pre-miRNA Information
pre-miRNA hsa-mir-4524a   
Genomic Coordinates chr17: 69099564 - 69099632
Description Homo sapiens miR-4524a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4524a-5p
Sequence 6| AUAGCAGCAUGAACCUGUCUCA |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1322445998 8 dbSNP
rs1350790266 13 dbSNP
rs1263495678 21 dbSNP
Putative Targets

Gene Information
Gene Symbol UTP15   
Synonyms NET21
Description UTP15, small subunit processome component
Transcript NM_032175   
Expression
Putative miRNA Targets on UTP15
3'UTR of UTP15
(miRNA target sites are highlighted)
>UTP15|NM_032175|3'UTR
   1 TGTCTGCTAAATAAGACATATAAGAACTCTGAAGTTGGAATAGATTTGACTGTATTAAATGTTGGCGAGAGACTCTCTTT
  81 GATACATTAAAAAAACTGTTTGCAGAAGCAGTTCTGTGGAAGAGACTGGAATAATTATGGCCGGAAAACAAGTACCCGTT
 161 TTAAGTAAGACATGGTTTTCCATGTAATATTTTGAATTATAGCATCTTCACCTAGAAGATCTCAATTGTCTTAGTCACAG
 241 AGTAGGTTTATCTGGGATGGATATTAATTTTAATACAGGAGTGTTCTGTATCAACATTTGGGTTGGTATTCAGATGGGAA
 321 TTCAAATATGAATCCTCTCTGGAGAGGGTCCAACTGGGAATCCTGCTAAAGGAGCAAAGCCTTGTATTACCTCTGGAAGA
 401 CAACAAAAACAATTGGCAACAACAAAAAGCCTCTTTCTTGACTTTAATCAGTGCCTTTGGGATTTCTAGGCCCTTGCTTA
 481 GCTTGCTTCCTGTCTCCTTGATATCTACACTTGTCTTAGATCACATGCCCTGCTTCAGCTGGTAATGGGACTGCATCGGT
 561 TCCAAGTGTGGCAAGTAAGTTTTCGGCTCTGAAGAACTGACACTAGCTAGATTTGTATTCAGAGTGTGAGAGCAAGCTCT
 641 ACAGATAGACCTTATTGGACTACTTTTTTTTTTTTCTTCATGCAGCCTTTCTACCAAGTTTTCACCTTGTTTCAGGTCAG
 721 AGGAATGATAGAATTTGTCATTTTTCTTACAACAGCCTTTCAGACTATTCTTCATATGTTTCAAGCTAATCTTGTAGCTA
 801 AGCTACCTAATCCTCTGAAAACTGTTTTCTCTGATTTGTATTTAGATTCCTCCCCCCATTATTCACAATCATATTGTATT
 881 TCGGAACCCCAATGCAGAGCAGTTTGCTTTGAAAAATAGTTGTTTTTAAAAGTTTAATGTAAATAATTATTTTTTAGAAG
 961 TTTTTTTTTTTTTTTTAAAGACAGGGTCTCGCTTTATCGCCCAGGCTGGAGTACAGTGATGCAATCTCAGTCCACTGCAA
1041 CCTCTGCCCTCCCGGGTTTAAGCAGTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCCCCACCACGCC
1121 TGGCTAATTTTTGTAGTTTTAGTAGAGACGGGGTTTCACCTTACCGGGCTGGTCTAAAACTCCTGACCTCAAGTGATCTA
1201 CCTGCCTCTGCCTCCCGAAGTGCTTGGATTACAGGTGTGAGCCACTGTGTCCAGCCTGTAACTATTATTTTTTTATAAAG
1281 AGAGATTCTTATTTTCTTGGCTTTTTGATGTATCTGTTCCTGATAGATAATCATTGGCTAGTAACTCCTAGTACACTGGT
1361 TTCACAGTTGCTACCTCTCCTGCTTTTCTCTAATTATTACGCCAACTCAAGTAGTTAAAAATCAGTAAGAAAAATGTCTT
1441 GAGCTAGAAGAACCCATAGAGGAAGATTTTGTAATGCGAATCTCCTCTCATAATTTTAGTTCTGTAAATTCAGGGTTTTT
1521 TTTTGTTTTTTTGTTTTTTTTAAGCCGAAAAAATGCTTAATATGTTCCAGTAAGGGTATTAAGTAAAAATTAAATAAACG
1601 TATTAAGTTTAACATATTAAATTAATTTAACATTTAGACTAACATTAACATTTAAATTAATATGTTAAGTGAATATACTT
1681 AATATATTCTAGTACAGGTATGCTTGGAAATAGGGCGTTTCCTTTTCATGAATTGATTTCGTACAGCACAGTGGCTTATA
1761 AGGAACCAGCAGTGTTTTTCCCTGAGTAATTATGAACTTAGTCAAGATCAGAAGCTGGGTTTTGGGGTTGAGAAGAGTTC
1841 ATTTATTTAAATAAAGTTTCTATTTAAAAACCTTTTTAAAAAGTTAACATCATAAATATTCTGATAATTTGCATAGTAGT
1921 AAAAATTAGAAGTTGAAATTCTACCTAAAGCTGTAGTTGCCGTCAATTGTGTAACATGTGACAAAGGTTTTCCCATATGT
2001 CATTTCATTTGATTCTCACCACAACCATCCAAGGTTGATGTTATTCTCATTTAACATTGAGTTAACGAAAGTAGTTGATT
2081 CACTCTCGAAGTCCCTGAGTGTGAGCTCTTCATCCTAGCACTGTGAAGTGGTTTGCCTGCTGGGGCCTAAACTCCTCATT
2161 CCCTTTAACAAAGCTTCACTGAGTGCTGCAGTTCTCAAAATATGTAACAGTTAACACATTTTTCAAACAGGTTAGGAAGC
2241 AATTCCCATAGCCATCAATACTTAAATTCAGGAGTACTTTTTTGTTTGTTTGTTTTGTTTTGTTTTTAGAGACAAGGTCT
2321 CTTTCTGTTGTCCAGGCTGGAGTGTAGTGGTGTGATCATAGCTCACTGCAGCTTCTGTCTCCTAGGCTGAAGCTATCCTC
2401 CCACCTCAGCCTCCTGAGAAGCTGGGGCTACAGGGATGAGCCACCATGCCCAGCTAATTTTTTATTTTGATTTTTTGAGA
2481 TAAGAGGTCTCACCATGTTGCCCAGGCCTGAGGCAATCTCCTGGTTTCAAGCAATCTTCCCACCTCAGCCTCCTTAATGA
2561 CTGGGATTAAAGGCATGAGCCACTGCGCCCAGCAGGAATGGTTATTATATTCATTGAGATAAACTGTAGTATTTGCTGTT
2641 TGAAGTATTTAAACATAATTGGCATATTACAATATGTGACACTGGCCTTAAGATTCTAATTTAAAATGCTTAACAGACTT
2721 TTAGACTTATGAGTTTCAGTTGAAAGGTATTTTAAAATGTTACTAAGTCTGCAAAAGTACTGAAATGTTTCAGAGAACTT
2801 GGAAAGTCACCGTATGTTTAATTTATTATGTTTATGAGATTTAAGCACTTGGGAAGGTTTATGCTAATGGGGTCAAGCAT
2881 TTGCAATGCTGCTTAAAAGAATCATTTTTTTAAATGTATAAATGCTATTAAGTTGTTTAAAGGAATTTGAATTGTAAATG
2961 GGATTGTTAAAACAAATTTAGTCTGTTCAACTCAATGAGGGCATTTCATTTTCTAGGAACAAAATACCCTCTTAGACATT
3041 AAAAAGCCGCATGCCTGTTCCCTCAGCTATAGTTAACTGGACCATGGTGGTACAACTGACTCAACCCTTCTCTAAGCAGG
3121 GATTTGTAATTGGGATTTATAATGAAATTCCTGATCTGGGAAAATGGGAGGCTGGGAATGCTATGTCTAGGTCATCAGCG
3201 GAGAAAGTTGGTTTGTAGAGAATGAACAAGAATGAAACCTAAGTGCAAAGAAAATAAAGATTATCCTGCTTTAATAGTTC
3281 AGA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acUCUGUCC-AAGU-ACGACGAUa 5'
            | || || ||||  |:||||| 
Target 5' gtACACTGGTTTCACAGTTGCTAc 3'
1351 - 1374 144.00 -11.40
2
miRNA  3' acUCUGUCCAAG-UACGACGAua 5'
            | :||  | | ||||||||  
Target 5' tcAAGCATTTGCAATGCTGCTta 3'
2873 - 2895 136.00 -10.40
3
miRNA  3' acUCUGUCCAAG---------UACGACGAUa 5'
            :|| ||| ||         || |||||| 
Target 5' ctGGAGAGGGTCCAACTGGGAATCCTGCTAa 3'
339 - 369 124.00 -15.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31509115 4 COSMIC
COSN26670727 16 COSMIC
COSN14178036 67 COSMIC
COSN30118950 96 COSMIC
COSN16215557 117 COSMIC
COSN20075393 144 COSMIC
COSN17183283 159 COSMIC
COSN16205846 201 COSMIC
COSN2116720 676 COSMIC
COSN27305306 676 COSMIC
COSN2116721 787 COSMIC
COSN9956544 915 COSMIC
COSN20101360 977 COSMIC
COSN9956545 1177 COSMIC
COSN21142791 1457 COSMIC
COSN8228959 1517 COSMIC
COSN25477939 1530 COSMIC
COSN25477940 1542 COSMIC
COSN20374605 1663 COSMIC
COSN20101361 1664 COSMIC
COSN9456550 2287 COSMIC
COSN26610865 2595 COSMIC
COSN7579147 2913 COSMIC
COSN14756099 3050 COSMIC
COSN16207227 3166 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs769046591 2 dbSNP
rs774747198 4 dbSNP
rs376764935 10 dbSNP
rs1245634644 12 dbSNP
rs766209850 16 dbSNP
rs776278321 17 dbSNP
rs1033354464 21 dbSNP
rs759587950 22 dbSNP
rs371345501 28 dbSNP
rs1159869746 30 dbSNP
rs752255499 36 dbSNP
rs757929383 37 dbSNP
rs763552405 39 dbSNP
rs1349502091 40 dbSNP
rs1437359938 41 dbSNP
rs751213943 42 dbSNP
rs1339154781 43 dbSNP
rs756798738 44 dbSNP
rs781663087 45 dbSNP
rs1320370290 46 dbSNP
rs373358747 47 dbSNP
rs1288780697 51 dbSNP
rs1378765698 52 dbSNP
rs530015123 63 dbSNP
rs1445027663 66 dbSNP
rs548461066 67 dbSNP
rs1027878895 68 dbSNP
rs1304092050 69 dbSNP
rs1349851161 72 dbSNP
rs1215321587 84 dbSNP
rs951023022 87 dbSNP
rs983662832 90 dbSNP
rs1350842350 95 dbSNP
rs1293575805 102 dbSNP
rs968575130 104 dbSNP
rs1341455252 109 dbSNP
rs1434914184 111 dbSNP
rs343120 117 dbSNP
rs927109828 118 dbSNP
rs376635373 133 dbSNP
rs868078425 143 dbSNP
rs1399553143 144 dbSNP
rs1361790939 150 dbSNP
rs1358635141 157 dbSNP
rs974757443 158 dbSNP
rs1425484803 159 dbSNP
rs1367711455 173 dbSNP
rs1292187418 174 dbSNP
rs185918618 179 dbSNP
rs343119 201 dbSNP
rs1192846714 203 dbSNP
rs571602024 205 dbSNP
rs935987494 211 dbSNP
rs1222794881 219 dbSNP
rs115764750 222 dbSNP
rs1451182228 226 dbSNP
rs915184846 229 dbSNP
rs537524477 232 dbSNP
rs1309630741 237 dbSNP
rs941575967 243 dbSNP
rs945285236 245 dbSNP
rs1399877035 247 dbSNP
rs1304992351 254 dbSNP
rs112432809 263 dbSNP
rs1390354561 280 dbSNP
rs531792578 282 dbSNP
rs899995578 285 dbSNP
rs1169889234 287 dbSNP
rs1404164633 289 dbSNP
rs73117987 295 dbSNP
rs1054860345 316 dbSNP
rs1199562342 318 dbSNP
rs890180337 321 dbSNP
rs1318573844 322 dbSNP
rs759767968 329 dbSNP
rs1481833349 335 dbSNP
rs1010327835 339 dbSNP
rs1453643457 341 dbSNP
rs1284636319 345 dbSNP
rs1218599030 346 dbSNP
rs765712994 351 dbSNP
rs994543182 353 dbSNP
rs1027716884 354 dbSNP
rs951029966 355 dbSNP
rs1234130261 357 dbSNP
rs1330591177 363 dbSNP
rs968627582 365 dbSNP
rs1226346048 366 dbSNP
rs1005510105 382 dbSNP
rs978634395 387 dbSNP
rs1034178803 392 dbSNP
rs958528701 400 dbSNP
rs1408269545 405 dbSNP
rs776057999 413 dbSNP
rs1173073994 415 dbSNP
rs1477413004 423 dbSNP
rs966156373 430 dbSNP
rs1375375150 434 dbSNP
rs974811476 439 dbSNP
rs1419265256 440 dbSNP
rs550167784 441 dbSNP
rs1237158772 442 dbSNP
rs992636051 443 dbSNP
rs1286288113 448 dbSNP
rs922048835 451 dbSNP
rs1201457547 453 dbSNP
rs930053463 456 dbSNP
rs1273101480 470 dbSNP
rs1241481867 479 dbSNP
rs868230539 483 dbSNP
rs1245643630 485 dbSNP
rs983211943 486 dbSNP
rs909872188 491 dbSNP
rs1334764986 505 dbSNP
rs867018629 510 dbSNP
rs1462421540 511 dbSNP
rs536962452 523 dbSNP
rs1159837599 524 dbSNP
rs1419750581 526 dbSNP
rs957666137 528 dbSNP
rs1176393517 529 dbSNP
rs990205392 530 dbSNP
rs934163729 543 dbSNP
rs1188878964 554 dbSNP
rs1160604817 558 dbSNP
rs913216653 563 dbSNP
rs763375603 571 dbSNP
rs1042289610 582 dbSNP
rs927800711 585 dbSNP
rs537419240 586 dbSNP
rs1157093724 587 dbSNP
rs553279716 588 dbSNP
rs1238174521 599 dbSNP
rs1054954557 602 dbSNP
rs894919565 603 dbSNP
rs1333775162 604 dbSNP
rs1338878986 612 dbSNP
rs1284533046 621 dbSNP
rs1446981763 627 dbSNP
rs573190106 632 dbSNP
rs1019935354 636 dbSNP
rs904187805 642 dbSNP
rs1281041856 654 dbSNP
rs1000107909 660 dbSNP
rs1034231085 664 dbSNP
rs1416451234 664 dbSNP
rs1351085643 676 dbSNP
rs78230777 676 dbSNP
rs1227698047 677 dbSNP
rs1265768614 679 dbSNP
rs1325076375 680 dbSNP
rs1200470973 681 dbSNP
rs930388233 687 dbSNP
rs993083060 690 dbSNP
rs1440296160 691 dbSNP
rs144775278 695 dbSNP
rs1184470921 707 dbSNP
rs1488667379 719 dbSNP
rs1024124589 720 dbSNP
rs1233788431 722 dbSNP
rs1214766124 734 dbSNP
rs1048727484 750 dbSNP
rs886064630 751 dbSNP
rs1353990118 758 dbSNP
rs13168040 764 dbSNP
rs1432015150 768 dbSNP
rs962709076 771 dbSNP
rs975379257 774 dbSNP
rs1019124910 775 dbSNP
rs1295768737 777 dbSNP
rs921530125 779 dbSNP
rs1350155178 781 dbSNP
rs148568571 783 dbSNP
rs1051722815 787 dbSNP
rs1405207620 791 dbSNP
rs574093726 795 dbSNP
rs1478413798 797 dbSNP
rs1423502266 801 dbSNP
rs113936966 810 dbSNP
rs767426944 814 dbSNP
rs1489498696 822 dbSNP
rs1221024839 823 dbSNP
rs1411846581 823 dbSNP
rs544343130 825 dbSNP
rs1370933591 839 dbSNP
rs1408919904 841 dbSNP
rs343118 858 dbSNP
rs1317261687 859 dbSNP
rs1224876986 866 dbSNP
rs752535302 869 dbSNP
rs529801735 870 dbSNP
rs1433796413 875 dbSNP
rs967759598 879 dbSNP
rs978018807 882 dbSNP
rs542041930 883 dbSNP
rs1466453449 893 dbSNP
rs1400286335 895 dbSNP
rs183795492 896 dbSNP
rs1434987688 902 dbSNP
rs1342497375 920 dbSNP
rs999825522 929 dbSNP
rs990693239 939 dbSNP
rs1190849381 940 dbSNP
rs1055358850 945 dbSNP
rs1477139473 950 dbSNP
rs916363476 953 dbSNP
rs1179074549 960 dbSNP
rs1491050070 961 dbSNP
rs370495437 961 dbSNP
rs572106117 961 dbSNP
rs771149947 961 dbSNP
rs930411641 961 dbSNP
rs560476200 962 dbSNP
rs886117019 963 dbSNP
rs940390289 965 dbSNP
rs1448070796 977 dbSNP
rs866211783 977 dbSNP
rs1271724598 978 dbSNP
rs1376540543 985 dbSNP
rs111902250 987 dbSNP
rs1359847489 989 dbSNP
rs902142642 991 dbSNP
rs951244579 992 dbSNP
rs996375992 999 dbSNP
rs1004416010 1000 dbSNP
rs1183561941 1002 dbSNP
rs1168716860 1010 dbSNP
rs553213748 1013 dbSNP
rs1389718592 1014 dbSNP
rs1017039949 1030 dbSNP
rs1355228182 1031 dbSNP
rs1286296053 1036 dbSNP
rs1238904296 1039 dbSNP
rs1353469744 1049 dbSNP
rs1305254943 1053 dbSNP
rs1428895647 1054 dbSNP
rs1289374536 1055 dbSNP
rs1445995720 1058 dbSNP
rs867673814 1068 dbSNP
rs2703656 1069 dbSNP
rs566793333 1084 dbSNP
rs962761118 1092 dbSNP
rs975431664 1093 dbSNP
rs1029171267 1101 dbSNP
rs1378667683 1102 dbSNP
rs1166718926 1104 dbSNP
rs1424163431 1106 dbSNP
rs112784184 1111 dbSNP
rs1179983113 1114 dbSNP
rs1488994551 1118 dbSNP
rs1011680315 1119 dbSNP
rs1020759971 1122 dbSNP
rs1487126070 1126 dbSNP
rs1266818948 1128 dbSNP
rs967444527 1129 dbSNP
rs1322687949 1144 dbSNP
rs570328402 1145 dbSNP
rs987060625 1148 dbSNP
rs187270041 1150 dbSNP
rs945566673 1151 dbSNP
rs1298926754 1154 dbSNP
rs1399455908 1165 dbSNP
rs76939331 1166 dbSNP
rs772940592 1169 dbSNP
rs960649041 1177 dbSNP
rs990694815 1183 dbSNP
rs1367620749 1185 dbSNP
rs777593539 1194 dbSNP
rs1162627886 1197 dbSNP
rs746925285 1199 dbSNP
rs1340977892 1203 dbSNP
rs1424210147 1212 dbSNP
rs1192358636 1213 dbSNP
rs569438869 1217 dbSNP
rs984626465 1218 dbSNP
rs1489018725 1223 dbSNP
rs1489127590 1228 dbSNP
rs907640465 1241 dbSNP
rs1265801955 1242 dbSNP
rs767075554 1247 dbSNP
rs770922040 1254 dbSNP
rs370732768 1255 dbSNP
rs1189242179 1268 dbSNP
rs922907352 1278 dbSNP
rs932240508 1281 dbSNP
rs1051093757 1283 dbSNP
rs893317914 1290 dbSNP
rs1016755435 1292 dbSNP
rs1323696030 1298 dbSNP
rs1166531690 1309 dbSNP
rs1012189878 1310 dbSNP
rs1466969269 1320 dbSNP
rs1386844241 1322 dbSNP
rs1041874309 1328 dbSNP
rs903309153 1336 dbSNP
rs1378804978 1341 dbSNP
rs545309207 1346 dbSNP
rs536496394 1354 dbSNP
rs115231160 1356 dbSNP
rs1383450318 1366 dbSNP
rs1192217945 1372 dbSNP
rs190568310 1375 dbSNP
rs1459366965 1376 dbSNP
rs142067900 1378 dbSNP
rs987166395 1380 dbSNP
rs1337561219 1397 dbSNP
rs144155450 1401 dbSNP
rs1234022103 1402 dbSNP
rs1301506930 1403 dbSNP
rs182749050 1409 dbSNP
rs1317690682 1410 dbSNP
rs1021213800 1412 dbSNP
rs1377274552 1415 dbSNP
rs951978214 1416 dbSNP
rs577119817 1417 dbSNP
rs1403757722 1422 dbSNP
rs1244444703 1425 dbSNP
rs985069031 1428 dbSNP
rs1264224661 1441 dbSNP
rs1465098479 1441 dbSNP
rs1392954124 1444 dbSNP
rs907705135 1455 dbSNP
rs868156769 1456 dbSNP
rs1160013393 1463 dbSNP
rs1441945352 1471 dbSNP
rs1239123134 1472 dbSNP
rs961777289 1478 dbSNP
rs187019687 1479 dbSNP
rs544693306 1480 dbSNP
rs925442176 1482 dbSNP
rs935786808 1482 dbSNP
rs191661205 1489 dbSNP
rs1344390564 1493 dbSNP
rs556427708 1506 dbSNP
rs931620775 1511 dbSNP
rs1354175947 1516 dbSNP
rs574864880 1516 dbSNP
rs1342256068 1517 dbSNP
rs74345509 1517 dbSNP
rs887051760 1518 dbSNP
rs1394952724 1525 dbSNP
rs1299682940 1526 dbSNP
rs939902626 1526 dbSNP
rs1379275210 1534 dbSNP
rs1419890772 1534 dbSNP
rs757297604 1534 dbSNP
rs898321650 1536 dbSNP
rs560370063 1547 dbSNP
rs1370766967 1548 dbSNP
rs1028408953 1557 dbSNP
rs763281071 1566 dbSNP
rs891169690 1574 dbSNP
rs1219110867 1576 dbSNP
rs947663030 1579 dbSNP
rs1488762047 1589 dbSNP
rs1424204559 1591 dbSNP
rs1042314763 1592 dbSNP
rs113724052 1600 dbSNP
rs1358122886 1600 dbSNP
rs1458729106 1601 dbSNP
rs1002975434 1603 dbSNP
rs150383258 1605 dbSNP
rs894548905 1607 dbSNP
rs1013354487 1611 dbSNP
rs1400059656 1614 dbSNP
rs1455126326 1616 dbSNP
rs1338306561 1617 dbSNP
rs1399324085 1618 dbSNP
rs774721933 1619 dbSNP
rs1164361543 1622 dbSNP
rs1379380780 1644 dbSNP
rs1416288397 1644 dbSNP
rs1395840028 1645 dbSNP
rs1026983972 1651 dbSNP
rs1310986980 1652 dbSNP
rs1241752635 1654 dbSNP
rs113261326 1656 dbSNP
rs148784565 1661 dbSNP
rs67046428 1661 dbSNP
rs766054315 1661 dbSNP
rs201976782 1665 dbSNP
rs200548986 1666 dbSNP
rs1006102070 1672 dbSNP
rs1267657826 1676 dbSNP
rs538996874 1680 dbSNP
rs1332652610 1702 dbSNP
rs961831258 1703 dbSNP
rs959535767 1710 dbSNP
rs975817831 1717 dbSNP
rs762319775 1718 dbSNP
rs1256846548 1723 dbSNP
rs1483032803 1734 dbSNP
rs915677581 1741 dbSNP
rs531162901 1742 dbSNP
rs1392988019 1753 dbSNP
rs753410876 1759 dbSNP
rs953140193 1771 dbSNP
rs1418832929 1774 dbSNP
rs1185032642 1782 dbSNP
rs1479153961 1783 dbSNP
rs549748535 1784 dbSNP
rs779606888 1790 dbSNP
rs949817213 1794 dbSNP
rs1192840680 1801 dbSNP
rs759014432 1803 dbSNP
rs1259915471 1811 dbSNP
rs1199127280 1820 dbSNP
rs568095593 1824 dbSNP
rs1316771435 1826 dbSNP
rs182322416 1829 dbSNP
rs548395106 1833 dbSNP
rs1367926768 1842 dbSNP
rs1471335664 1847 dbSNP
rs1273865876 1852 dbSNP
rs61732100 1856 dbSNP
rs1369165862 1860 dbSNP
rs977644646 1863 dbSNP
rs1333978075 1871 dbSNP
rs534227168 1872 dbSNP
rs1354434991 1873 dbSNP
rs1168491143 1876 dbSNP
rs924785662 1887 dbSNP
rs1178217682 1889 dbSNP
rs1416231460 1912 dbSNP
rs1426224333 1913 dbSNP
rs938858163 1953 dbSNP
rs1452352798 1961 dbSNP
rs764918008 1963 dbSNP
rs752298165 1966 dbSNP
rs772696293 1967 dbSNP
rs1359420727 1976 dbSNP
rs1480291173 1982 dbSNP
rs1057300273 1983 dbSNP
rs1211687916 1987 dbSNP
rs1465212922 1991 dbSNP
rs1301513818 1994 dbSNP
rs758159468 1997 dbSNP
rs1279180422 2007 dbSNP
rs1231564257 2014 dbSNP
rs1372790430 2021 dbSNP
rs1410745702 2034 dbSNP
rs939952197 2035 dbSNP
rs187540445 2036 dbSNP
rs571119489 2038 dbSNP
rs1373325988 2039 dbSNP
rs1225477560 2040 dbSNP
rs898375349 2044 dbSNP
rs370964516 2047 dbSNP
rs868758016 2058 dbSNP
rs865885225 2060 dbSNP
rs1433046869 2062 dbSNP
rs193280713 2067 dbSNP
rs1159078938 2068 dbSNP
rs777558984 2069 dbSNP
rs1014765567 2074 dbSNP
rs897734388 2082 dbSNP
rs1183456557 2086 dbSNP
rs902520522 2087 dbSNP
rs1256148803 2089 dbSNP
rs1205544093 2099 dbSNP
rs1489096904 2099 dbSNP
rs1286271038 2100 dbSNP
rs997328254 2108 dbSNP
rs543007265 2122 dbSNP
rs1032564809 2127 dbSNP
rs1230474022 2140 dbSNP
rs953285399 2144 dbSNP
rs985867423 2146 dbSNP
rs1021713650 2155 dbSNP
rs968381930 2156 dbSNP
rs959588220 2157 dbSNP
rs116994135 2162 dbSNP
rs757278762 2174 dbSNP
rs1299026788 2178 dbSNP
rs1452794019 2179 dbSNP
rs924879127 2186 dbSNP
rs1166869200 2188 dbSNP
rs1425240680 2196 dbSNP
rs781273253 2204 dbSNP
rs938910617 2210 dbSNP
rs1478515742 2214 dbSNP
rs1432304370 2219 dbSNP
rs1263466582 2220 dbSNP
rs1204130313 2229 dbSNP
rs1485756554 2232 dbSNP
rs971202427 2234 dbSNP
rs1173522331 2235 dbSNP
rs1391570375 2240 dbSNP
rs1336169511 2241 dbSNP
rs993028902 2243 dbSNP
rs1307776323 2249 dbSNP
rs1342375482 2251 dbSNP
rs981588581 2253 dbSNP
rs1381824444 2254 dbSNP
rs1360096038 2258 dbSNP
rs1295120738 2264 dbSNP
rs1395338938 2271 dbSNP
rs1458211080 2273 dbSNP
rs1369299776 2277 dbSNP
rs1162627242 2281 dbSNP
rs908245122 2281 dbSNP
rs1423657665 2289 dbSNP
rs745987729 2306 dbSNP
rs1192057839 2311 dbSNP
rs1294266281 2315 dbSNP
rs1426408454 2316 dbSNP
rs1268989956 2317 dbSNP
rs1193342680 2330 dbSNP
rs1469183764 2331 dbSNP
rs1252925306 2337 dbSNP
rs1212300513 2348 dbSNP
rs1320134226 2349 dbSNP
rs1252006989 2350 dbSNP
rs961032382 2353 dbSNP
rs1367007265 2365 dbSNP
rs1306043685 2380 dbSNP
rs1217492590 2387 dbSNP
rs1298030879 2389 dbSNP
rs916045614 2393 dbSNP
rs185639992 2399 dbSNP
rs1228915584 2401 dbSNP
rs1048450533 2404 dbSNP
rs919852994 2407 dbSNP
rs932532183 2412 dbSNP
rs888458443 2414 dbSNP
rs776121141 2420 dbSNP
rs912372151 2423 dbSNP
rs780450745 2443 dbSNP
rs1340034422 2449 dbSNP
rs1460011368 2458 dbSNP
rs1379075048 2465 dbSNP
rs1223668228 2471 dbSNP
rs1176248641 2472 dbSNP
rs897788111 2481 dbSNP
rs944175041 2481 dbSNP
rs1247144107 2486 dbSNP
rs535927070 2488 dbSNP
rs997382172 2492 dbSNP
rs1459518025 2494 dbSNP
rs749489970 2496 dbSNP
rs1188911258 2498 dbSNP
rs538239458 2505 dbSNP
rs1249552686 2508 dbSNP
rs1479661943 2519 dbSNP
rs768927404 2526 dbSNP
rs888917469 2535 dbSNP
rs1168413546 2540 dbSNP
rs1346917388 2554 dbSNP
rs1388706839 2557 dbSNP
rs1053689541 2564 dbSNP
rs1242019871 2565 dbSNP
rs73117988 2566 dbSNP
rs1021400420 2572 dbSNP
rs968854198 2573 dbSNP
rs1012898193 2581 dbSNP
rs762054892 2584 dbSNP
rs1166131510 2587 dbSNP
rs572230977 2588 dbSNP
rs1031333896 2594 dbSNP
rs368778203 2596 dbSNP
rs1441927434 2605 dbSNP
rs1364887541 2606 dbSNP
rs1434437927 2607 dbSNP
rs1417432285 2608 dbSNP
rs564271700 2612 dbSNP
rs960284805 2615 dbSNP
rs993040316 2619 dbSNP
rs916082026 2620 dbSNP
rs1485493597 2630 dbSNP
rs1434625417 2631 dbSNP
rs1296683802 2638 dbSNP
rs1359611418 2646 dbSNP
rs576277825 2649 dbSNP
rs1218601940 2650 dbSNP
rs1229761116 2656 dbSNP
rs984682057 2662 dbSNP
rs1236732214 2663 dbSNP
rs543077883 2665 dbSNP
rs1341778353 2667 dbSNP
rs1290534230 2677 dbSNP
rs1293426439 2685 dbSNP
rs1321017716 2696 dbSNP
rs909992013 2698 dbSNP
rs1299584034 2703 dbSNP
rs940107028 2715 dbSNP
rs1386075731 2719 dbSNP
rs1158532402 2722 dbSNP
rs1218806381 2724 dbSNP
rs34786494 2724 dbSNP
rs1469086224 2725 dbSNP
rs919574506 2727 dbSNP
rs528882918 2731 dbSNP
rs1474917758 2736 dbSNP
rs985778779 2739 dbSNP
rs1196039917 2771 dbSNP
rs1465121205 2778 dbSNP
rs1187549399 2781 dbSNP
rs1245761118 2793 dbSNP
rs1283246802 2799 dbSNP
rs922572853 2806 dbSNP
rs1358458297 2810 dbSNP
rs1273736617 2812 dbSNP
rs386689015 2812 dbSNP
rs343117 2813 dbSNP
rs56060970 2814 dbSNP
rs1404070130 2828 dbSNP
rs1279725442 2830 dbSNP
rs1430964344 2831 dbSNP
rs343116 2841 dbSNP
rs1007413448 2846 dbSNP
rs1318124462 2848 dbSNP
rs924045094 2851 dbSNP
rs560314061 2857 dbSNP
rs936738485 2868 dbSNP
rs1456711536 2872 dbSNP
rs1460997347 2876 dbSNP
rs1318799614 2879 dbSNP
rs879460870 2906 dbSNP
rs1475887315 2910 dbSNP
rs527925180 2914 dbSNP
rs764660497 2932 dbSNP
rs998570940 2943 dbSNP
rs1031343714 2945 dbSNP
rs1469596034 2953 dbSNP
rs1253564195 2960 dbSNP
rs552726273 2963 dbSNP
rs1284548691 2966 dbSNP
rs1012542770 2968 dbSNP
rs1047090396 2972 dbSNP
rs571091395 2976 dbSNP
rs1338406712 2977 dbSNP
rs1014527374 2979 dbSNP
rs1429065131 2980 dbSNP
rs1373568396 2984 dbSNP
rs752323642 2986 dbSNP
rs1392879472 2989 dbSNP
rs1378422691 2991 dbSNP
rs970698282 3002 dbSNP
rs113424557 3003 dbSNP
rs549931893 3008 dbSNP
rs1410601590 3026 dbSNP
rs1005475959 3027 dbSNP
rs770482601 3028 dbSNP
rs910035210 3031 dbSNP
rs961450449 3034 dbSNP
rs762616009 3038 dbSNP
rs879737822 3041 dbSNP
rs879862856 3047 dbSNP
rs1207502780 3049 dbSNP
rs528273811 3050 dbSNP
rs1467123697 3053 dbSNP
rs1050170890 3056 dbSNP
rs751408596 3062 dbSNP
rs1204683054 3070 dbSNP
rs1026685405 3072 dbSNP
rs910507633 3083 dbSNP
rs985108890 3085 dbSNP
rs757110486 3086 dbSNP
rs1237247321 3087 dbSNP
rs1472131819 3088 dbSNP
rs1184976595 3097 dbSNP
rs1413267731 3101 dbSNP
rs943271688 3104 dbSNP
rs1042901955 3106 dbSNP
rs904316269 3107 dbSNP
rs1300349324 3108 dbSNP
rs998623452 3110 dbSNP
rs1443040988 3111 dbSNP
rs1156980664 3113 dbSNP
rs1353963491 3116 dbSNP
rs1327144330 3121 dbSNP
rs1436864100 3127 dbSNP
rs767617486 3131 dbSNP
rs1172840711 3140 dbSNP
rs1019962459 3142 dbSNP
rs965299138 3144 dbSNP
rs1177652574 3145 dbSNP
rs1469199762 3149 dbSNP
rs1230634424 3165 dbSNP
rs343115 3166 dbSNP
rs1013945624 3168 dbSNP
rs1412642001 3171 dbSNP
rs149098410 3188 dbSNP
rs1310752893 3189 dbSNP
rs1350993355 3190 dbSNP
rs372156721 3196 dbSNP
rs756297497 3197 dbSNP
rs916632880 3200 dbSNP
rs539297621 3201 dbSNP
rs867114662 3212 dbSNP
rs557911585 3232 dbSNP
rs1017106326 3241 dbSNP
rs1416680312 3244 dbSNP
rs1356419432 3247 dbSNP
rs1346753012 3261 dbSNP
rs1432648007 3263 dbSNP
rs1219440967 3270 dbSNP
rs1277390939 3282 dbSNP
rs1484903222 3284 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000296792.4 | 3UTR | AAAGGAGCAAAGCCUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
180 hsa-miR-4524a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055251 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT055826 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT060573 CCND1 cyclin D1 2 2
MIRT061013 C1ORF21 chromosome 1 open reading frame 21 2 6
MIRT064694 CCND2 cyclin D2 2 4
MIRT075268 SNTB2 syntrophin beta 2 2 4
MIRT079668 NAPG NSF attachment protein gamma 2 12
MIRT081651 CCNE1 cyclin E1 2 4
MIRT082996 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT083463 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 2 4
MIRT085755 RIF1 replication timing regulatory factor 1 2 2
MIRT086022 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 2
MIRT087431 ZNRF3 zinc and ring finger 3 2 2
MIRT088786 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT089221 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT093696 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 6
MIRT095090 SEC24A SEC24 homolog A, COPII coat complex component 2 4
MIRT096249 CANX calnexin 2 2
MIRT100215 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT100746 VEGFA vascular endothelial growth factor A 2 12
MIRT100904 CD2AP CD2 associated protein 2 2
MIRT102647 UBN2 ubinuclein 2 2 10
MIRT103882 FOXK1 forkhead box K1 2 2
MIRT104246 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT106310 ZFHX4 zinc finger homeobox 4 2 6
MIRT107696 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT114943 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT117671 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT133799 SKI SKI proto-oncogene 2 2
MIRT140167 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT142279 DCTN5 dynactin subunit 5 2 8
MIRT143288 N4BP1 NEDD4 binding protein 1 2 2
MIRT165939 CREBRF CREB3 regulatory factor 2 2
MIRT175251 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT186381 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT191470 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 2 2
MIRT196480 TAOK1 TAO kinase 1 2 2
MIRT201470 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT204615 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT204646 MOB4 MOB family member 4, phocein 2 8
MIRT204749 BZW1 basic leucine zipper and W2 domains 1 2 12
MIRT206031 NUP50 nucleoporin 50 2 6
MIRT211196 FGF2 fibroblast growth factor 2 2 4
MIRT229353 ZNF449 zinc finger protein 449 2 2
MIRT247138 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT249461 ZNF691 zinc finger protein 691 2 4
MIRT256314 CDC42SE2 CDC42 small effector 2 2 2
MIRT258419 WIPI2 WD repeat domain, phosphoinositide interacting 2 2 2
MIRT265083 CHEK1 checkpoint kinase 1 2 2
MIRT270561 SETD1B SET domain containing 1B 2 2
MIRT274749 RAB3IP RAB3A interacting protein 2 2
MIRT277515 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 4
MIRT289642 CBX2 chromobox 2 2 2
MIRT301001 MTMR3 myotubularin related protein 3 2 2
MIRT307149 CTDSPL CTD small phosphatase like 2 4
MIRT309021 USP53 ubiquitin specific peptidase 53 2 2
MIRT314100 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 8
MIRT319338 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT320619 ZNRF2 zinc and ring finger 2 2 2
MIRT324285 LURAP1L leucine rich adaptor protein 1 like 2 2
MIRT446498 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT448437 TLL1 tolloid like 1 2 2
MIRT461537 ACTR3B ARP3 actin related protein 3 homolog B 2 2
MIRT463162 ZNF367 zinc finger protein 367 2 10
MIRT463493 ZC3H10 zinc finger CCCH-type containing 10 2 2
MIRT465154 TSC22D2 TSC22 domain family member 2 2 2
MIRT466418 TFAP2A transcription factor AP-2 alpha 2 8
MIRT468278 SFT2D2 SFT2 domain containing 2 2 2
MIRT469399 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT471941 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT473688 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT479618 CDC25A cell division cycle 25A 2 2
MIRT482098 AKT3 AKT serine/threonine kinase 3 2 4
MIRT483995 ATAD5 ATPase family, AAA domain containing 5 2 12
MIRT485205 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 8
MIRT498763 C3orf38 chromosome 3 open reading frame 38 2 8
MIRT498961 ORC4 origin recognition complex subunit 4 2 8
MIRT499440 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT500080 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 8
MIRT500305 ZNF622 zinc finger protein 622 2 8
MIRT500410 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500789 TLK1 tousled like kinase 1 2 6
MIRT500930 SRPR SRP receptor alpha subunit 2 6
MIRT500943 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 2 8
MIRT501068 SMAD7 SMAD family member 7 2 8
MIRT501711 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT502627 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT502910 CDCA4 cell division cycle associated 4 2 8
MIRT502935 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504531 ZNF620 zinc finger protein 620 2 6
MIRT505106 YTHDC1 YTH domain containing 1 2 6
MIRT505337 TMEM245 transmembrane protein 245 2 6
MIRT505383 TMEM100 transmembrane protein 100 2 2
MIRT505678 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT506157 PLAG1 PLAG1 zinc finger 2 8
MIRT506183 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 6
MIRT506475 MYO5A myosin VA 2 6
MIRT506826 KIF23 kinesin family member 23 2 6
MIRT507160 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT507511 DYNLL2 dynein light chain LC8-type 2 2 4
MIRT507845 CCNE2 cyclin E2 2 6
MIRT510403 ZNF507 zinc finger protein 507 2 2
MIRT518078 TRIM35 tripartite motif containing 35 2 2
MIRT518982 NNT nicotinamide nucleotide transhydrogenase 2 4
MIRT521045 SLC2A3 solute carrier family 2 member 3 2 4
MIRT521190 SBNO1 strawberry notch homolog 1 2 6
MIRT522088 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT524846 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT527787 TMEM44 transmembrane protein 44 2 4
MIRT537803 EFNB2 ephrin B2 2 4
MIRT540830 GNAT1 G protein subunit alpha transducin 1 2 4
MIRT541140 PISD phosphatidylserine decarboxylase 2 2
MIRT541419 CBX4 chromobox 4 2 2
MIRT543517 PRSS21 protease, serine 21 2 2
MIRT543824 GSG1 germ cell associated 1 2 2
MIRT544959 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT545179 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 4
MIRT545335 CCDC83 coiled-coil domain containing 83 2 2
MIRT545518 RSL24D1 ribosomal L24 domain containing 1 2 2
MIRT545670 DECR1 2,4-dienoyl-CoA reductase 1 2 2
MIRT545931 ZBTB44 zinc finger and BTB domain containing 44 2 4
MIRT546102 USP48 ubiquitin specific peptidase 48 2 4
MIRT546598 SALL1 spalt like transcription factor 1 2 4
MIRT546626 RTN4 reticulon 4 2 2
MIRT547651 KPNA3 karyopherin subunit alpha 3 2 2
MIRT547987 HCFC2 host cell factor C2 2 4
MIRT548717 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT548931 CDK17 cyclin dependent kinase 17 2 2
MIRT549067 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT549266 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT550460 OSCAR osteoclast associated, immunoglobulin-like receptor 2 4
MIRT550806 FAM229B family with sequence similarity 229 member B 2 2
MIRT552024 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552334 ZNF704 zinc finger protein 704 2 2
MIRT552732 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT553795 SZRD1 SUZ RNA binding domain containing 1 2 4
MIRT554694 RNF149 ring finger protein 149 2 2
MIRT555133 PTPRD protein tyrosine phosphatase, receptor type D 2 2
MIRT555264 PRDM4 PR/SET domain 4 2 2
MIRT556848 KANK1 KN motif and ankyrin repeat domains 1 2 4
MIRT557474 GPR27 G protein-coupled receptor 27 2 4
MIRT558018 EXT1 exostosin glycosyltransferase 1 2 2
MIRT558498 CYP26B1 cytochrome P450 family 26 subfamily B member 1 2 4
MIRT558579 CREBL2 cAMP responsive element binding protein like 2 2 4
MIRT558610 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT558650 CNKSR3 CNKSR family member 3 2 2
MIRT558986 CA8 carbonic anhydrase 8 2 2
MIRT559141 BTN3A3 butyrophilin subfamily 3 member A3 2 2
MIRT559327 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 2
MIRT562021 LANCL1 LanC like 1 2 2
MIRT562869 KIAA1456 KIAA1456 2 2
MIRT563074 SLC25A12 solute carrier family 25 member 12 2 2
MIRT563496 DLGAP3 DLG associated protein 3 2 2
MIRT563890 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 2
MIRT564311 CCNT1 cyclin T1 2 2
MIRT564942 XKR7 XK related 7 2 2
MIRT564979 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT565423 TEF TEF, PAR bZIP transcription factor 2 2
MIRT566824 MAP3K7 mitogen-activated protein kinase kinase kinase 7 2 2
MIRT571961 KIF5B kinesin family member 5B 2 2
MIRT575877 Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2 3
MIRT576523 Txlna taxilin alpha 2 2
MIRT614693 TRAK1 trafficking kinesin protein 1 2 2
MIRT616065 ZC3H14 zinc finger CCCH-type containing 14 2 2
MIRT618838 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT624626 ATXN2 ataxin 2 2 2
MIRT624652 ASAH2 N-acylsphingosine amidohydrolase 2 2 2
MIRT640314 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT659248 CUL3 cullin 3 2 2
MIRT680972 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT682261 RS1 retinoschisin 1 2 2
MIRT682505 GLP2R glucagon like peptide 2 receptor 2 2
MIRT693904 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT699214 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT699373 SLC30A6 solute carrier family 30 member 6 2 2
MIRT699451 SLC16A9 solute carrier family 16 member 9 2 2
MIRT701230 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT702849 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT706163 CASK calcium/calmodulin dependent serine protein kinase 2 3
MIRT718990 UTP15 UTP15, small subunit processome component 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4524a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4524a-5p Cetuximab resistant tissue (colorectal carcinoma)

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