pre-miRNA Information
pre-miRNA hsa-mir-6867   
Genomic Coordinates chr17: 40193597 - 40193663
Description Homo sapiens miR-6867 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6867-3p
Sequence 47| CUCUCCCUCUUUACCCACUAG |67
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM7811173 21 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1403216522 1 dbSNP
rs781776276 3 dbSNP
rs202050374 4 dbSNP
rs367842831 5 dbSNP
rs1223489976 6 dbSNP
rs907256096 9 dbSNP
rs753257137 14 dbSNP
rs757843554 17 dbSNP
rs371369162 18 dbSNP
Putative Targets

Gene Information
Gene Symbol METTL7A   
Synonyms AAM-B
Description methyltransferase like 7A
Transcript NM_014033   
Expression
Putative miRNA Targets on METTL7A
3'UTR of METTL7A
(miRNA target sites are highlighted)
>METTL7A|NM_014033|3'UTR
   1 TGTGAGCTGGCAGTTAAGAGCTGAATGGCTCAAAGAATTTAAAGCTTCAGTTTTACATTTAAAATGCTAAGTGGGAGAAG
  81 AGAAACCTTTTTTTTGGGGGGCGGTTTTTTTGGTTTGTTGTTGGTTTTTTTTTTTTTTTTGGCGGGAAGAAAGAGTTTTG
 161 CTCTTGTTGCCCAGGCTGGAGTGCAATGACGTGATCTCCGCTCACTGCAACCTCCACCTCGCGGGTTTAAGCGATTCTTC
 241 TGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGTGCCCACCACCATGCCCAGCTAATTTGTATTTTTAGTTGAGACAGGG
 321 TTTCACTACGTTGGCCAGGCTGGTCTTGAACTCCTGATCTCAGGCAATCCACCCACCTCAGCCTCCCAAAGTGCTGGGAT
 401 GACAGGCGTGAGCAACCGCACCCAGCTTAAGGTTTTTTTGTTTTGTTTTGAGACGGAGTTTTCGCTCTTGTTGCCCAGGC
 481 TGGAGTGCAATGCTGTGATCTCAGCTTACCACAACCTCCACCTCCCGGGTTCAAGTGATTCACCTGCCTCAGCCTCCTGA
 561 GTAGCTGGTATTACAGGCATGCGTCACCACGCCGGCTAATTTTGTACTTTTAGTAGAGATGGTGTTTCCCCACGTTGGTC
 641 AGTCTGGTCTCAAATTCCTGACCTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGTGATTACAGACGTCAGCCAC
 721 CATGCCTGGCCTGAAACCTTTTTTAGGTAAAGTTGAATTCCATCCTTAAAAGTTTCTGTTATATCCTATTTAGCCATTTT
 801 CTATTGTCTCCCAAAGAATTCACATCAAAAAAACAGCTTTGAACTCCCCCTTCAAAGGAAACAGTCGACTTTCATAATTA
 881 GCATCTACCATTATCCCCAAATCTTATTTTATTCATTGACTTGAAATTTTTTCCAATTGCTTTTTTTTTTTTTTTTTTAA
 961 GGTTAAGAGCAGAGGTTTACTAGGCCAAAGAAAGAGAATAGCTCTCTGTTGCAGAGAGGGGTCCTGGAGAAATGGGTTAC
1041 CCCAGTTGTCTTATTTAAATGGTTACCCATCAGATTTTAATTTTATCTTCTCTTTGAGAGCTTGGTAATAAGAAGCACTT
1121 AAATCACTCCAAAGAAGACTTTAAAAAGGGAGCAGTGAAAAGGTCTTAATAATTTATTGATTGAATTAAGAAATACTAGC
1201 TAATTAAGAATCTGAGTCTAAACAGCACAGATTTTTTCTTTCTGCTTTTAAATTGTGTTTTAAAAAAAGAGACAGGGGGC
1281 TGGGCGTGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTAGGAGTTAAAGACC
1361 AGCCTGGCCAACATGGCAAAACCCTACTAAAGATACAAAAAAAAAAAAAAATTAGCCAGGCGTGGTGGTGGGTGCCTGTA
1441 ATCCCAGGTACTTGGAAGGCTGAGGCAGGAGAATCTCTTGAACCCAGAAGGCGAAGGTTGCAGTGAACCGAGATCATGCC
1521 ATTGTACTCTAGCCTGGGTGACAAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAGTAGAGACAGGGA
1601 GACAGGGTCTCACTGTGTTGCCTAGGCCGGTCTTGAACTCCTGGGCTCAAGTGATTCTCCCACCTTGACCTCCTAAATTG
1681 TTGGGATTACAGGTGTGAGACAGTGCACCTGGCCGAAATAGCTCAAGTTTCTGAAAAACAAATCTGAATCTATTTGTTAT
1761 TCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTGCCACACCTAGTTCTGCCCAGCTTTATGTCTTTTAT
1841 TCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAAGTCTTAAGATAAAGATTGTACTTGACAGTTTAGTA
1921 TATCCATAAAACTATTTGAGGTGGTTAAGGTTCTTGGGTTCATTTTCCTTAATACTTTGCTGAATATTGTAGATTGTAGG
2001 CAATGAAAAAGTCTACTAAATTAGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATCT
2081 GTGAGTCTGTAAAGAAATAAATATTTTTTGGATTATTCTTATCTAATTCCACCCCTGTTGGAAGATGATTTCTTTGTTCT
2161 TTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTT
2241 CTGCAATGGTTTGTAGGAATTTTAATAAATGTAGTATATTTTCTGAGATGATTTTGTAAAAGTACTATTTTAAATATCAA
2321 ATCAACCAATAAATTCACATTTGTGTTAGGAACAGAAATATGGTTTA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaucaccCAUUUC--UCCCUCUc 5'
                 |||:||  ||||||| 
Target 5' aaaagaaGTAGAGACAGGGAGAc 3'
1581 - 1603 156.00 -14.90
2
miRNA  3' gaucacccAUUUCUCCCUCuc 5'
                  |||| ||||||  
Target 5' gaagacttTAAAAAGGGAGca 3'
1134 - 1154 137.00 -9.50
3
miRNA  3' gaucacccauUUCUCCCUCUc 5'
                    ||| |||||| 
Target 5' ttaaaatgctAAGTGGGAGAa 3'
59 - 79 123.00 -10.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31592508 7 COSMIC
COSN31591491 11 COSMIC
COSN31567454 83 COSMIC
COSN30676969 96 COSMIC
COSN7373302 96 COSMIC
COSN20077653 103 COSMIC
COSN27405338 141 COSMIC
COSN32071831 142 COSMIC
COSN5796350 684 COSMIC
COSN20109573 958 COSMIC
COSN20092570 1165 COSMIC
COSN22690605 1206 COSMIC
COSN20447401 1721 COSMIC
COSN29932741 2242 COSMIC
rs319941 1497 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1198967164 1 dbSNP
rs778701616 4 dbSNP
rs371476027 5 dbSNP
rs757470610 7 dbSNP
rs1014356908 10 dbSNP
rs781337571 11 dbSNP
rs1419096080 16 dbSNP
rs1412523148 24 dbSNP
rs1045809294 27 dbSNP
rs375543743 36 dbSNP
rs770010577 53 dbSNP
rs1027116682 63 dbSNP
rs969754496 66 dbSNP
rs1001405059 68 dbSNP
rs1216291675 74 dbSNP
rs1487513906 76 dbSNP
rs1288706748 85 dbSNP
rs928278778 87 dbSNP
rs1310717727 88 dbSNP
rs1361445994 88 dbSNP
rs959975490 88 dbSNP
rs1466984282 93 dbSNP
rs368952628 96 dbSNP
rs913090167 97 dbSNP
rs1009106137 103 dbSNP
rs372995739 104 dbSNP
rs1010556973 113 dbSNP
rs1454311124 114 dbSNP
rs1192496378 125 dbSNP
rs1264381130 125 dbSNP
rs1475918652 125 dbSNP
rs571166713 125 dbSNP
rs796138630 125 dbSNP
rs925396935 125 dbSNP
rs1206206052 126 dbSNP
rs1488468604 128 dbSNP
rs1344437105 130 dbSNP
rs201354558 131 dbSNP
rs1257604093 132 dbSNP
rs1280451401 132 dbSNP
rs932742452 138 dbSNP
rs1312765281 141 dbSNP
rs1203722667 142 dbSNP
rs182969639 144 dbSNP
rs1482120938 145 dbSNP
rs1184372015 148 dbSNP
rs1252849719 150 dbSNP
rs1477803322 157 dbSNP
rs1049745509 165 dbSNP
rs1394653676 167 dbSNP
rs1427682795 173 dbSNP
rs1463770741 175 dbSNP
rs1375117726 179 dbSNP
rs891106899 180 dbSNP
rs1434059630 182 dbSNP
rs1170377666 190 dbSNP
rs1369195764 191 dbSNP
rs1196072733 195 dbSNP
rs1468958249 196 dbSNP
rs188043649 200 dbSNP
rs369125040 201 dbSNP
rs1308083530 204 dbSNP
rs1257585427 208 dbSNP
rs193093014 212 dbSNP
rs565829859 217 dbSNP
rs575319411 218 dbSNP
rs1433841586 219 dbSNP
rs751393955 221 dbSNP
rs1019962187 222 dbSNP
rs1368041117 223 dbSNP
rs537301222 224 dbSNP
rs1295342144 229 dbSNP
rs1008452169 231 dbSNP
rs986574503 233 dbSNP
rs544179987 234 dbSNP
rs1037216015 236 dbSNP
rs963761031 243 dbSNP
rs897329978 245 dbSNP
rs11169622 249 dbSNP
rs974904397 250 dbSNP
rs1465806707 253 dbSNP
rs1376345948 256 dbSNP
rs1176040353 260 dbSNP
rs920748830 265 dbSNP
rs1489025190 266 dbSNP
rs1455133585 268 dbSNP
rs1238121802 270 dbSNP
rs996040271 274 dbSNP
rs1439669144 276 dbSNP
rs200659374 278 dbSNP
rs930921776 279 dbSNP
rs1001274023 285 dbSNP
rs984082804 289 dbSNP
rs761450422 304 dbSNP
rs529935738 308 dbSNP
rs1451859314 313 dbSNP
rs1168746407 318 dbSNP
rs1278006824 319 dbSNP
rs1236390193 321 dbSNP
rs1384074194 325 dbSNP
rs1348430165 328 dbSNP
rs1308451749 330 dbSNP
rs139247956 331 dbSNP
rs560067365 338 dbSNP
rs1045756344 341 dbSNP
rs1350057238 347 dbSNP
rs532148201 349 dbSNP
rs905987471 360 dbSNP
rs1329089231 375 dbSNP
rs551475948 378 dbSNP
rs1395129344 380 dbSNP
rs937391251 381 dbSNP
rs1429804912 387 dbSNP
rs1054320864 409 dbSNP
rs1020578751 411 dbSNP
rs968659991 412 dbSNP
rs1367326682 418 dbSNP
rs1267875818 419 dbSNP
rs1471188941 420 dbSNP
rs1364501716 434 dbSNP
rs1187104217 442 dbSNP
rs1440966479 449 dbSNP
rs576901712 450 dbSNP
rs571368091 455 dbSNP
rs932751084 456 dbSNP
rs1285156670 459 dbSNP
rs1020586726 464 dbSNP
rs779644047 465 dbSNP
rs985484925 466 dbSNP
rs372864991 468 dbSNP
rs1322526373 482 dbSNP
rs891036960 486 dbSNP
rs1353113724 489 dbSNP
rs944007662 492 dbSNP
rs1037248666 500 dbSNP
rs1007887261 509 dbSNP
rs1246563769 511 dbSNP
rs1296856234 515 dbSNP
rs56840343 522 dbSNP
rs931575647 526 dbSNP
rs1162679075 527 dbSNP
rs963790338 528 dbSNP
rs1049070201 543 dbSNP
rs754344926 572 dbSNP
rs1475399000 574 dbSNP
rs1471534786 578 dbSNP
rs906014837 579 dbSNP
rs973763419 583 dbSNP
rs1035413617 584 dbSNP
rs1456356603 591 dbSNP
rs1156754484 592 dbSNP
rs1279922992 594 dbSNP
rs540806863 595 dbSNP
rs375575941 605 dbSNP
rs1340295986 611 dbSNP
rs1268849643 617 dbSNP
rs1433344138 621 dbSNP
rs1336025112 634 dbSNP
rs369296108 635 dbSNP
rs1009943634 636 dbSNP
rs1403626935 638 dbSNP
rs373396940 656 dbSNP
rs1165882707 660 dbSNP
rs969067766 663 dbSNP
rs978682478 672 dbSNP
rs1184495558 680 dbSNP
rs1476290691 684 dbSNP
rs950329138 685 dbSNP
rs1228015904 688 dbSNP
rs1242585914 691 dbSNP
rs528600452 696 dbSNP
rs1466727636 701 dbSNP
rs1254410896 705 dbSNP
rs953186279 706 dbSNP
rs927266492 710 dbSNP
rs1270452073 712 dbSNP
rs573490590 712 dbSNP
rs1216650746 713 dbSNP
rs1340527269 723 dbSNP
rs937422400 726 dbSNP
rs912607130 738 dbSNP
rs1373278050 739 dbSNP
rs1326729075 761 dbSNP
rs1446143717 770 dbSNP
rs1352908939 772 dbSNP
rs1172840087 773 dbSNP
rs1411430606 774 dbSNP
rs944123789 782 dbSNP
rs539192951 787 dbSNP
rs1189075240 794 dbSNP
rs558687498 798 dbSNP
rs878897011 805 dbSNP
rs1237536386 815 dbSNP
rs945904081 824 dbSNP
rs1206238732 825 dbSNP
rs1179574932 827 dbSNP
rs1438718054 829 dbSNP
rs777801678 845 dbSNP
rs1413652770 846 dbSNP
rs1350604790 848 dbSNP
rs1041548583 850 dbSNP
rs891059276 858 dbSNP
rs1008085227 859 dbSNP
rs1457601214 860 dbSNP
rs1300086707 863 dbSNP
rs1371346946 863 dbSNP
rs1443293234 865 dbSNP
rs114891014 867 dbSNP
rs906040746 868 dbSNP
rs899483111 869 dbSNP
rs937461382 871 dbSNP
rs544264219 875 dbSNP
rs764523162 884 dbSNP
rs1417977800 888 dbSNP
rs1405212279 892 dbSNP
rs1336323008 904 dbSNP
rs995217571 911 dbSNP
rs1356185596 916 dbSNP
rs1236545978 930 dbSNP
rs1209084745 937 dbSNP
rs1027113719 938 dbSNP
rs374892078 939 dbSNP
rs1281645094 940 dbSNP
rs1216577179 941 dbSNP
rs1378634569 941 dbSNP
rs377202263 941 dbSNP
rs397851060 941 dbSNP
rs398019536 941 dbSNP
rs56130607 941 dbSNP
rs770201700 941 dbSNP
rs1286706088 942 dbSNP
rs1313376205 944 dbSNP
rs1453050560 954 dbSNP
rs1342909699 959 dbSNP
rs1352515447 959 dbSNP
rs1229436735 960 dbSNP
rs1274604807 962 dbSNP
rs1343559725 963 dbSNP
rs560705578 970 dbSNP
rs1185418008 981 dbSNP
rs1476375817 984 dbSNP
rs373902631 997 dbSNP
rs1193563341 1000 dbSNP
rs1485146728 1001 dbSNP
rs770877323 1002 dbSNP
rs951157985 1010 dbSNP
rs776738669 1019 dbSNP
rs1015076599 1027 dbSNP
rs1482455560 1030 dbSNP
rs904165135 1034 dbSNP
rs1202358896 1041 dbSNP
rs971670967 1045 dbSNP
rs115758497 1051 dbSNP
rs1381449932 1063 dbSNP
rs1261078511 1067 dbSNP
rs1290590659 1072 dbSNP
rs1430756004 1073 dbSNP
rs367811557 1074 dbSNP
rs537350913 1074 dbSNP
rs1162348619 1081 dbSNP
rs1462745589 1089 dbSNP
rs1418144016 1091 dbSNP
rs145221743 1092 dbSNP
rs958656751 1100 dbSNP
rs796893638 1103 dbSNP
rs990142220 1105 dbSNP
rs1264413643 1114 dbSNP
rs1478850988 1128 dbSNP
rs1251291596 1132 dbSNP
rs914680050 1133 dbSNP
rs1018726308 1137 dbSNP
rs946132514 1140 dbSNP
rs1226363713 1149 dbSNP
rs1305569381 1151 dbSNP
rs1297601437 1152 dbSNP
rs537093162 1158 dbSNP
rs1369598337 1163 dbSNP
rs1041970369 1165 dbSNP
rs11503921 1166 dbSNP
rs1323243569 1167 dbSNP
rs1442470134 1180 dbSNP
rs912366769 1180 dbSNP
rs1173107873 1184 dbSNP
rs762012577 1187 dbSNP
rs1297274476 1191 dbSNP
rs1460768469 1203 dbSNP
rs1375183242 1210 dbSNP
rs1039554187 1215 dbSNP
rs11503625 1219 dbSNP
rs560361245 1226 dbSNP
rs1454266458 1229 dbSNP
rs1393822405 1233 dbSNP
rs899514137 1259 dbSNP
rs1250017697 1262 dbSNP
rs377548291 1262 dbSNP
rs3180984 1270 dbSNP
rs995170185 1271 dbSNP
rs1048059498 1272 dbSNP
rs1252919460 1274 dbSNP
rs965464126 1274 dbSNP
rs1372690943 1275 dbSNP
rs972826066 1276 dbSNP
rs1235792660 1278 dbSNP
rs1371156699 1279 dbSNP
rs1392165340 1280 dbSNP
rs1305813878 1285 dbSNP
rs918603041 1286 dbSNP
rs879288414 1287 dbSNP
rs952716446 1291 dbSNP
rs886883454 1293 dbSNP
rs1003954716 1294 dbSNP
rs927568106 1296 dbSNP
rs1015520661 1298 dbSNP
rs561292157 1299 dbSNP
rs1421050444 1303 dbSNP
rs3180343 1305 dbSNP
rs3180985 1306 dbSNP
rs765524209 1307 dbSNP
rs1003129550 1312 dbSNP
rs1034566123 1313 dbSNP
rs1225613524 1317 dbSNP
rs1205561138 1321 dbSNP
rs1276141547 1324 dbSNP
rs945802913 1325 dbSNP
rs1278077393 1326 dbSNP
rs1483219042 1327 dbSNP
rs1345103251 1328 dbSNP
rs1208878912 1331 dbSNP
rs1264760534 1332 dbSNP
rs993656892 1335 dbSNP
rs1337091780 1338 dbSNP
rs1307296048 1340 dbSNP
rs1453131735 1342 dbSNP
rs958941720 1343 dbSNP
rs1315314716 1344 dbSNP
rs1435954141 1346 dbSNP
rs1027805481 1347 dbSNP
rs3180344 1348 dbSNP
rs3180345 1355 dbSNP
rs319940 1366 dbSNP
rs1447558253 1368 dbSNP
rs3180346 1374 dbSNP
rs980850850 1393 dbSNP
rs1166852953 1395 dbSNP
rs1034106442 1397 dbSNP
rs1283482235 1397 dbSNP
rs35013187 1397 dbSNP
rs398019537 1397 dbSNP
rs71089713 1397 dbSNP
rs1392095748 1398 dbSNP
rs543664528 1404 dbSNP
rs1352241402 1414 dbSNP
rs1293174705 1415 dbSNP
rs1388796334 1417 dbSNP
rs1018758836 1418 dbSNP
rs1449225128 1419 dbSNP
rs914564920 1422 dbSNP
rs1326971284 1423 dbSNP
rs1365181448 1424 dbSNP
rs960660347 1427 dbSNP
rs1383975543 1429 dbSNP
rs992158529 1430 dbSNP
rs961831386 1431 dbSNP
rs1164475027 1432 dbSNP
rs1460124414 1444 dbSNP
rs1420307729 1446 dbSNP
rs3180986 1447 dbSNP
rs1166742414 1454 dbSNP
rs3180987 1458 dbSNP
rs1433525319 1460 dbSNP
rs967878957 1478 dbSNP
rs1300363973 1479 dbSNP
rs994674967 1485 dbSNP
rs3180989 1487 dbSNP
rs977507792 1493 dbSNP
rs185500414 1494 dbSNP
rs565085447 1496 dbSNP
rs319941 1497 dbSNP
rs550991099 1499 dbSNP
rs1210260263 1503 dbSNP
rs1274701360 1505 dbSNP
rs3180991 1508 dbSNP
rs187621980 1510 dbSNP
rs767344349 1511 dbSNP
rs3180992 1512 dbSNP
rs958965881 1517 dbSNP
rs1230344966 1519 dbSNP
rs377657191 1522 dbSNP
rs917434157 1523 dbSNP
rs1438806879 1525 dbSNP
rs1396911924 1531 dbSNP
rs370491373 1535 dbSNP
rs1405713061 1540 dbSNP
rs1418575727 1544 dbSNP
rs1164135786 1546 dbSNP
rs1166081436 1546 dbSNP
rs1476320091 1548 dbSNP
rs762022573 1551 dbSNP
rs1366990556 1555 dbSNP
rs1466770282 1556 dbSNP
rs536612179 1557 dbSNP
rs546985900 1558 dbSNP
rs1437608566 1561 dbSNP
rs1172992263 1562 dbSNP
rs1271400532 1562 dbSNP
rs1275625640 1562 dbSNP
rs1326535621 1562 dbSNP
rs1353692030 1562 dbSNP
rs1371041011 1562 dbSNP
rs1415221282 1562 dbSNP
rs1431435600 1562 dbSNP
rs1441837981 1562 dbSNP
rs1452001637 1562 dbSNP
rs754366448 1562 dbSNP
rs78329969 1566 dbSNP
rs1388373633 1568 dbSNP
rs1433279355 1572 dbSNP
rs886750253 1581 dbSNP
rs1323169368 1583 dbSNP
rs946201203 1583 dbSNP
rs939784486 1586 dbSNP
rs1041861133 1587 dbSNP
rs1280216618 1588 dbSNP
rs1209401426 1589 dbSNP
rs1350134347 1590 dbSNP
rs925763948 1590 dbSNP
rs1046108516 1594 dbSNP
rs1371409373 1596 dbSNP
rs1281518634 1597 dbSNP
rs1341952164 1601 dbSNP
rs3180347 1605 dbSNP
rs907377790 1610 dbSNP
rs3209367 1616 dbSNP
rs3209368 1617 dbSNP
rs779962175 1629 dbSNP
rs1267022388 1630 dbSNP
rs1360842435 1631 dbSNP
rs567121530 1636 dbSNP
rs1210308194 1639 dbSNP
rs1268737025 1643 dbSNP
rs3209369 1645 dbSNP
rs3209370 1646 dbSNP
rs539284466 1650 dbSNP
rs3209371 1651 dbSNP
rs3209372 1653 dbSNP
rs3209373 1654 dbSNP
rs3209374 1657 dbSNP
rs117919526 1658 dbSNP
rs3209375 1659 dbSNP
rs1040241220 1665 dbSNP
rs1315695914 1670 dbSNP
rs569006330 1679 dbSNP
rs1186406582 1696 dbSNP
rs897673521 1699 dbSNP
rs1022061478 1709 dbSNP
rs1215101720 1711 dbSNP
rs1315255905 1714 dbSNP
rs967364294 1715 dbSNP
rs537522287 1716 dbSNP
rs977915321 1733 dbSNP
rs1292386632 1739 dbSNP
rs1412708509 1763 dbSNP
rs375440197 1768 dbSNP
rs192585715 1769 dbSNP
rs1429385032 1775 dbSNP
rs1342965794 1782 dbSNP
rs146870720 1788 dbSNP
rs1160914062 1796 dbSNP
rs888566058 1798 dbSNP
rs1006028970 1799 dbSNP
rs1019689636 1804 dbSNP
rs958673165 1821 dbSNP
rs1257458264 1827 dbSNP
rs965433009 1829 dbSNP
rs1161783087 1846 dbSNP
rs977675149 1851 dbSNP
rs993082903 1854 dbSNP
rs1346354970 1865 dbSNP
rs1484932142 1870 dbSNP
rs975242315 1871 dbSNP
rs1209457954 1879 dbSNP
rs879515167 1882 dbSNP
rs1403724598 1894 dbSNP
rs1414803752 1896 dbSNP
rs1231171882 1906 dbSNP
rs1323333232 1908 dbSNP
rs1287346756 1921 dbSNP
rs1313305662 1924 dbSNP
rs1348197065 1939 dbSNP
rs574365584 1945 dbSNP
rs931237874 1951 dbSNP
rs1393218437 1958 dbSNP
rs1323541634 1967 dbSNP
rs984032765 1972 dbSNP
rs1311602995 1983 dbSNP
rs968027636 1990 dbSNP
rs908208800 1993 dbSNP
rs939669267 1998 dbSNP
rs1427199509 1999 dbSNP
rs926096164 2016 dbSNP
rs199685384 2021 dbSNP
rs1046479437 2024 dbSNP
rs754883219 2025 dbSNP
rs1063847 2030 dbSNP
rs935792573 2039 dbSNP
rs1486709573 2041 dbSNP
rs906304289 2044 dbSNP
rs937729817 2045 dbSNP
rs1211898654 2069 dbSNP
rs319942 2073 dbSNP
rs1471718443 2078 dbSNP
rs115988708 2095 dbSNP
rs576724480 2102 dbSNP
rs1203570929 2109 dbSNP
rs1021842170 2123 dbSNP
rs1409165323 2134 dbSNP
rs760394627 2135 dbSNP
rs1299769223 2144 dbSNP
rs1174589930 2146 dbSNP
rs781141469 2152 dbSNP
rs1228470223 2154 dbSNP
rs1361355521 2161 dbSNP
rs545635713 2169 dbSNP
rs184070661 2174 dbSNP
rs1388211027 2192 dbSNP
rs1391021121 2202 dbSNP
rs1400018221 2203 dbSNP
rs73308085 2208 dbSNP
rs1460817386 2209 dbSNP
rs1372894493 2213 dbSNP
rs1169835131 2222 dbSNP
rs1053450 2226 dbSNP
rs1048918032 2232 dbSNP
rs1434150280 2234 dbSNP
rs965464195 2244 dbSNP
rs544391937 2247 dbSNP
rs1433925927 2260 dbSNP
rs1250084111 2267 dbSNP
rs975442186 2267 dbSNP
rs1034395568 2271 dbSNP
rs894488468 2278 dbSNP
rs1276654651 2291 dbSNP
rs1205872873 2293 dbSNP
rs1028133485 2295 dbSNP
rs952538570 2300 dbSNP
rs371084140 2314 dbSNP
rs1277499444 2322 dbSNP
rs547610708 2335 dbSNP
rs908490146 2339 dbSNP
rs1331286902 2345 dbSNP
rs530043160 2346 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gaucacccaUUUCUCCCUCUc 5'
                   ||||| | ||| 
Target 5' --------aAAAGAAGUAGAg 3'
1 - 13
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000332160.4 | 3UTR | AAAAGAAGUAGAGACAGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
203 hsa-miR-6867-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT078229 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT107799 SLC1A1 solute carrier family 1 member 1 2 2
MIRT115808 CAPN15 calpain 15 2 2
MIRT137570 RCOR1 REST corepressor 1 2 2
MIRT161372 MBNL1 muscleblind like splicing regulator 1 2 2
MIRT320477 HOXA10 homeobox A10 2 2
MIRT444449 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT461305 MRPS27 mitochondrial ribosomal protein S27 2 6
MIRT470306 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT471679 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT475546 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT480901 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT489368 RAB11B RAB11B, member RAS oncogene family 2 2
MIRT489557 PLD6 phospholipase D family member 6 2 2
MIRT494969 TMEM233 transmembrane protein 233 2 2
MIRT496634 SLC46A1 solute carrier family 46 member 1 2 2
MIRT500259 ZNF788 zinc finger family member 788 2 6
MIRT500272 ZNF781 zinc finger protein 781 2 8
MIRT500328 ZNF487P zinc finger protein 487 1 3
MIRT504012 ACSL6 acyl-CoA synthetase long chain family member 6 2 2
MIRT504830 EREG epiregulin 2 2
MIRT513588 DCTN6 dynactin subunit 6 2 2
MIRT520896 STMN1 stathmin 1 2 2
MIRT525275 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT526166 ANKRD65 ankyrin repeat domain 65 2 2
MIRT526582 CCDC43 coiled-coil domain containing 43 2 2
MIRT527812 TMEM74B transmembrane protein 74B 2 2
MIRT528141 LRRC38 leucine rich repeat containing 38 2 2
MIRT529903 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531980 SLCO1B3 solute carrier organic anion transporter family member 1B3 2 2
MIRT532251 TBPL2 TATA-box binding protein like 2 2 2
MIRT534300 SKIDA1 SKI/DACH domain containing 1 2 2
MIRT534879 QKI QKI, KH domain containing RNA binding 2 2
MIRT538305 CSNK2A1 casein kinase 2 alpha 1 2 2
MIRT539385 ADRB1 adrenoceptor beta 1 2 2
MIRT541304 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT543960 RNF20 ring finger protein 20 2 2
MIRT544380 ZNF266 zinc finger protein 266 2 2
MIRT544451 KRBOX4 KRAB box domain containing 4 2 2
MIRT545783 ZNF791 zinc finger protein 791 2 4
MIRT548156 FRAT2 FRAT2, WNT signaling pathway regulator 2 2
MIRT556660 KMT2D lysine methyltransferase 2D 2 4
MIRT557715 GABARAPL1 GABA type A receptor associated protein like 1 2 2
MIRT562701 ZNF415 zinc finger protein 415 2 2
MIRT563050 ZNF138 zinc finger protein 138 2 2
MIRT564307 CCNT1 cyclin T1 2 2
MIRT568333 BACH1 BTB domain and CNC homolog 1 2 2
MIRT570864 ZNF525 zinc finger protein 525 2 2
MIRT570874 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571516 ZNF625 zinc finger protein 625 2 2
MIRT572470 MTMR10 myotubularin related protein 10 2 2
MIRT572898 RUNDC3B RUN domain containing 3B 2 2
MIRT573084 APLN apelin 2 2
MIRT575251 Timp3 tissue inhibitor of metalloproteinase 3 2 2
MIRT575275 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 2 2
MIRT607230 LINS lines homolog 1 2 4
MIRT611803 FCRL4 Fc receptor like 4 2 2
MIRT612669 POU2F1 POU class 2 homeobox 1 2 4
MIRT612739 MYOCD myocardin 2 2
MIRT613409 CDH8 cadherin 8 2 4
MIRT614007 PAOX polyamine oxidase 2 2
MIRT615188 CLUAP1 clusterin associated protein 1 2 2
MIRT616497 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT616524 URM1 ubiquitin related modifier 1 2 2
MIRT617066 SPIB Spi-B transcription factor 2 2
MIRT617813 EMX2 empty spiracles homeobox 2 2 2
MIRT619291 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619375 KLHL12 kelch like family member 12 2 2
MIRT619499 TXLNB taxilin beta 2 2
MIRT619601 MKKS McKusick-Kaufman syndrome 2 2
MIRT619754 MYO1F myosin IF 2 2
MIRT619976 ZSCAN22 zinc finger and SCAN domain containing 22 2 2
MIRT620743 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT620871 KCTD7 potassium channel tetramerization domain containing 7 2 2
MIRT621380 CLNK cytokine dependent hematopoietic cell linker 2 2
MIRT621511 ZNF638 zinc finger protein 638 2 2
MIRT621537 ZNF500 zinc finger protein 500 2 2
MIRT621772 TMEM87B transmembrane protein 87B 2 2
MIRT622193 SLC5A12 solute carrier family 5 member 12 2 2
MIRT622319 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT622738 PITPNM3 PITPNM family member 3 2 2
MIRT622996 ONECUT3 one cut homeobox 3 2 2
MIRT625301 SHISA6 shisa family member 6 2 2
MIRT625637 KCNQ3 potassium voltage-gated channel subfamily Q member 3 2 2
MIRT627698 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT627751 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT628438 ANTXR2 anthrax toxin receptor 2 2 2
MIRT635440 SLC25A44 solute carrier family 25 member 44 2 2
MIRT637166 TMEM50A transmembrane protein 50A 2 2
MIRT638207 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT639288 TFAP2A transcription factor AP-2 alpha 2 4
MIRT639398 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT641230 SEMA3E semaphorin 3E 2 2
MIRT641501 STC2 stanniocalcin 2 2 2
MIRT642577 PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 2 2
MIRT642735 TDRD6 tudor domain containing 6 2 2
MIRT644001 PPP1R3G protein phosphatase 1 regulatory subunit 3G 2 2
MIRT644210 CBS cystathionine-beta-synthase 2 2
MIRT645405 FAM110A family with sequence similarity 110 member A 2 2
MIRT645685 TBC1D13 TBC1 domain family member 13 2 2
MIRT645699 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT645761 SURF6 surfeit 6 2 2
MIRT645826 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT645914 PLXNA3 plexin A3 2 2
MIRT646167 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646634 COA4 cytochrome c oxidase assembly factor 4 homolog 2 2
MIRT647547 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT648262 ZNF582 zinc finger protein 582 2 2
MIRT648385 ZNF22 zinc finger protein 22 2 2
MIRT648629 LEMD2 LEM domain containing 2 2 2
MIRT649353 SLC27A2 solute carrier family 27 member 2 2 2
MIRT649395 SH2D4A SH2 domain containing 4A 2 2
MIRT650241 CD68 CD68 molecule 2 2
MIRT650379 PTGIS prostaglandin I2 synthase 2 2
MIRT650705 KRT32 keratin 32 2 2
MIRT650854 UNC13D unc-13 homolog D 2 2
MIRT651042 ZNF644 zinc finger protein 644 2 2
MIRT651102 ZNF48 zinc finger protein 48 2 2
MIRT651130 ZNF398 zinc finger protein 398 2 2
MIRT652089 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT652200 TRIM33 tripartite motif containing 33 2 2
MIRT652422 TMEM239 transmembrane protein 239 2 2
MIRT652755 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT653201 SP9 Sp9 transcription factor 2 2
MIRT653338 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653715 SLC25A32 solute carrier family 25 member 32 2 2
MIRT654456 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT654499 RABIF RAB interacting factor 2 2
MIRT654678 PSMB5 proteasome subunit beta 5 2 2
MIRT655162 PHF20L1 PHD finger protein 20 like 1 2 2
MIRT655540 PADI2 peptidyl arginine deiminase 2 2 4
MIRT655850 NFE2L1 nuclear factor, erythroid 2 like 1 2 2
MIRT656248 MEX3A mex-3 RNA binding family member A 2 2
MIRT656581 LSAMP limbic system-associated membrane protein 2 2
MIRT657597 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT657824 GJD3 gap junction protein delta 3 2 2
MIRT658466 FAM102B family with sequence similarity 102 member B 2 2
MIRT659083 DENR density regulated re-initiation and release factor 2 2
MIRT659196 CYBB cytochrome b-245 beta chain 2 2
MIRT659558 CGGBP1 CGG triplet repeat binding protein 1 2 2
MIRT659860 CAPRIN1 cell cycle associated protein 1 2 2
MIRT660172 BNC2 basonuclin 2 2 2
MIRT660626 ANKRD52 ankyrin repeat domain 52 2 2
MIRT660917 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT660979 ABHD2 abhydrolase domain containing 2 2 2
MIRT661564 EPHX2 epoxide hydrolase 2 2 2
MIRT662214 CCRL2 C-C motif chemokine receptor like 2 2 2
MIRT662246 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT662560 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT662591 MAGEB4 MAGE family member B4 2 2
MIRT663294 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT663437 FBXO2 F-box protein 2 2 2
MIRT663811 RNF128 ring finger protein 128, E3 ubiquitin protein ligase 2 2
MIRT663821 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT665959 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT666115 SRRM4 serine/arginine repetitive matrix 4 2 2
MIRT667448 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT669330 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT669409 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669641 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT672663 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT673266 RUNDC1 RUN domain containing 1 2 2
MIRT676995 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT679290 SSBP2 single stranded DNA binding protein 2 2 2
MIRT687508 NCKAP1 NCK associated protein 1 2 2
MIRT698932 SPATA2 spermatogenesis associated 2 2 2
MIRT700852 PERP PERP, TP53 apoptosis effector 2 2
MIRT702426 KIAA1958 KIAA1958 2 2
MIRT703939 EPB41L1 erythrocyte membrane protein band 4.1 like 1 2 2
MIRT708962 SLC12A3 solute carrier family 12 member 3 2 2
MIRT709742 UBD ubiquitin D 2 2
MIRT709946 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT711121 CYYR1 cysteine and tyrosine rich 1 2 2
MIRT711217 RETSAT retinol saturase 2 2
MIRT711576 ASPA aspartoacylase 2 2
MIRT711599 LHX5 LIM homeobox 5 2 2
MIRT712232 RCC2 regulator of chromosome condensation 2 2 2
MIRT713317 TMEM44 transmembrane protein 44 2 2
MIRT713510 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT713543 GJB1 gap junction protein beta 1 2 2
MIRT713621 MED8 mediator complex subunit 8 2 2
MIRT714988 TSPAN11 tetraspanin 11 2 2
MIRT715449 PTCD1 pentatricopeptide repeat domain 1 2 2
MIRT715575 ATP5J2-PTCD1 ATP5J2-PTCD1 readthrough 2 2
MIRT715771 DDX42 DEAD-box helicase 42 2 2
MIRT715887 GNG2 G protein subunit gamma 2 2 2
MIRT716091 HARS histidyl-tRNA synthetase 2 2
MIRT717403 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT717965 PXMP4 peroxisomal membrane protein 4 2 2
MIRT718324 METTL7A methyltransferase like 7A 2 2
MIRT718628 DIP2A disco interacting protein 2 homolog A 2 2
MIRT719213 CAMK4 calcium/calmodulin dependent protein kinase IV 2 2
MIRT719234 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719817 LRRC4 leucine rich repeat containing 4 2 2
MIRT719978 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720480 TMEM178B transmembrane protein 178B 2 2
MIRT720713 RAPGEF6 Rap guanine nucleotide exchange factor 6 2 2
MIRT721006 ZNF619 zinc finger protein 619 2 2
MIRT721741 SDK2 sidekick cell adhesion molecule 2 2 2
MIRT723547 ZDHHC22 zinc finger DHHC-type containing 22 2 2
MIRT723596 FKRP fukutin related protein 2 2
MIRT723746 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT724784 C1D C1D nuclear receptor corepressor 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6867-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)

Error report submission