pre-miRNA Information
pre-miRNA hsa-mir-1245a   
Genomic Coordinates chr2: 188978092 - 188978161
Description Homo sapiens miR-1245a stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-1245a
Sequence 45| AAGUGAUCUAAAGGCCUACAU |65
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN31562560 15 COSMIC
COSN26581044 19 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906938680 2 dbSNP
rs1159117523 3 dbSNP
rs780486044 6 dbSNP
rs771479866 17 dbSNP
rs1002976932 18 dbSNP
rs1428029219 19 dbSNP
Putative Targets

Gene Information
Gene Symbol PDE4DIP   
Synonyms CMYA2, MMGL
Description phosphodiesterase 4D interacting protein
Transcript NM_001002811   
Other Transcripts NM_001002810 , NM_001002812 , NM_014644 , NM_022359   
Expression
Putative miRNA Targets on PDE4DIP
3'UTR of PDE4DIP
(miRNA target sites are highlighted)
>PDE4DIP|NM_001002811|3'UTR
   1 CTTCAGAAGCATTTTTACTTGCAAGACGATGGACACATTCCCCTTGGGCTTTTTGTAACTGAAACGCACCACAGAAGACA
  81 GGGAGTCATCGAAGGGCTGCTCGGGGAGGTGGCAGGGCGGAGGACCTGCTTGGGAAGAAACTCCAAGAAGATTGGAATGC
 161 TTCCAAAGCAAGAATCTTTCTCAGTGAAATCTCATTATACAAAGAGAACCTTATGCAACCTGACAAACCACTGAGGTCAT
 241 GGTGACTCAGTGATCAGCAGATGGTACTTCAACAGCAATCCCCTGTCAAACCTCAGAACTTGAGGCTGAAACATTGCTTC
 321 CACCCACCATCAGTGAAGATGTAACTAGCATGTTACAAGAGTGAATAATCTGGACTTCAGAGATTAAGTCACCAATAGTG
 401 ATCTCACAAGCACTCACCGGAACTCCTATAATGTCTCCACTTTGTCCATGCCATTTAGCAATCTCATCTCCTAAATGGAC
 481 TGTGCCTATGATTCTTAAGGAGAAAGTGAATCATTGGTAGATATCCTGCACAAGCAGCTGGACTTTCCAGTAATAGCTTT
 561 CTTGGGGCTATTAGGAAAATTAAACAAGAAATGAGGCTTTCTGGGTCTGCCTGTATGTCTTCTGCATAAGACAAAGAAGA
 641 GACATCGAATCAACCAATAAGAAGAGCCCAAATAAGCATCCTCAAATCTTTTGGGATTTGGCACTTGGGGACATGAGTAG
 721 TTGTCTGGGATACGTCATATTCTCAACAGTTTCTTTGTAGTAGTAGGATCACCTTCTTATAATAGGATCACCTTCTTGTT
 801 GCTATAGCTGTACCCGACCTTCCCTTCTCCCTTGAGTGCTTGCATGAGCTCCACTTTTCCTTTTGCTTGAACAGCTTCTC
 881 CTGAGTCCTCCTTACCGATGGTTGTGACTTTAATTATATACATCTCTGTCCCTCCAGACAGATCCCTCTGTCCTCACTCT
 961 CTGATTTCATTGAGGATCTTGGGTGAGAGAGAGGGACCTGCAGGATGAACAAATGTCTACTCTAAGACAGCTAGATTGGG
1041 AGGTTGGCTGGTCACTGATGGTTATAATGACTGTGGGACAGGATTAACTTCAGAATAAATGAACAGGAGACACAGATATG
1121 AAGAAAGTTTCTGATTGATATGGTCTGAAGTACTCCTGGTATTGCAAGTCATTTGCTCTAATTCTCAATTGTAGGCAAAC
1201 TGATTTGTAAATTTGCTTCTTCAGCCTTCTTTCCTGTAGCCTAGCATGGAGAATCTGACCAGACCCCATTTTGAGAAGGT
1281 CAGCCTACACTGGAATGAACTTTTTACATTAGGGCATTTGTATTTCCCTCACAATACTTGCCACATTACTTGGCATAGGA
1361 GAGATGCTTAGTGTAATTATAAGTTAACAAGCCTTTGGATCAGGGCTTGACTCATGATAGACAAAGTATATGCCTGCTGG
1441 ATGGAAGAATCTCTTGGGCGAGCACCATTTTTCTTTCCATCACCTTTCCTTGAAAATATATCTTCAGCTTTGGGTAGGAG
1521 GAATCTTGGTGTATGAAATCATTGCAAATTTACTTCATCTTTTCTGGAGTTTGAAGTTGTGACTCTCCTGCTACCAATTA
1601 AATAAAGCTTACTTTGCCATAACAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uacaUCCGGAAAUCUAGUgaa 5'
              | ||||||:|||||   
Target 5' taacAAGCCTTTGGATCAggg 3'
1385 - 1405 133.00 -15.82
2
miRNA  3' uaCAUCC----GGAA-------AU-CUAGUGaa 5'
            |||||    ||||       || ||||||  
Target 5' taGTAGGATCACCTTCTTATAATAGGATCACct 3'
761 - 793 133.00 -12.80
3
miRNA  3' uaCAUCCGGAAAUCUAGUGAa 5'
            || |||:    |:||||| 
Target 5' agGTTGGCT----GGTCACTg 3'
1041 - 1057 133.00 -12.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM6570331 1 COSMIC
COSN31495874 5 COSMIC
COSN30176496 12 COSMIC
COSN20064692 28 COSMIC
COSN13464235 29 COSMIC
COSN28724125 43 COSMIC
COSN30458641 44 COSMIC
COSN30138808 51 COSMIC
COSN20073423 59 COSMIC
COSN31539717 62 COSMIC
COSN31482332 67 COSMIC
COSN30450723 91 COSMIC
COSN31480955 104 COSMIC
COSN31508277 117 COSMIC
COSN13464231 119 COSMIC
COSN19695599 126 COSMIC
COSN31662930 144 COSMIC
COSN31605009 162 COSMIC
COSN31598975 173 COSMIC
COSN19749063 175 COSMIC
COSN31558799 187 COSMIC
COSN30620615 192 COSMIC
COSN31532370 252 COSMIC
COSN24195123 475 COSMIC
COSN6001673 591 COSMIC
COSN28285701 734 COSMIC
COSN16132190 817 COSMIC
COSN28852166 1068 COSMIC
COSN22069149 1141 COSMIC
COSN16406831 1223 COSMIC
COSN4708504 1419 COSMIC
COSN20074100 1451 COSMIC
COSN8635836 1501 COSMIC
COSN31576194 1558 COSMIC
COSN20090318 1560 COSMIC
COSN31569868 1569 COSMIC
COSN30544812 1589 COSMIC
COSN15871396 1601 COSMIC
COSN31570335 1602 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1437449961 6 dbSNP
rs781825736 13 dbSNP
rs1386642633 19 dbSNP
rs782443469 28 dbSNP
rs368616713 29 dbSNP
rs1370009493 33 dbSNP
rs1162480628 34 dbSNP
rs782801349 39 dbSNP
rs782140869 41 dbSNP
rs781845004 43 dbSNP
rs782754689 47 dbSNP
rs782073996 50 dbSNP
rs1390774777 66 dbSNP
rs1189935913 67 dbSNP
rs1260539148 80 dbSNP
rs1210090141 83 dbSNP
rs587718893 89 dbSNP
rs781821597 90 dbSNP
rs587655467 91 dbSNP
rs1267578188 92 dbSNP
rs587609491 95 dbSNP
rs1359338934 98 dbSNP
rs1298995852 104 dbSNP
rs1230626110 106 dbSNP
rs1363143717 113 dbSNP
rs1295074928 115 dbSNP
rs1387535231 119 dbSNP
rs372772472 120 dbSNP
rs587648923 123 dbSNP
rs587751518 135 dbSNP
rs587711908 141 dbSNP
rs1170430834 145 dbSNP
rs1447083981 147 dbSNP
rs1372035625 153 dbSNP
rs782114379 174 dbSNP
rs1199010206 175 dbSNP
rs1434525703 183 dbSNP
rs1220631491 186 dbSNP
rs1490292179 199 dbSNP
rs587754512 200 dbSNP
rs587700589 204 dbSNP
rs1275911345 206 dbSNP
rs1207960572 207 dbSNP
rs1340715026 223 dbSNP
rs1250810558 242 dbSNP
rs587698037 242 dbSNP
rs587666499 257 dbSNP
rs1234128808 282 dbSNP
rs1333045953 293 dbSNP
rs1299473883 308 dbSNP
rs1404049527 309 dbSNP
rs1350910833 313 dbSNP
rs1309736596 332 dbSNP
rs587776125 345 dbSNP
rs1395753893 353 dbSNP
rs1172647467 371 dbSNP
rs1467134228 381 dbSNP
rs1375510401 401 dbSNP
rs1198264794 410 dbSNP
rs1480291063 411 dbSNP
rs1252951384 413 dbSNP
rs1184848310 414 dbSNP
rs1436565589 417 dbSNP
rs1250525178 419 dbSNP
rs1201043217 420 dbSNP
rs1347238594 438 dbSNP
rs1261445508 439 dbSNP
rs1223170043 441 dbSNP
rs1330131408 449 dbSNP
rs1289965341 459 dbSNP
rs1407833680 469 dbSNP
rs1335026046 475 dbSNP
rs1334757223 477 dbSNP
rs1397216291 482 dbSNP
rs1175135938 489 dbSNP
rs1457422986 491 dbSNP
rs1413794404 497 dbSNP
rs1161822259 499 dbSNP
rs1468929062 507 dbSNP
rs1363671017 511 dbSNP
rs1188883138 513 dbSNP
rs1444166476 525 dbSNP
rs1241325937 527 dbSNP
rs797027876 527 dbSNP
rs1203170073 528 dbSNP
rs376434773 529 dbSNP
rs1270252523 547 dbSNP
rs1349713171 548 dbSNP
rs1284666711 553 dbSNP
rs1246860425 566 dbSNP
rs1338680225 571 dbSNP
rs1335481256 572 dbSNP
rs370432583 574 dbSNP
rs1435270204 581 dbSNP
rs1390304353 586 dbSNP
rs587650031 594 dbSNP
rs1801794 597 dbSNP
rs1399273120 598 dbSNP
rs1407761088 615 dbSNP
rs1164243501 616 dbSNP
rs1474049583 620 dbSNP
rs1383994465 624 dbSNP
rs587733423 628 dbSNP
rs1182987493 629 dbSNP
rs1450180298 640 dbSNP
rs1250079138 645 dbSNP
rs1213954232 647 dbSNP
rs1446677815 648 dbSNP
rs1290298517 656 dbSNP
rs1211476242 657 dbSNP
rs1357186412 665 dbSNP
rs1314300873 668 dbSNP
rs1228420600 672 dbSNP
rs587693576 689 dbSNP
rs1366770121 705 dbSNP
rs1268006946 714 dbSNP
rs587617512 715 dbSNP
rs1429559143 724 dbSNP
rs1350163165 727 dbSNP
rs1407436794 729 dbSNP
rs1364185779 731 dbSNP
rs1163527816 734 dbSNP
rs1430439777 735 dbSNP
rs1392064511 741 dbSNP
rs1184906801 754 dbSNP
rs1475200620 755 dbSNP
rs1247579182 757 dbSNP
rs1200650209 761 dbSNP
rs1489802763 762 dbSNP
rs1290887602 768 dbSNP
rs1205826215 772 dbSNP
rs1344284594 773 dbSNP
rs587736087 774 dbSNP
rs1270251479 787 dbSNP
rs587663414 792 dbSNP
rs1367781079 793 dbSNP
rs1276257763 799 dbSNP
rs1407092636 803 dbSNP
rs1344056137 814 dbSNP
rs1302964274 815 dbSNP
rs1430928314 816 dbSNP
rs1356848917 830 dbSNP
rs1168421516 836 dbSNP
rs1409458318 837 dbSNP
rs1426066534 860 dbSNP
rs1174559907 870 dbSNP
rs1479312038 871 dbSNP
rs868926311 873 dbSNP
rs1698713 874 dbSNP
rs1267883173 875 dbSNP
rs1182699470 876 dbSNP
rs587728543 885 dbSNP
rs587671196 897 dbSNP
rs587597138 898 dbSNP
rs1312285774 919 dbSNP
rs1280246812 920 dbSNP
rs1221270222 921 dbSNP
rs1322453239 922 dbSNP
rs868958675 927 dbSNP
rs375361064 928 dbSNP
rs1283025828 934 dbSNP
rs1410898241 939 dbSNP
rs1376080560 946 dbSNP
rs1296973974 949 dbSNP
rs1441507340 954 dbSNP
rs1359850100 960 dbSNP
rs1338829647 962 dbSNP
rs1468413352 976 dbSNP
rs868946426 983 dbSNP
rs587716726 984 dbSNP
rs1428931030 1000 dbSNP
rs1159627939 1003 dbSNP
rs1473455756 1013 dbSNP
rs1405634104 1024 dbSNP
rs1176594049 1025 dbSNP
rs1238655086 1027 dbSNP
rs1201247571 1031 dbSNP
rs1460550151 1035 dbSNP
rs1268442887 1048 dbSNP
rs1229380460 1062 dbSNP
rs1319155114 1067 dbSNP
rs1305449955 1081 dbSNP
rs1223676329 1083 dbSNP
rs1380555214 1128 dbSNP
rs1338713000 1136 dbSNP
rs1450544216 1138 dbSNP
rs1405612071 1140 dbSNP
rs1321531138 1147 dbSNP
rs587649497 1154 dbSNP
rs1455127145 1160 dbSNP
rs781936147 1176 dbSNP
rs1343177937 1181 dbSNP
rs1158135621 1190 dbSNP
rs1424267806 1195 dbSNP
rs1387021509 1196 dbSNP
rs587602350 1212 dbSNP
rs587720178 1217 dbSNP
rs1443541799 1224 dbSNP
rs1248233701 1227 dbSNP
rs587666271 1240 dbSNP
rs1210252918 1242 dbSNP
rs370664186 1245 dbSNP
rs1259278216 1247 dbSNP
rs1215533495 1261 dbSNP
rs782019977 1267 dbSNP
rs1322773853 1269 dbSNP
rs1317856768 1272 dbSNP
rs1243851071 1274 dbSNP
rs1382183202 1291 dbSNP
rs1298466535 1307 dbSNP
rs1384091029 1309 dbSNP
rs1360154329 1321 dbSNP
rs1288003681 1331 dbSNP
rs1458281269 1353 dbSNP
rs1367355193 1354 dbSNP
rs1161646861 1368 dbSNP
rs587709394 1371 dbSNP
rs1390211759 1387 dbSNP
rs1194720446 1395 dbSNP
rs1426305065 1397 dbSNP
rs1260612894 1402 dbSNP
rs587675088 1404 dbSNP
rs1489042238 1413 dbSNP
rs1294553648 1418 dbSNP
rs1220857610 1420 dbSNP
rs1359385606 1421 dbSNP
rs371479159 1422 dbSNP
rs1275371971 1427 dbSNP
rs1229712450 1441 dbSNP
rs587694482 1450 dbSNP
rs587611765 1460 dbSNP
rs1387115225 1461 dbSNP
rs879995659 1467 dbSNP
rs1347205887 1478 dbSNP
rs1301095652 1479 dbSNP
rs1404205893 1480 dbSNP
rs1371099289 1484 dbSNP
rs587741565 1490 dbSNP
rs1460082165 1497 dbSNP
rs587683471 1499 dbSNP
rs1176392564 1500 dbSNP
rs1481233558 1524 dbSNP
rs1271439729 1554 dbSNP
rs1197733233 1558 dbSNP
rs376567043 1560 dbSNP
rs1251954792 1578 dbSNP
rs1197616505 1579 dbSNP
rs1337588818 1584 dbSNP
rs1250939502 1586 dbSNP
rs1234186274 1596 dbSNP
rs1325952715 1612 dbSNP
rs880003275 1620 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uacauccggaaaUCUAGUgaa 5'
                      :|||||   
Target 5' --ugaggaaggaGGAUCA--- 3'
1 - 16
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000369345.4 | 3UTR | UGAGGAAGGAGGAUCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.755 0.02 -0.286 0.27 7 Click to see details
BLCA -0.829 0.19 -0.500 0.33 3 Click to see details
UCEC 0.527 0.32 0.500 0.33 3 Click to see details
BRCA 0.145 0.45 0.500 0.33 3 Click to see details
BRCA 0.145 0.45 0.500 0.33 3 Click to see details
BRCA 0.145 0.45 0.500 0.33 3 Click to see details
BRCA 0.145 0.45 0.500 0.33 3 Click to see details
BRCA 0.145 0.45 0.500 0.33 3 Click to see details
109 hsa-miR-1245a Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT006574 BRCA2 BRCA2, DNA repair associated 2 1
MIRT055432 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT063879 RASSF8 Ras association domain family member 8 2 6
MIRT077025 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT095775 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT099172 MAP3K4 mitogen-activated protein kinase kinase kinase 4 2 2
MIRT175616 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT456518 LYPLAL1 lysophospholipase like 1 2 2
MIRT464457 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465747 TMPPE transmembrane protein with metallophosphoesterase domain 2 2
MIRT468257 SFXN4 sideroflexin 4 2 2
MIRT469216 RICTOR RPTOR independent companion of MTOR complex 2 2 2
MIRT472045 NPAT nuclear protein, coactivator of histone transcription 2 2
MIRT481795 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 2 2
MIRT500154 CREBBP CREB binding protein 2 2
MIRT506514 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 4
MIRT506915 KBTBD8 kelch repeat and BTB domain containing 8 2 6
MIRT513901 GRB10 growth factor receptor bound protein 10 2 6
MIRT519128 ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 2 2
MIRT528121 FOXH1 forkhead box H1 2 2
MIRT528942 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT540580 CEP89 centrosomal protein 89 2 2
MIRT545858 ZNF264 zinc finger protein 264 2 4
MIRT547147 PGM3 phosphoglucomutase 3 2 2
MIRT547434 MED4 mediator complex subunit 4 2 2
MIRT554650 ROBO1 roundabout guidance receptor 1 2 2
MIRT558524 CSRNP3 cysteine and serine rich nuclear protein 3 2 2
MIRT559762 ABHD5 abhydrolase domain containing 5 2 2
MIRT560438 GOLGA7B golgin A7 family member B 2 2
MIRT561974 LRRC59 leucine rich repeat containing 59 2 2
MIRT562442 DDIT4 DNA damage inducible transcript 4 2 2
MIRT563489 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT568265 BMP2K BMP2 inducible kinase 2 2
MIRT572522 KIAA0232 KIAA0232 2 2
MIRT612801 LSM14A LSM14A, mRNA processing body assembly factor 2 2
MIRT621533 ZNF507 zinc finger protein 507 2 2
MIRT625205 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT625615 ZNF84 zinc finger protein 84 2 2
MIRT629215 C12orf66 chromosome 12 open reading frame 66 2 2
MIRT629509 AS3MT arsenite methyltransferase 2 2
MIRT629769 STK25 serine/threonine kinase 25 2 2
MIRT630908 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT632508 RAB13 RAB13, member RAS oncogene family 2 2
MIRT636871 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT637106 CXorf23 BCLAF1 and THRAP3 family member 3 2 2
MIRT637332 FAM9B family with sequence similarity 9 member B 2 2
MIRT637553 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT637639 ZNF431 zinc finger protein 431 2 2
MIRT637836 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT638326 RNF11 ring finger protein 11 2 2
MIRT638393 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT642450 CLUAP1 clusterin associated protein 1 2 2
MIRT642616 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT643133 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT644324 NFKBID NFKB inhibitor delta 2 2
MIRT645150 DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease 2 2
MIRT645673 ADK adenosine kinase 2 2
MIRT646091 MGST3 microsomal glutathione S-transferase 3 2 2
MIRT646858 SLC35E4 solute carrier family 35 member E4 2 2
MIRT650153 ZNF426 zinc finger protein 426 2 2
MIRT652483 TMEM181 transmembrane protein 181 2 2
MIRT653790 SIRPA signal regulatory protein alpha 2 2
MIRT655526 PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 2 2
MIRT657077 JPH2 junctophilin 2 2 2
MIRT657322 HOOK3 hook microtubule tethering protein 3 2 2
MIRT662036 FUT2 fucosyltransferase 2 2 2
MIRT662322 ADM2 adrenomedullin 2 2 2
MIRT663211 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT663559 CCR6 C-C motif chemokine receptor 6 2 2
MIRT663937 ZNF554 zinc finger protein 554 2 2
MIRT664689 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 2 2
MIRT664709 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT665291 ZFP14 ZFP14 zinc finger protein 2 2
MIRT665572 TXNL1 thioredoxin like 1 2 2
MIRT667068 PAOX polyamine oxidase 2 2
MIRT667304 MYO5A myosin VA 2 2
MIRT667442 METTL14 methyltransferase like 14 2 2
MIRT668048 GTPBP10 GTP binding protein 10 2 2
MIRT669604 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT671088 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT674361 SLC35E3 solute carrier family 35 member E3 2 2
MIRT674962 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT676394 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676819 AGMAT agmatinase 2 2
MIRT676891 ENSA endosulfine alpha 2 2
MIRT677059 ZNF34 zinc finger protein 34 2 2
MIRT678424 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678735 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT678930 XPOT exportin for tRNA 2 2
MIRT678954 MYADM myeloid associated differentiation marker 2 2
MIRT679228 MAN2A2 mannosidase alpha class 2A member 2 2 2
MIRT679765 TLR6 toll like receptor 6 2 2
MIRT681992 HRH4 histamine receptor H4 2 2
MIRT687405 NSUN4 NOP2/Sun RNA methyltransferase family member 4 2 2
MIRT694570 RBMXL1 RNA binding motif protein, X-linked like 1 2 2
MIRT698449 TM4SF1 transmembrane 4 L six family member 1 2 2
MIRT706406 HAS2 hyaluronan synthase 2 2 2
MIRT706582 ZNF432 zinc finger protein 432 2 2
MIRT706838 VHLL VHL like 2 2
MIRT706909 DVL3 dishevelled segment polarity protein 3 2 2
MIRT707052 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT708583 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT708988 CABP4 calcium binding protein 4 2 2
MIRT713041 ADRA2B adrenoceptor alpha 2B 2 2
MIRT713731 SUCO SUN domain containing ossification factor 2 2
MIRT714968 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717485 PDE4DIP phosphodiesterase 4D interacting protein 2 2
MIRT722826 KLK2 kallikrein related peptidase 2 2 2
MIRT723305 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1245a Trametinib 11707110 NSC758246 approved resistant High Melanoma cell line (M14) (500nM)
hsa-miR-1245a Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (M14) (500nM)
hsa-miR-1245a Trametinib 11707110 NSC758246 approved resistant High Melanoma cell line (M14) (1uM)
hsa-miR-1245a Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (M14) (1uM)
hsa-miR-1245a Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-1245a Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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