miRTarBase - #MIRT716132


—
pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol THOC5   
Synonyms C22orf19, Fmip, PK1.3, fSAP79
Description THO complex 5
Transcript NM_001002877   
Other Transcripts NM_001002878 , NM_001002879 , NM_003678   
Expression
Putative miRNA Targets on THOC5
3'UTR of THOC5
(miRNA target sites are highlighted)		 
>THOC5|NM_001002877|3'UTR
   1 TCTCCCGCGCAGACCGTTGTTTCCCCCAAGGCCTCACCCTGAGCACTGGGCTTCTGCTTTCTGCTCTGGCCCACATGTGA
  81 CTCTTGATATTCTCCAAAGACACCAGCCAATTAAAAAGCGTCACCTGACCAGTGGCCTTTGTCTGTGGTTCCTGGCAAGG
 161 TGGCTTTGCAGTCTGGAAGGGCAGGTGGGAGCTGTGACACAGTGTGAAAAAGCATTTGTAGAGAGACTTTTTCTCAGCAG
 241 CCAATAAAAGCAGAGTGGAAAAAGATTCCAATTCTGCAGAGAGATGCTCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucgguCGGUUGAGUGUCACGUCu 5'
               || : || : || |||| 
Target 5' gctttGCAGTCTGGAAGGGCAGg 3'
 163 - 185 118.00 -12.30
2 
miRNA  3' ucgGUCGGUUG----AGUGUCACGUcu 5'
             |||||||:     || |||| |  
Target 5' cagCAGCCAATAAAAGCAGAGTGGAaa 3'
 235 - 261 114.00 -17.90
3 
miRNA  3' ucgguCGGUUGAGU-GUCACgucu 5'
               |:|| || | |||||    
Target 5' aaagcGTCACCTGACCAGTGgcct 3'
 115 - 138 102.00 -11.56
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30508870 5 COSMIC
COSN30101570 6 COSMIC
COSN30459292 6 COSMIC
COSN30140887 22 COSMIC
COSN30474545 25 COSMIC
COSN26998532 33 COSMIC
COSN28202177 46 COSMIC
COSN18744040 92 COSMIC
COSN10029340 96 COSMIC
COSN30155449 111 COSMIC
COSN20080163 119 COSMIC
COSN1896938 638 COSMIC
COSN20833560 739 COSMIC
COSN20827455 770 COSMIC
COSN10029339 1715 COSMIC
COSN27949759 1761 COSMIC
COSN17828908 2077 COSMIC
COSN10029338 2304 COSMIC
COSN20678662 2356 COSMIC
COSN22557694 2357 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1409439505 4 dbSNP
rs746024551 6 dbSNP
rs138285743 7 dbSNP
rs752502433 8 dbSNP
rs371255642 9 dbSNP
rs1170693339 10 dbSNP
rs754950886 13 dbSNP
rs963296456 15 dbSNP
rs201511253 16 dbSNP
rs1181080862 17 dbSNP
rs375282870 18 dbSNP
rs1407665873 21 dbSNP
rs200515917 22 dbSNP
rs1036427056 23 dbSNP
rs750004334 24 dbSNP
rs955389490 25 dbSNP
rs377541596 27 dbSNP
rs199551204 29 dbSNP
rs774766536 31 dbSNP
rs1481965530 32 dbSNP
rs769077769 33 dbSNP
rs763387488 43 dbSNP
rs1228111754 44 dbSNP
rs1348871981 46 dbSNP
rs775993144 47 dbSNP
rs1258496175 50 dbSNP
rs757767040 51 dbSNP
rs1466756264 66 dbSNP
rs1410943659 74 dbSNP
rs1163236191 79 dbSNP
rs16987728 90 dbSNP
rs539965038 90 dbSNP
rs774594583 91 dbSNP
rs1049536 92 dbSNP
rs1052276674 95 dbSNP
rs1239644955 104 dbSNP
rs563665110 106 dbSNP
rs1000667538 118 dbSNP
rs543805253 119 dbSNP
rs373129453 120 dbSNP
rs987826362 121 dbSNP
rs1413613136 129 dbSNP
rs1331702677 140 dbSNP
rs1328094662 143 dbSNP
rs1228121068 144 dbSNP
rs1269559999 147 dbSNP
rs947738111 150 dbSNP
rs576528324 151 dbSNP
rs960418597 155 dbSNP
rs1236240969 158 dbSNP
rs1281294168 162 dbSNP
rs1035066069 169 dbSNP
rs1200716688 171 dbSNP
rs1198773229 177 dbSNP
rs917562768 180 dbSNP
rs1447677903 185 dbSNP
rs1193051940 187 dbSNP
rs561524288 189 dbSNP
rs1056032918 191 dbSNP
rs970085370 195 dbSNP
rs1174719782 196 dbSNP
rs181906152 198 dbSNP
rs781189289 199 dbSNP
rs572695585 200 dbSNP
rs962903427 208 dbSNP
rs911492519 210 dbSNP
rs995034954 215 dbSNP
rs1317484760 222 dbSNP
rs1285817106 232 dbSNP
rs1442826378 233 dbSNP
rs1444327090 235 dbSNP
rs985712830 245 dbSNP
rs897969837 254 dbSNP
rs1015026843 257 dbSNP
rs1009361652 261 dbSNP
rs1351408286 264 dbSNP
rs890461910 272 dbSNP
rs1204642682 274 dbSNP
rs776349552 285 dbSNP
rs955791851 291 dbSNP
rs1194618604 294 dbSNP
rs1331661224 301 dbSNP
rs1029684202 302 dbSNP
rs141625226 303 dbSNP
rs956113184 324 dbSNP
rs538895018 325 dbSNP
rs1405370328 340 dbSNP
rs1386325394 341 dbSNP
rs1326523063 347 dbSNP
rs1369924740 355 dbSNP
rs747007245 356 dbSNP
rs1384865168 359 dbSNP
rs1309349538 363 dbSNP
rs1416606959 365 dbSNP
rs1207265294 374 dbSNP
rs1238415315 382 dbSNP
rs1001140242 386 dbSNP
rs1337552577 401 dbSNP
rs879037543 403 dbSNP
rs543474433 405 dbSNP
rs369627193 422 dbSNP
rs151282737 423 dbSNP
rs569322146 429 dbSNP
rs758066263 430 dbSNP
rs547824778 433 dbSNP
rs1180800624 434 dbSNP
rs143322354 439 dbSNP
rs5763289 452 dbSNP
rs1246271957 455 dbSNP
rs939060843 457 dbSNP
rs565865778 463 dbSNP
rs149196662 466 dbSNP
rs896945047 468 dbSNP
rs1038111435 469 dbSNP
rs941549190 472 dbSNP
rs536537270 476 dbSNP
rs757871927 490 dbSNP
rs1352771082 491 dbSNP
rs1309693662 495 dbSNP
rs752176694 497 dbSNP
rs1286706068 498 dbSNP
rs1027925255 500 dbSNP
rs1233996766 507 dbSNP
rs778468482 509 dbSNP
rs1293202018 519 dbSNP
rs973620778 525 dbSNP
rs565352507 534 dbSNP
rs934241795 543 dbSNP
rs550301445 555 dbSNP
rs1292519382 558 dbSNP
rs988852316 560 dbSNP
rs1203949103 562 dbSNP
rs1436597779 563 dbSNP
rs956015452 563 dbSNP
rs531881977 565 dbSNP
rs1296930840 569 dbSNP
rs1419603279 575 dbSNP
rs754636218 577 dbSNP
rs1361639783 579 dbSNP
rs1033121363 581 dbSNP
rs1422026089 586 dbSNP
rs561262977 589 dbSNP
rs543070514 595 dbSNP
rs1424742885 596 dbSNP
rs1428902305 601 dbSNP
rs1029064964 602 dbSNP
rs1377568755 607 dbSNP
rs144520174 608 dbSNP
rs77036794 609 dbSNP
rs1377592993 611 dbSNP
rs1384373281 612 dbSNP
rs1296960216 620 dbSNP
rs1226665797 640 dbSNP
rs1307213278 640 dbSNP
rs1272024940 643 dbSNP
rs1349680757 644 dbSNP
rs1210939004 648 dbSNP
rs1043638192 649 dbSNP
rs750036717 667 dbSNP
rs946602895 671 dbSNP
rs1487916808 678 dbSNP
rs892304179 679 dbSNP
rs1286562718 680 dbSNP
rs1217690035 682 dbSNP
rs1397088583 682 dbSNP
rs1012458574 686 dbSNP
rs1052739882 697 dbSNP
rs1432984801 704 dbSNP
rs574014316 705 dbSNP
rs1300199969 707 dbSNP
rs1433345179 718 dbSNP
rs1306135922 720 dbSNP
rs1034893412 729 dbSNP
rs993823726 732 dbSNP
rs1219415243 736 dbSNP
rs896809728 738 dbSNP
rs1219393938 741 dbSNP
rs1038422273 752 dbSNP
rs1044804463 753 dbSNP
rs1275744770 756 dbSNP
rs947722850 759 dbSNP
rs920221970 762 dbSNP
rs377011196 776 dbSNP
rs941134151 779 dbSNP
rs1254596271 787 dbSNP
rs889501687 788 dbSNP
rs1454572894 792 dbSNP
rs766772941 796 dbSNP
rs934147068 800 dbSNP
rs1361739536 803 dbSNP
rs1327628673 811 dbSNP
rs1423342733 814 dbSNP
rs560635512 818 dbSNP
rs545552904 819 dbSNP
rs578111138 821 dbSNP
rs1177112948 823 dbSNP
rs1328540502 837 dbSNP
rs557187916 838 dbSNP
rs925992186 849 dbSNP
rs536742688 851 dbSNP
rs575782313 852 dbSNP
rs1478154444 871 dbSNP
rs1023431761 879 dbSNP
rs954881735 883 dbSNP
rs761326819 891 dbSNP
rs772946620 892 dbSNP
rs1206700004 893 dbSNP
rs1188158320 894 dbSNP
rs990653080 900 dbSNP
rs561150409 906 dbSNP
rs1245196156 907 dbSNP
rs535904263 916 dbSNP
rs1325238991 917 dbSNP
rs1411268915 924 dbSNP
rs1471667475 931 dbSNP
rs994064417 937 dbSNP
rs750897283 939 dbSNP
rs565932140 940 dbSNP
rs767940263 941 dbSNP
rs547397151 942 dbSNP
rs1016609344 949 dbSNP
rs146665410 950 dbSNP
rs1349264292 953 dbSNP
rs1226058531 956 dbSNP
rs1295040220 964 dbSNP
rs1010191660 967 dbSNP
rs889585927 977 dbSNP
rs1287526474 978 dbSNP
rs571344507 984 dbSNP
rs550046915 990 dbSNP
rs906335722 995 dbSNP
rs1482080019 1011 dbSNP
rs1045221942 1014 dbSNP
rs143197270 1015 dbSNP
rs1419176670 1028 dbSNP
rs947744282 1030 dbSNP
rs901320466 1034 dbSNP
rs537289599 1035 dbSNP
rs934911466 1042 dbSNP
rs764090118 1043 dbSNP
rs1407450835 1044 dbSNP
rs77918415 1047 dbSNP
rs527705319 1048 dbSNP
rs528156184 1048 dbSNP
rs1282386313 1054 dbSNP
rs1228879357 1056 dbSNP
rs749662972 1056 dbSNP
rs916030918 1057 dbSNP
rs922090255 1059 dbSNP
rs1172507035 1060 dbSNP
rs975236068 1064 dbSNP
rs1441950635 1070 dbSNP
rs560789563 1071 dbSNP
rs968814428 1080 dbSNP
rs960090927 1090 dbSNP
rs1010224162 1092 dbSNP
rs545383761 1104 dbSNP
rs1389134305 1106 dbSNP
rs1427475867 1108 dbSNP
rs1175150879 1113 dbSNP
rs369960572 1114 dbSNP
rs1031356620 1115 dbSNP
rs1332038922 1121 dbSNP
rs375444575 1122 dbSNP
rs1435535047 1131 dbSNP
rs1236007001 1132 dbSNP
rs1197577755 1133 dbSNP
rs564096774 1137 dbSNP
rs1318053191 1144 dbSNP
rs1252534694 1158 dbSNP
rs544432807 1162 dbSNP
rs1344328199 1164 dbSNP
rs575718113 1172 dbSNP
rs1286954138 1187 dbSNP
rs1017264654 1192 dbSNP
rs554261539 1208 dbSNP
rs1321643039 1225 dbSNP
rs1005254248 1227 dbSNP
rs1246520338 1231 dbSNP
rs571211297 1237 dbSNP
rs5997487 1239 dbSNP
rs866348938 1240 dbSNP
rs1477398907 1245 dbSNP
rs376049674 1247 dbSNP
rs571950434 1249 dbSNP
rs1457659998 1252 dbSNP
rs1330976788 1254 dbSNP
rs898942981 1263 dbSNP
rs553994301 1289 dbSNP
rs1037436980 1293 dbSNP
rs900892199 1295 dbSNP
rs886077575 1296 dbSNP
rs940357139 1296 dbSNP
rs1052455889 1302 dbSNP
rs1053287579 1305 dbSNP
rs1266786596 1307 dbSNP
rs139507868 1320 dbSNP
rs571593354 1322 dbSNP
rs6006177 1329 dbSNP
rs1267602666 1331 dbSNP
rs770898542 1332 dbSNP
rs1196337068 1339 dbSNP
rs1165338103 1340 dbSNP
rs558475521 1345 dbSNP
rs1409740386 1363 dbSNP
rs1459246152 1364 dbSNP
rs1293937614 1367 dbSNP
rs111906532 1368 dbSNP
rs576073954 1369 dbSNP
rs1378220557 1374 dbSNP
rs529541258 1384 dbSNP
rs938776717 1385 dbSNP
rs919306389 1386 dbSNP
rs1177681865 1388 dbSNP
rs1286983009 1398 dbSNP
rs972581989 1399 dbSNP
rs1252139683 1415 dbSNP
rs988835267 1427 dbSNP
rs1245943398 1431 dbSNP
rs1265275214 1436 dbSNP
rs563680749 1437 dbSNP
rs1487729032 1439 dbSNP
rs956045746 1440 dbSNP
rs1253545086 1445 dbSNP
rs1266576726 1448 dbSNP
rs961497026 1478 dbSNP
rs1483089772 1479 dbSNP
rs909832286 1481 dbSNP
rs984424478 1492 dbSNP
rs953961190 1493 dbSNP
rs1165421988 1500 dbSNP
rs1455453248 1501 dbSNP
rs970702651 1505 dbSNP
rs1456202778 1511 dbSNP
rs1028003985 1517 dbSNP
rs1371461161 1524 dbSNP
rs76116255 1526 dbSNP
rs965127027 1527 dbSNP
rs1031422217 1530 dbSNP
rs189351620 1537 dbSNP
rs1397084222 1547 dbSNP
rs904676444 1548 dbSNP
rs1337758752 1549 dbSNP
rs1312645016 1551 dbSNP
rs1016034856 1561 dbSNP
rs1021772074 1562 dbSNP
rs1177105504 1576 dbSNP
rs1391495596 1578 dbSNP
rs1013599492 1582 dbSNP
rs527642151 1585 dbSNP
rs566740761 1586 dbSNP
rs932974750 1588 dbSNP
rs367931630 1593 dbSNP
rs938682907 1595 dbSNP
rs141834450 1597 dbSNP
rs1182308208 1604 dbSNP
rs184356900 1607 dbSNP
rs1470354380 1620 dbSNP
rs747634230 1624 dbSNP
rs778450214 1626 dbSNP
rs1196255254 1631 dbSNP
rs562879846 1635 dbSNP
rs988856424 1644 dbSNP
rs1429400942 1649 dbSNP
rs1166972028 1655 dbSNP
rs934799710 1657 dbSNP
rs754597115 1658 dbSNP
rs1466631302 1662 dbSNP
rs909722131 1668 dbSNP
rs544366896 1675 dbSNP
rs1298865426 1677 dbSNP
rs970443836 1680 dbSNP
rs932567388 1685 dbSNP
rs1225439806 1692 dbSNP
rs1023574838 1696 dbSNP
rs921142740 1697 dbSNP
rs529469299 1701 dbSNP
rs560603728 1702 dbSNP
rs1210280821 1707 dbSNP
rs1255332810 1708 dbSNP
rs1482256870 1710 dbSNP
rs542368030 1717 dbSNP
rs192769964 1718 dbSNP
rs965034989 1719 dbSNP
rs1186851832 1720 dbSNP
rs1004716438 1731 dbSNP
rs886224972 1734 dbSNP
rs1175501916 1740 dbSNP
rs1031453506 1741 dbSNP
rs1357906506 1746 dbSNP
rs79963234 1747 dbSNP
rs1321845369 1751 dbSNP
rs1232770476 1756 dbSNP
rs997217608 1757 dbSNP
rs746359339 1770 dbSNP
rs900145330 1770 dbSNP
rs1331804646 1775 dbSNP
rs1011742230 1780 dbSNP
rs1039277237 1780 dbSNP
rs1369361822 1780 dbSNP
rs1285260972 1785 dbSNP
rs150540332 1788 dbSNP
rs1230108002 1789 dbSNP
rs1268709717 1791 dbSNP
rs1053249051 1800 dbSNP
rs934810406 1803 dbSNP
rs1248641523 1816 dbSNP
rs1022220117 1821 dbSNP
rs1488959842 1823 dbSNP
rs1190855772 1825 dbSNP
rs577972633 1827 dbSNP
rs1297447874 1828 dbSNP
rs1046207030 1833 dbSNP
rs1013047028 1835 dbSNP
rs948761792 1839 dbSNP
rs894771793 1840 dbSNP
rs915879594 1844 dbSNP
rs868101210 1845 dbSNP
rs1002860386 1846 dbSNP
rs1436687795 1848 dbSNP
rs1170496131 1851 dbSNP
rs756461478 1857 dbSNP
rs909122676 1867 dbSNP
rs750758686 1868 dbSNP
rs1291701773 1876 dbSNP
rs1322140828 1880 dbSNP
rs1221027138 1887 dbSNP
rs942120464 1889 dbSNP
rs453802 1891 dbSNP
rs1476521644 1894 dbSNP
rs373051 1896 dbSNP
rs1484067719 1897 dbSNP
rs1263132011 1899 dbSNP
rs1030102776 1909 dbSNP
rs527818550 1910 dbSNP
rs887831663 1920 dbSNP
rs1449139604 1922 dbSNP
rs1471924470 1929 dbSNP
rs1165531349 1930 dbSNP
rs1414925052 1938 dbSNP
rs142601648 1940 dbSNP
rs964357674 1945 dbSNP
rs1363404219 1946 dbSNP
rs1411096872 1955 dbSNP
rs148457797 1956 dbSNP
rs921215019 1957 dbSNP
rs537990434 1969 dbSNP
rs5997486 1973 dbSNP
rs1379548885 1975 dbSNP
rs1227586567 1984 dbSNP
rs943708937 1986 dbSNP
rs1277530770 1990 dbSNP
rs1431356085 1993 dbSNP
rs1328038919 1997 dbSNP
rs1344626093 2000 dbSNP
rs1331944214 2003 dbSNP
rs1205929581 2004 dbSNP
rs1053279913 2005 dbSNP
rs1395169660 2007 dbSNP
rs1406378497 2010 dbSNP
rs1436182423 2012 dbSNP
rs924286212 2013 dbSNP
rs1463634775 2014 dbSNP
rs555574892 2015 dbSNP
rs1169050263 2018 dbSNP
rs968876714 2019 dbSNP
rs534034349 2021 dbSNP
rs1021373938 2025 dbSNP
rs992103105 2035 dbSNP
rs1045822893 2050 dbSNP
rs958853675 2055 dbSNP
rs781177337 2057 dbSNP
rs1168874202 2059 dbSNP
rs183876853 2063 dbSNP
rs5763288 2064 dbSNP
rs1336074021 2069 dbSNP
rs1341059425 2071 dbSNP
rs552511206 2072 dbSNP
rs1312706893 2074 dbSNP
rs1038418297 2082 dbSNP
rs1229361086 2083 dbSNP
rs941323002 2091 dbSNP
rs1258776412 2093 dbSNP
rs1337463438 2102 dbSNP
rs1202319712 2108 dbSNP
rs1279917663 2114 dbSNP
rs1442400822 2118 dbSNP
rs192102602 2126 dbSNP
rs1341392480 2128 dbSNP
rs751683964 2130 dbSNP
rs1450489977 2144 dbSNP
rs1243824307 2146 dbSNP
rs887897323 2154 dbSNP
rs1372201959 2163 dbSNP
rs550867416 2164 dbSNP
rs1474136438 2178 dbSNP
rs1173857647 2184 dbSNP
rs1050524753 2186 dbSNP
rs529406744 2188 dbSNP
rs983742535 2198 dbSNP
rs1413788682 2200 dbSNP
rs187232990 2203 dbSNP
rs755755211 2215 dbSNP
rs1400132061 2229 dbSNP
rs1320139484 2237 dbSNP
rs867913511 2248 dbSNP
rs184844481 2251 dbSNP
rs5752933 2254 dbSNP
rs1275461870 2261 dbSNP
rs1017292208 2264 dbSNP
rs144569302 2271 dbSNP
rs1270595176 2272 dbSNP
rs1011227170 2273 dbSNP
rs1162175628 2276 dbSNP
rs924513853 2277 dbSNP
rs763245244 2278 dbSNP
rs1208565709 2283 dbSNP
rs1444826552 2293 dbSNP
rs573971125 2294 dbSNP
rs765405751 2296 dbSNP
rs1377657717 2297 dbSNP
rs1479826589 2299 dbSNP
rs1174106442 2302 dbSNP
rs1414165832 2311 dbSNP
rs1457160031 2311 dbSNP
rs5997485 2317 dbSNP
rs1206522284 2319 dbSNP
rs1382536132 2322 dbSNP
rs1388702976 2323 dbSNP
rs1324463517 2333 dbSNP
rs958427544 2336 dbSNP
rs1449843127 2346 dbSNP
rs928817550 2348 dbSNP
rs1403248083 2352 dbSNP
rs999474550 2353 dbSNP
rs577713573 2354 dbSNP
rs962269963 2355 dbSNP
rs1024928262 2366 dbSNP
rs1358944553 2368 dbSNP
rs1211196469 2375 dbSNP
rs1267626566 2383 dbSNP
rs562730287 2386 dbSNP
rs866557721 2389 dbSNP
rs1317442347 2391 dbSNP
rs1196705538 2393 dbSNP
rs1238341873 2399 dbSNP
rs1472849731 2399 dbSNP
rs865907379 2408 dbSNP
rs6006176 2409 dbSNP
rs193232712 2415 dbSNP
rs1164038430 2418 dbSNP
rs1422783829 2425 dbSNP
rs1029514799 2431 dbSNP
rs1348683013 2432 dbSNP
rs1351203188 2435 dbSNP
rs1047640883 2438 dbSNP
rs996279922 2447 dbSNP
rs5763287 2450 dbSNP
rs557533607 2451 dbSNP
rs1008063020 2452 dbSNP
rs370646134 2453 dbSNP
rs903134504 2462 dbSNP
rs1339588592 2469 dbSNP
rs1276104959 2470 dbSNP
rs1438759006 2472 dbSNP
rs1176497278 2473 dbSNP
rs1408415640 2478 dbSNP
rs1041624744 2480 dbSNP
rs947066979 2488 dbSNP
rs1425334820 2491 dbSNP
rs1384816339 2496 dbSNP
rs1422917772 2497 dbSNP
rs914264338 2499 dbSNP
rs561313764 2504 dbSNP
rs1178770439 2506 dbSNP
rs573223552 2507 dbSNP
rs1476976896 2511 dbSNP
rs1246074140 2512 dbSNP
rs989836095 2518 dbSNP
rs748078892 2521 dbSNP
rs558255633 2522 dbSNP
rs113029006 2526 dbSNP
rs527593809 2528 dbSNP
rs1342243553 2529 dbSNP
rs981614182 2530 dbSNP
rs977106563 2532 dbSNP
rs1214704912 2537 dbSNP
rs972096010 2539 dbSNP
rs1200983763 2544 dbSNP
rs1242258721 2550 dbSNP
rs8136249 2559 dbSNP
rs1190692268 2562 dbSNP
rs35756804 2564 dbSNP
rs1013119490 2566 dbSNP
rs908148211 2571 dbSNP
rs1427989056 2572 dbSNP
rs71324774 2572 dbSNP
rs1225859438 2577 dbSNP
rs1379470392 2577 dbSNP
rs1466969911 2578 dbSNP
rs76836499 2579 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucggucgguugagugUCACGUCu 5'
                         ||||||| 
Target 5' --------------gAGUGCAGu 3'
 		1 - 9
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions Prostate Tissue
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRX1760630. RNA binding protein: AGO2. Condition:AGO-CLIP-22RV1_A ...

- Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al., 2016, Neoplasia (New York, N.Y.).

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucggucGGUUGAGUGUCACGUCu 5'
                |||:  :: ||||||| 
Target 5' uguuguCCAGGCUGGAGUGCAGu 3'
 		2 - 24
Article - Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al.
- Neoplasia (New York, N.Y.), 2016
MicroRNA (miRNA) deregulation in prostate cancer (PCa) contributes to PCa initiation and metastatic progression. To comprehensively define the cancer-associated changes in miRNA targeting and function in commonly studied models of PCa, we performed photoactivatable ribonucleoside-enhanced cross-linking immunoprecipitation of the Argonaute protein in a panel of PCa cell lines modeling different stages of PCa progression. Using this comprehensive catalogue of miRNA targets, we analyzed miRNA targeting on known drivers of PCa and examined tissue-specific and stage-specific pathway targeting by miRNAs. We found that androgen receptor is the most frequently targeted PCa oncogene and that miR-148a targets the largest number of known PCa drivers. Globally, tissue-specific and stage-specific changes in miRNA targeting are driven by homeostatic response to active oncogenic pathways. Our findings indicate that, even in advanced PCa, the miRNA pool adapts to regulate continuing alterations in the cancer genome to balance oncogenic molecular changes. These findings are important because they are the first to globally characterize miRNA changes in PCa and demonstrate how the miRNA target spectrum responds to staged tumorigenesis.
LinkOut: [PMID: 27292025]
CLIP-seq Support 1 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000490103.1 | 3UTR | GAGUGCAGUGGCUCAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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