5A semaphorin 5A 2 2
MIRT662743 LRRC3C leucine rich repeat containing 3C 2 2
MIRT662769 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT663012 KIAA1586 KIAA1586 2 2
MIRT663098 THEM4 thioesterase superfamily member 4 2 2
MIRT663800 BET1L Bet1 golgi vesicular membrane trafficking protein like 2 2
MIRT663878 CXorf56 chromosome X open reading frame 56 2 2
MIRT664679 TMEM19 transmembrane protein 19 2 2
MIRT664695 DBF4 DBF4 zinc finger 2 2
MIRT664762 MESDC2 mesoderm development LRP chaperone 2 2
MIRT664774 LIAS lipoic acid synthetase 2 2
MIRT664907 PDE6A phosphodiesterase 6A 2 2
MIRT664925 BHMT2 betaine--homocysteine S-methyltransferase 2 2 2
MIRT665244 ZNF384 zinc finger protein 384 2 2
MIRT665529 USP14 ubiquitin specific peptidase 14 2 2
MIRT665535 UROS uroporphyrinogen III synthase 2 2
MIRT665630 TSHZ2 teashirt zinc finger homeobox 2 2 2
MIRT665808 TMEM168 transmembrane protein 168 2 2
MIRT666151 SP2 Sp2 transcription factor 2 2
MIRT666649 RBM48 RNA binding motif protein 48 2 2
MIRT667212 NIPAL1 NIPA like domain containing 1 2 2
MIRT667514 LUC7L2 LUC7 like 2, pre-mRNA splicing factor 2 2
MIRT667541 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT667962 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT668004 HCFC2 host cell factor C2 2 2
MIRT668101 GK5 glycerol kinase 5 (putative) 2 2
MIRT668151 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT668254 FUT11 fucosyltransferase 11 2 2
MIRT668424 FAM20B FAM20B, glycosaminoglycan xylosylkinase 2 2
MIRT668468 FADS6 fatty acid desaturase 6 2 2
MIRT668849 CYCS cytochrome c, somatic 2 2
MIRT668985 CIAO1 cytosolic iron-sulfur assembly component 1 2 2
MIRT669020 MPZ myelin protein zero 2 2
MIRT669232 C7orf55-LUC7L2 C7orf55-LUC7L2 readthrough 2 2
MIRT671099 ZNF665 zinc finger protein 665 2 2
MIRT671496 SLC38A9 solute carrier family 38 member 9 2 2
MIRT672717 TMIGD2 transmembrane and immunoglobulin domain containing 2 2 2
MIRT672909 KRBA2 KRAB-A domain containing 2 2 2
MIRT672962 ZNF655 zinc finger protein 655 2 2
MIRT673609 HPSE heparanase 2 2
MIRT673740 TCF23 transcription factor 23 2 2
MIRT673755 ZNF333 zinc finger protein 333 2 2
MIRT673780 PROSER2 proline and serine rich 2 2 2
MIRT674217 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT674343 KCMF1 potassium channel modulatory factor 1 2 2
MIRT674756 QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 2 2
MIRT674811 FAM229B family with sequence similarity 229 member B 2 2
MIRT675173 BPTF bromodomain PHD finger transcription factor 2 2
MIRT675265 ZNF431 zinc finger protein 431 2 2
MIRT675954 FOXK1 forkhead box K1 2 2
MIRT676155 OGFOD1 2-oxoglutarate and iron dependent oxygenase domain containing 1 2 2
MIRT676195 GSTM3 glutathione S-transferase mu 3 2 2
MIRT676437 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT676466 RACGAP1 Rac GTPase activating protein 1 2 2
MIRT676563 VSIG1 V-set and immunoglobulin domain containing 1 2 2
MIRT676715 METTL14 methyltransferase like 14 2 2
MIRT677197 MURC caveolae associated protein 4 2 2
MIRT677276 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT677350 POC1A POC1 centriolar protein A 2 2
MIRT677507 SLC10A6 solute carrier family 10 member 6 2 2
MIRT677552 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT677621 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT677690 SCO1 SCO1, cytochrome c oxidase assembly protein 2 2
MIRT677748 GNB4 G protein subunit beta 4 2 2
MIRT678106 MICA MHC class I polypeptide-related sequence A 2 2
MIRT678336 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT678454 GLYAT glycine-N-acyltransferase 2 2
MIRT678472 RNF222 ring finger protein 222 2 2
MIRT678560 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT679302 SSBP2 single stranded DNA binding protein 2 2 2
MIRT679371 GP2 glycoprotein 2 2 2
MIRT679380 WDR92 WD repeat domain 92 2 2
MIRT679575 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT679683 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT679876 SLC25A51 solute carrier family 25 member 51 2 2
MIRT680092 ETS1 ETS proto-oncogene 1, transcription factor 2 5
MIRT680470 C3 complement C3 2 2
MIRT683082 A1BG alpha-1-B glycoprotein 2 2
MIRT683905 PSMB9 proteasome subunit beta 9 2 2
MIRT684177 MOG myelin oligodendrocyte glycoprotein 2 2
MIRT686213 ZNF267 zinc finger protein 267 2 2
MIRT688737 CNDP1 carnosine dipeptidase 1 2 2
MIRT689035 ANGPTL3 angiopoietin like 3 2 2
MIRT690683 PTCHD3 patched domain containing 3 2 2
MIRT697761 USP37 ubiquitin specific peptidase 37 2 2
MIRT704407 CTPS1 CTP synthase 1 2 2
MIRT705016 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT709567 GYG2 glycogenin 2 2 2
MIRT709955 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT710001 TXNDC12 thioredoxin domain containing 12 2 2
MIRT710219 JMJD4 jumonji domain containing 4 2 2
MIRT710478 CDH5 cadherin 5 2 2
MIRT713074 ENTHD1 ENTH domain containing 1 2 2
MIRT713890 RNF19B ring finger protein 19B 2 2
MIRT715337 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT715989 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT720098 SPTLC3 serine palmitoyltransferase long chain base subunit 3 2 2
MIRT720981 METTL21A methyltransferase like 21A 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4772-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)

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