pre-miRNA Information
pre-miRNA hsa-mir-4446   
Genomic Coordinates chr3: 113594876 - 113594942
Description Homo sapiens miR-4446 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4446-5p
Sequence 8| AUUUCCCUGCCAUUCCCUUGGC |29
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1356015605 6 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF462   
Synonyms Zfp462
Description zinc finger protein 462
Transcript NM_021224   
Expression
Putative miRNA Targets on ZNF462
3'UTR of ZNF462
(miRNA target sites are highlighted)
>ZNF462|NM_021224|3'UTR
   1 GCGTTTGGTGAAATTCTTAATCAAACCTTACTTGAACAGTGATGAAAAAGTGGGAGGGCTGGCTTGGGCTGAGAAGGGAG
  81 GGACAGAAAAGAGAAGACAGAACAAAGCTGCTTTTTAGGACTGAACAATCTATTTTCAAAGCACTGGTACCTGTGTGAGT
 161 GAGTATGTAAATTAAAGTTATTTAAATGGTTGGAATATGTGGCTCCTTTTCCATCACTACATCTTTTCTTCCGGATCTTC
 241 ATCATGGAAGTTTCATTTGTTGCGGAATATGGAAGCACCTCCCAATGGTACGGTGCACCCTGTGGTGGTCTTGGACAGTA
 321 TGTGGAAACAGAAGCTCCATGACGGTAGAAGACTTCTCATTGGGGAGCAACTTTTTGACGCACAACTTTTGGTGCGTTTT
 401 TCTAGTTTTAATACCTTAAGCTTTTTCAAGACCTAACTGCAGCCGCTTTGGGAAAAAAAAACAAAAAACAAAAAACAGAA
 481 AACAAAAAAAAAAAAACTGCTTTGCATAAAACAGTCACCTGTTTCCTAGTACCTCAAACTTAACCAAGGGAACTCTCTGC
 561 ATTTGTCAGTACTACCTGTCGTCGTTGTGGTTAAATGTAGAGAGAACTGCTGGGCAAGATGGTGAATGGAGAAAAAAAAA
 641 GAGTTTTAAAGAAAGGAACACAAATTGTGCTTAAAATCCCCATGTGGGTTTTATTTCTTAAAATACTGTGATTTTTTTAA
 721 TTATTTTAGTAAAAAACAAAACAAAAAAAAGAAACAGACTTTAATTATTAGATAACTGTTTGTGAATTGTCATCCTTTAT
 801 TCCAGGTAAGCTGTTTATTAGTGTTCAACTATAATTTAGAATTTGGTAGATTCATGTGAGCTAATTTTAAGGTGATTGTG
 881 GAGTTTTGTTTGCCACATGTTTATTTTCTATCAATTTGAGTGTTACAAACACAGCACAATTCAGTTTTTCATATGAATTG
 961 TTTTTCGTGTGTGTGTTGTTATTGTTGTTTTAATTTCGGGGCAAGGGAGATTTAGTTTTTTGTGAATAGGAATGTTTTTA
1041 TTTTAAACATGGAAATAACAAAGAAGTTAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTAATTTAACTAAAGAACCAAAC
1121 TTTCGGCACAGCTATGCAGCTTGTGGGCCAGACGAGGAGGTCCTCCTCACCCTTTTGTTGCCTGTCAAATTCACGCATTA
1201 TCCGTCTCATAAATAATTTCTGTTAGGATTGGCTGGCTTTTGTGTGTGATTTTAAAATCTGTGTTTTGTTTCTGCTGGCA
1281 TTGTGTTTTGTTGGGGGTTTTCATTTATTTAGGGGACGAGGGGATGTACTAGAATCCCATCCCTTTCGTGAGAGTGGACA
1361 AGAAATAACATATCCTACAAGGAGCCTGGAGAACTACTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTAAATCT
1441 AGCTGCCAGCTGCTCTGTCCCCCATATCAGCTTTTTCAGGAGGGAGCAGCTTAGACTAAATCTAAGCCTACATTTATAAT
1521 ATGTTCTGATTGTGAACAAAGGGTTTCGTTCCAAAAAATAGAAAAGAACTTTTCTTGAAGCCTAGGTTTTAGAAGCCCGT
1601 GTGTGTGTGTGCTTGGATGTGTGTGTGCGTGTATGAGTGTGTGTGTGCATGTGTGCACGTGTGAATCCTTTGGTTTTCAT
1681 GTTTTTTTTTTTTTTTTTTTACTTGGAAGGGTTGTGGGAGGGTGGGAGGGAAGAAAGGGAAGGGGAATTGCTGAGATGAC
1761 AGTGTCCCACACAGCTTCAAATAAAATCCATGGAAAGATGTTGCATTTGTGGAATAAGTGCTTACTTGAAAAGCATGTTC
1841 TTCTTTTATTTTCTTACTGTTAAGAATTTTTATTTGTAGGATGTTTGTTTTAATTTAATTTTTTTAAGGGATGGGGGCCA
1921 TCATGTGGAAACCAGAAAATGGGGAAAGTGTGAACTATCCAGACAAAGATTCATTTTGTGTCTATATTTGTTTTTAATTG
2001 GCCTCATTTCAAATGTATTAAACAGTTCCATACCTGGATTGGGTGTTTGTAATGGTTACCAAAAAACAAACAAAAAAAGA
2081 AAGAAAAAGGAAAAAAAAAAAGAAAATAATTGTGACATGCTTTTATCACTACTTTATTTTTCAAATAACATGTAAATATT
2161 GTAATCCATTGGATTTTGTTTTGCTAACCTGTTAATAAAAATATGGGACCATTATCCTTTTAACAAGGCTAGAATGTCAT
2241 TTTTTTCTTTTTCAAACATATACCTGATATTTTGTGGCCGCACATTTTGGATGCATTATTATAATTCTGTTGACTGTAAT
2321 GACATAGAATTTACAACATTTTTTGTTGTTGTTTAATTTATACAGAGGACATTTTTTTCAGAGCTTGAGAGAAGAAAATA
2401 AATAGCAAAATGATAACCTATTGACTCCAGTAATCAGTGTTTCCCAATACTTCATAAGAGATAGGGAGACCCTGAGTCCT
2481 TGAAGCCAAGGGTTTAAAAACAAAACAAAAACAAAAAAAACCACAAGTAGGTTATTCAAGTTGTTTGCAACATACATTTT
2561 GTAATGAAATGTGAGAAATTAATAAAGAATTTTTTTCACATGTGAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cgGUUCCCUUACCGUCCCUUUa 5'
            :::| |::||| ||||||: 
Target 5' tgTGGGAGGGTGGGAGGGAAGa 3'
1713 - 1734 148.00 -22.10
2
miRNA  3' cgGUUCCCUUACCGUCCCUUUa 5'
            :||| ||    :|||||:| 
Target 5' caTAAGAGA----TAGGGAGAc 3'
2453 - 2470 134.00 -10.80
3
miRNA  3' cgGUUCCCUUACCGUCCCUUUa 5'
            | ||  |||   :|||||| 
Target 5' aaCCAGAAAAT---GGGGAAAg 3'
1930 - 1948 133.00 -11.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN20076879 16 COSMIC
COSN31574619 17 COSMIC
COSN18733908 37 COSMIC
COSN32053868 70 COSMIC
COSN30601060 117 COSMIC
COSN30109470 158 COSMIC
COSN31545092 165 COSMIC
COSN14940983 229 COSMIC
COSN23769373 264 COSMIC
COSN8330442 286 COSMIC
COSN28250402 475 COSMIC
COSN18856911 484 COSMIC
COSN26375102 507 COSMIC
COSN14785972 631 COSMIC
COSN9694192 657 COSMIC
COSN29696341 737 COSMIC
COSN30328457 754 COSMIC
COSN15051093 824 COSMIC
COSN22772372 1209 COSMIC
COSN21926527 1243 COSMIC
COSN31778765 1319 COSMIC
COSN28201164 1322 COSMIC
COSN16308255 1349 COSMIC
COSN29120524 1682 COSMIC
COSN18723384 1690 COSMIC
COSN23437621 1720 COSMIC
COSN25173536 1724 COSMIC
COSN4943569 1958 COSMIC
COSN23436396 2061 COSMIC
COSN2304433 2335 COSMIC
COSN16720241 2599 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1327811555 2 dbSNP
rs148273848 3 dbSNP
rs374070328 4 dbSNP
rs1181231678 13 dbSNP
rs1053483089 14 dbSNP
rs769001700 17 dbSNP
rs563590189 20 dbSNP
rs530862808 22 dbSNP
rs769285169 37 dbSNP
rs772950663 39 dbSNP
rs370093942 40 dbSNP
rs1483529492 51 dbSNP
rs1265671117 55 dbSNP
rs1036188650 59 dbSNP
rs567490290 75 dbSNP
rs1312527555 96 dbSNP
rs184630642 112 dbSNP
rs901706243 114 dbSNP
rs1410795368 120 dbSNP
rs1429882241 131 dbSNP
rs1303055562 133 dbSNP
rs764466622 137 dbSNP
rs577423408 144 dbSNP
rs1021077416 145 dbSNP
rs1361463137 148 dbSNP
rs141237881 164 dbSNP
rs890369291 166 dbSNP
rs1009257083 168 dbSNP
rs1368092068 169 dbSNP
rs1011247323 182 dbSNP
rs1163994339 190 dbSNP
rs1472790844 204 dbSNP
rs370708140 214 dbSNP
rs1298088193 219 dbSNP
rs1342931010 229 dbSNP
rs1245365911 233 dbSNP
rs544794199 234 dbSNP
rs1021292617 242 dbSNP
rs967100111 246 dbSNP
rs373821139 254 dbSNP
rs1487326288 256 dbSNP
rs1264489388 260 dbSNP
rs1489840493 260 dbSNP
rs998598195 262 dbSNP
rs563289572 264 dbSNP
rs532725752 265 dbSNP
rs1331776437 270 dbSNP
rs111942243 275 dbSNP
rs1485458502 280 dbSNP
rs117502080 286 dbSNP
rs950313365 288 dbSNP
rs1390368495 289 dbSNP
rs150783033 292 dbSNP
rs927457547 293 dbSNP
rs936183043 294 dbSNP
rs750830363 298 dbSNP
rs1156888973 300 dbSNP
rs1162414694 301 dbSNP
rs916179564 306 dbSNP
rs1383861978 308 dbSNP
rs1469611319 315 dbSNP
rs952789528 318 dbSNP
rs1430936975 319 dbSNP
rs1266250670 321 dbSNP
rs914988149 330 dbSNP
rs1466552982 336 dbSNP
rs1266570612 340 dbSNP
rs984134376 344 dbSNP
rs75931950 345 dbSNP
rs1277113774 348 dbSNP
rs1042040948 361 dbSNP
rs1166185072 366 dbSNP
rs890140031 372 dbSNP
rs1344971265 375 dbSNP
rs908578301 376 dbSNP
rs940073492 380 dbSNP
rs1041171487 381 dbSNP
rs923073812 382 dbSNP
rs1464110021 383 dbSNP
rs143142851 384 dbSNP
rs1366237808 385 dbSNP
rs1188826528 390 dbSNP
rs1245784256 396 dbSNP
rs900303142 397 dbSNP
rs1443335621 416 dbSNP
rs113842492 433 dbSNP
rs1027524083 438 dbSNP
rs1050734437 439 dbSNP
rs571247965 445 dbSNP
rs543484051 446 dbSNP
rs1024287990 450 dbSNP
rs1297127284 453 dbSNP
rs971819541 453 dbSNP
rs577307052 454 dbSNP
rs1394165611 455 dbSNP
rs1316097736 456 dbSNP
rs1374747188 456 dbSNP
rs1316041459 459 dbSNP
rs1213412603 463 dbSNP
rs1431100535 463 dbSNP
rs759650366 463 dbSNP
rs562127331 464 dbSNP
rs1166896353 465 dbSNP
rs1473331061 465 dbSNP
rs377362207 469 dbSNP
rs1185842222 470 dbSNP
rs1253165522 470 dbSNP
rs1485656033 470 dbSNP
rs1207459760 472 dbSNP
rs371023490 476 dbSNP
rs1269584978 477 dbSNP
rs957655426 477 dbSNP
rs1320868236 479 dbSNP
rs990268313 479 dbSNP
rs1465071629 483 dbSNP
rs11284528 484 dbSNP
rs1327801801 484 dbSNP
rs1368085429 484 dbSNP
rs567652173 484 dbSNP
rs796461921 484 dbSNP
rs1042698283 485 dbSNP
rs1161902022 486 dbSNP
rs913430243 487 dbSNP
rs139833073 488 dbSNP
rs562771978 489 dbSNP
rs1035421963 494 dbSNP
rs77260014 497 dbSNP
rs76703695 498 dbSNP
rs77737609 499 dbSNP
rs752908866 501 dbSNP
rs895944469 507 dbSNP
rs1222367453 509 dbSNP
rs530798392 513 dbSNP
rs547923619 517 dbSNP
rs1287986317 536 dbSNP
rs879545991 538 dbSNP
rs952983870 546 dbSNP
rs1288910587 550 dbSNP
rs1230107677 553 dbSNP
rs753741786 561 dbSNP
rs900412756 575 dbSNP
rs549311851 581 dbSNP
rs1048909054 582 dbSNP
rs886293877 585 dbSNP
rs1004941777 587 dbSNP
rs1252889315 588 dbSNP
rs1448907451 607 dbSNP
rs1024820057 608 dbSNP
rs1471925975 617 dbSNP
rs1284661805 620 dbSNP
rs1372565323 624 dbSNP
rs984400845 627 dbSNP
rs1015584643 628 dbSNP
rs961385336 630 dbSNP
rs1213221817 631 dbSNP
rs190730244 631 dbSNP
rs1001936363 632 dbSNP
rs1210330559 632 dbSNP
rs922688061 633 dbSNP
rs528297050 635 dbSNP
rs1221790451 638 dbSNP
rs764729598 639 dbSNP
rs1283463864 640 dbSNP
rs1219322220 643 dbSNP
rs1269800000 644 dbSNP
rs1329685189 662 dbSNP
rs1034345374 683 dbSNP
rs1439645976 685 dbSNP
rs933108824 685 dbSNP
rs752263623 687 dbSNP
rs1455969921 689 dbSNP
rs957603576 689 dbSNP
rs990383498 709 dbSNP
rs780597360 712 dbSNP
rs546524299 719 dbSNP
rs1235816923 733 dbSNP
rs1443621916 734 dbSNP
rs1210243225 738 dbSNP
rs967962111 742 dbSNP
rs531590127 743 dbSNP
rs911633383 743 dbSNP
rs977834637 743 dbSNP
rs1260083819 754 dbSNP
rs1232739241 765 dbSNP
rs947313629 766 dbSNP
rs1313464480 777 dbSNP
rs10122255 779 dbSNP
rs1232890057 790 dbSNP
rs921621878 796 dbSNP
rs1299342785 804 dbSNP
rs930524902 808 dbSNP
rs1049021429 818 dbSNP
rs1303959781 828 dbSNP
rs538386643 836 dbSNP
rs902832908 854 dbSNP
rs145366150 862 dbSNP
rs1357903394 864 dbSNP
rs1173168979 865 dbSNP
rs1056774385 883 dbSNP
rs940524207 884 dbSNP
rs895570307 893 dbSNP
rs145380447 895 dbSNP
rs1260718979 897 dbSNP
rs1182212560 909 dbSNP
rs1001653765 911 dbSNP
rs1174517914 913 dbSNP
rs1034293213 921 dbSNP
rs1209598324 925 dbSNP
rs1023119803 926 dbSNP
rs888636265 927 dbSNP
rs1404651307 929 dbSNP
rs893158003 941 dbSNP
rs79035799 943 dbSNP
rs1307306574 961 dbSNP
rs73668724 967 dbSNP
rs747350524 968 dbSNP
rs777443421 970 dbSNP
rs987367173 974 dbSNP
rs1019808482 975 dbSNP
rs755374823 978 dbSNP
rs966166985 979 dbSNP
rs974507914 982 dbSNP
rs1296694392 983 dbSNP
rs1290215167 995 dbSNP
rs573251390 998 dbSNP
rs370920003 999 dbSNP
rs1425319341 1004 dbSNP
rs984665041 1010 dbSNP
rs116892507 1028 dbSNP
rs1346686292 1030 dbSNP
rs1483114995 1033 dbSNP
rs1253284834 1035 dbSNP
rs1219242125 1036 dbSNP
rs1265653105 1041 dbSNP
rs1480128506 1041 dbSNP
rs1271660525 1057 dbSNP
rs1224257992 1059 dbSNP
rs1183791096 1060 dbSNP
rs1333062911 1060 dbSNP
rs890134756 1064 dbSNP
rs985979625 1069 dbSNP
rs1229503804 1071 dbSNP
rs1352849459 1072 dbSNP
rs1435637787 1072 dbSNP
rs1390890673 1073 dbSNP
rs1391796492 1074 dbSNP
rs878873102 1075 dbSNP
rs1005515270 1076 dbSNP
rs1179129816 1076 dbSNP
rs1192530334 1076 dbSNP
rs1209721521 1076 dbSNP
rs1238435359 1076 dbSNP
rs1267618257 1076 dbSNP
rs1273007442 1076 dbSNP
rs1295444998 1076 dbSNP
rs1331932318 1076 dbSNP
rs1417944937 1076 dbSNP
rs1467433846 1076 dbSNP
rs397893745 1076 dbSNP
rs547644753 1076 dbSNP
rs62568606 1077 dbSNP
rs1207879293 1079 dbSNP
rs1303712508 1080 dbSNP
rs940654430 1082 dbSNP
rs1490274168 1083 dbSNP
rs1045964266 1084 dbSNP
rs1197757146 1087 dbSNP
rs1457567129 1090 dbSNP
rs1379523980 1091 dbSNP
rs1387067112 1092 dbSNP
rs1478487716 1093 dbSNP
rs910370302 1095 dbSNP
rs1167618023 1099 dbSNP
rs947241158 1100 dbSNP
rs1417462831 1101 dbSNP
rs1194940029 1104 dbSNP
rs1431752885 1105 dbSNP
rs1309755695 1106 dbSNP
rs1371115208 1107 dbSNP
rs1163036266 1108 dbSNP
rs907059949 1108 dbSNP
rs577246686 1110 dbSNP
rs1189680954 1111 dbSNP
rs1015149800 1113 dbSNP
rs1260262761 1116 dbSNP
rs1332666883 1124 dbSNP
rs1233510806 1125 dbSNP
rs544402079 1126 dbSNP
rs1298588470 1133 dbSNP
rs1327940891 1135 dbSNP
rs1316160998 1139 dbSNP
rs1269270160 1146 dbSNP
rs1339419047 1147 dbSNP
rs1175050495 1148 dbSNP
rs1432315521 1151 dbSNP
rs937404105 1154 dbSNP
rs1476609600 1155 dbSNP
rs1055821159 1156 dbSNP
rs556484795 1157 dbSNP
rs1443539609 1159 dbSNP
rs893105555 1164 dbSNP
rs1208890977 1166 dbSNP
rs1485348552 1172 dbSNP
rs1275661874 1184 dbSNP
rs1011535935 1195 dbSNP
rs757587348 1196 dbSNP
rs903419843 1197 dbSNP
rs1220647733 1204 dbSNP
rs781565183 1205 dbSNP
rs1452620188 1207 dbSNP
rs1412386623 1209 dbSNP
rs934290207 1215 dbSNP
rs574894045 1225 dbSNP
rs1056716978 1226 dbSNP
rs1411347783 1231 dbSNP
rs1393831921 1238 dbSNP
rs1167766004 1246 dbSNP
rs1240632699 1250 dbSNP
rs916929402 1259 dbSNP
rs1473321861 1260 dbSNP
rs1451357819 1274 dbSNP
rs948479445 1280 dbSNP
rs1474935167 1286 dbSNP
rs1044555901 1291 dbSNP
rs888590661 1292 dbSNP
rs542896427 1294 dbSNP
rs1206679484 1318 dbSNP
rs1037245056 1319 dbSNP
rs1020177173 1323 dbSNP
rs1356706807 1324 dbSNP
rs1295084016 1326 dbSNP
rs561162967 1327 dbSNP
rs897407642 1334 dbSNP
rs1354711703 1335 dbSNP
rs1288468931 1342 dbSNP
rs528432926 1348 dbSNP
rs7854951 1349 dbSNP
rs974454084 1353 dbSNP
rs1028747789 1354 dbSNP
rs1397081666 1362 dbSNP
rs951813356 1374 dbSNP
rs984446106 1375 dbSNP
rs1413340831 1378 dbSNP
rs1029652021 1379 dbSNP
rs1179088218 1383 dbSNP
rs1468617207 1384 dbSNP
rs769700683 1387 dbSNP
rs564957659 1392 dbSNP
rs1362621053 1393 dbSNP
rs1199800046 1397 dbSNP
rs1436565967 1397 dbSNP
rs1468767203 1402 dbSNP
rs907565277 1402 dbSNP
rs532204183 1403 dbSNP
rs1284853222 1406 dbSNP
rs963496087 1406 dbSNP
rs1224977922 1407 dbSNP
rs1370453714 1407 dbSNP
rs368917224 1409 dbSNP
rs1170679535 1410 dbSNP
rs1173209913 1410 dbSNP
rs1191577899 1410 dbSNP
rs1217801420 1410 dbSNP
rs1234380997 1410 dbSNP
rs1251367173 1410 dbSNP
rs1278615659 1410 dbSNP
rs1282993464 1410 dbSNP
rs1315034796 1410 dbSNP
rs1407282606 1410 dbSNP
rs1455774842 1410 dbSNP
rs1467820180 1410 dbSNP
rs77076411 1410 dbSNP
rs962253808 1410 dbSNP
rs1300738071 1412 dbSNP
rs1349677373 1412 dbSNP
rs1381480702 1413 dbSNP
rs954211131 1414 dbSNP
rs1267801564 1415 dbSNP
rs1006955081 1417 dbSNP
rs1357474294 1417 dbSNP
rs1345077967 1425 dbSNP
rs1398162596 1435 dbSNP
rs1436645841 1435 dbSNP
rs1204942995 1436 dbSNP
rs1266433907 1437 dbSNP
rs62568607 1438 dbSNP
rs1466431400 1440 dbSNP
rs1420026825 1441 dbSNP
rs1189515353 1442 dbSNP
rs1188015839 1451 dbSNP
rs550414586 1454 dbSNP
rs1211000866 1457 dbSNP
rs981402708 1461 dbSNP
rs1233051809 1465 dbSNP
rs1307692296 1468 dbSNP
rs1442894975 1476 dbSNP
rs55979495 1477 dbSNP
rs1361935331 1478 dbSNP
rs148799791 1481 dbSNP
rs968489233 1489 dbSNP
rs1252756141 1490 dbSNP
rs12004569 1495 dbSNP
rs937184635 1497 dbSNP
rs1312329867 1499 dbSNP
rs10978702 1503 dbSNP
rs978568943 1511 dbSNP
rs1430690961 1516 dbSNP
rs1055767047 1517 dbSNP
rs1172343166 1519 dbSNP
rs867333576 1520 dbSNP
rs375979424 1523 dbSNP
rs34636245 1534 dbSNP
rs1157785834 1535 dbSNP
rs993176477 1538 dbSNP
rs1458477366 1547 dbSNP
rs916898990 1548 dbSNP
rs142398578 1549 dbSNP
rs201220150 1553 dbSNP
rs1393846442 1556 dbSNP
rs1044115351 1560 dbSNP
rs1827317 1567 dbSNP
rs35468172 1570 dbSNP
rs909623751 1572 dbSNP
rs1042091971 1576 dbSNP
rs1307210055 1577 dbSNP
rs1315384043 1583 dbSNP
rs180708718 1586 dbSNP
rs1827318 1593 dbSNP
rs186087643 1594 dbSNP
rs1238706187 1597 dbSNP
rs1296602670 1599 dbSNP
rs1375818514 1599 dbSNP
rs1392026399 1599 dbSNP
rs1286832242 1600 dbSNP
rs1331736735 1602 dbSNP
rs1399219522 1602 dbSNP
rs1037195986 1614 dbSNP
rs1462981324 1616 dbSNP
rs1415569804 1619 dbSNP
rs534253952 1629 dbSNP
rs903201422 1630 dbSNP
rs897358728 1632 dbSNP
rs1008866151 1637 dbSNP
rs1041306652 1637 dbSNP
rs368336435 1639 dbSNP
rs899958414 1650 dbSNP
rs1333414177 1652 dbSNP
rs370211848 1658 dbSNP
rs1202278929 1659 dbSNP
rs998422202 1660 dbSNP
rs1318771771 1662 dbSNP
rs1424344270 1666 dbSNP
rs1181441161 1668 dbSNP
rs367741427 1678 dbSNP
rs1326404048 1680 dbSNP
rs1371956747 1680 dbSNP
rs1409481695 1681 dbSNP
rs1442809981 1681 dbSNP
rs1034389483 1682 dbSNP
rs1162512647 1682 dbSNP
rs1206188868 1682 dbSNP
rs1259085498 1682 dbSNP
rs1353448850 1682 dbSNP
rs1394514122 1682 dbSNP
rs558695849 1682 dbSNP
rs57114077 1682 dbSNP
rs1238412328 1683 dbSNP
rs1473473865 1684 dbSNP
rs1159420126 1685 dbSNP
rs1305823642 1685 dbSNP
rs1404934623 1686 dbSNP
rs1322836228 1687 dbSNP
rs1368464315 1687 dbSNP
rs1382758345 1688 dbSNP
rs1464072213 1688 dbSNP
rs1286672910 1689 dbSNP
rs200292306 1689 dbSNP
rs113325994 1690 dbSNP
rs1402364080 1691 dbSNP
rs1391314130 1699 dbSNP
rs1491276621 1700 dbSNP
rs1326870380 1701 dbSNP
rs1449295616 1701 dbSNP
rs1452993945 1701 dbSNP
rs397976376 1701 dbSNP
rs1352687505 1702 dbSNP
rs1217935069 1703 dbSNP
rs1485999937 1705 dbSNP
rs1229419186 1706 dbSNP
rs1208936019 1707 dbSNP
rs1256128580 1708 dbSNP
rs1274068069 1709 dbSNP
rs1282837912 1710 dbSNP
rs1310668372 1712 dbSNP
rs1325048999 1714 dbSNP
rs1235437131 1715 dbSNP
rs1256652383 1716 dbSNP
rs959085227 1720 dbSNP
rs1204313025 1723 dbSNP
rs992931659 1724 dbSNP
rs917206897 1728 dbSNP
rs3179383 1734 dbSNP
rs3179382 1743 dbSNP
rs1475588846 1746 dbSNP
rs7855425 1756 dbSNP
rs1259757833 1757 dbSNP
rs371867943 1767 dbSNP
rs997012823 1771 dbSNP
rs951765776 1779 dbSNP
rs1051804726 1788 dbSNP
rs1341165123 1797 dbSNP
rs570974344 1798 dbSNP
rs1007310752 1800 dbSNP
rs74678965 1801 dbSNP
rs1022340864 1804 dbSNP
rs1412366361 1811 dbSNP
rs961752039 1821 dbSNP
rs3179381 1823 dbSNP
rs1329031729 1824 dbSNP
rs1461084872 1832 dbSNP
rs1394721598 1835 dbSNP
rs968102347 1836 dbSNP
rs1170381061 1838 dbSNP
rs999593417 1845 dbSNP
rs1031446281 1859 dbSNP
rs1420648233 1859 dbSNP
rs955890012 1868 dbSNP
rs1185914748 1874 dbSNP
rs981732281 1884 dbSNP
rs1233700770 1887 dbSNP
rs1372978471 1889 dbSNP
rs1436271581 1895 dbSNP
rs928572555 1897 dbSNP
rs1197779292 1899 dbSNP
rs1302935833 1899 dbSNP
rs1274905448 1913 dbSNP
rs992729547 1913 dbSNP
rs958655824 1915 dbSNP
rs190953744 1916 dbSNP
rs1279791192 1921 dbSNP
rs914429344 1923 dbSNP
rs776123295 1924 dbSNP
rs1442081221 1925 dbSNP
rs947451012 1926 dbSNP
rs969710273 1935 dbSNP
rs1163354969 1949 dbSNP
rs1404864589 1953 dbSNP
rs1306971580 1954 dbSNP
rs1408872748 1960 dbSNP
rs1226310560 1963 dbSNP
rs1160345440 1965 dbSNP
rs980170773 1967 dbSNP
rs1344237075 1970 dbSNP
rs1205539920 1971 dbSNP
rs1177783030 1972 dbSNP
rs533801816 1977 dbSNP
rs1254846207 1979 dbSNP
rs1219219944 1980 dbSNP
rs181214900 1982 dbSNP
rs1450940219 1986 dbSNP
rs1284390720 2003 dbSNP
rs924572580 2014 dbSNP
rs868400664 2023 dbSNP
rs567258123 2025 dbSNP
rs1192544405 2026 dbSNP
rs972502019 2031 dbSNP
rs1307994441 2040 dbSNP
rs1235519566 2053 dbSNP
rs1267634739 2056 dbSNP
rs918737496 2057 dbSNP
rs1448306254 2061 dbSNP
rs1041481562 2064 dbSNP
rs1392507323 2068 dbSNP
rs1379918162 2072 dbSNP
rs1430938444 2072 dbSNP
rs934168735 2076 dbSNP
rs900075698 2077 dbSNP
rs1459814038 2080 dbSNP
rs1294293742 2084 dbSNP
rs1051320458 2085 dbSNP
rs1048578159 2089 dbSNP
rs1361569920 2090 dbSNP
rs1218998154 2091 dbSNP
rs1486999345 2091 dbSNP
rs56994076 2091 dbSNP
rs576034668 2091 dbSNP
rs879536684 2091 dbSNP
rs888638261 2091 dbSNP
rs1363290833 2097 dbSNP
rs374803840 2098 dbSNP
rs1006357473 2099 dbSNP
rs1272360560 2100 dbSNP
rs768823395 2103 dbSNP
rs1014686012 2112 dbSNP
rs1436859328 2113 dbSNP
rs1366103284 2117 dbSNP
rs943006384 2120 dbSNP
rs1044110113 2128 dbSNP
rs1173764444 2130 dbSNP
rs575030468 2157 dbSNP
rs1420179462 2162 dbSNP
rs903886032 2163 dbSNP
rs1476788311 2166 dbSNP
rs961976618 2166 dbSNP
rs1002541882 2170 dbSNP
rs1035798563 2172 dbSNP
rs1486483453 2189 dbSNP
rs999541317 2193 dbSNP
rs1319645480 2198 dbSNP
rs1223533661 2203 dbSNP
rs1265595238 2204 dbSNP
rs542231836 2205 dbSNP
rs1308403827 2208 dbSNP
rs1275745988 2210 dbSNP
rs958597027 2212 dbSNP
rs1340415601 2218 dbSNP
rs774465788 2225 dbSNP
rs1377263184 2228 dbSNP
rs1031057972 2229 dbSNP
rs891594386 2231 dbSNP
rs1354945629 2234 dbSNP
rs1021384295 2240 dbSNP
rs1464062946 2252 dbSNP
rs1422817195 2255 dbSNP
rs1249341996 2263 dbSNP
rs1014504762 2264 dbSNP
rs1475861554 2265 dbSNP
rs1181769366 2268 dbSNP
rs1253685334 2271 dbSNP
rs968529176 2277 dbSNP
rs12005106 2279 dbSNP
rs185834318 2280 dbSNP
rs117584413 2281 dbSNP
rs190548159 2282 dbSNP
rs1317897647 2288 dbSNP
rs12005135 2294 dbSNP
rs924714800 2303 dbSNP
rs538474008 2304 dbSNP
rs1312066119 2315 dbSNP
rs972451000 2319 dbSNP
rs918347779 2322 dbSNP
rs1375792078 2324 dbSNP
rs1333186361 2328 dbSNP
rs976764060 2339 dbSNP
rs1326447655 2346 dbSNP
rs1322848933 2352 dbSNP
rs1459018398 2361 dbSNP
rs1366259017 2363 dbSNP
rs1163428407 2364 dbSNP
rs760509424 2364 dbSNP
rs1409694016 2371 dbSNP
rs1177174473 2372 dbSNP
rs1457545542 2372 dbSNP
rs921291811 2372 dbSNP
rs1216150605 2385 dbSNP
rs544442050 2395 dbSNP
rs987372810 2396 dbSNP
rs183106680 2402 dbSNP
rs1307264470 2403 dbSNP
rs1237724558 2404 dbSNP
rs1375817536 2406 dbSNP
rs1326312751 2413 dbSNP
rs1037645515 2421 dbSNP
rs1388486934 2424 dbSNP
rs897566425 2428 dbSNP
rs1453782910 2431 dbSNP
rs1362066980 2433 dbSNP
rs942927104 2443 dbSNP
rs1313144669 2444 dbSNP
rs1156416849 2446 dbSNP
rs768522202 2448 dbSNP
rs1043972949 2452 dbSNP
rs903833468 2460 dbSNP
rs529775863 2461 dbSNP
rs1035295488 2463 dbSNP
rs879412392 2471 dbSNP
rs1052431344 2472 dbSNP
rs187747954 2482 dbSNP
rs368197599 2489 dbSNP
rs1284169641 2492 dbSNP
rs1474069856 2507 dbSNP
rs74467850 2508 dbSNP
rs1411644965 2509 dbSNP
rs1235129635 2513 dbSNP
rs1348838858 2513 dbSNP
rs968644290 2513 dbSNP
rs552603039 2522 dbSNP
rs1300425249 2526 dbSNP
rs372102667 2532 dbSNP
rs1016874965 2533 dbSNP
rs1341784055 2536 dbSNP
rs1295778846 2544 dbSNP
rs192336115 2546 dbSNP
rs1375661665 2547 dbSNP
rs993839009 2551 dbSNP
rs1025356341 2552 dbSNP
rs1332286656 2553 dbSNP
rs1361026335 2554 dbSNP
rs536662565 2557 dbSNP
rs79362723 2572 dbSNP
rs1261180160 2573 dbSNP
rs1349628601 2584 dbSNP
rs1193039553 2586 dbSNP
rs1226371424 2590 dbSNP
rs1486156156 2590 dbSNP
rs1201967572 2600 dbSNP
rs1342564781 2600 dbSNP
rs1289790543 2601 dbSNP
rs977262987 2601 dbSNP
rs182363485 2602 dbSNP
rs1275819238 2605 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_ControlA_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cgguucccuuaccguCCCUUUa 5'
                         |||||| 
Target 5' -------------uuGGGAAAa 3'
1 - 9
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_ControlA_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell Control A
Location of target site ENST00000277225.5 | 3UTR | UUGGGAAAAAAAAACAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
223 hsa-miR-4446-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT078060 PCTP phosphatidylcholine transfer protein 2 2
MIRT099072 FOXC1 forkhead box C1 2 2
MIRT130186 TXNIP thioredoxin interacting protein 2 2
MIRT148786 NARS asparaginyl-tRNA synthetase 2 2
MIRT261965 SEPHS1 selenophosphate synthetase 1 2 2
MIRT345867 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT409087 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT451883 SOD2 superoxide dismutase 2 2 4
MIRT469236 RHOB ras homolog family member B 2 2
MIRT469435 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT483055 FOXB1 forkhead box B1 2 8
MIRT484640 TBC1D5 TBC1 domain family member 5 2 6
MIRT493106 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT497307 TMEFF2 transmembrane protein with EGF like and two follistatin like domains 2 2 2
MIRT497798 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT501273 SCARB2 scavenger receptor class B member 2 2 4
MIRT506756 KMT2D lysine methyltransferase 2D 2 2
MIRT511986 EEF2 eukaryotic translation elongation factor 2 2 4
MIRT513126 ZNF431 zinc finger protein 431 2 2
MIRT519733 ZNF394 zinc finger protein 394 2 4
MIRT520351 UBE2K ubiquitin conjugating enzyme E2 K 2 4
MIRT520542 TPPP tubulin polymerization promoting protein 2 8
MIRT530782 HDHD2 haloacid dehalogenase like hydrolase domain containing 2 2 2
MIRT531112 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT532144 GALNT8 polypeptide N-acetylgalactosaminyltransferase 8 2 2
MIRT533208 WAPAL WAPL cohesin release factor 2 2
MIRT533419 TWF1 twinfilin actin binding protein 1 2 2
MIRT534063 SRSF10 serine and arginine rich splicing factor 10 2 2
MIRT534288 SLAIN2 SLAIN motif family member 2 2 2
MIRT537796 EFNB2 ephrin B2 2 2
MIRT538017 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT538058 DMD dystrophin 2 2
MIRT538132 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT538680 CCDC80 coiled-coil domain containing 80 2 2
MIRT538788 C3orf52 chromosome 3 open reading frame 52 2 2
MIRT542762 PPAP2B phospholipid phosphatase 3 2 2
MIRT546861 RAB10 RAB10, member RAS oncogene family 2 4
MIRT547418 MED4 mediator complex subunit 4 2 4
MIRT551633 TRUB1 TruB pseudouridine synthase family member 1 2 4
MIRT552329 ZNF704 zinc finger protein 704 2 2
MIRT556124 MFSD9 major facilitator superfamily domain containing 9 2 4
MIRT559290 ATXN1 ataxin 1 2 2
MIRT562125 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT563777 HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 2 2
MIRT564430 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT566102 RBPJ recombination signal binding protein for immunoglobulin kappa J region 2 2
MIRT567126 IRF2BP2 interferon regulatory factor 2 binding protein 2 2 2
MIRT571213 RRS1 ribosome biogenesis regulator homolog 2 2
MIRT571939 LCLAT1 lysocardiolipin acyltransferase 1 2 2
MIRT571967 KIF21A kinesin family member 21A 2 2
MIRT606792 IL1RAPL1 interleukin 1 receptor accessory protein like 1 2 8
MIRT607351 TNS1 tensin 1 2 4
MIRT609416 GJB7 gap junction protein beta 7 2 4
MIRT609522 AZI2 5-azacytidine induced 2 2 4
MIRT611218 FAM174B family with sequence similarity 174 member B 2 2
MIRT611385 TRIP10 thyroid hormone receptor interactor 10 2 2
MIRT612053 KLB klotho beta 2 4
MIRT612102 CHRM3 cholinergic receptor muscarinic 3 2 2
MIRT612146 SIX1 SIX homeobox 1 2 4
MIRT612488 SIX3 SIX homeobox 3 2 4
MIRT613685 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613763 TTC38 tetratricopeptide repeat domain 38 2 2
MIRT613876 FGD1 FYVE, RhoGEF and PH domain containing 1 2 2
MIRT613965 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 4
MIRT614894 PAPOLG poly(A) polymerase gamma 2 2
MIRT614912 NFIA nuclear factor I A 2 2
MIRT615013 ERGIC2 ERGIC and golgi 2 2 2
MIRT615106 BCL7A BCL tumor suppressor 7A 2 2
MIRT615242 FAM227A family with sequence similarity 227 member A 2 4
MIRT615695 NEGR1 neuronal growth regulator 1 2 2
MIRT615956 ERBB3 erb-b2 receptor tyrosine kinase 3 2 4
MIRT615979 FSTL4 follistatin like 4 2 2
MIRT616053 PTPRE protein tyrosine phosphatase, receptor type E 2 4
MIRT616073 TBX2 T-box 2 2 4
MIRT616234 NPAS3 neuronal PAS domain protein 3 2 2
MIRT616306 CELF2 CUGBP Elav-like family member 2 2 2
MIRT616474 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT616662 ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 2 2
MIRT616887 ATP5E ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit 2 2
MIRT616902 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT617025 SYT6 synaptotagmin 6 2 2
MIRT617162 SLC16A5 solute carrier family 16 member 5 2 2
MIRT617318 DPF3 double PHD fingers 3 2 2
MIRT617792 CHRM2 cholinergic receptor muscarinic 2 2 2
MIRT618418 DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 2 2
MIRT618663 RPP40 ribonuclease P/MRP subunit p40 2 2
MIRT620212 VN1R1 vomeronasal 1 receptor 1 2 2
MIRT620413 TFDP3 transcription factor Dp family member 3 2 2
MIRT620667 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT620709 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT620956 SFT2D2 SFT2 domain containing 2 2 2
MIRT621225 LMAN1 lectin, mannose binding 1 2 2
MIRT621333 SLC11A1 solute carrier family 11 member 1 2 2
MIRT621696 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT623484 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT623777 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT624215 DCAF5 DDB1 and CUL4 associated factor 5 2 2
MIRT624675 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 2 2
MIRT627369 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT628252 EFCAB14 EF-hand calcium binding domain 14 2 2
MIRT630790 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT635631 PRR15L proline rich 15 like 2 2
MIRT636425 MARCH1 membrane associated ring-CH-type finger 1 2 2
MIRT637295 ACTN2 actinin alpha 2 2 2
MIRT637345 PIGP phosphatidylinositol glycan anchor biosynthesis class P 2 2
MIRT637842 SLC2A9 solute carrier family 2 member 9 2 2
MIRT638327 RCAN1 regulator of calcineurin 1 2 2
MIRT638375 RABL3 RAB, member of RAS oncogene family like 3 2 2
MIRT638751 EPHA4 EPH receptor A4 2 2
MIRT638965 ARHGAP6 Rho GTPase activating protein 6 2 2
MIRT639094 GLIPR1L2 GLI pathogenesis related 1 like 2 2 2
MIRT639172 CEP70 centrosomal protein 70 2 2
MIRT639254 SLC38A1 solute carrier family 38 member 1 2 4
MIRT639368 ZCCHC24 zinc finger CCHC-type containing 24 2 4
MIRT639504 CACNA1G calcium voltage-gated channel subunit alpha1 G 2 2
MIRT639644 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT640486 EXOC5 exocyst complex component 5 2 2
MIRT641424 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT641550 LIPG lipase G, endothelial type 2 2
MIRT642180 TOR1AIP1 torsin 1A interacting protein 1 2 2
MIRT642656 RGS6 regulator of G protein signaling 6 2 2
MIRT642873 SAMD1 sterile alpha motif domain containing 1 2 2
MIRT643355 TRIM10 tripartite motif containing 10 2 2
MIRT643531 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 2 2
MIRT643998 PPP1R3G protein phosphatase 1 regulatory subunit 3G 2 2
MIRT644105 PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 2 2
MIRT644421 VDR vitamin D receptor 2 2
MIRT644481 SLFN12 schlafen family member 12 2 2
MIRT644573 SPOP speckle type BTB/POZ protein 2 2
MIRT645354 SPNS1 sphingolipid transporter 1 (putative) 2 2
MIRT645383 FBLIM1 filamin binding LIM protein 1 2 2
MIRT645758 SURF6 surfeit 6 2 2
MIRT646060 VANGL2 VANGL planar cell polarity protein 2 2 2
MIRT646194 DUSP10 dual specificity phosphatase 10 2 2
MIRT647915 RGS5 regulator of G protein signaling 5 2 2
MIRT649216 AMMECR1L AMMECR1 like 2 2
MIRT649265 C17orf64 chromosome 17 open reading frame 64 2 2
MIRT649522 GTF3C3 general transcription factor IIIC subunit 3 2 2
MIRT649605 ITPKC inositol-trisphosphate 3-kinase C 2 2
MIRT650392 ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 2 2
MIRT650835 SEMA4G semaphorin 4G 2 2
MIRT651273 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT651674 VPS37A VPS37A, ESCRT-I subunit 2 2
MIRT651763 VASP vasodilator stimulated phosphoprotein 2 2
MIRT652250 TPD52L3 tumor protein D52 like 3 2 2
MIRT652277 TOM1L2 target of myb1 like 2 membrane trafficking protein 2 2
MIRT652316 TNFSF15 TNF superfamily member 15 2 2
MIRT652342 TMOD3 tropomodulin 3 2 2
MIRT652373 TMEM57 transmembrane protein 57 2 2
MIRT652438 TMEM236 transmembrane protein 236 2 2
MIRT652723 TGFB2 transforming growth factor beta 2 2 2
MIRT652752 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT653310 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT653327 SMIM18 small integral membrane protein 18 2 2
MIRT653406 SLC7A2 solute carrier family 7 member 2 2 2
MIRT653512 SLC41A1 solute carrier family 41 member 1 2 2
MIRT653912 SERPINC1 serpin family C member 1 2 2
MIRT654111 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT654153 RORB RAR related orphan receptor B 2 2
MIRT654548 RAB14 RAB14, member RAS oncogene family 2 2
MIRT654920 POLR3D RNA polymerase III subunit D 2 2
MIRT655169 PHF19 PHD finger protein 19 2 2
MIRT655412 PAN2 PAN2 poly(A) specific ribonuclease subunit 2 2
MIRT655784 NOVA2 NOVA alternative splicing regulator 2 2 2
MIRT655836 NGDN neuroguidin 2 2
MIRT656079 MTA3 metastasis associated 1 family member 3 2 2
MIRT656404 MCTP1 multiple C2 and transmembrane domain containing 1 2 2
MIRT656720 LMLN leishmanolysin like peptidase 2 2
MIRT656774 LARP1 La ribonucleoprotein domain family member 1 2 2
MIRT656922 KIAA1462 junctional cadherin 5 associated 2 2
MIRT657004 KCNMB4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 2 2
MIRT657477 HCAR2 hydroxycarboxylic acid receptor 2 2 2
MIRT657539 GSTO2 glutathione S-transferase omega 2 2 2
MIRT657911 GCC1 GRIP and coiled-coil domain containing 1 2 2
MIRT658478 EXOC8 exocyst complex component 8 2 2
MIRT658612 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 2
MIRT658823 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT658965 DNAJB5 DnaJ heat shock protein family (Hsp40) member B5 2 4
MIRT659706 CCDC93 coiled-coil domain containing 93 2 2
MIRT660034 C15orf61 chromosome 15 open reading frame 61 2 2
MIRT660108 BTBD3 BTB domain containing 3 2 2
MIRT660697 AMOTL2 angiomotin like 2 2 2
MIRT660763 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT660884 ADCYAP1R1 ADCYAP receptor type I 2 2
MIRT660956 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT661217 SCIMP SLP adaptor and CSK interacting membrane protein 2 2
MIRT661596 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT661624 UGT2B28 UDP glucuronosyltransferase family 2 member B28 2 2
MIRT662430 EID2 EP300 interacting inhibitor of differentiation 2 2 2
MIRT664816 NOX5 NADPH oxidase 5 2 2
MIRT665548 UCHL5 ubiquitin C-terminal hydrolase L5 2 2
MIRT665815 TMEM161B transmembrane protein 161B 2 2
MIRT666668 RBM23 RNA binding motif protein 23 2 2
MIRT667995 HCFC2 host cell factor C2 2 2
MIRT668064 GPR180 G protein-coupled receptor 180 2 2
MIRT669056 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 2
MIRT669637 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT699368 SLC30A6 solute carrier family 30 member 6 2 2
MIRT699882 RUNX1 runt related transcription factor 1 2 2
MIRT703834 ETV3 ETS variant 3 2 2
MIRT708528 ZNF177 zinc finger protein 177 2 2
MIRT709696 DMWD DM1 locus, WD repeat containing 2 2
MIRT710381 PARD6G par-6 family cell polarity regulator gamma 2 2
MIRT710639 GLUL glutamate-ammonia ligase 2 2
MIRT711584 SETD1A SET domain containing 1A 2 2
MIRT713208 FAM13A family with sequence similarity 13 member A 2 2
MIRT714129 IL20RB interleukin 20 receptor subunit beta 2 2
MIRT714204 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT714733 CCNO cyclin O 2 2
MIRT714761 ZNF462 zinc finger protein 462 2 2
MIRT715624 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT715755 SKA2 spindle and kinetochore associated complex subunit 2 2 2
MIRT716075 RNF150 ring finger protein 150 2 2
MIRT716179 MTRNR2L1 MT-RNR2-like 1 2 2
MIRT717450 RWDD2A RWD domain containing 2A 2 2
MIRT717866 CACNA2D1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 2 2
MIRT720964 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT721564 SLC5A12 solute carrier family 5 member 12 2 2
MIRT722348 BAG2 BCL2 associated athanogene 2 2 2
MIRT723235 BTLA B and T lymphocyte associated 2 2
MIRT724018 LMBRD2 LMBR1 domain containing 2 2 2
MIRT724507 KLHL5 kelch like family member 5 2 2
MIRT725478 GPR26 G protein-coupled receptor 26 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4446 Aed Therapy sensitive High Epilepsy tissue
hsa-mir-4446 Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-4446 Androstenedione+Letrozole sensitive cell line (MCF-7)
hsa-mir-4446 Tamoxifen 2733525 NSC180973 approved resistant cell line (MCF7)
hsa-mir-4446 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-mir-4446 Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)
hsa-miR-4446-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-4446-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4446-5p Neoadjuvant chemotherapy resistant tissue (breast cancer)
hsa-miR-4446-5p Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)

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