pre-miRNA Information
pre-miRNA hsa-mir-2355   
Genomic Coordinates chr2: 207109987 - 207110073
Description Homo sapiens miR-2355 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-2355-5p
Sequence 11| AUCCCCAGAUACAAUGGACAA |31
Evidence Experimental
Experiments SOLiD
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 2 - 207110063 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1268296297 4 dbSNP
rs1361046879 5 dbSNP
rs1219551997 6 dbSNP
rs1295756820 12 dbSNP
rs1345273529 15 dbSNP
rs977145706 15 dbSNP
rs1209629984 20 dbSNP
rs759940260 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MFSD12   
Synonyms C19orf28, PP3501
Description major facilitator superfamily domain containing 12
Transcript NM_174983   
Expression
Putative miRNA Targets on MFSD12
3'UTR of MFSD12
(miRNA target sites are highlighted)
>MFSD12|NM_174983|3'UTR
   1 CTCCTGACAGCCTCCTGCACCTGTGCAAGGGAACTGTGGGGACGCACGAGGATGCCCCCCAGGGCCTTGGGGAAAAGCCC
  81 CCACTGCCCCTCACTCTTCTCTGGACCCCCACCCTCCATCCTCACCCAGCTCCCGGGGGTGGGGTCGGGTGAGGGCAGCA
 161 GGGATGCCCGCCAGGGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTC
 241 TGGAGGATTTGGGGTGCCCCTCTCGGCAGGGAACAGGAAGTAGGAATCCCAGAAGGGTCTGGGGGAACCCTAACCCTGAG
 321 CTCAGTCCAGTTCACCCCTCACCTCCAGCCTGGGGGTCTCCAGACACTGCCAGGGCCCCCTCAGGACGGCTGGAGCCTGG
 401 AGGAGACAGCCACGGGGTGGTGGGCTGGGCCTGGACCCCACCGTGGTGGGCAGCAGGGCTGCCCGGCAGGCTTGGTGGAC
 481 TCTGCTGGCAGCAAATAAAGAGATGACGGCAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aacaGGU-AACAUAGACCCCUa 5'
              |||   | :|||||||: 
Target 5' aatcCCAGAAGGGTCTGGGGGa 3'
285 - 306 133.00 -18.20
2
miRNA  3' aacAGGUAACAUAGACCCCUa 5'
             ||||    : ||||||: 
Target 5' accTCCA----GCCTGGGGGt 3'
341 - 357 128.00 -15.50
3
miRNA  3' aacagguaacauaGACCCCUa 5'
                       :|||||| 
Target 5' gccccccagggccTTGGGGAa 3'
54 - 74 124.00 -14.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30147373 6 COSMIC
COSN30132014 21 COSMIC
COSN31605926 47 COSMIC
COSN30457743 57 COSMIC
COSN30456379 81 COSMIC
COSN30464998 82 COSMIC
COSN30161831 92 COSMIC
COSN30103439 125 COSMIC
COSN31961481 147 COSMIC
COSN29067195 413 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1353802333 1 dbSNP
rs375906201 3 dbSNP
rs372334992 4 dbSNP
rs866791194 5 dbSNP
rs1384310314 6 dbSNP
rs199970491 7 dbSNP
rs1247031814 9 dbSNP
rs1008849333 10 dbSNP
rs1355788532 11 dbSNP
rs566821469 12 dbSNP
rs756376536 15 dbSNP
rs1385398265 17 dbSNP
rs1053964334 18 dbSNP
rs752459575 19 dbSNP
rs368927640 21 dbSNP
rs1426649875 22 dbSNP
rs1424055691 23 dbSNP
rs145238796 25 dbSNP
rs371500547 26 dbSNP
rs1257376682 28 dbSNP
rs751396788 33 dbSNP
rs368063455 35 dbSNP
rs750015368 36 dbSNP
rs944078340 38 dbSNP
rs751360663 39 dbSNP
rs1288687071 41 dbSNP
rs150041717 43 dbSNP
rs372036903 44 dbSNP
rs759947081 45 dbSNP
rs368629390 47 dbSNP
rs763675940 47 dbSNP
rs372859245 48 dbSNP
rs1214564060 49 dbSNP
rs1340702525 50 dbSNP
rs371439443 51 dbSNP
rs546272257 53 dbSNP
rs577318786 55 dbSNP
rs1182276363 56 dbSNP
rs907646758 58 dbSNP
rs1414781593 62 dbSNP
rs1461803802 63 dbSNP
rs983587044 64 dbSNP
rs1388780376 66 dbSNP
rs1170858921 67 dbSNP
rs114947471 74 dbSNP
rs1025074031 75 dbSNP
rs533937059 78 dbSNP
rs72976620 80 dbSNP
rs1309965796 81 dbSNP
rs1348764416 83 dbSNP
rs1032514657 84 dbSNP
rs1488315796 92 dbSNP
rs1306287208 93 dbSNP
rs965627064 96 dbSNP
rs143698298 99 dbSNP
rs1268333065 103 dbSNP
rs567176012 103 dbSNP
rs1205190580 105 dbSNP
rs1008965416 107 dbSNP
rs376212067 109 dbSNP
rs1177128670 111 dbSNP
rs1268733246 111 dbSNP
rs568680235 118 dbSNP
rs1272274918 127 dbSNP
rs1197201842 128 dbSNP
rs181719259 130 dbSNP
rs1342824871 134 dbSNP
rs532040929 135 dbSNP
rs1461598082 136 dbSNP
rs1042537554 140 dbSNP
rs1230460646 141 dbSNP
rs1388256538 143 dbSNP
rs948915039 145 dbSNP
rs1332256993 146 dbSNP
rs566222618 147 dbSNP
rs1276415349 148 dbSNP
rs896022684 154 dbSNP
rs546623039 156 dbSNP
rs1000999840 157 dbSNP
rs1368289735 157 dbSNP
rs190163747 161 dbSNP
rs908178270 162 dbSNP
rs185742967 165 dbSNP
rs1050194892 167 dbSNP
rs546857114 169 dbSNP
rs562440397 170 dbSNP
rs1375396116 173 dbSNP
rs542124351 180 dbSNP
rs1479050062 181 dbSNP
rs764343302 182 dbSNP
rs1037569674 183 dbSNP
rs1435612849 186 dbSNP
rs1299280418 187 dbSNP
rs941890438 189 dbSNP
rs1378346326 190 dbSNP
rs759299630 192 dbSNP
rs1471757635 193 dbSNP
rs746675972 193 dbSNP
rs1254197968 198 dbSNP
rs531955883 199 dbSNP
rs563029664 201 dbSNP
rs1277841642 207 dbSNP
rs983276411 209 dbSNP
rs546409398 212 dbSNP
rs3194440 215 dbSNP
rs1246383992 219 dbSNP
rs1347023829 219 dbSNP
rs1019429973 220 dbSNP
rs1256122359 222 dbSNP
rs1416011543 223 dbSNP
rs1162685320 227 dbSNP
rs1227209992 228 dbSNP
rs987493386 228 dbSNP
rs1348271131 232 dbSNP
rs1289776682 237 dbSNP
rs1343269208 238 dbSNP
rs774149950 242 dbSNP
rs1303140327 247 dbSNP
rs1230937461 256 dbSNP
rs1031599915 258 dbSNP
rs1410841449 259 dbSNP
rs1330466260 261 dbSNP
rs766071083 263 dbSNP
rs139334559 264 dbSNP
rs1446825831 265 dbSNP
rs554285356 265 dbSNP
rs375047664 267 dbSNP
rs1187310259 270 dbSNP
rs752124408 271 dbSNP
rs990521759 274 dbSNP
rs1472888732 275 dbSNP
rs1057331382 276 dbSNP
rs959017540 279 dbSNP
rs1032622625 280 dbSNP
rs1001138191 281 dbSNP
rs966960599 283 dbSNP
rs1021551463 286 dbSNP
rs1412339100 297 dbSNP
rs1455663777 297 dbSNP
rs1311772434 301 dbSNP
rs1008358184 303 dbSNP
rs762572163 304 dbSNP
rs1350627111 308 dbSNP
rs1048657039 310 dbSNP
rs930985493 314 dbSNP
rs540654467 316 dbSNP
rs891245341 318 dbSNP
rs1210187599 319 dbSNP
rs1049793044 321 dbSNP
rs574705954 330 dbSNP
rs1231122393 335 dbSNP
rs996833497 336 dbSNP
rs943976390 338 dbSNP
rs898484676 340 dbSNP
rs1038309860 342 dbSNP
rs912366269 345 dbSNP
rs866916334 346 dbSNP
rs907749931 347 dbSNP
rs554867390 349 dbSNP
rs1327369874 352 dbSNP
rs1431164651 352 dbSNP
rs1265635498 357 dbSNP
rs956085146 357 dbSNP
rs1185117986 360 dbSNP
rs1276992897 361 dbSNP
rs1048021013 362 dbSNP
rs533605727 365 dbSNP
rs1266553425 366 dbSNP
rs1275694926 370 dbSNP
rs949242520 371 dbSNP
rs1279187599 372 dbSNP
rs1031715995 373 dbSNP
rs917691687 376 dbSNP
rs1222280174 377 dbSNP
rs1326386550 378 dbSNP
rs1254617017 379 dbSNP
rs990554229 382 dbSNP
rs968737104 383 dbSNP
rs1192602262 385 dbSNP
rs772806295 387 dbSNP
rs376313620 388 dbSNP
rs1004379840 395 dbSNP
rs887306733 399 dbSNP
rs1392723475 405 dbSNP
rs1298524759 407 dbSNP
rs1367661030 411 dbSNP
rs1225270818 412 dbSNP
rs558373978 413 dbSNP
rs182359182 414 dbSNP
rs1450587437 415 dbSNP
rs1275035563 418 dbSNP
rs1341616548 420 dbSNP
rs1021204055 422 dbSNP
rs1320402486 424 dbSNP
rs987410123 427 dbSNP
rs1391017312 431 dbSNP
rs1448388894 435 dbSNP
rs899992363 436 dbSNP
rs1053873 440 dbSNP
rs1371963392 441 dbSNP
rs768336496 442 dbSNP
rs1028388916 443 dbSNP
rs566259855 445 dbSNP
rs546364518 447 dbSNP
rs1052342953 451 dbSNP
rs1391349988 452 dbSNP
rs529708629 453 dbSNP
rs925138914 456 dbSNP
rs1341125490 458 dbSNP
rs1450310977 459 dbSNP
rs1294979982 462 dbSNP
rs1332626165 462 dbSNP
rs1473625794 463 dbSNP
rs11555326 464 dbSNP
rs1187780317 465 dbSNP
rs969228739 468 dbSNP
rs1463486959 470 dbSNP
rs780272282 477 dbSNP
rs915877089 479 dbSNP
rs991900183 479 dbSNP
rs1004177233 483 dbSNP
rs1475154847 484 dbSNP
rs1160607467 485 dbSNP
rs886392553 487 dbSNP
rs1208784802 489 dbSNP
rs372650934 492 dbSNP
rs949270549 494 dbSNP
rs150907742 497 dbSNP
rs1054938186 499 dbSNP
rs1027585397 500 dbSNP
rs759002191 500 dbSNP
rs1230401691 502 dbSNP
rs937752991 503 dbSNP
rs1337252782 505 dbSNP
rs563170969 507 dbSNP
rs552831807 508 dbSNP
rs1345311478 510 dbSNP
rs945054163 512 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aacagguaaCAUAGACCCcua 5'
                   | | |||||   
Target 5' -ggggagggGGACCUGGG--- 3'
1 - 17
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000398558.4 | 3UTR | GGGGAGGGGGACCUGGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
KICH 0.535 0 0.456 0.01 25 Click to see details
BLCA 0.408 0.05 0.370 0.07 18 Click to see details
CHOL -0.412 0.14 -0.367 0.17 9 Click to see details
CESC 0.845 0.18 0.500 0.33 3 Click to see details
LUAD 0.275 0.19 0.000 0.5 12 Click to see details
LIHC 0.116 0.21 0.164 0.13 49 Click to see details
KIRP 0.144 0.22 0.163 0.19 32 Click to see details
THCA 0.103 0.22 0.108 0.21 59 Click to see details
STAD 0.135 0.23 0.151 0.2 32 Click to see details
UCEC -0.166 0.25 -0.107 0.33 19 Click to see details
PAAD -0.467 0.27 -0.600 0.2 4 Click to see details
KIRC -0.069 0.29 -0.034 0.39 68 Click to see details
BRCA 0.041 0.36 0.035 0.38 84 Click to see details
HNSC 0.05 0.38 -0.018 0.45 42 Click to see details
PCPG -0.351 0.39 -0.500 0.33 3 Click to see details
PRAD -0.04 0.39 0.001 0.5 50 Click to see details
LUSC -0.031 0.43 -0.106 0.26 38 Click to see details
ESCA -0.036 0.46 -0.164 0.31 11 Click to see details
ESCA -0.036 0.46 -0.164 0.31 11 Click to see details
164 hsa-miR-2355-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT190653 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT286477 TAOK1 TAO kinase 1 2 4
MIRT318993 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT345622 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT442513 SYT7 synaptotagmin 7 2 4
MIRT444247 CTNND1 catenin delta 1 2 2
MIRT444780 ECE1 endothelin converting enzyme 1 2 2
MIRT456525 TMEM63A transmembrane protein 63A 2 2
MIRT468960 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469834 R3HDM4 R3H domain containing 4 2 2
MIRT470027 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT471167 PHB2 prohibitin 2 2 2
MIRT475819 HDGF heparin binding growth factor 2 4
MIRT479389 CDKN1B cyclin dependent kinase inhibitor 1B 2 6
MIRT481747 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT485220 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT487259 CCNF cyclin F 2 2
MIRT489971 MCC mutated in colorectal cancers 2 4
MIRT491399 C1D C1D nuclear receptor corepressor 2 2
MIRT494959 CCDC144A coiled-coil domain containing 144A 2 4
MIRT494979 PPP5D1 PPP5 tetratricopeptide repeat domain containing 1 2 2
MIRT495225 CHST14 carbohydrate sulfotransferase 14 2 2
MIRT496550 TBX15 T-box 15 2 2
MIRT501612 PISD phosphatidylserine decarboxylase 2 2
MIRT509393 TRIM24 tripartite motif containing 24 2 2
MIRT519616 ZNF788 zinc finger family member 788 2 4
MIRT519738 ZNF394 zinc finger protein 394 2 4
MIRT521230 SAR1A secretion associated Ras related GTPase 1A 2 4
MIRT521801 POM121C POM121 transmembrane nucleoporin C 2 2
MIRT526233 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT526932 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT529189 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT529329 ZNF649 zinc finger protein 649 2 2
MIRT529698 MRPL30 mitochondrial ribosomal protein L30 2 2
MIRT529921 TOP1MT DNA topoisomerase I mitochondrial 2 2
MIRT530032 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT530898 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT531621 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT533132 XIAP X-linked inhibitor of apoptosis 2 2
MIRT533210 WAPAL WAPL cohesin release factor 2 2
MIRT534058 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT535487 PARVB parvin beta 2 2
MIRT536749 HOXD9 homeobox D9 2 2
MIRT551456 CARKD NAD(P)HX dehydratase 2 2
MIRT551858 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT552095 FAM8A1 family with sequence similarity 8 member A1 2 2
MIRT552332 ZNF704 zinc finger protein 704 2 2
MIRT552549 ZFP36L2 ZFP36 ring finger protein like 2 2 2
MIRT561505 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT562702 ZNF415 zinc finger protein 415 2 2
MIRT563052 ZNF138 zinc finger protein 138 2 2
MIRT564592 ZNF791 zinc finger protein 791 2 2
MIRT566422 PIGA phosphatidylinositol glycan anchor biosynthesis class A 2 2
MIRT570176 RCBTB1 RCC1 and BTB domain containing protein 1 2 2
MIRT570866 ZNF525 zinc finger protein 525 2 2
MIRT570875 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571517 ZNF625 zinc finger protein 625 2 2
MIRT572551 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT610894 HINFP histone H4 transcription factor 2 2
MIRT611037 PTGES prostaglandin E synthase 2 2
MIRT611479 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT612419 SP1 Sp1 transcription factor 2 2
MIRT614478 FRMPD3 FERM and PDZ domain containing 3 2 2
MIRT616318 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT616929 ZNF638 zinc finger protein 638 2 2
MIRT618131 GABARAPL3 GABA type A receptor associated protein like 3 pseudogene 2 2
MIRT618452 ZFP30 ZFP30 zinc finger protein 2 4
MIRT620671 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT620713 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT621126 EMC7 ER membrane protein complex subunit 7 2 4
MIRT621443 TOMM22 translocase of outer mitochondrial membrane 22 2 2
MIRT623491 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT623783 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT623918 FNBP1L formin binding protein 1 like 2 2
MIRT625723 CXorf38 chromosome X open reading frame 38 2 2
MIRT625778 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT626940 TTR transthyretin 2 2
MIRT627357 TSC22D2 TSC22 domain family member 2 2 2
MIRT632078 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT633361 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT639793 MVK mevalonate kinase 2 2
MIRT643761 NAGK N-acetylglucosamine kinase 2 2
MIRT644358 NDUFAF6 NADH:ubiquinone oxidoreductase complex assembly factor 6 2 2
MIRT645558 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT646588 ANKRD36 ankyrin repeat domain 36 2 2
MIRT646631 SLC25A46 solute carrier family 25 member 46 2 2
MIRT648066 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT648142 SUCLG2 succinate-CoA ligase GDP-forming beta subunit 2 2
MIRT648416 MYOZ3 myozenin 3 2 2
MIRT649218 AMMECR1L AMMECR1 like 2 2
MIRT649772 MRPS27 mitochondrial ribosomal protein S27 2 4
MIRT650510 UFM1 ubiquitin fold modifier 1 2 2
MIRT651007 ZNF740 zinc finger protein 740 2 2
MIRT651524 WNT2B Wnt family member 2B 2 2
MIRT652014 TTYH3 tweety family member 3 2 2
MIRT652513 TMEM109 transmembrane protein 109 2 2
MIRT652686 THUMPD3 THUMP domain containing 3 2 2
MIRT652772 TENM3 teneurin transmembrane protein 3 2 2
MIRT653160 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT653765 SIX5 SIX homeobox 5 2 2
MIRT653792 SIRPA signal regulatory protein alpha 2 2
MIRT655649 OAZ2 ornithine decarboxylase antizyme 2 2 2
MIRT656263 MEX3A mex-3 RNA binding family member A 2 2
MIRT657044 KCNH6 potassium voltage-gated channel subfamily H member 6 2 2
MIRT657375 HMGA1 high mobility group AT-hook 1 2 2
MIRT657532 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT657542 GSTO2 glutathione S-transferase omega 2 2 2
MIRT657828 GJD3 gap junction protein delta 3 2 2
MIRT658946 DOK6 docking protein 6 2 2
MIRT660363 BACH2 BTB domain and CNC homolog 2 2 2
MIRT660406 ATXN7L3 ataxin 7 like 3 2 2
MIRT660948 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT661031 AAK1 AP2 associated kinase 1 2 2
MIRT662435 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT668419 FAM217B family with sequence similarity 217 member B 2 2
MIRT669332 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT676105 CLUAP1 clusterin associated protein 1 2 2
MIRT677084 SMIM15 small integral membrane protein 15 2 2
MIRT677127 OGFOD3 2-oxoglutarate and iron dependent oxygenase domain containing 3 2 2
MIRT678001 CPM carboxypeptidase M 2 2
MIRT678531 TMEM78 transmembrane protein 78 2 2
MIRT680000 ZNF860 zinc finger protein 860 2 2
MIRT680098 PXMP4 peroxisomal membrane protein 4 2 2
MIRT686795 SOX12 SRY-box 12 2 2
MIRT698887 SPTBN2 spectrin beta, non-erythrocytic 2 2 2
MIRT699371 SLC30A6 solute carrier family 30 member 6 2 2
MIRT702005 MIDN midnolin 2 2
MIRT708101 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT709563 GYG2 glycogenin 2 2 2
MIRT710559 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT710585 CDCA4 cell division cycle associated 4 2 2
MIRT710873 NT5DC1 5'-nucleotidase domain containing 1 2 2
MIRT711876 VASP vasodilator stimulated phosphoprotein 2 2
MIRT712226 RIMS3 regulating synaptic membrane exocytosis 3 2 2
MIRT713211 FAM13A family with sequence similarity 13 member A 2 2
MIRT713261 GPR55 G protein-coupled receptor 55 2 2
MIRT713327 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT713889 RNF19B ring finger protein 19B 2 2
MIRT714015 UBAP2L ubiquitin associated protein 2 like 2 2
MIRT714202 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT714717 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714748 ZNF385D zinc finger protein 385D 2 2
MIRT714806 ARHGEF19 Rho guanine nucleotide exchange factor 19 2 2
MIRT714852 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715717 MRPL4 mitochondrial ribosomal protein L4 2 2
MIRT715852 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT716853 MFSD12 major facilitator superfamily domain containing 12 2 2
MIRT717134 EBPL emopamil binding protein like 2 2
MIRT717248 TMEM246 transmembrane protein 246 2 2
MIRT717997 ZNF79 zinc finger protein 79 2 2
MIRT718341 PURA purine rich element binding protein A 2 2
MIRT719587 TFCP2L1 transcription factor CP2 like 1 2 2
MIRT720520 PTGR2 prostaglandin reductase 2 2 2
MIRT720671 SLC39A13 solute carrier family 39 member 13 2 2
MIRT721213 DCLK3 doublecortin like kinase 3 2 2
MIRT721757 INF2 inverted formin, FH2 and WH2 domain containing 2 2
MIRT721826 POU6F1 POU class 6 homeobox 1 2 2
MIRT722091 SUSD1 sushi domain containing 1 2 2
MIRT722275 LURAP1 leucine rich adaptor protein 1 2 2
MIRT722802 ARHGAP19 Rho GTPase activating protein 19 2 2
MIRT722866 FAM212B family with sequence similarity 212 member B 2 2
MIRT723113 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT724378 NEK8 NIMA related kinase 8 2 2
MIRT732775 PYCR1 pyrroline-5-carboxylate reductase 1 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2355 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Temozolomide 5394 NSC362856 approved resistant High Glioma tissue
hsa-miR-2355-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-2355-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-2355-5p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2355-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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