pre-miRNA Information
pre-miRNA hsa-mir-4778   
Genomic Coordinates chr2: 66358249 - 66358328
Description Homo sapiens miR-4778 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4778-3p
Sequence 51| UCUUCUUCCUUUGCAGAGUUGA |72
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs936001904 2 dbSNP
rs925922703 3 dbSNP
rs184768286 8 dbSNP
rs1249073833 10 dbSNP
rs977504360 13 dbSNP
rs192300002 18 dbSNP
Putative Targets

Gene Information
Gene Symbol TMEM151A   
Synonyms TMEM151
Description transmembrane protein 151A
Transcript NM_153266   
Expression
Putative miRNA Targets on TMEM151A
3'UTR of TMEM151A
(miRNA target sites are highlighted)
>TMEM151A|NM_153266|3'UTR
   1 GACCCCCCACGGCCCCCAGAGTGGCCCCCTCCCCACCATTCCACCATGGGCTTAGATGCCCGAGTGATTGTTGTCCAAAA
  81 CAGGCGGGAAAACAGACCAGCCACACACAAGGGGCAGGGGTGAGGGTGGGGGTGGGGGTCCTTAAACAGACTAAAATGCA
 161 GTTACCTGTGGTCATTTTGGAGGAAGTGGAAGCCTAAGAATCGCCCCCAGCATGGCTTCATCCCCCAAGATGGCCGATGA
 241 TCTGGCCTGAAGGCCTCTCACAAAGGGCAGGAGAAGAAGCTTCCAGAAAGGCTGGGATGGAGGAGGAGTCCTGCGGCCAG
 321 CTGTTGCCTGCAGCAGAGGCTGCCTGTGGACACTTCCCTACCGGGGCTGAGGCCATGCTGGGAGCCCCCCCAGTGACGCA
 401 GAAGCACAAATTGGAGGCTTGGGGCCATGCCCAGCCAGGTTGGCTTCCCTGGGGCTGAAGAGCTGGCTGTGGTGGCACCA
 481 TGGCCTTGGCCCTGCTACTCACCCAACATTCCCATCCTCCCCTGATAGGCCCCTCCTCCTTGCCTGCCCTCTCTCCCGCT
 561 GCTCAGGGCCAGTCACTCCCCCCACATGCAGCTACCCCTACAACCTGGGGTTCCTTCTCAGGGCCTCACCTGGTCCCCAC
 641 ATCCCCTGGCCTCTGCTCCTGCCTCCCAAAGTCCATGTCTGCCTCCATCAGCCACACACACGCAGGGACGCCCGTTCCTT
 721 GCCCTCCCGGACTTATCTACTCTTCACTTTCCTGATGATCCATGGGGCCCAGGCCTAGAGGGCATCCGAGGGGCTGGGCC
 801 TTGGCCACAGCCTCTTGGATGATGTCCTTGCTCCACCACGCAGGCCCTTGCTTCTCCCATCAACGAGTCTTGGCCCAGGG
 881 GACACTGACCCTCCCCCAGGGAGGAGAGAGGAGTTCCTTCCCTTTCAACGAGGGCTTCCACGCCCTCTAAGGGGTGGCGG
 961 GGAAGGGAGGAGGCTGAGAAGATGCAGATTAAATAAAGGTATGGAATGGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aguugagaCGUUUCCUUCUUCu 5'
                  |||:: ||||||| 
Target 5' cacaaaggGCAGGAGAAGAAGc 3'
259 - 280 154.00 -16.50
2
miRNA  3' agUUGAGAC--GU--UUCCUUCUUCu 5'
            | || ||  ||    |||:|||| 
Target 5' ttACCTGTGGTCATTTTGGAGGAAGt 3'
162 - 187 132.00 -12.10
3
miRNA  3' agUUGAGACGUUUCCUUCUUCu 5'
            ||  ||| :| |||:||:| 
Target 5' gaAAGGCTGGGATGGAGGAGGa 3'
286 - 307 132.00 -17.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM6408765 1 COSMIC
COSN31511375 7 COSMIC
COSN1136471 8 COSMIC
COSN20077570 11 COSMIC
COSN6407308 24 COSMIC
COSN8688104 30 COSMIC
COSN20077369 35 COSMIC
COSN30461398 63 COSMIC
COSN8688105 133 COSMIC
COSN28195939 135 COSMIC
COSN20077364 160 COSMIC
COSN20108419 392 COSMIC
COSN28830712 509 COSMIC
COSN30164484 654 COSMIC
COSN30545142 732 COSMIC
COSN31590599 840 COSMIC
COSN26508532 841 COSMIC
COSN31514760 841 COSMIC
COSN16326109 853 COSMIC
COSN30176188 931 COSMIC
COSN8584542 953 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1446275563 1 dbSNP
rs35383623 3 dbSNP
rs398045239 3 dbSNP
rs776322167 3 dbSNP
rs779141685 4 dbSNP
rs748180700 5 dbSNP
rs1312274002 7 dbSNP
rs758505934 9 dbSNP
rs1386798206 10 dbSNP
rs780982894 11 dbSNP
rs745872747 12 dbSNP
rs1473036043 13 dbSNP
rs775464809 14 dbSNP
rs1386871652 15 dbSNP
rs202153429 17 dbSNP
rs1335389559 20 dbSNP
rs1010442511 22 dbSNP
rs774159753 23 dbSNP
rs759116079 25 dbSNP
rs1292148309 26 dbSNP
rs761161763 27 dbSNP
rs1208558136 30 dbSNP
rs1360846025 31 dbSNP
rs906892567 32 dbSNP
rs1204945903 33 dbSNP
rs1286111210 34 dbSNP
rs767121571 37 dbSNP
rs1265905097 39 dbSNP
rs1002556631 40 dbSNP
rs866647550 43 dbSNP
rs1034245027 47 dbSNP
rs773580544 49 dbSNP
rs1280568038 52 dbSNP
rs1185927395 54 dbSNP
rs1244362258 62 dbSNP
rs958619033 63 dbSNP
rs1445672386 66 dbSNP
rs139505861 68 dbSNP
rs796234739 69 dbSNP
rs935202876 71 dbSNP
rs1026859214 73 dbSNP
rs1056379401 75 dbSNP
rs1462709713 79 dbSNP
rs535648639 84 dbSNP
rs1175752658 86 dbSNP
rs1403960015 87 dbSNP
rs1180216309 93 dbSNP
rs928038001 97 dbSNP
rs1476649904 104 dbSNP
rs555723094 105 dbSNP
rs1181662349 106 dbSNP
rs369656877 108 dbSNP
rs1337297263 113 dbSNP
rs1192891141 115 dbSNP
rs1361268300 117 dbSNP
rs1255293934 121 dbSNP
rs939436961 122 dbSNP
rs1215116425 123 dbSNP
rs1380244047 124 dbSNP
rs1288483125 129 dbSNP
rs1226157082 131 dbSNP
rs983968272 132 dbSNP
rs1012018582 133 dbSNP
rs1023361039 134 dbSNP
rs1362680325 134 dbSNP
rs976109830 137 dbSNP
rs1394064629 139 dbSNP
rs1162728842 142 dbSNP
rs1411774017 146 dbSNP
rs898222931 151 dbSNP
rs1167778122 158 dbSNP
rs1448219946 163 dbSNP
rs995142502 165 dbSNP
rs181271106 166 dbSNP
rs1194692374 172 dbSNP
rs951076875 173 dbSNP
rs1245819643 177 dbSNP
rs1218728458 178 dbSNP
rs1260906521 181 dbSNP
rs1273101831 183 dbSNP
rs558104599 187 dbSNP
rs987493955 192 dbSNP
rs1054552469 199 dbSNP
rs1019851026 201 dbSNP
rs1367138862 204 dbSNP
rs964583140 204 dbSNP
rs975555241 208 dbSNP
rs914671962 214 dbSNP
rs1355132996 222 dbSNP
rs947417165 225 dbSNP
rs566708942 236 dbSNP
rs1328301767 237 dbSNP
rs538448440 241 dbSNP
rs1397476964 252 dbSNP
rs1174631663 253 dbSNP
rs369016811 254 dbSNP
rs1424027784 256 dbSNP
rs938685501 262 dbSNP
rs1056811672 268 dbSNP
rs1232902923 269 dbSNP
rs1481457058 272 dbSNP
rs896382680 276 dbSNP
rs947904512 285 dbSNP
rs1482014394 288 dbSNP
rs1282443756 308 dbSNP
rs1211311625 309 dbSNP
rs1044843980 313 dbSNP
rs1174245614 314 dbSNP
rs185860561 316 dbSNP
rs1002914546 326 dbSNP
rs574032930 330 dbSNP
rs1025383618 332 dbSNP
rs1408132504 338 dbSNP
rs190284478 342 dbSNP
rs1007873974 343 dbSNP
rs1020303734 344 dbSNP
rs964259222 346 dbSNP
rs372156407 350 dbSNP
rs1404156869 355 dbSNP
rs951258737 359 dbSNP
rs975585054 363 dbSNP
rs1347016786 364 dbSNP
rs1180792020 365 dbSNP
rs1015381603 372 dbSNP
rs1259522171 374 dbSNP
rs1188480767 376 dbSNP
rs562553433 378 dbSNP
rs531392854 380 dbSNP
rs968870140 381 dbSNP
rs977533504 382 dbSNP
rs376568639 383 dbSNP
rs35758463 385 dbSNP
rs575263122 385 dbSNP
rs1226645551 386 dbSNP
rs924703411 387 dbSNP
rs1357376281 390 dbSNP
rs953613970 392 dbSNP
rs543866188 398 dbSNP
rs758972510 399 dbSNP
rs1454677432 410 dbSNP
rs1388897284 413 dbSNP
rs1158043829 414 dbSNP
rs946182882 420 dbSNP
rs1419331317 431 dbSNP
rs551200520 439 dbSNP
rs1266958599 449 dbSNP
rs1041893869 451 dbSNP
rs917835713 455 dbSNP
rs564670330 463 dbSNP
rs1423147127 466 dbSNP
rs1254063385 470 dbSNP
rs947935677 472 dbSNP
rs1191792733 474 dbSNP
rs527271005 482 dbSNP
rs1417444480 485 dbSNP
rs919793797 490 dbSNP
rs894174420 495 dbSNP
rs547034261 496 dbSNP
rs1273845201 498 dbSNP
rs79790477 509 dbSNP
rs535754216 510 dbSNP
rs1298445587 512 dbSNP
rs886836873 519 dbSNP
rs574071533 522 dbSNP
rs1383119697 523 dbSNP
rs12418822 531 dbSNP
rs1040676944 543 dbSNP
rs559608697 546 dbSNP
rs1367002577 553 dbSNP
rs900087005 553 dbSNP
rs997581920 557 dbSNP
rs569372528 558 dbSNP
rs115649492 561 dbSNP
rs1366640864 572 dbSNP
rs1370514136 577 dbSNP
rs1389269647 578 dbSNP
rs1186475793 579 dbSNP
rs968900586 580 dbSNP
rs990127416 583 dbSNP
rs557955695 584 dbSNP
rs770310001 586 dbSNP
rs1228715276 587 dbSNP
rs180689090 596 dbSNP
rs993241622 605 dbSNP
rs1245626512 611 dbSNP
rs534182727 618 dbSNP
rs1372715199 620 dbSNP
rs1323881743 623 dbSNP
rs757881063 626 dbSNP
rs938398658 632 dbSNP
rs554250448 635 dbSNP
rs1430283673 650 dbSNP
rs573944829 652 dbSNP
rs1369917406 659 dbSNP
rs1166459815 677 dbSNP
rs1455466462 679 dbSNP
rs542563002 683 dbSNP
rs562665771 689 dbSNP
rs141447622 698 dbSNP
rs919824451 700 dbSNP
rs931165691 702 dbSNP
rs1046864199 703 dbSNP
rs1048097870 704 dbSNP
rs908295680 706 dbSNP
rs1483004599 708 dbSNP
rs528742273 710 dbSNP
rs943762536 711 dbSNP
rs545215276 713 dbSNP
rs899531464 714 dbSNP
rs545274468 715 dbSNP
rs1043350262 719 dbSNP
rs1409953958 724 dbSNP
rs1349782273 725 dbSNP
rs565448247 729 dbSNP
rs1436504987 730 dbSNP
rs1402568800 737 dbSNP
rs768596022 740 dbSNP
rs904748970 750 dbSNP
rs1171802440 751 dbSNP
rs1464695721 753 dbSNP
rs1365817396 759 dbSNP
rs527423647 761 dbSNP
rs1472345824 763 dbSNP
rs1029010688 764 dbSNP
rs1352469941 768 dbSNP
rs763527013 788 dbSNP
rs546947580 789 dbSNP
rs1014374982 793 dbSNP
rs1298264117 794 dbSNP
rs138799328 805 dbSNP
rs1022992654 810 dbSNP
rs1342407853 813 dbSNP
rs1021663121 815 dbSNP
rs1228467704 818 dbSNP
rs781674583 825 dbSNP
rs1351842677 829 dbSNP
rs970054976 837 dbSNP
rs1378234822 838 dbSNP
rs1452587565 839 dbSNP
rs1341023346 840 dbSNP
rs973352895 841 dbSNP
rs1313601178 846 dbSNP
rs1026870384 847 dbSNP
rs560553734 853 dbSNP
rs983022611 865 dbSNP
rs56911128 866 dbSNP
rs1473395606 876 dbSNP
rs1272552435 879 dbSNP
rs943858435 882 dbSNP
rs976554751 887 dbSNP
rs920993852 890 dbSNP
rs560970418 892 dbSNP
rs1328072352 893 dbSNP
rs376368624 902 dbSNP
rs1265649555 914 dbSNP
rs1042712070 915 dbSNP
rs150862306 919 dbSNP
rs879223274 923 dbSNP
rs569568328 930 dbSNP
rs1258835080 931 dbSNP
rs774555879 935 dbSNP
rs538034489 938 dbSNP
rs552052022 942 dbSNP
rs186178963 943 dbSNP
rs1434599746 945 dbSNP
rs3179108 948 dbSNP
rs1386781125 951 dbSNP
rs1023023600 952 dbSNP
rs534300385 955 dbSNP
rs1416876854 958 dbSNP
rs1411323176 959 dbSNP
rs554164599 960 dbSNP
rs1476682128 970 dbSNP
rs1391117150 982 dbSNP
rs1188362175 984 dbSNP
rs939921698 995 dbSNP
rs1245877419 998 dbSNP
rs560577 1003 dbSNP
rs901116825 1004 dbSNP
rs1288543409 1009 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aguugagacguuucCUUCUUCu 5'
                        ||||||| 
Target 5' -------------aGAAGAAGc 3'
1 - 9
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000327259.4 | 3UTR | AGAAGAAGCUUCCAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
169 hsa-miR-4778-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT199338 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 4
MIRT203028 MAP3K2 mitogen-activated protein kinase kinase kinase 2 2 2
MIRT260646 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT336468 SRP9 signal recognition particle 9 2 2
MIRT389212 SERTAD2 SERTA domain containing 2 2 2
MIRT441814 TENM1 teneurin transmembrane protein 1 2 2
MIRT444029 GREM1 gremlin 1, DAN family BMP antagonist 2 4
MIRT454171 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT469663 RABEPK Rab9 effector protein with kelch motifs 2 2
MIRT495579 PLEKHA8 pleckstrin homology domain containing A8 2 2
MIRT498340 PRELID2 PRELI domain containing 2 2 2
MIRT498696 LYRM2 LYR motif containing 2 2 6
MIRT504156 OPN5 opsin 5 2 4
MIRT506321 OTUD4 OTU deubiquitinase 4 2 4
MIRT507608 DCAF7 DDB1 and CUL4 associated factor 7 2 2
MIRT525431 PROX2 prospero homeobox 2 2 2
MIRT526973 PAX7 paired box 7 2 2
MIRT527814 TMEM74B transmembrane protein 74B 2 2
MIRT527960 MTAP methylthioadenosine phosphorylase 2 2
MIRT528083 NOL9 nucleolar protein 9 2 2
MIRT528480 STAMBPL1 STAM binding protein like 1 2 2
MIRT528947 PNMA5 paraneoplastic Ma antigen family member 5 2 2
MIRT530687 C8orf46 chromosome 8 open reading frame 46 2 2
MIRT531733 SLC2A9 solute carrier family 2 member 9 2 2
MIRT532445 PLGRKT plasminogen receptor with a C-terminal lysine 2 2
MIRT533331 UNK unkempt family zinc finger 2 2
MIRT534205 SLC38A9 solute carrier family 38 member 9 2 2
MIRT534322 SHISA6 shisa family member 6 2 2
MIRT535197 PLCL1 phospholipase C like 1 (inactive) 2 2
MIRT538076 DIAPH2 diaphanous related formin 2 2 2
MIRT539250 ANKRD50 ankyrin repeat domain 50 2 2
MIRT548733 CREBRF CREB3 regulatory factor 2 2
MIRT556406 LRRC8B leucine rich repeat containing 8 VRAC subunit B 2 2
MIRT559576 AP1AR adaptor related protein complex 1 associated regulatory protein 2 2
MIRT567661 ERGIC2 ERGIC and golgi 2 2 2
MIRT572750 FAM204A family with sequence similarity 204 member A 2 2
MIRT609355 ZNF664 zinc finger protein 664 2 2
MIRT611194 TMEM105 transmembrane protein 105 2 2
MIRT611545 BIRC5 baculoviral IAP repeat containing 5 2 4
MIRT611690 NODAL nodal growth differentiation factor 2 2
MIRT611810 FCRL4 Fc receptor like 4 2 2
MIRT612746 MYOCD myocardin 2 2
MIRT614177 FAM53B family with sequence similarity 53 member B 2 2
MIRT614431 TAZ tafazzin 2 2
MIRT614586 SDC1 syndecan 1 2 2
MIRT615547 TNFSF15 TNF superfamily member 15 2 2
MIRT615872 BRD3 bromodomain containing 3 2 2
MIRT615970 ASCL1 achaete-scute family bHLH transcription factor 1 2 2
MIRT616024 PRRG4 proline rich and Gla domain 4 2 4
MIRT616242 NFIC nuclear factor I C 2 2
MIRT616282 HMGB1 high mobility group box 1 2 2
MIRT616674 PRR15 proline rich 15 2 2
MIRT618302 COL4A4 collagen type IV alpha 4 chain 2 2
MIRT618657 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT618754 SLC38A5 solute carrier family 38 member 5 2 2
MIRT619505 TXLNB taxilin beta 2 2
MIRT619545 GABRG2 gamma-aminobutyric acid type A receptor gamma2 subunit 2 2
MIRT619605 MKKS McKusick-Kaufman syndrome 2 2
MIRT619804 CDC42EP4 CDC42 effector protein 4 2 2
MIRT619923 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT620442 SEMA3E semaphorin 3E 2 4
MIRT620730 CCL16 C-C motif chemokine ligand 16 2 2
MIRT625345 TAPBP TAP binding protein 2 2
MIRT627510 ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 2 2
MIRT632584 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT636901 RABGAP1L RAB GTPase activating protein 1 like 2 2
MIRT637873 UTP6 UTP6, small subunit processome component 2 2
MIRT639011 ABI2 abl interactor 2 2 2
MIRT639054 FPR1 formyl peptide receptor 1 2 2
MIRT639085 ADCYAP1 adenylate cyclase activating polypeptide 1 2 2
MIRT639589 RGS5 regulator of G protein signaling 5 2 2
MIRT639718 NPRL3 NPR3 like, GATOR1 complex subunit 2 2
MIRT639904 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT640392 ZNF785 zinc finger protein 785 2 2
MIRT640786 GRIK3 glutamate ionotropic receptor kainate type subunit 3 2 2
MIRT641290 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT641442 PELO pelota mRNA surveillance and ribosome rescue factor 2 2
MIRT642426 STAT3 signal transducer and activator of transcription 3 2 2
MIRT642682 KRT74 keratin 74 2 2
MIRT643362 TRIM10 tripartite motif containing 10 2 2
MIRT643982 DUSP28 dual specificity phosphatase 28 2 2
MIRT644466 ZNF747 zinc finger protein 747 2 2
MIRT644561 SPOP speckle type BTB/POZ protein 2 2
MIRT645748 FAM213A family with sequence similarity 213 member A 2 2
MIRT646737 FADS1 fatty acid desaturase 1 2 2
MIRT647446 SIX6 SIX homeobox 6 2 2
MIRT648317 SCNN1G sodium channel epithelial 1 gamma subunit 2 2
MIRT649327 POLG DNA polymerase gamma, catalytic subunit 2 2
MIRT649453 WDR70 WD repeat domain 70 2 2
MIRT650066 CCDC134 coiled-coil domain containing 134 2 2
MIRT650156 JUND JunD proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT650317 TMX4 thioredoxin related transmembrane protein 4 2 2
MIRT650429 BBS9 Bardet-Biedl syndrome 9 2 2
MIRT651325 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT651843 USP13 ubiquitin specific peptidase 13 2 2
MIRT652532 TM9SF3 transmembrane 9 superfamily member 3 2 2
MIRT652816 TARDBP TAR DNA binding protein 2 2
MIRT652971 SUN2 Sad1 and UNC84 domain containing 2 2 2
MIRT653466 SLC5A12 solute carrier family 5 member 12 2 4
MIRT653568 SLC35B3 solute carrier family 35 member B3 2 2
MIRT655678 NUMBL NUMB like, endocytic adaptor protein 2 2
MIRT656785 KPNA4 karyopherin subunit alpha 4 2 2
MIRT656798 KNTC1 kinetochore associated 1 2 2
MIRT656988 KDM5A lysine demethylase 5A 2 2
MIRT657292 HOXB5 homeobox B5 2 2
MIRT657497 HBEGF heparin binding EGF like growth factor 2 4
MIRT658012 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT658146 STXBP2 syntaxin binding protein 2 2 2
MIRT658259 FAXC failed axon connections homolog 2 2
MIRT659051 DGKH diacylglycerol kinase eta 2 2
MIRT659171 DCTN3 dynactin subunit 3 2 2
MIRT659936 CACHD1 cache domain containing 1 2 2
MIRT660079 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT660167 BNIP3L BCL2 interacting protein 3 like 2 2
MIRT660292 BICC1 BicC family RNA binding protein 1 2 2
MIRT660317 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT660340 BCAT1 branched chain amino acid transaminase 1 2 2
MIRT660447 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 2 2
MIRT661634 UGT2B28 UDP glucuronosyltransferase family 2 member B28 2 2
MIRT662438 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT664202 TBCA tubulin folding cofactor A 2 2
MIRT666436 SH2B3 SH2B adaptor protein 3 2 2
MIRT666666 RBM47 RNA binding motif protein 47 2 4
MIRT669253 C4orf36 chromosome 4 open reading frame 36 2 2
MIRT669502 ARL3 ADP ribosylation factor like GTPase 3 2 2
MIRT693912 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT700435 PURB purine rich element binding protein B 2 2
MIRT702857 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT708857 TMSB4X thymosin beta 4, X-linked 2 2
MIRT709030 KBTBD13 kelch repeat and BTB domain containing 13 2 2
MIRT709609 CXorf23 BCLAF1 and THRAP3 family member 3 2 2
MIRT709810 AR androgen receptor 2 2
MIRT709872 A1CF APOBEC1 complementation factor 2 2
MIRT710208 ENAH ENAH, actin regulator 2 2
MIRT710964 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT711173 EMCN endomucin 2 2
MIRT711219 RETSAT retinol saturase 2 2
MIRT711345 FMNL2 formin like 2 2 2
MIRT711441 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT711631 PEBP1 phosphatidylethanolamine binding protein 1 2 2
MIRT711823 MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 2 2
MIRT712164 SURF4 surfeit 4 2 2
MIRT712632 RNF103-CHMP3 RNF103-CHMP3 readthrough 2 2
MIRT713692 CYB5R4 cytochrome b5 reductase 4 2 2
MIRT714906 CHMP3 charged multivesicular body protein 3 2 2
MIRT715161 FIG4 FIG4 phosphoinositide 5-phosphatase 2 2
MIRT715430 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT715660 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT715968 FADS3 fatty acid desaturase 3 2 2
MIRT716203 TYW3 tRNA-yW synthesizing protein 3 homolog 2 2
MIRT716234 SRSF12 serine and arginine rich splicing factor 12 2 2
MIRT716251 PALM2 paralemmin 2 2 2
MIRT716375 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT716490 PHACTR2 phosphatase and actin regulator 2 2 2
MIRT716744 APOL6 apolipoprotein L6 2 2
MIRT717624 AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 2 2
MIRT718480 TMEM151A transmembrane protein 151A 2 2
MIRT718805 PRKCB protein kinase C beta 2 2
MIRT719276 SETD7 SET domain containing lysine methyltransferase 7 2 2
MIRT719432 NPTX2 neuronal pentraxin 2 2 2
MIRT721011 ZNF619 zinc finger protein 619 2 2
MIRT721819 HEATR5A HEAT repeat containing 5A 2 2
MIRT721997 CLLU1OS chronic lymphocytic leukemia up-regulated 1 opposite strand 2 2
MIRT723143 METTL24 methyltransferase like 24 2 2
MIRT723213 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT723427 MC2R melanocortin 2 receptor 2 2
MIRT723436 ADI1 acireductone dioxygenase 1 2 2
MIRT723542 PAGR1 PAXIP1 associated glutamate rich protein 1 2 2
MIRT724474 MMD monocyte to macrophage differentiation associated 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4778-3p Platinum 23939 sensitive tissue (non-small cell lung cancer)
hsa-miR-4778-3p Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)

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