pre-miRNA Information
pre-miRNA hsa-mir-2355   
Genomic Coordinates chr2: 207109987 - 207110073
Description Homo sapiens miR-2355 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-2355-5p
Sequence 11| AUCCCCAGAUACAAUGGACAA |31
Evidence Experimental
Experiments SOLiD
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 2 - 207110063 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1268296297 4 dbSNP
rs1361046879 5 dbSNP
rs1219551997 6 dbSNP
rs1295756820 12 dbSNP
rs1345273529 15 dbSNP
rs977145706 15 dbSNP
rs1209629984 20 dbSNP
rs759940260 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol UBAP2L   
Synonyms NICE-4, NICE4
Description ubiquitin associated protein 2 like
Transcript NM_014847   
Other Transcripts NM_001127320   
Expression
Putative miRNA Targets on UBAP2L
3'UTR of UBAP2L
(miRNA target sites are highlighted)
>UBAP2L|NM_014847|3'UTR
   1 GGCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAAGAGAA
  81 AGGAATGTGGGGGGTTTCCGCTGCCCCCCACCCCCAGCGGCCCACCCCATGCCTCAGCTTCATGTCTGTCCCATTCCTAT
 161 ACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTCTCCTTTTTTTTCCCCCTTCCATTCCTTCTCCCCTCTT
 241 GCATTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGTTCACCCTGGTGGTGTACGGATGA
 321 GGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGCCCTAAGTCTCCTTCTTTATTATTAGGAAAACAACAACA
 401 ACAACAAACAAAAAAATGGCGTCATGAATATGAACAGCATTGTCAGATGAATTAGTTGAAGTGGTTTTTTTTTTGTTTTT
 481 TTTTTTTTTTTGTACTGTGTCCTCAAATTTAATGGATTAATGTGTCTTGTATATATAAAAAGAAAACCTCTACCTTCAAA
 561 AAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aacagguaacauagACCCCUa 5'
                        |||||: 
Target 5' aagagaaaggaatgTGGGGGg 3'
74 - 94 104.00 -10.80
2
miRNA  3' aacagguaacauagaCCCCUa 5'
                         ||||| 
Target 5' gtgtacggatgaggcGGGGAg 3'
309 - 329 100.00 -10.22
3
miRNA  3' aaCAGGUAACAUAGAC---CCCua 5'
            ||||  | | ||||   |||  
Target 5' cgGTCCCATCT-TCTGAGAGGGct 3'
20 - 42 90.00 -11.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM8031540 6 COSMIC
COSM6814953 8 COSMIC
COSM7682421 14 COSMIC
COSM6893997 19 COSMIC
COSM8792403 20 COSMIC
COSM8241600 61 COSMIC
COSM896557 69 COSMIC
COSM896558 83 COSMIC
COSM5341562 100 COSMIC
COSM8751110 128 COSMIC
COSM165364 136 COSMIC
COSM6035287 170 COSMIC
COSM6024804 179 COSMIC
COSN28859876 207 COSMIC
COSN28843700 215 COSMIC
COSN26374642 324 COSMIC
COSN19634576 345 COSMIC
COSN31576853 451 COSMIC
COSN28816518 475 COSMIC
COSN17981416 476 COSMIC
COSN20068215 476 COSMIC
COSN30527650 525 COSMIC
COSN30130471 531 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs775723420 3 dbSNP
rs760840925 11 dbSNP
rs764227649 21 dbSNP
rs750407635 22 dbSNP
rs1442980604 28 dbSNP
rs766336367 29 dbSNP
rs1161546406 32 dbSNP
rs751370434 36 dbSNP
rs1217233199 39 dbSNP
rs754745944 47 dbSNP
rs780715225 49 dbSNP
rs1426477634 51 dbSNP
rs747761218 55 dbSNP
rs755648252 60 dbSNP
rs1157813787 63 dbSNP
rs1469249324 64 dbSNP
rs777317302 67 dbSNP
rs748761320 69 dbSNP
rs1480957502 73 dbSNP
rs771404472 75 dbSNP
rs774905546 77 dbSNP
rs766171635 83 dbSNP
rs772412799 87 dbSNP
rs1244504292 89 dbSNP
rs775886088 90 dbSNP
rs1341152481 92 dbSNP
rs760930602 93 dbSNP
rs1278064037 95 dbSNP
rs1352570056 98 dbSNP
rs764381057 100 dbSNP
rs540133110 101 dbSNP
rs1315549977 102 dbSNP
rs1484622620 104 dbSNP
rs1224566419 106 dbSNP
rs1212939917 109 dbSNP
rs761973523 110 dbSNP
rs1329803921 111 dbSNP
rs777231192 111 dbSNP
rs1179217902 112 dbSNP
rs535615038 117 dbSNP
rs766243274 119 dbSNP
rs899788525 120 dbSNP
rs1159572279 121 dbSNP
rs751449745 122 dbSNP
rs907085540 124 dbSNP
rs1353994171 129 dbSNP
rs1432236678 130 dbSNP
rs1174846253 139 dbSNP
rs1402988139 143 dbSNP
rs939960139 145 dbSNP
rs1390964266 147 dbSNP
rs1037064879 148 dbSNP
rs1327066363 152 dbSNP
rs932631161 163 dbSNP
rs754763407 164 dbSNP
rs759350582 165 dbSNP
rs1485070439 171 dbSNP
rs1262902176 174 dbSNP
rs1216694765 175 dbSNP
rs1302332648 176 dbSNP
rs1281689063 177 dbSNP
rs1345486020 177 dbSNP
rs1236386582 178 dbSNP
rs1256585050 179 dbSNP
rs1346280829 183 dbSNP
rs1338140894 185 dbSNP
rs1277426823 187 dbSNP
rs1193620401 188 dbSNP
rs192672973 189 dbSNP
rs1457899160 199 dbSNP
rs1192626856 205 dbSNP
rs995654983 206 dbSNP
rs1289246612 207 dbSNP
rs762156668 207 dbSNP
rs1252703592 208 dbSNP
rs893862841 210 dbSNP
rs1453030324 215 dbSNP
rs577160181 217 dbSNP
rs1224070442 223 dbSNP
rs544160245 235 dbSNP
rs1264549321 236 dbSNP
rs1206082806 242 dbSNP
rs1049494154 261 dbSNP
rs1205827267 263 dbSNP
rs1418828469 267 dbSNP
rs1257506675 270 dbSNP
rs562645679 270 dbSNP
rs1168939882 272 dbSNP
rs1328116991 273 dbSNP
rs1296297879 288 dbSNP
rs1008324504 306 dbSNP
rs1380371989 306 dbSNP
rs1399967161 307 dbSNP
rs1338240916 315 dbSNP
rs1019750490 316 dbSNP
rs1398840664 318 dbSNP
rs906686143 324 dbSNP
rs530108907 325 dbSNP
rs2282227 327 dbSNP
rs1444335235 328 dbSNP
rs1049156887 329 dbSNP
rs895148476 332 dbSNP
rs1241713033 334 dbSNP
rs1356942811 336 dbSNP
rs1044013 345 dbSNP
rs958093918 348 dbSNP
rs1194149954 354 dbSNP
rs1341615183 359 dbSNP
rs1251799324 366 dbSNP
rs1318259507 370 dbSNP
rs916643859 373 dbSNP
rs990884760 373 dbSNP
rs981238043 374 dbSNP
rs991126719 374 dbSNP
rs1026670708 375 dbSNP
rs1044015 377 dbSNP
rs952383537 380 dbSNP
rs1276409910 383 dbSNP
rs1396620111 384 dbSNP
rs1168953104 385 dbSNP
rs982517863 390 dbSNP
rs373050667 391 dbSNP
rs531829839 391 dbSNP
rs928489979 391 dbSNP
rs939928309 391 dbSNP
rs1186899588 403 dbSNP
rs908322866 406 dbSNP
rs1179994444 407 dbSNP
rs1036982871 409 dbSNP
rs1476243552 410 dbSNP
rs1489843718 418 dbSNP
rs1191710900 420 dbSNP
rs28702634 421 dbSNP
rs376368657 422 dbSNP
rs976995095 424 dbSNP
rs1240776383 427 dbSNP
rs1462813110 438 dbSNP
rs1402619436 440 dbSNP
rs921158411 450 dbSNP
rs1425668492 452 dbSNP
rs932582592 456 dbSNP
rs1407750650 457 dbSNP
rs1157005728 461 dbSNP
rs1471283295 464 dbSNP
rs1223157563 465 dbSNP
rs1270928080 465 dbSNP
rs1446168941 465 dbSNP
rs1450574127 465 dbSNP
rs769856118 465 dbSNP
rs549351388 466 dbSNP
rs1414441047 467 dbSNP
rs1314055952 469 dbSNP
rs1350924941 469 dbSNP
rs915223563 470 dbSNP
rs1049401426 471 dbSNP
rs1356761253 471 dbSNP
rs1346900037 472 dbSNP
rs749584384 472 dbSNP
rs1397604892 473 dbSNP
rs1406126075 473 dbSNP
rs1277104103 474 dbSNP
rs1316704328 474 dbSNP
rs372208400 475 dbSNP
rs7525244 475 dbSNP
rs1195052601 476 dbSNP
rs1262098796 476 dbSNP
rs1491538952 476 dbSNP
rs750964314 476 dbSNP
rs7554027 476 dbSNP
rs1229320371 477 dbSNP
rs370017648 477 dbSNP
rs1272906253 478 dbSNP
rs1344174961 479 dbSNP
rs1041608186 480 dbSNP
rs1000173291 481 dbSNP
rs902715457 481 dbSNP
rs1177226464 482 dbSNP
rs571082028 482 dbSNP
rs1012225521 483 dbSNP
rs1023648544 483 dbSNP
rs757295430 484 dbSNP
rs970762216 484 dbSNP
rs928448887 485 dbSNP
rs982230463 485 dbSNP
rs1462390310 486 dbSNP
rs961262127 487 dbSNP
rs973041229 488 dbSNP
rs1305304410 491 dbSNP
rs11422922 492 dbSNP
rs1271439288 492 dbSNP
rs370036539 492 dbSNP
rs201574488 493 dbSNP
rs1477918865 494 dbSNP
rs1471422549 495 dbSNP
rs1177228549 496 dbSNP
rs1340208567 496 dbSNP
rs1377803516 498 dbSNP
rs1417311831 500 dbSNP
rs184600325 502 dbSNP
rs1352860767 503 dbSNP
rs1385195623 508 dbSNP
rs545557036 509 dbSNP
rs866462426 511 dbSNP
rs1384320885 512 dbSNP
rs1161432113 516 dbSNP
rs1446294324 537 dbSNP
rs945407282 541 dbSNP
rs764113220 548 dbSNP
rs1166181215 551 dbSNP
rs1402586878 552 dbSNP
rs1466284824 553 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_ControlA_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aacaggUAACAUAGACC-CCUa 5'
                | || | :||| ||| 
Target 5' -----aAAUG-AGUUGGUGGA- 3'
1 - 15
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_001127320 | 3UTR | GGCUUGGGGAAAUGAGUUGGUGGAUACCUUCUGGGCUUUUGAACUUGCCCCUCCCCCAUUUCCCUCUCCCCCAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_001127320 | 3UTR | GGCUUGGGGAAAUGAGUUGGUGGAUACCUUCUGGGCUUUUGAACUUGCCCCUCCCCCAUUUCCCUCUCCCCCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset Chi_ControlA_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control A
Location of target site ENST00000343815.6 | 3UTR | AAAUGAGUUGGUGGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
BRCA -0.279 0.01 -0.259 0.01 84 Click to see details
HNSC -0.315 0.02 -0.226 0.08 42 Click to see details
UCEC -0.297 0.11 -0.177 0.23 19 Click to see details
BLCA -0.266 0.14 -0.315 0.1 18 Click to see details
THCA -0.137 0.15 -0.126 0.17 59 Click to see details
LIHC 0.11 0.23 0.055 0.35 49 Click to see details
PCPG 0.721 0.24 0.500 0.33 3 Click to see details
CESC -0.6 0.3 -0.500 0.33 3 Click to see details
CHOL 0.206 0.3 0.000 0.5 9 Click to see details
KIRP 0.097 0.3 0.193 0.14 32 Click to see details
KICH 0.108 0.3 0.092 0.33 25 Click to see details
STAD -0.078 0.34 -0.006 0.49 32 Click to see details
LUAD 0.13 0.34 0.182 0.29 12 Click to see details
PAAD 0.305 0.35 0.400 0.3 4 Click to see details
ESCA -0.086 0.4 -0.118 0.36 11 Click to see details
PRAD 0.029 0.42 -0.114 0.22 50 Click to see details
KIRC 0.013 0.46 -0.020 0.44 68 Click to see details
LUSC -0.016 0.46 0.110 0.26 38 Click to see details
LUSC -0.016 0.46 0.110 0.26 38 Click to see details
164 hsa-miR-2355-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT190653 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT286477 TAOK1 TAO kinase 1 2 4
MIRT318993 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT345622 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT442513 SYT7 synaptotagmin 7 2 4
MIRT444247 CTNND1 catenin delta 1 2 2
MIRT444780 ECE1 endothelin converting enzyme 1 2 2
MIRT456525 TMEM63A transmembrane protein 63A 2 2
MIRT468960 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469834 R3HDM4 R3H domain containing 4 2 2
MIRT470027 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT471167 PHB2 prohibitin 2 2 2
MIRT475819 HDGF heparin binding growth factor 2 4
MIRT479389 CDKN1B cyclin dependent kinase inhibitor 1B 2 6
MIRT481747 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT485220 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT487259 CCNF cyclin F 2 2
MIRT489971 MCC mutated in colorectal cancers 2 4
MIRT491399 C1D C1D nuclear receptor corepressor 2 2
MIRT494959 CCDC144A coiled-coil domain containing 144A 2 4
MIRT494979 PPP5D1 PPP5 tetratricopeptide repeat domain containing 1 2 2
MIRT495225 CHST14 carbohydrate sulfotransferase 14 2 2
MIRT496550 TBX15 T-box 15 2 2
MIRT501612 PISD phosphatidylserine decarboxylase 2 2
MIRT509393 TRIM24 tripartite motif containing 24 2 2
MIRT519616 ZNF788 zinc finger family member 788 2 4
MIRT519738 ZNF394 zinc finger protein 394 2 4
MIRT521230 SAR1A secretion associated Ras related GTPase 1A 2 4
MIRT521801 POM121C POM121 transmembrane nucleoporin C 2 2
MIRT526233 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT526932 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT529189 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT529329 ZNF649 zinc finger protein 649 2 2
MIRT529698 MRPL30 mitochondrial ribosomal protein L30 2 2
MIRT529921 TOP1MT DNA topoisomerase I mitochondrial 2 2
MIRT530032 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT530898 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT531621 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT533132 XIAP X-linked inhibitor of apoptosis 2 2
MIRT533210 WAPAL WAPL cohesin release factor 2 2
MIRT534058 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT535487 PARVB parvin beta 2 2
MIRT536749 HOXD9 homeobox D9 2 2
MIRT551456 CARKD NAD(P)HX dehydratase 2 2
MIRT551858 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT552095 FAM8A1 family with sequence similarity 8 member A1 2 2
MIRT552332 ZNF704 zinc finger protein 704 2 2
MIRT552549 ZFP36L2 ZFP36 ring finger protein like 2 2 2
MIRT561505 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT562702 ZNF415 zinc finger protein 415 2 2
MIRT563052 ZNF138 zinc finger protein 138 2 2
MIRT564592 ZNF791 zinc finger protein 791 2 2
MIRT566422 PIGA phosphatidylinositol glycan anchor biosynthesis class A 2 2
MIRT570176 RCBTB1 RCC1 and BTB domain containing protein 1 2 2
MIRT570866 ZNF525 zinc finger protein 525 2 2
MIRT570875 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571517 ZNF625 zinc finger protein 625 2 2
MIRT572551 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT610894 HINFP histone H4 transcription factor 2 2
MIRT611037 PTGES prostaglandin E synthase 2 2
MIRT611479 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT612419 SP1 Sp1 transcription factor 2 2
MIRT614478 FRMPD3 FERM and PDZ domain containing 3 2 2
MIRT616318 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT616929 ZNF638 zinc finger protein 638 2 2
MIRT618131 GABARAPL3 GABA type A receptor associated protein like 3 pseudogene 2 2
MIRT618452 ZFP30 ZFP30 zinc finger protein 2 4
MIRT620671 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT620713 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT621126 EMC7 ER membrane protein complex subunit 7 2 4
MIRT621443 TOMM22 translocase of outer mitochondrial membrane 22 2 2
MIRT623491 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT623783 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT623918 FNBP1L formin binding protein 1 like 2 2
MIRT625723 CXorf38 chromosome X open reading frame 38 2 2
MIRT625778 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT626940 TTR transthyretin 2 2
MIRT627357 TSC22D2 TSC22 domain family member 2 2 2
MIRT632078 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT633361 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT639793 MVK mevalonate kinase 2 2
MIRT643761 NAGK N-acetylglucosamine kinase 2 2
MIRT644358 NDUFAF6 NADH:ubiquinone oxidoreductase complex assembly factor 6 2 2
MIRT645558 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT646588 ANKRD36 ankyrin repeat domain 36 2 2
MIRT646631 SLC25A46 solute carrier family 25 member 46 2 2
MIRT648066 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT648142 SUCLG2 succinate-CoA ligase GDP-forming beta subunit 2 2
MIRT648416 MYOZ3 myozenin 3 2 2
MIRT649218 AMMECR1L AMMECR1 like 2 2
MIRT649772 MRPS27 mitochondrial ribosomal protein S27 2 4
MIRT650510 UFM1 ubiquitin fold modifier 1 2 2
MIRT651007 ZNF740 zinc finger protein 740 2 2
MIRT651524 WNT2B Wnt family member 2B 2 2
MIRT652014 TTYH3 tweety family member 3 2 2
MIRT652513 TMEM109 transmembrane protein 109 2 2
MIRT652686 THUMPD3 THUMP domain containing 3 2 2
MIRT652772 TENM3 teneurin transmembrane protein 3 2 2
MIRT653160 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT653765 SIX5 SIX homeobox 5 2 2
MIRT653792 SIRPA signal regulatory protein alpha 2 2
MIRT655649 OAZ2 ornithine decarboxylase antizyme 2 2 2
MIRT656263 MEX3A mex-3 RNA binding family member A 2 2
MIRT657044 KCNH6 potassium voltage-gated channel subfamily H member 6 2 2
MIRT657375 HMGA1 high mobility group AT-hook 1 2 2
MIRT657532 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT657542 GSTO2 glutathione S-transferase omega 2 2 2
MIRT657828 GJD3 gap junction protein delta 3 2 2
MIRT658946 DOK6 docking protein 6 2 2
MIRT660363 BACH2 BTB domain and CNC homolog 2 2 2
MIRT660406 ATXN7L3 ataxin 7 like 3 2 2
MIRT660948 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT661031 AAK1 AP2 associated kinase 1 2 2
MIRT662435 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT668419 FAM217B family with sequence similarity 217 member B 2 2
MIRT669332 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT676105 CLUAP1 clusterin associated protein 1 2 2
MIRT677084 SMIM15 small integral membrane protein 15 2 2
MIRT677127 OGFOD3 2-oxoglutarate and iron dependent oxygenase domain containing 3 2 2
MIRT678001 CPM carboxypeptidase M 2 2
MIRT678531 TMEM78 transmembrane protein 78 2 2
MIRT680000 ZNF860 zinc finger protein 860 2 2
MIRT680098 PXMP4 peroxisomal membrane protein 4 2 2
MIRT686795 SOX12 SRY-box 12 2 2
MIRT698887 SPTBN2 spectrin beta, non-erythrocytic 2 2 2
MIRT699371 SLC30A6 solute carrier family 30 member 6 2 2
MIRT702005 MIDN midnolin 2 2
MIRT708101 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT709563 GYG2 glycogenin 2 2 2
MIRT710559 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT710585 CDCA4 cell division cycle associated 4 2 2
MIRT710873 NT5DC1 5'-nucleotidase domain containing 1 2 2
MIRT711876 VASP vasodilator stimulated phosphoprotein 2 2
MIRT712226 RIMS3 regulating synaptic membrane exocytosis 3 2 2
MIRT713211 FAM13A family with sequence similarity 13 member A 2 2
MIRT713261 GPR55 G protein-coupled receptor 55 2 2
MIRT713327 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT713889 RNF19B ring finger protein 19B 2 2
MIRT714015 UBAP2L ubiquitin associated protein 2 like 2 2
MIRT714202 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT714717 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714748 ZNF385D zinc finger protein 385D 2 2
MIRT714806 ARHGEF19 Rho guanine nucleotide exchange factor 19 2 2
MIRT714852 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715717 MRPL4 mitochondrial ribosomal protein L4 2 2
MIRT715852 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT716853 MFSD12 major facilitator superfamily domain containing 12 2 2
MIRT717134 EBPL emopamil binding protein like 2 2
MIRT717248 TMEM246 transmembrane protein 246 2 2
MIRT717997 ZNF79 zinc finger protein 79 2 2
MIRT718341 PURA purine rich element binding protein A 2 2
MIRT719587 TFCP2L1 transcription factor CP2 like 1 2 2
MIRT720520 PTGR2 prostaglandin reductase 2 2 2
MIRT720671 SLC39A13 solute carrier family 39 member 13 2 2
MIRT721213 DCLK3 doublecortin like kinase 3 2 2
MIRT721757 INF2 inverted formin, FH2 and WH2 domain containing 2 2
MIRT721826 POU6F1 POU class 6 homeobox 1 2 2
MIRT722091 SUSD1 sushi domain containing 1 2 2
MIRT722275 LURAP1 leucine rich adaptor protein 1 2 2
MIRT722802 ARHGAP19 Rho GTPase activating protein 19 2 2
MIRT722866 FAM212B family with sequence similarity 212 member B 2 2
MIRT723113 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT724378 NEK8 NIMA related kinase 8 2 2
MIRT732775 PYCR1 pyrroline-5-carboxylate reductase 1 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2355 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Temozolomide 5394 NSC362856 approved resistant High Glioma tissue
hsa-miR-2355-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-2355-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-2355-5p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2355-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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