pre-miRNA Information
pre-miRNA hsa-mir-6751   
Genomic Coordinates chr11: 65129916 - 65129978
Description Homo sapiens miR-6751 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6751-3p
Sequence 43| ACUGAGCCUCUCUCUCUCCAG |63
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM6795708 8 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs749989972 2 dbSNP
rs1266150108 3 dbSNP
rs1488089412 6 dbSNP
rs1259846893 8 dbSNP
rs3802937 10 dbSNP
rs371083440 12 dbSNP
rs1264909843 13 dbSNP
rs751042478 14 dbSNP
rs757551063 19 dbSNP
Putative Targets

Gene Information
Gene Symbol XPOT   
Synonyms XPO3
Description exportin for tRNA
Transcript NM_007235   
Expression
Putative miRNA Targets on XPOT
3'UTR of XPOT
(miRNA target sites are highlighted)
>XPOT|NM_007235|3'UTR
   1 GGACTGGATTTCCCTGTGCCTACTTCATGATCATGAATTCCAGTTAATTTATAAAGAGGCGATTTTTGTGTGCCATTCAC
  81 ACTGGTCTTTTTCACATTGTTTTGAGCTTATTGCAGTATATGTTTTGGGATTTTTCTGTAAAATGGGTGTAATTTTCCTA
 161 ATACAGGTATGTAACAACAAAAGAAGTTGCCTGCATGCCGGTCCAAATTGTTCTGTATAAAGATGCTCTTAAAAGACACA
 241 AGAGTTATCCTAGAACCTTAATTCTTTTTTATTTGAAATTTTAAGTCAAGTCCTTTATAAAGACCATAGCAGTGGAAAAC
 321 AGTGTACTTTTTAAAAAATTGCTGAATATAAAATCTTTGAAAATTTTCTTTATGTGTGAAGACACAAAGTATGGGGGAAG
 401 ACAGCAATCAAAACTAACTTTTTGTAGATAGCCATTTCATTTCTTTAAACTGTTTCAACGCCAATATGTATTCTACAAAA
 481 GAGAATGGTTTTAGGCTCCAGTGTTATACTTTTTTTTATATATATATATAAAAATAAACTTTACGTAGTGAAAAAAAAAA
 561 AAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaccUCUCUCUC-----UCCGA-GUCa 5'
              |||||  |     ||||| ||| 
Target 5' caaaAGAGAATGGTTTTAGGCTCCAGt 3'
476 - 502 121.00 -14.50
2
miRNA  3' gaccucUCUCUCUCCGAGuca 5'
                | | ||| ||||   
Target 5' ttctgtATAAAGATGCTCtta 3'
211 - 231 87.00 -6.42
3
miRNA  3' gaccucUCUCUCUCCGaguca 5'
                | | ||||||     
Target 5' taatttATAAAGAGGCgattt 3'
45 - 65 79.00 -7.23
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30539399 47 COSMIC
COSN31607122 50 COSMIC
COSN30483883 57 COSMIC
COSN13412211 61 COSMIC
COSN30499052 76 COSMIC
COSN31486090 153 COSMIC
COSN20077776 201 COSMIC
COSN17187019 238 COSMIC
COSN31595400 280 COSMIC
COSN1150759 323 COSMIC
COSN31538222 333 COSMIC
COSN19662669 334 COSMIC
COSN23032084 438 COSMIC
COSN31548864 444 COSMIC
COSN31593786 517 COSMIC
COSN27310764 518 COSMIC
COSN1580609 701 COSMIC
COSN24899102 1186 COSMIC
COSN28419180 1428 COSMIC
COSN20578086 1617 COSMIC
COSN7377646 1817 COSMIC
COSN20599316 1959 COSMIC
COSN22123032 2158 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs781469863 3 dbSNP
rs1260752557 5 dbSNP
rs1009377671 8 dbSNP
rs1170137144 14 dbSNP
rs560865130 15 dbSNP
rs377184395 18 dbSNP
rs756851639 21 dbSNP
rs1279399247 22 dbSNP
rs778678345 29 dbSNP
rs745342883 35 dbSNP
rs771568514 41 dbSNP
rs1450681900 44 dbSNP
rs779730845 51 dbSNP
rs746881681 52 dbSNP
rs768715368 53 dbSNP
rs367796508 61 dbSNP
rs532856035 62 dbSNP
rs763263809 63 dbSNP
rs1044775640 67 dbSNP
rs1022126219 69 dbSNP
rs926412676 95 dbSNP
rs1373856172 102 dbSNP
rs1395884162 112 dbSNP
rs1435734004 123 dbSNP
rs941663722 127 dbSNP
rs1001966555 129 dbSNP
rs1037372274 137 dbSNP
rs897522829 141 dbSNP
rs1261865737 147 dbSNP
rs1187738761 153 dbSNP
rs1033409736 162 dbSNP
rs1482103053 163 dbSNP
rs1279150947 165 dbSNP
rs1211091806 179 dbSNP
rs994411845 186 dbSNP
rs767480457 201 dbSNP
rs960512195 208 dbSNP
rs1047371996 218 dbSNP
rs992305691 223 dbSNP
rs1307984814 239 dbSNP
rs1247372007 240 dbSNP
rs1296460830 240 dbSNP
rs1353569944 245 dbSNP
rs1312511295 247 dbSNP
rs1415572747 261 dbSNP
rs758782702 263 dbSNP
rs1008418132 279 dbSNP
rs1292156024 283 dbSNP
rs1377683615 284 dbSNP
rs1166483063 293 dbSNP
rs908237151 295 dbSNP
rs1364613484 298 dbSNP
rs1171981312 300 dbSNP
rs961331408 305 dbSNP
rs1018744723 306 dbSNP
rs1473939723 310 dbSNP
rs1256140307 316 dbSNP
rs1188259831 320 dbSNP
rs1486432772 320 dbSNP
rs1295171999 321 dbSNP
rs1195001186 322 dbSNP
rs1480958139 332 dbSNP
rs1316248624 333 dbSNP
rs964168078 334 dbSNP
rs1235235858 340 dbSNP
rs972312150 342 dbSNP
rs1185361132 344 dbSNP
rs1292706341 347 dbSNP
rs773121335 350 dbSNP
rs1234174407 351 dbSNP
rs1357580627 360 dbSNP
rs758963930 369 dbSNP
rs920817718 369 dbSNP
rs1220828124 371 dbSNP
rs930816355 375 dbSNP
rs1001236812 382 dbSNP
rs1050605798 395 dbSNP
rs1416583062 408 dbSNP
rs1164984303 412 dbSNP
rs1244895508 430 dbSNP
rs910697707 432 dbSNP
rs1486752588 436 dbSNP
rs780478651 439 dbSNP
rs1032342003 444 dbSNP
rs760732630 451 dbSNP
rs552830804 459 dbSNP
rs988005145 460 dbSNP
rs766255982 461 dbSNP
rs143421142 465 dbSNP
rs566180174 467 dbSNP
rs1417872365 470 dbSNP
rs535202744 472 dbSNP
rs928786709 474 dbSNP
rs1238523906 477 dbSNP
rs903758540 479 dbSNP
rs374372386 487 dbSNP
rs1309569331 496 dbSNP
rs1439407490 500 dbSNP
rs755364096 501 dbSNP
rs926332674 505 dbSNP
rs1326076874 506 dbSNP
rs1462565986 508 dbSNP
rs1033503121 510 dbSNP
rs941785187 513 dbSNP
rs1013377966 517 dbSNP
rs184653732 517 dbSNP
rs190375333 518 dbSNP
rs1453781838 519 dbSNP
rs1253540487 525 dbSNP
rs928976950 528 dbSNP
rs1047321416 532 dbSNP
rs1453410701 537 dbSNP
rs1297917390 542 dbSNP
rs114016383 545 dbSNP
rs1416778725 546 dbSNP
rs1008364387 547 dbSNP
rs556548699 553 dbSNP
rs1039874692 559 dbSNP
rs1370632813 560 dbSNP
rs753759382 567 dbSNP
rs748355346 571 dbSNP
rs1324203391 572 dbSNP
rs1032869170 584 dbSNP
rs1287691639 588 dbSNP
rs910759190 593 dbSNP
rs182209477 602 dbSNP
rs1171594801 610 dbSNP
rs1433871664 621 dbSNP
rs1428082970 626 dbSNP
rs1216266437 629 dbSNP
rs1421409043 634 dbSNP
rs1175460186 637 dbSNP
rs146725057 638 dbSNP
rs1351893047 645 dbSNP
rs1192548169 649 dbSNP
rs1414210686 653 dbSNP
rs1024820876 654 dbSNP
rs1447868493 658 dbSNP
rs1189715088 661 dbSNP
rs553223037 672 dbSNP
rs1347638498 678 dbSNP
rs1281444403 679 dbSNP
rs1221471743 684 dbSNP
rs1257769139 696 dbSNP
rs1472207975 698 dbSNP
rs377672016 708 dbSNP
rs970628846 711 dbSNP
rs1359604153 719 dbSNP
rs981135243 721 dbSNP
rs572981560 724 dbSNP
rs1179580097 725 dbSNP
rs1033508703 729 dbSNP
rs963570139 732 dbSNP
rs1375865410 734 dbSNP
rs1420140090 738 dbSNP
rs1158420460 741 dbSNP
rs1359101583 743 dbSNP
rs35227457 745 dbSNP
rs1436953505 753 dbSNP
rs1408197624 762 dbSNP
rs973156583 767 dbSNP
rs542029377 770 dbSNP
rs919028591 777 dbSNP
rs928926302 778 dbSNP
rs561829269 789 dbSNP
rs987141363 790 dbSNP
rs903853054 791 dbSNP
rs554893916 792 dbSNP
rs530226704 795 dbSNP
rs1186115911 800 dbSNP
rs944302388 804 dbSNP
rs574635158 806 dbSNP
rs899986435 807 dbSNP
rs896323750 811 dbSNP
rs936859094 816 dbSNP
rs1308443809 818 dbSNP
rs1272926364 822 dbSNP
rs1215607905 824 dbSNP
rs1351311617 826 dbSNP
rs1319409785 828 dbSNP
rs1212731690 836 dbSNP
rs1280652235 839 dbSNP
rs543888093 853 dbSNP
rs563717422 856 dbSNP
rs771848411 866 dbSNP
rs775361830 867 dbSNP
rs543760850 893 dbSNP
rs1207424921 895 dbSNP
rs1234043725 896 dbSNP
rs113490471 920 dbSNP
rs1178626549 926 dbSNP
rs1378977976 930 dbSNP
rs1455885753 936 dbSNP
rs1024935391 937 dbSNP
rs1475036531 938 dbSNP
rs1026685190 939 dbSNP
rs763864635 941 dbSNP
rs1161045157 942 dbSNP
rs7136076 947 dbSNP
rs1002111968 949 dbSNP
rs543661009 950 dbSNP
rs963217161 951 dbSNP
rs1137583 954 dbSNP
rs1212519941 961 dbSNP
rs1334851094 966 dbSNP
rs1446118189 975 dbSNP
rs966247521 978 dbSNP
rs552626895 980 dbSNP
rs1221670571 983 dbSNP
rs973657951 989 dbSNP
rs1026034007 990 dbSNP
rs1448969461 1002 dbSNP
rs950449998 1005 dbSNP
rs1324042282 1009 dbSNP
rs987257287 1021 dbSNP
rs566344629 1031 dbSNP
rs140436153 1032 dbSNP
rs1399132091 1036 dbSNP
rs943059117 1040 dbSNP
rs1437955398 1056 dbSNP
rs1197423771 1057 dbSNP
rs1178131525 1058 dbSNP
rs1055058495 1059 dbSNP
rs1470183382 1060 dbSNP
rs1194668687 1062 dbSNP
rs1230166549 1063 dbSNP
rs1295329296 1064 dbSNP
rs1368430224 1064 dbSNP
rs1428941633 1064 dbSNP
rs36063420 1064 dbSNP
rs57078832 1064 dbSNP
rs80105021 1064 dbSNP
rs1246424245 1065 dbSNP
rs975674252 1066 dbSNP
rs1393608355 1073 dbSNP
rs1185573779 1080 dbSNP
rs949312804 1083 dbSNP
rs1037301648 1103 dbSNP
rs548781323 1106 dbSNP
rs921533117 1118 dbSNP
rs1184243984 1122 dbSNP
rs896981747 1127 dbSNP
rs1242342690 1132 dbSNP
rs1218267244 1134 dbSNP
rs1465208577 1134 dbSNP
rs936827731 1140 dbSNP
rs1234976647 1144 dbSNP
rs1313856549 1147 dbSNP
rs1398037958 1147 dbSNP
rs776314825 1152 dbSNP
rs1361295449 1168 dbSNP
rs568276429 1176 dbSNP
rs1026694968 1178 dbSNP
rs889461153 1195 dbSNP
rs1330357880 1209 dbSNP
rs1312631379 1211 dbSNP
rs187219486 1213 dbSNP
rs1274862730 1214 dbSNP
rs1379874881 1214 dbSNP
rs1271609169 1218 dbSNP
rs77183188 1220 dbSNP
rs945454574 1225 dbSNP
rs570153828 1226 dbSNP
rs191700809 1236 dbSNP
rs1484465862 1240 dbSNP
rs1002631424 1245 dbSNP
rs1211311457 1254 dbSNP
rs12366768 1258 dbSNP
rs1211032085 1260 dbSNP
rs1021577547 1270 dbSNP
rs1307028382 1275 dbSNP
rs778156148 1281 dbSNP
rs1278887739 1290 dbSNP
rs1220749008 1293 dbSNP
rs1353784722 1294 dbSNP
rs1293131865 1297 dbSNP
rs1450296258 1322 dbSNP
rs966847549 1327 dbSNP
rs1242950688 1328 dbSNP
rs1477592408 1330 dbSNP
rs1461882488 1331 dbSNP
rs1400436314 1334 dbSNP
rs181605492 1341 dbSNP
rs1474052625 1342 dbSNP
rs1351880205 1357 dbSNP
rs925336814 1362 dbSNP
rs1187745234 1363 dbSNP
rs1425361269 1375 dbSNP
rs1248108195 1393 dbSNP
rs938027169 1395 dbSNP
rs1480905818 1400 dbSNP
rs1258864371 1408 dbSNP
rs991251569 1410 dbSNP
rs749875418 1411 dbSNP
rs1462013992 1412 dbSNP
rs758947287 1416 dbSNP
rs1292918349 1438 dbSNP
rs917911842 1445 dbSNP
rs1342667287 1446 dbSNP
rs1305265085 1447 dbSNP
rs1391368550 1448 dbSNP
rs766327114 1451 dbSNP
rs1378275944 1459 dbSNP
rs55994408 1460 dbSNP
rs879185910 1468 dbSNP
rs573107954 1473 dbSNP
rs1393038863 1483 dbSNP
rs149953752 1485 dbSNP
rs918424705 1486 dbSNP
rs1340759795 1494 dbSNP
rs1180807882 1518 dbSNP
rs1440313985 1520 dbSNP
rs1239939589 1522 dbSNP
rs185375678 1526 dbSNP
rs1467213129 1532 dbSNP
rs1272582198 1537 dbSNP
rs1048183593 1539 dbSNP
rs1259395696 1541 dbSNP
rs1358704092 1541 dbSNP
rs1238771113 1544 dbSNP
rs1354798387 1545 dbSNP
rs1312131104 1547 dbSNP
rs1439298577 1548 dbSNP
rs1275910933 1562 dbSNP
rs575504017 1566 dbSNP
rs1356880409 1575 dbSNP
rs889514478 1583 dbSNP
rs1006624859 1584 dbSNP
rs545506850 1589 dbSNP
rs1420093703 1590 dbSNP
rs900830320 1593 dbSNP
rs1171719749 1596 dbSNP
rs1453692175 1596 dbSNP
rs1246246121 1599 dbSNP
rs1199651468 1615 dbSNP
rs1453604358 1618 dbSNP
rs998218041 1618 dbSNP
rs1488841442 1625 dbSNP
rs1288566463 1629 dbSNP
rs1232809741 1630 dbSNP
rs1021124278 1638 dbSNP
rs1274998298 1647 dbSNP
rs1207287032 1648 dbSNP
rs1324111888 1651 dbSNP
rs766860225 1654 dbSNP
rs966858912 1660 dbSNP
rs1362264408 1661 dbSNP
rs1000959442 1662 dbSNP
rs1434087095 1662 dbSNP
rs1425777013 1670 dbSNP
rs1032408089 1674 dbSNP
rs1479062471 1676 dbSNP
rs1371369990 1680 dbSNP
rs959477526 1682 dbSNP
rs1488730050 1683 dbSNP
rs1442994409 1686 dbSNP
rs1287099733 1688 dbSNP
rs990912134 1700 dbSNP
rs372972843 1716 dbSNP
rs111443918 1723 dbSNP
rs1336915430 1734 dbSNP
rs1276984186 1747 dbSNP
rs1218917524 1751 dbSNP
rs1341969346 1761 dbSNP
rs970712517 1770 dbSNP
rs1291275778 1771 dbSNP
rs577194380 1784 dbSNP
rs1336128106 1790 dbSNP
rs546202374 1796 dbSNP
rs752089523 1804 dbSNP
rs559455851 1818 dbSNP
rs931150361 1820 dbSNP
rs1048283360 1823 dbSNP
rs1186008655 1826 dbSNP
rs911048178 1828 dbSNP
rs942479977 1836 dbSNP
rs1471736039 1841 dbSNP
rs755343117 1856 dbSNP
rs1290932647 1878 dbSNP
rs1198718223 1879 dbSNP
rs528793628 1891 dbSNP
rs1009872860 1892 dbSNP
rs1227346838 1893 dbSNP
rs1042632545 1897 dbSNP
rs1285712663 1900 dbSNP
rs1440011812 1901 dbSNP
rs548429636 1902 dbSNP
rs781659681 1911 dbSNP
rs1466222382 1917 dbSNP
rs1402490997 1921 dbSNP
rs1163088995 1929 dbSNP
rs1376866365 1933 dbSNP
rs1415038784 1936 dbSNP
rs1396140928 1937 dbSNP
rs1238104705 1949 dbSNP
rs1179744070 1950 dbSNP
rs1458729637 1950 dbSNP
rs1250566848 1951 dbSNP
rs190240074 1952 dbSNP
rs1321939398 1954 dbSNP
rs1291850633 1956 dbSNP
rs1339245637 1960 dbSNP
rs375310037 1963 dbSNP
rs1310608861 1965 dbSNP
rs959564352 1966 dbSNP
rs1012748482 1967 dbSNP
rs1025022429 1969 dbSNP
rs1238389196 1975 dbSNP
rs1282775840 1978 dbSNP
rs116282279 1981 dbSNP
rs1167095163 1985 dbSNP
rs1399333062 1985 dbSNP
rs1199955756 1991 dbSNP
rs1254089576 1994 dbSNP
rs972734433 2001 dbSNP
rs1439628095 2011 dbSNP
rs1442066997 2019 dbSNP
rs201305129 2019 dbSNP
rs537730420 2019 dbSNP
rs1488483978 2022 dbSNP
rs1491151358 2022 dbSNP
rs1487859297 2023 dbSNP
rs1491244547 2023 dbSNP
rs918570851 2023 dbSNP
rs1286425106 2029 dbSNP
rs1242287010 2030 dbSNP
rs1345619813 2032 dbSNP
rs1239396357 2033 dbSNP
rs1360349445 2033 dbSNP
rs541199127 2033 dbSNP
rs878949926 2033 dbSNP
rs1299174620 2039 dbSNP
rs1422134356 2040 dbSNP
rs1376434987 2042 dbSNP
rs79646055 2044 dbSNP
rs77154731 2046 dbSNP
rs1438899827 2047 dbSNP
rs1156573369 2048 dbSNP
rs1426616253 2052 dbSNP
rs1396534700 2056 dbSNP
rs1184450943 2059 dbSNP
rs1466183992 2062 dbSNP
rs550296798 2063 dbSNP
rs1263703807 2071 dbSNP
rs1218508212 2079 dbSNP
rs952637884 2100 dbSNP
rs1301889009 2101 dbSNP
rs1399503153 2103 dbSNP
rs1255353134 2105 dbSNP
rs1210666471 2107 dbSNP
rs1312877791 2111 dbSNP
rs1392601449 2113 dbSNP
rs1332674279 2115 dbSNP
rs1376758141 2116 dbSNP
rs1238458630 2121 dbSNP
rs1279001372 2123 dbSNP
rs1402261305 2126 dbSNP
rs1370036149 2128 dbSNP
rs756358891 2132 dbSNP
rs984032268 2136 dbSNP
rs1302812085 2138 dbSNP
rs1466980049 2144 dbSNP
rs911100524 2154 dbSNP
rs71434050 2158 dbSNP
rs746297788 2160 dbSNP
rs182171872 2170 dbSNP
rs71457094 2177 dbSNP
rs112940681 2185 dbSNP
rs1464836495 2187 dbSNP
rs571468723 2189 dbSNP
rs922347837 2189 dbSNP
rs945721923 2189 dbSNP
rs12313449 2219 dbSNP
rs749262540 2222 dbSNP
rs1441488663 2225 dbSNP
rs771041167 2226 dbSNP
rs1182415122 2228 dbSNP
rs1484188206 2230 dbSNP
rs1199318019 2232 dbSNP
rs1257904686 2233 dbSNP
rs904189229 2234 dbSNP
rs936962327 2245 dbSNP
rs1258977195 2246 dbSNP
rs1053924026 2247 dbSNP
rs895311657 2254 dbSNP
rs779915723 2258 dbSNP
rs1176562039 2283 dbSNP
rs1269124337 2284 dbSNP
rs1329820533 2288 dbSNP
rs1464660688 2293 dbSNP
rs1433538022 2300 dbSNP
rs1400330652 2303 dbSNP
rs1172410748 2310 dbSNP
rs1456032223 2314 dbSNP
rs528690870 2315 dbSNP
rs1375537242 2316 dbSNP
rs906640148 2320 dbSNP
rs1236302496 2322 dbSNP
rs1177883662 2323 dbSNP
rs1170713208 2324 dbSNP
rs994241602 2334 dbSNP
rs546584155 2345 dbSNP
rs1238837825 2346 dbSNP
rs1200812952 2350 dbSNP
rs1354487772 2362 dbSNP
rs188042173 2384 dbSNP
rs1245988233 2388 dbSNP
rs1323816580 2393 dbSNP
rs1307741429 2394 dbSNP
rs1446646679 2399 dbSNP
rs952690411 2400 dbSNP
rs1332764005 2402 dbSNP
rs1445127161 2406 dbSNP
rs984043620 2409 dbSNP
rs1328510996 2419 dbSNP
rs1018157019 2423 dbSNP
rs868548459 2424 dbSNP
rs535785618 2427 dbSNP
rs1299520957 2429 dbSNP
rs976590607 2431 dbSNP
rs1158020689 2435 dbSNP
rs1328386384 2440 dbSNP
rs1373901619 2445 dbSNP
rs1219355703 2451 dbSNP
rs555687492 2452 dbSNP
rs945850810 2454 dbSNP
rs1266954269 2460 dbSNP
rs1257443971 2464 dbSNP
rs1489689271 2465 dbSNP
rs1317231030 2478 dbSNP
rs977136798 2482 dbSNP
rs925623972 2484 dbSNP
rs935634677 2487 dbSNP
rs1230456285 2489 dbSNP
rs1267115577 2497 dbSNP
rs575542792 2504 dbSNP
rs1388122319 2514 dbSNP
rs1358444071 2520 dbSNP
rs1297345401 2535 dbSNP
rs895374301 2538 dbSNP
rs538014563 2577 dbSNP
rs1477092785 2580 dbSNP
rs948284919 2582 dbSNP
rs548496772 2595 dbSNP
rs1481528036 2604 dbSNP
rs1261551853 2606 dbSNP
rs1216352484 2607 dbSNP
rs1488789945 2613 dbSNP
rs906688079 2616 dbSNP
rs994293841 2622 dbSNP
rs1343727349 2629 dbSNP
rs568779227 2639 dbSNP
rs888459185 2645 dbSNP
rs531120185 2651 dbSNP
rs557959103 2654 dbSNP
rs1400394720 2664 dbSNP
rs1422375934 2665 dbSNP
rs1332147625 2679 dbSNP
rs746943680 2680 dbSNP
rs1401645959 2682 dbSNP
rs1173219704 2691 dbSNP
rs577284952 2695 dbSNP
rs1470959952 2711 dbSNP
rs1421779088 2712 dbSNP
rs768480200 2713 dbSNP
rs1167588899 2714 dbSNP
rs1193156790 2731 dbSNP
rs1350944966 2733 dbSNP
rs1457749066 2738 dbSNP
rs1292102797 2741 dbSNP
rs1387436643 2753 dbSNP
rs1400773325 2758 dbSNP
rs1186115218 2768 dbSNP
rs1442339356 2770 dbSNP
rs1277807312 2777 dbSNP
rs1338578280 2789 dbSNP
rs1205020497 2790 dbSNP
rs551209211 2792 dbSNP
rs1315460772 2794 dbSNP
rs1018626827 2796 dbSNP
rs964018550 2801 dbSNP
rs12367640 2802 dbSNP
rs1341258182 2806 dbSNP
rs1235176279 2811 dbSNP
rs977061879 2817 dbSNP
rs1447274619 2823 dbSNP
rs1340988002 2847 dbSNP
rs1336030935 2851 dbSNP
rs1454671602 2859 dbSNP
rs1314804539 2860 dbSNP
rs1029535802 2862 dbSNP
rs370359795 2864 dbSNP
rs545939691 2888 dbSNP
rs967144229 2891 dbSNP
rs977148224 2904 dbSNP
rs1238566926 2908 dbSNP
rs781568244 2920 dbSNP
rs1185912508 2921 dbSNP
rs1489145841 2926 dbSNP
rs1216959946 2929 dbSNP
rs570881560 2933 dbSNP
rs1261994188 2934 dbSNP
rs1198937179 2938 dbSNP
rs1308877386 2941 dbSNP
rs1287547623 2947 dbSNP
rs559702501 2949 dbSNP
rs374369286 2953 dbSNP
rs1356730131 2958 dbSNP
rs56308954 2966 dbSNP
rs776360526 2970 dbSNP
rs539810131 2974 dbSNP
rs1330751104 2975 dbSNP
rs761466940 2984 dbSNP
rs1356500652 2994 dbSNP
rs371735474 2995 dbSNP
rs796098916 2995 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gaccucucucuCUCCGAGUCa 5'
                     | ||||||| 
Target 5' -------gccuGUGGCUCAGu 3'
1 - 14
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000332707.5 | 3UTR | GCCUGUGGCUCAGUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
77 hsa-miR-6751-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT130738 GATAD2B GATA zinc finger domain containing 2B 2 4
MIRT134924 CCND2 cyclin D2 2 2
MIRT273034 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT276645 KPNA3 karyopherin subunit alpha 3 2 6
MIRT446531 OAS2 2'-5'-oligoadenylate synthetase 2 2 2
MIRT456268 TDRKH tudor and KH domain containing 2 12
MIRT494454 BTG2 BTG anti-proliferation factor 2 2 2
MIRT494965 USP46 ubiquitin specific peptidase 46 2 2
MIRT496689 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT496697 RGS11 regulator of G protein signaling 11 2 2
MIRT504376 IRF4 interferon regulatory factor 4 2 6
MIRT510980 PFN2 profilin 2 2 6
MIRT512548 MFN2 mitofusin 2 2 6
MIRT513639 TP53INP2 tumor protein p53 inducible nuclear protein 2 2 2
MIRT514016 CAMSAP1 calmodulin regulated spectrin associated protein 1 2 4
MIRT514074 MTRNR2L6 MT-RNR2-like 6 2 2
MIRT515300 C15orf38-AP3S2 C15orf38-AP3S2 readthrough 2 4
MIRT517285 AP3S2 adaptor related protein complex 3 sigma 2 subunit 2 4
MIRT519075 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT520779 TCF23 transcription factor 23 2 2
MIRT522485 MFSD9 major facilitator superfamily domain containing 9 2 2
MIRT528856 PKP1 plakophilin 1 2 2
MIRT529081 PATE2 prostate and testis expressed 2 2 2
MIRT531209 PLA2G4D phospholipase A2 group IVD 2 2
MIRT533988 TAB3 TGF-beta activated kinase 1 and MAP3K7 binding protein 3 2 2
MIRT537024 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 2
MIRT537498 FAM168B family with sequence similarity 168 member B 2 2
MIRT553125 UBE2Z ubiquitin conjugating enzyme E2 Z 2 2
MIRT555591 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT556370 LUZP1 leucine zipper protein 1 2 2
MIRT569745 C2orf71 chromosome 2 open reading frame 71 2 2
MIRT570149 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT571243 FADS6 fatty acid desaturase 6 2 2
MIRT573065 TRIB1 tribbles pseudokinase 1 2 2
MIRT575533 Map4 microtubule-associated protein 4 2 2
MIRT575777 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT616558 ZNF512B zinc finger protein 512B 2 2
MIRT624851 ABI2 abl interactor 2 2 2
MIRT630078 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT631479 KLHL21 kelch like family member 21 2 2
MIRT632173 CCL22 C-C motif chemokine ligand 22 2 2
MIRT638397 QSOX2 quiescin sulfhydryl oxidase 2 2 4
MIRT641192 ISG20L2 interferon stimulated exonuclease gene 20 like 2 2 2
MIRT642562 TEX9 testis expressed 9 2 2
MIRT642935 KRTAP5-9 keratin associated protein 5-9 2 2
MIRT649703 ZNF175 zinc finger protein 175 2 2
MIRT650437 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT652113 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT652273 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT655215 PFKM phosphofructokinase, muscle 2 2
MIRT682778 ZNF852 zinc finger protein 852 2 2
MIRT683001 MUC20 mucin 20, cell surface associated 2 2
MIRT684320 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT689435 CYB561 cytochrome b561 2 2
MIRT693847 ZNF107 zinc finger protein 107 2 2
MIRT696715 TAX1BP3 Tax1 binding protein 3 2 2
MIRT698597 TEX261 testis expressed 261 2 2
MIRT699973 RREB1 ras responsive element binding protein 1 2 2
MIRT703310 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 2
MIRT706796 RAI1 retinoic acid induced 1 2 2
MIRT709004 CD109 CD109 molecule 2 2
MIRT709181 TBC1D10B TBC1 domain family member 10B 2 2
MIRT709835 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT711627 CORO1C coronin 1C 2 2
MIRT712634 RNF103-CHMP3 RNF103-CHMP3 readthrough 2 2
MIRT713694 CYB5R4 cytochrome b5 reductase 4 2 2
MIRT713752 SLC9A8 solute carrier family 9 member A8 2 2
MIRT714908 CHMP3 charged multivesicular body protein 3 2 2
MIRT716371 CBLL1 Cbl proto-oncogene like 1 2 2
MIRT718303 XPOT exportin for tRNA 2 2
MIRT718713 ANKRD18A ankyrin repeat domain 18A 2 2
MIRT718740 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT719441 NPTX2 neuronal pentraxin 2 2 2
MIRT720896 OTUD4 OTU deubiquitinase 4 2 2
MIRT722448 RXFP4 relaxin/insulin like family peptide receptor 4 2 2
MIRT723882 VKORC1 vitamin K epoxide reductase complex subunit 1 2 2
MIRT724586 SYNJ2BP synaptojanin 2 binding protein 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6751 Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780)
hsa-mir-6751 Triptolide 107985 NSC163062 sensitive Low Ovarian Cancer cell line (A2780)

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