pre-miRNA Information
pre-miRNA hsa-mir-6751   
Genomic Coordinates chr11: 65129916 - 65129978
Description Homo sapiens miR-6751 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6751-3p
Sequence 43| ACUGAGCCUCUCUCUCUCCAG |63
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM6795708 8 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs749989972 2 dbSNP
rs1266150108 3 dbSNP
rs1488089412 6 dbSNP
rs1259846893 8 dbSNP
rs3802937 10 dbSNP
rs371083440 12 dbSNP
rs1264909843 13 dbSNP
rs751042478 14 dbSNP
rs757551063 19 dbSNP
Putative Targets

Gene Information
Gene Symbol CBLL1   
Synonyms HAKAI, RNF188
Description Cbl proto-oncogene like 1
Transcript NM_024814   
Expression
Putative miRNA Targets on CBLL1
3'UTR of CBLL1
(miRNA target sites are highlighted)
>CBLL1|NM_024814|3'UTR
   1 TAATAGTATTTTGAATGGAAGATATGAGGGGGAAAAAAACTTATGTGTAGTCAATCTTTTAAGCTTTGACTGTTTTGGGA
  81 AGGAAGAGTACCTCTTATCGAGGTAGTATAAAACACATAGGGTCTTGTTTCTTAAAATGGTTTTAAATCTTGACCTTAAG
 161 ATTGATTTCAAGTACCATACTGTAGTACAGATAAGTGGCTCAGTTGAGCACAGCTATATTTTAACATCTCTTTGTTCCCC
 241 TAGTTTAGTAAATTGACCCAGAGGTGACCATTTGTAAAAAATTTGAAAAAATTTTTCATTGTTTTACTTCAAAAGTATTG
 321 TTTTGTTAAACCCAACGTTTAGTTTTTCTTGTGATACATTTTGTTAACCTGTGTAAAAGGATTAAATTTCAATATGGTTG
 401 TAAAAATGCTATTTTTATGTGAATTTAAGTGCAGCCACATACTGTTTTTTAAACCATATGTTTTACCACTAATTTCCCAA
 481 AGTTATAATAAAATCCTGAAAGTAAAAATCTACTAGAATTTGCTGTAAGGCAGACTGTTAAATGATAGAGAATTATTTCA
 561 CATTTTAGGCACTGAAATGTTGAGGTTTCGAGGTATAGTAAGTATACAATGCACTTCACTTGGATGCCTTTTCATTTTTA
 641 GGCAGCCTCAGGAGCACCAAAATACATTGGAATTCTAGTACTAAGATATATTTGTTCGTAATGTTAAAAGACATTACTAA
 721 TTATTTGGAAAGAGATGGCCAAAATAATCAACTCTACAGGCTTCAAGCTGGTGGGGGAATGCTGTTACTCATTAATGCTT
 801 TTTTACTGAATGGTCGGAATCACATATGCACCACACATACTGATCTTAAGTAACATTATTTTATAGAACTGTTTAAATGG
 881 GTTTAAATGGTGTTCTTTAGATGAAATGTGTTCTGTTTTGTTCATTGTCTTAAACTGAATAGGGCTGAATAGGCTTTATG
 961 TAATTCTTCATTTCATGGTAGAGTTTGATGCTGTGTTTAAGTGGGTTCTTGTTTATAGGATTTTCAACTACAGTTTGAAT
1041 GCCATGGAGGAATTTGAATAATATATTAATGAAGGACATATTCTTGTAATCACAAATTTGCATTTGCTCAGGTTTCATTG
1121 CTGTGTGATAGGATTTTTCCTCTAACTTGAAATTTAAAAACTTTTATTTCCTATTCCTTTTGTCGGTAAAGCAGTCTGAA
1201 TTTGGAACATTTTATCATGGAGTCAACAGTGAAGACTACCAGATAATTTTGTATTGGAGAAGAGGAAATAACAGCTAAAT
1281 TGTGGATTTCAGTGCTTTACATGGTGCCTTTCGAGTCAGCTTTTACATTATAGGGGCTTGTTATAGTTTAGCTAAGATGA
1361 CCACTTAACAGTTTATACAGAACTCATATGTATAAATCAACATTCTTAGGATATTATTTATATCCTTTGAATAAATCCCT
1441 GTGAAGTTTTTCCTCCCCACTAAAATGGTGCATAATAAAACATGAAATATGTAGTATGCAGATATCATTTATTAGATAGT
1521 TTGTAGTGTATACATTTAGAACATACTTCTTTTGACAAAGGGTGATCTGATTGCTAATTTACCATTTTATTCTGTCAGGT
1601 ACAGGTGAAACAAATTCTCATCTTGAATGATCAGATGCAAAATCATTTCTGAACCCTAGAGCAGAAGTTAGAAATAACAA
1681 AATGGCCGTTTCAACCTTGACTGGCCAAAAATAACTAATAAACTTTTTTGTTTTAAGTCAGGCAAGTGATTTTCTACATT
1761 TAGCAGTTTGAAAGTCCAGTGTTAATGCAATATTTCTAGTGAGAAATGCTTGTTATTAAAAGCATGGGAGTGATAGTGTG
1841 AAATGGTGGTGAGTGCTTCTATCATATTACTGTAGGTACTTGGACTGGTGCAAACTTGATTCCTTTTCATCCCCCTGTTT
1921 AGGAGCTATTAAAATATTACTGTTAAAAATCCAAACCATTCTTTGTTCCATGTAATAAGAAAATAGCCAAAATCACTTTA
2001 GAGCTTCTCAACTATTTATGAAGAGCTATCCTGCTTTTATTGAAAGTCACTAGAGTTGAATGTGGTAAGAAACCACTTAG
2081 CCTATGTATTGGACGAGAAAATCAGTATCATGATAAAATTTTGAATTAAGAGAACCCTTGTAGAGTTTTTAAAAAATGAT
2161 TTATTTTCAATTAGGTTTAAGAAATCTATGTTATGCAGGGAGGCATATCAGATGAATGTTGTAGCAGACAAAAGTTTTAA
2241 ATCGTGTTAGACTTGAATTCATCAATTGTTTGAATGAGGGTGGGTGGGTAGAAGGATAACAAAATTACTGTTAGTGTTTC
2321 TTTCCTTACGGAAAAAGATGTGAATCCCAGCCTTATTTCAGGGAAGCCTTTGAAGCTATGATGGACATAAGTCTAAATTA
2401 AATGTATGTATGTTTCATTATATTGCTCTTAAGACTACTGAGGTGGCAGTTTAATTCTTAAAAACAATAAAATGGAAGCA
2481 TAAATACTAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaccUCUCUCUCUCCGAGUCa 5'
              ||| | || ||||||| 
Target 5' gtacAGATA-AGTGGCTCAGt 3'
185 - 204 156.00 -14.80
2
miRNA  3' gaccucucUCUCUCCGAGUCa 5'
                  ||: || ||||| 
Target 5' tcatttttAGGCAGCCTCAGg 3'
632 - 652 121.00 -9.10
3
miRNA  3' gaccucucucucucCGAGUCa 5'
                        |||||| 
Target 5' acaaatttgcatttGCTCAGg 3'
1092 - 1112 120.00 -7.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30490101 3 COSMIC
COSN1084082 21 COSMIC
COSN30526443 22 COSMIC
COSN30502979 30 COSMIC
COSN31503157 30 COSMIC
COSN14251401 36 COSMIC
COSN30646320 40 COSMIC
COSN31510116 51 COSMIC
COSN28186741 121 COSMIC
COSN30542250 182 COSMIC
COSN30164282 259 COSMIC
COSN31568182 298 COSMIC
COSN31548240 377 COSMIC
COSN18902819 511 COSMIC
COSN18902820 512 COSMIC
COSN31596210 513 COSMIC
COSN25555032 668 COSMIC
COSN6342782 675 COSMIC
COSN5643126 736 COSMIC
COSN6342783 822 COSMIC
COSN6515067 846 COSMIC
COSN5093728 1016 COSMIC
COSN32203342 1150 COSMIC
COSN14512612 1723 COSMIC
COSN29962459 1729 COSMIC
COSN20104624 1731 COSMIC
COSN6342784 1828 COSMIC
COSN9918776 2280 COSMIC
COSN21624364 2473 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs138385214 2 dbSNP
rs1354863646 5 dbSNP
rs778631272 6 dbSNP
rs745511176 16 dbSNP
rs1016712458 17 dbSNP
rs771763534 23 dbSNP
rs112687008 26 dbSNP
rs1269739832 26 dbSNP
rs1224973645 28 dbSNP
rs140265004 33 dbSNP
rs371380571 33 dbSNP
rs1183072099 34 dbSNP
rs560148680 36 dbSNP
rs1197205842 38 dbSNP
rs1224702197 38 dbSNP
rs1250544379 39 dbSNP
rs1353367859 39 dbSNP
rs1278292377 40 dbSNP
rs1471804539 43 dbSNP
rs529240098 44 dbSNP
rs773543641 45 dbSNP
rs766589586 48 dbSNP
rs149258520 51 dbSNP
rs759744039 53 dbSNP
rs887747659 55 dbSNP
rs1402218512 57 dbSNP
rs557275446 57 dbSNP
rs537259600 65 dbSNP
rs550465616 71 dbSNP
rs147383755 88 dbSNP
rs948779752 92 dbSNP
rs1459971917 95 dbSNP
rs1201694001 96 dbSNP
rs1479548505 98 dbSNP
rs1033747510 99 dbSNP
rs751435930 100 dbSNP
rs764937206 101 dbSNP
rs1282658945 105 dbSNP
rs1208598500 109 dbSNP
rs1381044244 111 dbSNP
rs961174989 115 dbSNP
rs1284567433 117 dbSNP
rs1366358051 118 dbSNP
rs539565842 118 dbSNP
rs1013734120 122 dbSNP
rs1270403726 123 dbSNP
rs1439119615 136 dbSNP
rs1432506916 137 dbSNP
rs1343188479 141 dbSNP
rs1157104730 148 dbSNP
rs1379527982 150 dbSNP
rs1319666114 156 dbSNP
rs62467974 161 dbSNP
rs1408234298 169 dbSNP
rs1043434095 172 dbSNP
rs904503489 178 dbSNP
rs1021253970 181 dbSNP
rs553085606 182 dbSNP
rs1400497638 186 dbSNP
rs1449710123 187 dbSNP
rs901010925 188 dbSNP
rs1188330754 192 dbSNP
rs1462111470 202 dbSNP
rs998015610 206 dbSNP
rs11971180 209 dbSNP
rs187354810 212 dbSNP
rs1202400574 214 dbSNP
rs1311068960 217 dbSNP
rs1028274609 229 dbSNP
rs1215909750 234 dbSNP
rs1359465398 243 dbSNP
rs1032013797 244 dbSNP
rs889688246 245 dbSNP
rs1453087385 247 dbSNP
rs568884776 249 dbSNP
rs1005241256 256 dbSNP
rs1445333424 259 dbSNP
rs190942684 267 dbSNP
rs953714311 269 dbSNP
rs985626631 270 dbSNP
rs1358598977 276 dbSNP
rs1171262752 281 dbSNP
rs1304423702 282 dbSNP
rs1411801362 286 dbSNP
rs912299546 293 dbSNP
rs1245395184 295 dbSNP
rs556036031 298 dbSNP
rs1483219340 302 dbSNP
rs1232908971 303 dbSNP
rs1206029118 307 dbSNP
rs73191636 313 dbSNP
rs1321112734 316 dbSNP
rs544813361 328 dbSNP
rs960233327 337 dbSNP
rs918538345 338 dbSNP
rs1395343235 345 dbSNP
rs931238898 348 dbSNP
rs1175485990 355 dbSNP
rs1298761236 358 dbSNP
rs1048262477 359 dbSNP
rs1269552449 366 dbSNP
rs1307617241 369 dbSNP
rs887799908 374 dbSNP
rs1425586086 375 dbSNP
rs1387412579 379 dbSNP
rs1163153819 386 dbSNP
rs1434039056 393 dbSNP
rs1409343067 397 dbSNP
rs1179537685 399 dbSNP
rs993394341 400 dbSNP
rs1222710978 412 dbSNP
rs564554663 412 dbSNP
rs1490747465 422 dbSNP
rs780817313 430 dbSNP
rs1317356773 433 dbSNP
rs140050990 443 dbSNP
rs1172034022 446 dbSNP
rs1222042939 447 dbSNP
rs1348680361 449 dbSNP
rs1307519760 451 dbSNP
rs1405731215 454 dbSNP
rs1367682948 457 dbSNP
rs1292064922 466 dbSNP
rs1457717964 472 dbSNP
rs949007740 473 dbSNP
rs979008275 480 dbSNP
rs1471909852 487 dbSNP
rs1410531602 489 dbSNP
rs1199518360 490 dbSNP
rs758277645 491 dbSNP
rs1481181347 496 dbSNP
rs1264808894 497 dbSNP
rs1400126098 502 dbSNP
rs1055649331 503 dbSNP
rs1262319883 510 dbSNP
rs1213493122 511 dbSNP
rs896565516 513 dbSNP
rs780066099 528 dbSNP
rs1287730065 534 dbSNP
rs1224215441 536 dbSNP
rs1014203168 537 dbSNP
rs745704931 539 dbSNP
rs1347542252 543 dbSNP
rs540368019 545 dbSNP
rs528365437 546 dbSNP
rs1001135291 551 dbSNP
rs1386474897 552 dbSNP
rs1296006348 561 dbSNP
rs1363038961 567 dbSNP
rs925952303 570 dbSNP
rs934609399 572 dbSNP
rs1388567538 576 dbSNP
rs1177860340 590 dbSNP
rs1053234944 591 dbSNP
rs529252273 598 dbSNP
rs922673240 604 dbSNP
rs144031157 610 dbSNP
rs1387033956 612 dbSNP
rs1263530473 618 dbSNP
rs1186448824 619 dbSNP
rs562029796 620 dbSNP
rs1050006941 621 dbSNP
rs1343433733 625 dbSNP
rs1205530825 629 dbSNP
rs1220177857 657 dbSNP
rs985123721 660 dbSNP
rs530687120 661 dbSNP
rs1254362182 666 dbSNP
rs1005892923 667 dbSNP
rs1038215280 669 dbSNP
rs1019822771 671 dbSNP
rs550827688 678 dbSNP
rs1433331918 681 dbSNP
rs1365006041 687 dbSNP
rs896827701 690 dbSNP
rs993790963 691 dbSNP
rs1399373392 695 dbSNP
rs181746612 698 dbSNP
rs965150398 699 dbSNP
rs972423374 703 dbSNP
rs1266972457 704 dbSNP
rs1166388233 714 dbSNP
rs1255952467 715 dbSNP
rs918424060 718 dbSNP
rs1023570736 725 dbSNP
rs539643554 728 dbSNP
rs546724002 729 dbSNP
rs1199957097 736 dbSNP
rs1485631868 745 dbSNP
rs1340222482 748 dbSNP
rs566534299 752 dbSNP
rs1226513284 754 dbSNP
rs554654556 755 dbSNP
rs147320646 758 dbSNP
rs1339227189 761 dbSNP
rs779693750 762 dbSNP
rs1332863449 767 dbSNP
rs927221803 772 dbSNP
rs938048050 774 dbSNP
rs1055123305 777 dbSNP
rs896441501 783 dbSNP
rs555036767 789 dbSNP
rs1417824372 793 dbSNP
rs1428734659 798 dbSNP
rs1457926717 799 dbSNP
rs922704590 799 dbSNP
rs1165245390 800 dbSNP
rs1471736673 806 dbSNP
rs1042472617 812 dbSNP
rs902696189 814 dbSNP
rs749008449 815 dbSNP
rs768142660 816 dbSNP
rs186049017 817 dbSNP
rs1401456737 819 dbSNP
rs1292871359 824 dbSNP
rs190471084 825 dbSNP
rs897066316 826 dbSNP
rs1339568295 831 dbSNP
rs182999577 835 dbSNP
rs1240452860 836 dbSNP
rs368038020 837 dbSNP
rs1285953611 838 dbSNP
rs780797432 839 dbSNP
rs111292759 841 dbSNP
rs1220848333 846 dbSNP
rs993898967 848 dbSNP
rs540087322 856 dbSNP
rs2106535 859 dbSNP
rs1489428874 864 dbSNP
rs1159049941 869 dbSNP
rs1471131929 874 dbSNP
rs1414223319 876 dbSNP
rs80259506 882 dbSNP
rs1262973009 893 dbSNP
rs1269848440 895 dbSNP
rs983902438 898 dbSNP
rs1474608839 902 dbSNP
rs1184135355 912 dbSNP
rs1450218091 912 dbSNP
rs1206199569 931 dbSNP
rs927234616 938 dbSNP
rs1415084425 950 dbSNP
rs1423893380 952 dbSNP
rs1162447448 954 dbSNP
rs958656329 961 dbSNP
rs1265633644 964 dbSNP
rs148809963 979 dbSNP
rs993112504 990 dbSNP
rs576599714 993 dbSNP
rs1276221026 994 dbSNP
rs540316115 1006 dbSNP
rs1433908218 1008 dbSNP
rs1330246648 1018 dbSNP
rs917941218 1019 dbSNP
rs776814588 1029 dbSNP
rs949336294 1031 dbSNP
rs1386371950 1032 dbSNP
rs1158406077 1036 dbSNP
rs1456769455 1045 dbSNP
rs1430118226 1046 dbSNP
rs1298392659 1051 dbSNP
rs1193088959 1056 dbSNP
rs1477182174 1059 dbSNP
rs1023345337 1066 dbSNP
rs1344416006 1076 dbSNP
rs970671156 1079 dbSNP
rs1466574809 1102 dbSNP
rs2106536 1112 dbSNP
rs1246723215 1114 dbSNP
rs1208697800 1118 dbSNP
rs1304522572 1120 dbSNP
rs1280152357 1122 dbSNP
rs1217075811 1144 dbSNP
rs186388597 1145 dbSNP
rs1379897483 1153 dbSNP
rs1000362527 1162 dbSNP
rs1436988078 1162 dbSNP
rs1227662293 1163 dbSNP
rs1313075511 1174 dbSNP
rs1042525329 1185 dbSNP
rs924002956 1186 dbSNP
rs370617694 1199 dbSNP
rs1453319223 1204 dbSNP
rs1359774890 1218 dbSNP
rs1417749436 1225 dbSNP
rs1178336050 1235 dbSNP
rs769552160 1237 dbSNP
rs1033289524 1238 dbSNP
rs1424711913 1241 dbSNP
rs936861650 1252 dbSNP
rs956257155 1253 dbSNP
rs1241192827 1255 dbSNP
rs543028196 1262 dbSNP
rs1053951313 1265 dbSNP
rs1246630106 1273 dbSNP
rs1445650402 1278 dbSNP
rs1015494877 1281 dbSNP
rs889919318 1283 dbSNP
rs1007145105 1292 dbSNP
rs142267856 1295 dbSNP
rs1273260589 1299 dbSNP
rs900851719 1308 dbSNP
rs553200841 1313 dbSNP
rs1296641101 1316 dbSNP
rs1025373331 1322 dbSNP
rs1381272297 1324 dbSNP
rs1483241359 1326 dbSNP
rs1157915625 1327 dbSNP
rs1182261271 1328 dbSNP
rs1301080902 1345 dbSNP
rs1382894238 1347 dbSNP
rs985948714 1355 dbSNP
rs1308842345 1370 dbSNP
rs1440955537 1372 dbSNP
rs544217748 1378 dbSNP
rs1388663861 1384 dbSNP
rs1168355514 1385 dbSNP
rs911306687 1394 dbSNP
rs941223736 1399 dbSNP
rs116072485 1403 dbSNP
rs1472158652 1408 dbSNP
rs1005224133 1412 dbSNP
rs1034187187 1417 dbSNP
rs533175093 1421 dbSNP
rs918397771 1423 dbSNP
rs1406711493 1426 dbSNP
rs929910267 1432 dbSNP
rs1056279030 1454 dbSNP
rs896144230 1456 dbSNP
rs1222941989 1474 dbSNP
rs546784778 1476 dbSNP
rs1323354620 1480 dbSNP
rs958758311 1491 dbSNP
rs1310449239 1494 dbSNP
rs947743993 1495 dbSNP
rs992771805 1498 dbSNP
rs1045252088 1505 dbSNP
rs1289099212 1509 dbSNP
rs917140834 1512 dbSNP
rs766972654 1513 dbSNP
rs1000388321 1517 dbSNP
rs879188859 1517 dbSNP
rs566595475 1521 dbSNP
rs1352020910 1523 dbSNP
rs759996630 1525 dbSNP
rs1163262955 1526 dbSNP
rs765493204 1529 dbSNP
rs1379239397 1533 dbSNP
rs891938347 1535 dbSNP
rs867575045 1537 dbSNP
rs1471359245 1543 dbSNP
rs1010500421 1544 dbSNP
rs775847285 1545 dbSNP
rs1447534780 1546 dbSNP
rs150814154 1547 dbSNP
rs1263480392 1548 dbSNP
rs1029875748 1551 dbSNP
rs924056978 1552 dbSNP
rs1317448231 1556 dbSNP
rs1268785407 1564 dbSNP
rs955597163 1565 dbSNP
rs763321425 1573 dbSNP
rs1387610828 1578 dbSNP
rs1370118399 1585 dbSNP
rs1292153941 1587 dbSNP
rs1457795565 1591 dbSNP
rs936748492 1602 dbSNP
rs1221141836 1607 dbSNP
rs1162082021 1610 dbSNP
rs1054240638 1613 dbSNP
rs1455162542 1614 dbSNP
rs1018800462 1620 dbSNP
rs1176277365 1621 dbSNP
rs1279841007 1623 dbSNP
rs1190419185 1633 dbSNP
rs529026724 1633 dbSNP
rs974100565 1634 dbSNP
rs190925953 1635 dbSNP
rs1206788466 1639 dbSNP
rs929774508 1655 dbSNP
rs1267609063 1657 dbSNP
rs1234183844 1662 dbSNP
rs545329047 1672 dbSNP
rs992078877 1677 dbSNP
rs568800353 1679 dbSNP
rs537843951 1688 dbSNP
rs1178788289 1689 dbSNP
rs1323118098 1697 dbSNP
rs1433560186 1708 dbSNP
rs947741573 1715 dbSNP
rs1044716198 1719 dbSNP
rs1467207864 1724 dbSNP
rs765848109 1724 dbSNP
rs770542475 1724 dbSNP
rs903491454 1724 dbSNP
rs1041330738 1725 dbSNP
rs139287566 1726 dbSNP
rs3214122 1726 dbSNP
rs770413271 1726 dbSNP
rs1052148009 1731 dbSNP
rs201438129 1731 dbSNP
rs901416530 1732 dbSNP
rs558169556 1736 dbSNP
rs993835342 1738 dbSNP
rs1261062530 1741 dbSNP
rs1201097805 1744 dbSNP
rs1484316500 1747 dbSNP
rs1254452407 1756 dbSNP
rs1425648656 1757 dbSNP
rs751697479 1759 dbSNP
rs1469056802 1760 dbSNP
rs1174204849 1772 dbSNP
rs1300307275 1778 dbSNP
rs1046721698 1780 dbSNP
rs772756713 1791 dbSNP
rs1005275028 1793 dbSNP
rs1034484014 1794 dbSNP
rs1397262380 1795 dbSNP
rs894337066 1804 dbSNP
rs12705421 1807 dbSNP
rs139256131 1819 dbSNP
rs1430026889 1838 dbSNP
rs1372134212 1839 dbSNP
rs749587686 1851 dbSNP
rs553918147 1857 dbSNP
rs767510025 1858 dbSNP
rs1438924171 1864 dbSNP
rs977303161 1865 dbSNP
rs1368982770 1867 dbSNP
rs750126808 1871 dbSNP
rs1425608409 1882 dbSNP
rs1018289785 1883 dbSNP
rs962652340 1886 dbSNP
rs1277145176 1889 dbSNP
rs1203434929 1894 dbSNP
rs974131592 1924 dbSNP
rs1285266287 1934 dbSNP
rs958001933 1940 dbSNP
rs1311425822 1951 dbSNP
rs989593572 1951 dbSNP
rs1409983141 1953 dbSNP
rs1351937334 1954 dbSNP
rs1348359591 1966 dbSNP
rs951253140 1971 dbSNP
rs1428833299 1979 dbSNP
rs911286227 1991 dbSNP
rs755906548 1995 dbSNP
rs917852085 2000 dbSNP
rs1164879889 2011 dbSNP
rs1456362305 2012 dbSNP
rs977323710 2034 dbSNP
rs1187331013 2041 dbSNP
rs1472991226 2043 dbSNP
rs922737524 2047 dbSNP
rs1271731694 2049 dbSNP
rs981065609 2051 dbSNP
rs1390670427 2056 dbSNP
rs1435527358 2060 dbSNP
rs1291064286 2064 dbSNP
rs1223347388 2066 dbSNP
rs930229278 2068 dbSNP
rs1212110382 2076 dbSNP
rs1354864971 2083 dbSNP
rs1047278018 2087 dbSNP
rs1228469602 2094 dbSNP
rs573873150 2095 dbSNP
rs779883428 2096 dbSNP
rs1306544522 2098 dbSNP
rs936282747 2104 dbSNP
rs1479991412 2105 dbSNP
rs1384952360 2110 dbSNP
rs753466203 2118 dbSNP
rs1159903095 2126 dbSNP
rs1052223525 2127 dbSNP
rs542787618 2128 dbSNP
rs150000325 2133 dbSNP
rs200378767 2138 dbSNP
rs913645808 2138 dbSNP
rs1014122357 2139 dbSNP
rs1024153628 2142 dbSNP
rs1450314022 2146 dbSNP
rs1167228773 2147 dbSNP
rs771316196 2151 dbSNP
rs1209956093 2152 dbSNP
rs576364542 2154 dbSNP
rs998790385 2157 dbSNP
rs1007151406 2158 dbSNP
rs754666959 2160 dbSNP
rs1324468149 2162 dbSNP
rs958055983 2164 dbSNP
rs1230783634 2171 dbSNP
rs1370028438 2175 dbSNP
rs1040320720 2176 dbSNP
rs1403325508 2180 dbSNP
rs1318626609 2183 dbSNP
rs1400280486 2185 dbSNP
rs1426117005 2187 dbSNP
rs80083665 2189 dbSNP
rs1018401049 2192 dbSNP
rs564390855 2195 dbSNP
rs542614060 2198 dbSNP
rs1189730956 2206 dbSNP
rs182756231 2220 dbSNP
rs930114556 2224 dbSNP
rs1214445621 2225 dbSNP
rs1442563781 2226 dbSNP
rs1280256663 2230 dbSNP
rs1211040786 2232 dbSNP
rs1014062431 2244 dbSNP
rs983022133 2245 dbSNP
rs560423399 2248 dbSNP
rs1298098131 2258 dbSNP
rs1230433638 2262 dbSNP
rs1490100735 2266 dbSNP
rs980713525 2267 dbSNP
rs867507904 2277 dbSNP
rs1265115106 2279 dbSNP
rs1488471297 2280 dbSNP
rs1192405888 2281 dbSNP
rs529078397 2285 dbSNP
rs1433128585 2301 dbSNP
rs1371206946 2302 dbSNP
rs1473818899 2303 dbSNP
rs925188307 2305 dbSNP
rs1163974646 2311 dbSNP
rs1451787219 2315 dbSNP
rs771287883 2325 dbSNP
rs910117535 2330 dbSNP
rs941073630 2331 dbSNP
rs1238720977 2333 dbSNP
rs561324884 2339 dbSNP
rs1423021048 2348 dbSNP
rs781726772 2350 dbSNP
rs1207532286 2354 dbSNP
rs1278318920 2361 dbSNP
rs1361597885 2363 dbSNP
rs746448234 2364 dbSNP
rs536401649 2368 dbSNP
rs1339883769 2371 dbSNP
rs775704949 2388 dbSNP
rs933071027 2389 dbSNP
rs568887428 2399 dbSNP
rs1045484184 2400 dbSNP
rs942860027 2400 dbSNP
rs903033424 2404 dbSNP
rs1246145351 2405 dbSNP
rs770266897 2406 dbSNP
rs776041592 2407 dbSNP
rs544981301 2408 dbSNP
rs998675900 2409 dbSNP
rs1054399155 2411 dbSNP
rs1353169385 2423 dbSNP
rs1170298861 2426 dbSNP
rs1406488168 2427 dbSNP
rs893043644 2429 dbSNP
rs531216089 2436 dbSNP
rs1474627660 2452 dbSNP
rs1018692302 2458 dbSNP
rs1183948563 2460 dbSNP
rs1252081765 2460 dbSNP
rs995492112 2460 dbSNP
rs1250580471 2465 dbSNP
rs1287652703 2466 dbSNP
rs964052614 2466 dbSNP
rs747237073 2469 dbSNP
rs998689285 2471 dbSNP
rs1323449355 2477 dbSNP
rs1351143736 2479 dbSNP
rs1231527902 2480 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gaccucucucUCUCCGAGUCa 5'
                    || ||||||| 
Target 5' -------auaAGUGGCUCAGu 3'
1 - 14
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000440859.3 | 3UTR | AUAAGUGGCUCAGUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000440859.3 | 3UTR | AUAAGUGGCUCAGUUGAGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
77 hsa-miR-6751-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT130738 GATAD2B GATA zinc finger domain containing 2B 2 4
MIRT134924 CCND2 cyclin D2 2 2
MIRT273034 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT276645 KPNA3 karyopherin subunit alpha 3 2 6
MIRT446531 OAS2 2'-5'-oligoadenylate synthetase 2 2 2
MIRT456268 TDRKH tudor and KH domain containing 2 12
MIRT494454 BTG2 BTG anti-proliferation factor 2 2 2
MIRT494965 USP46 ubiquitin specific peptidase 46 2 2
MIRT496689 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT496697 RGS11 regulator of G protein signaling 11 2 2
MIRT504376 IRF4 interferon regulatory factor 4 2 6
MIRT510980 PFN2 profilin 2 2 6
MIRT512548 MFN2 mitofusin 2 2 6
MIRT513639 TP53INP2 tumor protein p53 inducible nuclear protein 2 2 2
MIRT514016 CAMSAP1 calmodulin regulated spectrin associated protein 1 2 4
MIRT514074 MTRNR2L6 MT-RNR2-like 6 2 2
MIRT515300 C15orf38-AP3S2 C15orf38-AP3S2 readthrough 2 4
MIRT517285 AP3S2 adaptor related protein complex 3 sigma 2 subunit 2 4
MIRT519075 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT520779 TCF23 transcription factor 23 2 2
MIRT522485 MFSD9 major facilitator superfamily domain containing 9 2 2
MIRT528856 PKP1 plakophilin 1 2 2
MIRT529081 PATE2 prostate and testis expressed 2 2 2
MIRT531209 PLA2G4D phospholipase A2 group IVD 2 2
MIRT533988 TAB3 TGF-beta activated kinase 1 and MAP3K7 binding protein 3 2 2
MIRT537024 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 2
MIRT537498 FAM168B family with sequence similarity 168 member B 2 2
MIRT553125 UBE2Z ubiquitin conjugating enzyme E2 Z 2 2
MIRT555591 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT556370 LUZP1 leucine zipper protein 1 2 2
MIRT569745 C2orf71 chromosome 2 open reading frame 71 2 2
MIRT570149 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT571243 FADS6 fatty acid desaturase 6 2 2
MIRT573065 TRIB1 tribbles pseudokinase 1 2 2
MIRT575533 Map4 microtubule-associated protein 4 2 2
MIRT575777 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT616558 ZNF512B zinc finger protein 512B 2 2
MIRT624851 ABI2 abl interactor 2 2 2
MIRT630078 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT631479 KLHL21 kelch like family member 21 2 2
MIRT632173 CCL22 C-C motif chemokine ligand 22 2 2
MIRT638397 QSOX2 quiescin sulfhydryl oxidase 2 2 4
MIRT641192 ISG20L2 interferon stimulated exonuclease gene 20 like 2 2 2
MIRT642562 TEX9 testis expressed 9 2 2
MIRT642935 KRTAP5-9 keratin associated protein 5-9 2 2
MIRT649703 ZNF175 zinc finger protein 175 2 2
MIRT650437 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT652113 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT652273 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT655215 PFKM phosphofructokinase, muscle 2 2
MIRT682778 ZNF852 zinc finger protein 852 2 2
MIRT683001 MUC20 mucin 20, cell surface associated 2 2
MIRT684320 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT689435 CYB561 cytochrome b561 2 2
MIRT693847 ZNF107 zinc finger protein 107 2 2
MIRT696715 TAX1BP3 Tax1 binding protein 3 2 2
MIRT698597 TEX261 testis expressed 261 2 2
MIRT699973 RREB1 ras responsive element binding protein 1 2 2
MIRT703310 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 2
MIRT706796 RAI1 retinoic acid induced 1 2 2
MIRT709004 CD109 CD109 molecule 2 2
MIRT709181 TBC1D10B TBC1 domain family member 10B 2 2
MIRT709835 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT711627 CORO1C coronin 1C 2 2
MIRT712634 RNF103-CHMP3 RNF103-CHMP3 readthrough 2 2
MIRT713694 CYB5R4 cytochrome b5 reductase 4 2 2
MIRT713752 SLC9A8 solute carrier family 9 member A8 2 2
MIRT714908 CHMP3 charged multivesicular body protein 3 2 2
MIRT716371 CBLL1 Cbl proto-oncogene like 1 2 2
MIRT718303 XPOT exportin for tRNA 2 2
MIRT718713 ANKRD18A ankyrin repeat domain 18A 2 2
MIRT718740 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT719441 NPTX2 neuronal pentraxin 2 2 2
MIRT720896 OTUD4 OTU deubiquitinase 4 2 2
MIRT722448 RXFP4 relaxin/insulin like family peptide receptor 4 2 2
MIRT723882 VKORC1 vitamin K epoxide reductase complex subunit 1 2 2
MIRT724586 SYNJ2BP synaptojanin 2 binding protein 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6751 Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780)
hsa-mir-6751 Triptolide 107985 NSC163062 sensitive Low Ovarian Cancer cell line (A2780)

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